Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30879
(759 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 167 6e-42
AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 167 6e-42
Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical pr... 99 2e-21
S56051-1|AAB25489.2| 147|Caenorhabditis elegans ubiquitin-conju... 99 2e-21
AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin co... 91 8e-19
Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical p... 79 3e-15
AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin co... 78 8e-15
AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical... 77 1e-14
AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin co... 75 4e-14
AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin con... 70 2e-12
U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin conju... 70 2e-12
AF106565-1|AAC97374.1| 166|Caenorhabditis elegans ubiquitin-con... 70 2e-12
U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin conju... 66 3e-11
U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin conju... 65 6e-11
U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin conju... 64 8e-11
AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical ... 61 7e-10
U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin conju... 60 2e-09
Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical pr... 56 3e-08
AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin con... 55 6e-08
Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical pr... 54 1e-07
U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2 (c... 51 1e-06
AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin con... 51 1e-06
Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical pr... 42 4e-04
U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin conju... 41 8e-04
U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin conju... 40 0.003
AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical... 33 0.22
Z98877-7|CAB63403.1| 292|Caenorhabditis elegans Hypothetical pr... 32 0.51
AL132952-10|CAB63384.1| 591|Caenorhabditis elegans Hypothetical... 30 1.6
AC006680-5|AAK72301.2| 300|Caenorhabditis elegans Serpentine re... 30 2.1
Z34802-3|CAA84333.1| 354|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z78546-6|CAB54307.1| 642|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z78545-5|CAB01764.2| 642|Caenorhabditis elegans Hypothetical pr... 28 6.3
AF016445-2|AAC69064.1| 376|Caenorhabditis elegans Serpentine re... 28 6.3
Z78542-2|CAB01744.2| 641|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z54236-10|CAA90986.1| 407|Caenorhabditis elegans Hypothetical p... 28 8.3
Z54235-12|CAA90977.1| 407|Caenorhabditis elegans Hypothetical p... 28 8.3
AF125445-1|AAD12803.2| 550|Caenorhabditis elegans Hypothetical ... 28 8.3
>U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein.
Length = 192
Score = 167 bits (407), Expect = 6e-42
Identities = 70/85 (82%), Positives = 81/85 (95%)
Frame = +3
Query: 252 SPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGG 431
+PT++NI+ W A+IFGP +TPFEDGTFKL++EFTEEYPNKPPTV+F+SKMFHPNVYADG
Sbjct: 27 APTEDNILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNKPPTVKFISKMFHPNVYADGS 86
Query: 432 ICLDILQNRWSPTYDVSAILTSIQS 506
ICLDILQNRWSPTYDV+AILTSIQS
Sbjct: 87 ICLDILQNRWSPTYDVAAILTSIQS 111
Score = 68.1 bits (159), Expect = 6e-12
Identities = 29/40 (72%), Positives = 37/40 (92%)
Frame = +2
Query: 506 ILSDPNPNSPANSMAAQLYKENRREYEKRVKACVEQSFID 625
+L +PNPNSPANS+AAQLY+ENRREYEKRV+ VEQS+++
Sbjct: 112 LLDEPNPNSPANSLAAQLYQENRREYEKRVQQIVEQSWLN 151
Score = 54.4 bits (125), Expect = 8e-08
Identities = 23/27 (85%), Positives = 26/27 (96%)
Frame = +1
Query: 175 MSTPARRRLMRDFKRLQEDPPTGVSGA 255
M+TP+RRRLMRDFK+LQEDPP GVSGA
Sbjct: 1 MTTPSRRRLMRDFKKLQEDPPAGVSGA 27
>AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein1 protein.
Length = 192
Score = 167 bits (407), Expect = 6e-42
Identities = 70/85 (82%), Positives = 81/85 (95%)
Frame = +3
Query: 252 SPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGG 431
+PT++NI+ W A+IFGP +TPFEDGTFKL++EFTEEYPNKPPTV+F+SKMFHPNVYADG
Sbjct: 27 APTEDNILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNKPPTVKFISKMFHPNVYADGS 86
Query: 432 ICLDILQNRWSPTYDVSAILTSIQS 506
ICLDILQNRWSPTYDV+AILTSIQS
Sbjct: 87 ICLDILQNRWSPTYDVAAILTSIQS 111
Score = 68.1 bits (159), Expect = 6e-12
Identities = 29/40 (72%), Positives = 37/40 (92%)
Frame = +2
Query: 506 ILSDPNPNSPANSMAAQLYKENRREYEKRVKACVEQSFID 625
+L +PNPNSPANS+AAQLY+ENRREYEKRV+ VEQS+++
Sbjct: 112 LLDEPNPNSPANSLAAQLYQENRREYEKRVQQIVEQSWLN 151
Score = 54.4 bits (125), Expect = 8e-08
Identities = 23/27 (85%), Positives = 26/27 (96%)
Frame = +1
Query: 175 MSTPARRRLMRDFKRLQEDPPTGVSGA 255
M+TP+RRRLMRDFK+LQEDPP GVSGA
Sbjct: 1 MTTPSRRRLMRDFKKLQEDPPAGVSGA 27
>Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical
protein M7.1 protein.
Length = 147
Score = 99 bits (238), Expect = 2e-21
Identities = 41/96 (42%), Positives = 62/96 (64%)
Frame = +3
Query: 219 LTRGSTYRCVRSPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSK 398
L R +C P +++ W A I GP ++P++ G F LTI F +YP KPP V F ++
Sbjct: 13 LGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTR 72
Query: 399 MFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQS 506
++HPN+ ++G ICLDIL+++WSP +S +L SI S
Sbjct: 73 IYHPNINSNGSICLDILRSQWSPALTISKVLLSICS 108
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 506 ILSDPNPNSPANSMAAQLYKENRREYEK 589
+L DPNP+ P A++YK +R Y +
Sbjct: 109 LLCDPNPDDPLVPEIARIYKTDRERYNQ 136
>S56051-1|AAB25489.2| 147|Caenorhabditis elegans
ubiquitin-conjugating enzyme protein.
Length = 147
Score = 99 bits (238), Expect = 2e-21
Identities = 41/96 (42%), Positives = 62/96 (64%)
Frame = +3
Query: 219 LTRGSTYRCVRSPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSK 398
L R +C P +++ W A I GP ++P++ G F LTI F +YP KPP V F ++
Sbjct: 13 LGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTR 72
Query: 399 MFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQS 506
++HPN+ ++G ICLDIL+++WSP +S +L SI S
Sbjct: 73 IYHPNINSNGSICLDILRSQWSPALTISKVLLSICS 108
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 506 ILSDPNPNSPANSMAAQLYKENRREYEK 589
+L DPNP+ P A++YK +R Y +
Sbjct: 109 LLCDPNPDDPLVPEIARIYKTDRERYNQ 136
>AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein13 protein.
Length = 151
Score = 91.1 bits (216), Expect = 8e-19
Identities = 38/85 (44%), Positives = 57/85 (67%)
Frame = +3
Query: 252 SPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGG 431
+P ++N ++ +I GP D+PF G FKL + EEYP P VRF++K++HPN+ G
Sbjct: 27 NPDESNARYFHVMIAGPDDSPFAGGVFKLELFLPEEYPMAAPKVRFMTKIYHPNIDKLGR 86
Query: 432 ICLDILQNRWSPTYDVSAILTSIQS 506
ICLDIL+++WSP + +L SIQ+
Sbjct: 87 ICLDILKDKWSPALQIRTVLLSIQA 111
>Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical
protein F58A4.10 protein.
Length = 164
Score = 79.4 bits (187), Expect = 3e-15
Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 13/95 (13%)
Frame = +3
Query: 261 DNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGGICL 440
DN+I W ++ GP DT +E G FK ++F +YP KPP ++F+S+++HPN+ +G +C+
Sbjct: 30 DNDIYKWEVLVIGPPDTLYEGGFFKAILDFPRDYPQKPPKMKFISEIWHPNIDKEGNVCI 89
Query: 441 DIL-------------QNRWSPTYDVSAILTSIQS 506
IL + RW P + V IL S+ S
Sbjct: 90 SILHDPGDDKWGYERPEERWLPVHTVETILLSVIS 124
Score = 41.5 bits (93), Expect = 6e-04
Identities = 18/37 (48%), Positives = 27/37 (72%)
Frame = +2
Query: 506 ILSDPNPNSPANSMAAQLYKENRREYEKRVKACVEQS 616
+L+DPN SPAN AA++ +EN E++K+V CV +S
Sbjct: 125 MLTDPNFESPANVDAAKMQRENYAEFKKKVAQCVRRS 161
>AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein3 protein.
Length = 243
Score = 77.8 bits (183), Expect = 8e-15
Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 13/95 (13%)
Frame = +3
Query: 261 DNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGGICL 440
++N+ +W I+GP T ++ G FK +I F YP PP+++F +K++HPNVY +G +C+
Sbjct: 36 EDNLFVWTVGIYGPPKTLYQGGYFKASIRFPSNYPYSPPSMKFTTKVWHPNVYENGDLCI 95
Query: 441 DILQN-------------RWSPTYDVSAILTSIQS 506
IL + RW+PT V IL S+ S
Sbjct: 96 SILHSPIDDPQSGELACERWNPTQSVRTILLSVIS 130
Score = 28.7 bits (61), Expect = 4.7
Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 4/41 (9%)
Frame = +2
Query: 506 ILSDPNPNSPANSMAAQLY---KENR-REYEKRVKACVEQS 616
+L++PN +SPAN A+ +Y KE++ EY K V VE+S
Sbjct: 131 LLNEPNTSSPANVDASVMYRKWKEDQDPEYAKIVTKQVEES 171
>AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical
protein Y87G2A.9 protein.
Length = 170
Score = 77.4 bits (182), Expect = 1e-14
Identities = 38/101 (37%), Positives = 53/101 (52%), Gaps = 14/101 (13%)
Frame = +3
Query: 246 VRSPTD-NNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYA 422
+ +P D +N W +I GP +T F +G F I F ++YP PP +RF +FHPN+YA
Sbjct: 25 IAAPIDEDNFFEWECLITGPEETCFANGVFPARITFPQDYPLSPPKMRFTCGIFHPNIYA 84
Query: 423 DGGICLDIL-------------QNRWSPTYDVSAILTSIQS 506
DG +C+ IL RWSP + IL S+ S
Sbjct: 85 DGRVCISILHAPGDDPTGYELSNERWSPVQSIEKILLSVVS 125
Score = 36.3 bits (80), Expect = 0.024
Identities = 14/37 (37%), Positives = 27/37 (72%)
Frame = +2
Query: 506 ILSDPNPNSPANSMAAQLYKENRREYEKRVKACVEQS 616
+L++PN SPAN AA++++E+R ++EK + V ++
Sbjct: 126 MLAEPNDESPANVSAAKMWREDRAQFEKIADSLVRKT 162
>AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein20 protein.
Length = 199
Score = 75.4 bits (177), Expect = 4e-14
Identities = 34/78 (43%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Frame = +3
Query: 291 IFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGG-ICLDILQNRWSP 467
I GP DTP+ G F L I+ ++YP PP V+F +K++HPNV + G ICLDIL+++W+
Sbjct: 43 IRGPPDTPYAGGMFDLDIKIPDQYPFSPPNVKFSTKIWHPNVSSQTGVICLDILKDQWAA 102
Query: 468 TYDVSAILTSIQSF*VIP 521
+ + +L SIQ+ P
Sbjct: 103 SLTLRTVLLSIQALMCTP 120
>AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein8 protein.
Length = 221
Score = 70.1 bits (164), Expect = 2e-12
Identities = 25/65 (38%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Frame = +3
Query: 297 GPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNV-YADGGICLDILQNRWSPTY 473
GP DT +E+G +++ ++ ++YP K P++ F++K+FHPN+ A G +CLD++ W+ Y
Sbjct: 41 GPKDTAYENGVWRIRVDMPDKYPFKSPSIGFLNKIFHPNIDEASGTVCLDVINQAWTALY 100
Query: 474 DVSAI 488
D++ I
Sbjct: 101 DLTNI 105
>U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein9 protein.
Length = 166
Score = 69.7 bits (163), Expect = 2e-12
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Frame = +3
Query: 267 NIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGGICLDI 446
N+ W I G DT +E G +++ + F +++P+ PP +F +FHPNVY G +CL +
Sbjct: 37 NLFNWECAIPGRKDTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSL 96
Query: 447 L-QNR-WSPTYDVSAILTSIQ 503
L +N+ W P+ + +L IQ
Sbjct: 97 LDENKDWKPSISIKQLLIGIQ 117
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +2
Query: 506 ILSDPNPNSPANSMAAQLYKENRREYEKRVK 598
+L+ PN PA + A Q+Y +NR EYEKRVK
Sbjct: 119 LLNHPNIEDPAQAEAYQIYCQNRAEYEKRVK 149
>AF106565-1|AAC97374.1| 166|Caenorhabditis elegans
ubiquitin-conjugating enzyme 9homolog protein.
Length = 166
Score = 69.7 bits (163), Expect = 2e-12
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Frame = +3
Query: 267 NIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGGICLDI 446
N+ W I G DT +E G +++ + F +++P+ PP +F +FHPNVY G +CL +
Sbjct: 37 NLFNWECAIPGRKDTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSL 96
Query: 447 L-QNR-WSPTYDVSAILTSIQ 503
L +N+ W P+ + +L IQ
Sbjct: 97 LDENKDWKPSISIKQLLIGIQ 117
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +2
Query: 506 ILSDPNPNSPANSMAAQLYKENRREYEKRVK 598
+L+ PN PA + A Q+Y +NR EYEKRVK
Sbjct: 119 LLNHPNIEDPAQAEAYQIYCQNRAEYEKRVK 149
>U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein21 protein.
Length = 229
Score = 66.1 bits (154), Expect = 3e-11
Identities = 33/98 (33%), Positives = 57/98 (58%), Gaps = 16/98 (16%)
Frame = +3
Query: 261 DNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTV---------------RFVS 395
+NN+M I GP TP+ GTF++ ++ E YP +PP V +FV+
Sbjct: 47 ENNLMDIKGFIKGPEGTPYAGGTFEIKVDIPEHYPFEPPKVTEIIFHIRAFEYIQAKFVT 106
Query: 396 KMFHPNVYAD-GGICLDILQNRWSPTYDVSAILTSIQS 506
+++HPN+ + G ICLDIL+++W+ + + +L S+Q+
Sbjct: 107 RIWHPNISSQTGTICLDILKDKWTASLTLRTVLLSLQA 144
>U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein23 protein.
Length = 546
Score = 64.9 bits (151), Expect = 6e-11
Identities = 32/76 (42%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
Frame = +3
Query: 288 VIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYA-DGGICL-DILQNRW 461
+I G +TP+E G F+L I+ E YP K PTV+F++K++HP+V DG ICL D+ W
Sbjct: 384 IIKGVEETPYEGGIFELDIKIGESYPFKAPTVKFITKIWHPSVSPFDGTICLHDVDNGVW 443
Query: 462 SPTYDVSAILTSIQSF 509
+ + +L IQS+
Sbjct: 444 PVSMTIYKVLIVIQSW 459
>U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein18 protein.
Length = 153
Score = 64.5 bits (150), Expect = 8e-11
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +3
Query: 261 DNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGGICL 440
+ N++ W ++ P P+ G FK+ I F +YP KPP V F +K++HPNV +G CL
Sbjct: 29 ETNLLKWTVLLI-PDKEPYNKGAFKVGITFPVDYPFKPPKVAFETKIYHPNVDEEGKFCL 87
Query: 441 DIL-QNRWSPTYDVSAILTSIQS 506
I+ W P ++ ++ S
Sbjct: 88 PIVTAENWKPATKTEQVMMALLS 110
>AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical
protein Y54E5B.4 protein.
Length = 152
Score = 61.3 bits (142), Expect = 7e-10
Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Frame = +3
Query: 258 TDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMF--HPNVYADGG 431
T N++ W + G T + F L F +YP P V FV + HP++Y++G
Sbjct: 31 TSNDLKQWKIGVVGAEGTLYAGEVFMLQFTFGPQYPFNSPEVMFVGETIPAHPHIYSNGH 90
Query: 432 ICLDILQNRWSPTYDVSAILTSIQS 506
ICL IL + W+P V ++ SI S
Sbjct: 91 ICLSILSDDWTPALSVQSVCLSILS 115
>U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein17 protein.
Length = 679
Score = 59.7 bits (138), Expect = 2e-09
Identities = 33/93 (35%), Positives = 48/93 (51%), Gaps = 12/93 (12%)
Frame = +3
Query: 261 DNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSK-----MFHPNVYAD 425
+ + I +I GP DTP+ +G F+ I F YP PP F++ F+PN+Y D
Sbjct: 439 EGRVDIIKVLISGPDDTPYANGLFEFDIFFPTGYPFSPPKCAFLTTGSGNVRFNPNLYND 498
Query: 426 GGICLDIL-------QNRWSPTYDVSAILTSIQ 503
G ICL IL + +W+P + +L SIQ
Sbjct: 499 GKICLSILGTWEGRPEEKWNPYCSLMQVLVSIQ 531
>Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical
protein F39B2.2 protein.
Length = 139
Score = 56.0 bits (129), Expect = 3e-08
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Frame = +3
Query: 258 TDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGGIC 437
+D + W A I GP TP+E + L I+ YP +PPTVRF +K+ V G+
Sbjct: 34 SDMTLTRWTASIIGPPRTPYESRIYNLQIQCGGNYPREPPTVRFTTKVHMVGVNQSNGVI 93
Query: 438 ----LDILQNRWSPTYDVSAILTSIQ 503
L L+N WS +Y + +L I+
Sbjct: 94 DKRNLTTLRN-WSNSYMIKTVLEDIR 118
>AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein26 protein.
Length = 203
Score = 54.8 bits (126), Expect = 6e-08
Identities = 26/89 (29%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Frame = +3
Query: 252 SPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGG 431
+P + NI+ W +I G TP+E G + + F +++P KPP + ++ + +
Sbjct: 31 APLETNILEWRYIIIGAPKTPYEGGIYMGKLLFPKDFPFKPPAILMLTP--NGRFQTNTR 88
Query: 432 ICLDILQ---NRWSPTYDVSAILTSIQSF 509
+CL I + W+P + VS I+T + SF
Sbjct: 89 LCLSISDYHPDTWNPAWTVSTIITGLMSF 117
>Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical
protein R09B3.4 protein.
Length = 180
Score = 54.0 bits (124), Expect = 1e-07
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 6/75 (8%)
Frame = +3
Query: 300 PHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGGICLDIL------QNRW 461
P + + G F+ I EY N PP V+ ++K++HPN+ DG ICL IL Q W
Sbjct: 67 PQEGIYRGGKFRFKITVPPEYNNVPPVVKCLTKVWHPNINEDGSICLSILRQNSLDQYGW 126
Query: 462 SPTYDVSAILTSIQS 506
PT +++ ++ + S
Sbjct: 127 RPTRNLTDVVHGLVS 141
>U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2
(conjugating enzyme)variant protein 2 protein.
Length = 230
Score = 50.8 bits (116), Expect = 1e-06
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Frame = +3
Query: 279 WNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGGICLDIL-QN 455
W + GP +P+E G +++++ F ++P PP F + + HPNV G I L +L Q
Sbjct: 71 WICTVPGPRGSPWEGGEYEVSVNF-HKWPIIPPICEFKTPLHHPNVDLRGSIYLKMLEQE 129
Query: 456 RWSPTYDVSAILTSIQSF*VIPTQT 530
WS + +L I + P T
Sbjct: 130 HWSSETSLKKLLREISNLLATPDLT 154
>AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein15 protein.
Length = 218
Score = 50.8 bits (116), Expect = 1e-06
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Frame = +3
Query: 255 PTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGGI 434
P ++NI+ W+ + G DTPF G + + F E +P PP + ++ + + +
Sbjct: 43 PNEDNILEWHYCLRGSPDTPFYGGYYWGKVIFKENFPWSPPAITMITP--NGRFQTNTRL 100
Query: 435 CLDILQ---NRWSPTYDVSAILTSIQSF 509
CL I W+P + VSAIL + SF
Sbjct: 101 CLSISDYHPESWNPGWTVSAILIGLHSF 128
>Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical
protein F49E12.4 protein.
Length = 160
Score = 42.3 bits (95), Expect = 4e-04
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +3
Query: 315 FEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNV-YADGGICLD-ILQNRWSPTYDVSAI 488
+++ F LT++ EYP KPP ++F ++HPNV +C +LQ W P + +
Sbjct: 57 YKNMIFTLTLDVNVEYPFKPPYLKFCHNVYHPNVDPVTCELCSPMLLQENWKPETTMEDV 116
Query: 489 LTSI 500
L ++
Sbjct: 117 LLNL 120
>U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein22 protein.
Length = 182
Score = 41.1 bits (92), Expect = 8e-04
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +3
Query: 291 IFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRF 389
I GP DTP+E G F++ + F + YPN P ++F
Sbjct: 35 IAGPADTPYETGVFEVDLTFPDNYPNALPQIKF 67
>U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein6 protein.
Length = 314
Score = 39.5 bits (88), Expect = 0.003
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 3/88 (3%)
Frame = +3
Query: 255 PTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGGI 434
P ++N+ W+ I G T FE G + I F +YP KPP + ++ + + +
Sbjct: 33 PMEDNLFEWHFTIRGTLGTDFEGGIYHGRIIFPADYPMKPPNLILLTP--NGRFELNKKV 90
Query: 435 CLDIL---QNRWSPTYDVSAILTSIQSF 509
CL I W P++ + L ++ F
Sbjct: 91 CLSISGYHPETWLPSWSIRTALLALIGF 118
>AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical
protein F52C6.12 protein.
Length = 78
Score = 33.1 bits (72), Expect = 0.22
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +3
Query: 219 LTRGSTYRCVRSPTDNNIMIWNAVIFGPHDTPFEDGTFKLTI 344
L R +C +++ W A I GP ++P++ G F LTI
Sbjct: 13 LGRDPPAQCSTGSVGDDLYHWQATIMGPPESPYQGGIFFLTI 54
>Z98877-7|CAB63403.1| 292|Caenorhabditis elegans Hypothetical
protein Y69H2.6 protein.
Length = 292
Score = 31.9 bits (69), Expect = 0.51
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +3
Query: 252 SPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFV---SKMFHP 410
SP+ NN +W VIF F G F+ I E+P+ R + S +FHP
Sbjct: 42 SPSANNKFLWFGVIF-VRKGIFGGGIFRFNIHIPLEFPDASDLPRVIFEQSNLFHP 96
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +2
Query: 515 DPNPNSPANSMAAQLYKENRREYEKRVKACVEQS 616
D + + N A+ LYKE+R ++ + K CVE S
Sbjct: 137 DVDTDKCINPEASVLYKEHRDKFREIAKECVEAS 170
>AL132952-10|CAB63384.1| 591|Caenorhabditis elegans Hypothetical
protein Y51H4A.13 protein.
Length = 591
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +2
Query: 536 ANSMAAQLYKENRREYEKRVKACVEQ 613
A + AQL +E+RRE EKRVK EQ
Sbjct: 408 ARELDAQLIEESRRETEKRVKEEAEQ 433
>AC006680-5|AAK72301.2| 300|Caenorhabditis elegans Serpentine
receptor, class x protein60 protein.
Length = 300
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -3
Query: 196 VFLLELTF*FSIPKFYHNEIFLLLSWS 116
VFLLEL F IP+++HN+ + L S
Sbjct: 222 VFLLELVTYFFIPQYFHNQWIIFLGTS 248
>Z34802-3|CAA84333.1| 354|Caenorhabditis elegans Hypothetical
protein M88.3 protein.
Length = 354
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -2
Query: 611 VLHMLSLSFRILVDSPCKAVRPSNLLESLG 522
V+H + + D PCK PSNLL ++G
Sbjct: 103 VVHDVPPPVTAICDGPCKKAFPSNLLNTIG 132
>Z78546-6|CAB54307.1| 642|Caenorhabditis elegans Hypothetical
protein M03B6.3 protein.
Length = 642
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 282 NAVIFG-PHDTPFEDGTFKLTIEFTEEYPNKPPTVR 386
N FG P D P +GT K +F + + ++PPT +
Sbjct: 90 NKTDFGTPLDLPGMNGTSKAAFKFLDAFTSQPPTTK 125
>Z78545-5|CAB01764.2| 642|Caenorhabditis elegans Hypothetical
protein M03B6.3 protein.
Length = 642
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 282 NAVIFG-PHDTPFEDGTFKLTIEFTEEYPNKPPTVR 386
N FG P D P +GT K +F + + ++PPT +
Sbjct: 90 NKTDFGTPLDLPGMNGTSKAAFKFLDAFTSQPPTTK 125
>AF016445-2|AAC69064.1| 376|Caenorhabditis elegans Serpentine
receptor, class w protein134 protein.
Length = 376
Score = 28.3 bits (60), Expect = 6.3
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -3
Query: 601 CFHSLFVFSSILLVKLCGHRI 539
C H LF+FS IL + C H I
Sbjct: 308 CNHCLFLFSMILTINTCSHFI 328
>Z78542-2|CAB01744.2| 641|Caenorhabditis elegans Hypothetical
protein F20D1.2 protein.
Length = 641
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -1
Query: 330 MFHLQMEYHEGQISQHSRS*YC 265
+F L ++YH+ QIS H S +C
Sbjct: 154 LFRLLLQYHDPQISNHLESLHC 175
>Z54236-10|CAA90986.1| 407|Caenorhabditis elegans Hypothetical
protein C09G9.6 protein.
Length = 407
Score = 27.9 bits (59), Expect = 8.3
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Frame = -3
Query: 427 PSA*TFG*NIFDTNRTVGGLFGYSSVNSIVSLNVPSS--NGVS*GPNITAFQIIILLSVG 254
P+A +FG + T GG+ GYSS S S ++ SS N S F +
Sbjct: 313 PNAGSFG--MLGKQNTPGGVSGYSSAGSTPSQDLSSSSLNAASAAAAAAYFANSAVAQSL 370
Query: 253 LLTHL*VDPLVSV*NPSS 200
L+ + DP++S P S
Sbjct: 371 LMKSVATDPMMSCNGPFS 388
>Z54235-12|CAA90977.1| 407|Caenorhabditis elegans Hypothetical
protein C09G9.6 protein.
Length = 407
Score = 27.9 bits (59), Expect = 8.3
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Frame = -3
Query: 427 PSA*TFG*NIFDTNRTVGGLFGYSSVNSIVSLNVPSS--NGVS*GPNITAFQIIILLSVG 254
P+A +FG + T GG+ GYSS S S ++ SS N S F +
Sbjct: 313 PNAGSFG--MLGKQNTPGGVSGYSSAGSTPSQDLSSSSLNAASAAAAAAYFANSAVAQSL 370
Query: 253 LLTHL*VDPLVSV*NPSS 200
L+ + DP++S P S
Sbjct: 371 LMKSVATDPMMSCNGPFS 388
>AF125445-1|AAD12803.2| 550|Caenorhabditis elegans Hypothetical
protein Y24D9B.1 protein.
Length = 550
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +2
Query: 536 ANSMAAQLYKENRREYEKRVKACVEQ 613
A + AQL +E RRE EKRVK +Q
Sbjct: 408 ARELDAQLIEEARRETEKRVKEEADQ 433
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,601,871
Number of Sequences: 27780
Number of extensions: 418071
Number of successful extensions: 1113
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1058
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1106
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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