Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30879
(759 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E... 161 5e-40
At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E... 161 5e-40
At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E... 161 5e-40
At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E... 158 4e-39
At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative ... 102 3e-22
At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative ... 102 3e-22
At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative ... 99 3e-21
At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative ... 99 3e-21
At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa ... 99 4e-21
At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa ... 99 4e-21
At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative ... 98 6e-21
At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)... 97 8e-21
At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)... 97 1e-20
At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)... 97 1e-20
At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E... 97 1e-20
At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E... 97 1e-20
At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative ... 95 5e-20
At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative ... 95 6e-20
At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E... 94 8e-20
At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative ... 94 1e-19
At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)... 94 1e-19
At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)... 93 1e-19
At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E... 92 3e-19
At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative ... 90 1e-18
At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family pro... 89 2e-18
At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative ... 87 1e-17
At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E... 85 5e-17
At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)... 83 2e-16
At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative ... 82 4e-16
At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)... 81 1e-15
At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative ... 79 2e-15
At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative ... 79 2e-15
At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10) id... 79 3e-15
At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative ... 73 2e-13
At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E... 73 2e-13
At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)... 72 5e-13
At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative ... 70 2e-12
At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E... 70 2e-12
At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)... 69 3e-12
At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)... 69 4e-12
At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E... 69 4e-12
At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)... 66 2e-11
At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative ... 57 1e-08
At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative ... 57 1e-08
At2g18600.1 68415.m02166 RUB1-conjugating enzyme, putative stron... 57 1e-08
At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family pro... 53 2e-07
At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related si... 52 4e-07
At2g36060.1 68415.m04427 ubiquitin-conjugating enzyme family pro... 52 5e-07
At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family pro... 50 1e-06
At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family pro... 50 1e-06
At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative ... 50 2e-06
At2g36060.2 68415.m04428 ubiquitin-conjugating enzyme family pro... 48 7e-06
At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family pro... 48 7e-06
At3g52560.1 68416.m05784 ubiquitin-conjugating enzyme family pro... 48 9e-06
At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family pro... 45 5e-05
At3g52560.2 68416.m05785 ubiquitin-conjugating enzyme family pro... 44 1e-04
At3g60650.1 68416.m06786 expressed protein 32 0.36
At5g50990.1 68418.m06322 pentatricopeptide (PPR) repeat-containi... 29 3.4
At1g77850.1 68414.m09072 transcriptional factor B3 family protei... 29 3.4
At5g26120.1 68418.m03107 glycosyl hydrolase family protein 51 si... 29 4.4
At4g29490.1 68417.m04208 Xaa-Pro dipeptidase, putative / prolida... 28 5.9
At1g18700.1 68414.m02333 DNAJ heat shock N-terminal domain-conta... 28 7.7
>At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E2;
identical to gi:2689242, SP:P42745
Length = 152
Score = 161 bits (391), Expect = 5e-40
Identities = 67/85 (78%), Positives = 80/85 (94%)
Frame = +3
Query: 252 SPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGG 431
+P DNNIM+WNAVIFGP DTP++ GTFKL+++F+E+YPNKPPTVRFVS+MFHPN+YADG
Sbjct: 27 APQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGS 86
Query: 432 ICLDILQNRWSPTYDVSAILTSIQS 506
ICLDILQN+WSP YDV+AILTSIQS
Sbjct: 87 ICLDILQNQWSPIYDVAAILTSIQS 111
Score = 56.0 bits (129), Expect = 3e-08
Identities = 23/38 (60%), Positives = 32/38 (84%)
Frame = +2
Query: 506 ILSDPNPNSPANSMAAQLYKENRREYEKRVKACVEQSF 619
+L DPNPNSPANS AA+++ E++REY +RV+ VEQS+
Sbjct: 112 LLCDPNPNSPANSEAARMFSESKREYNRRVREVVEQSW 149
Score = 55.2 bits (127), Expect = 4e-08
Identities = 23/27 (85%), Positives = 26/27 (96%)
Frame = +1
Query: 175 MSTPARRRLMRDFKRLQEDPPTGVSGA 255
MSTPAR+RLMRDFKRLQ+DPP G+SGA
Sbjct: 1 MSTPARKRLMRDFKRLQQDPPAGISGA 27
>At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 161 bits (391), Expect = 5e-40
Identities = 67/85 (78%), Positives = 80/85 (94%)
Frame = +3
Query: 252 SPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGG 431
+P DNNIM+WNAVIFGP DTP++ GTFKL+++F+E+YPNKPPTVRFVS+MFHPN+YADG
Sbjct: 27 APQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGS 86
Query: 432 ICLDILQNRWSPTYDVSAILTSIQS 506
ICLDILQN+WSP YDV+AILTSIQS
Sbjct: 87 ICLDILQNQWSPIYDVAAILTSIQS 111
Score = 57.2 bits (132), Expect = 1e-08
Identities = 24/38 (63%), Positives = 32/38 (84%)
Frame = +2
Query: 506 ILSDPNPNSPANSMAAQLYKENRREYEKRVKACVEQSF 619
+L DPNPNSPANS AA++Y E++REY +RV+ VEQS+
Sbjct: 112 LLCDPNPNSPANSEAARMYSESKREYNRRVRDVVEQSW 149
Score = 55.2 bits (127), Expect = 4e-08
Identities = 23/27 (85%), Positives = 26/27 (96%)
Frame = +1
Query: 175 MSTPARRRLMRDFKRLQEDPPTGVSGA 255
MSTPAR+RLMRDFKRLQ+DPP G+SGA
Sbjct: 1 MSTPARKRLMRDFKRLQQDPPAGISGA 27
>At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 161 bits (391), Expect = 5e-40
Identities = 67/85 (78%), Positives = 80/85 (94%)
Frame = +3
Query: 252 SPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGG 431
+P DNNIM+WNAVIFGP DTP++ GTFKL+++F+E+YPNKPPTVRFVS+MFHPN+YADG
Sbjct: 27 APQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGS 86
Query: 432 ICLDILQNRWSPTYDVSAILTSIQS 506
ICLDILQN+WSP YDV+AILTSIQS
Sbjct: 87 ICLDILQNQWSPIYDVAAILTSIQS 111
Score = 57.2 bits (132), Expect = 1e-08
Identities = 24/38 (63%), Positives = 32/38 (84%)
Frame = +2
Query: 506 ILSDPNPNSPANSMAAQLYKENRREYEKRVKACVEQSF 619
+L DPNPNSPANS AA++Y E++REY +RV+ VEQS+
Sbjct: 112 LLCDPNPNSPANSEAARMYSESKREYNRRVRDVVEQSW 149
Score = 55.2 bits (127), Expect = 4e-08
Identities = 23/27 (85%), Positives = 26/27 (96%)
Frame = +1
Query: 175 MSTPARRRLMRDFKRLQEDPPTGVSGA 255
MSTPAR+RLMRDFKRLQ+DPP G+SGA
Sbjct: 1 MSTPARKRLMRDFKRLQQDPPAGISGA 27
>At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E2;
identical to gi:431261, SP:P42746
Length = 150
Score = 158 bits (383), Expect = 4e-39
Identities = 66/85 (77%), Positives = 77/85 (90%)
Frame = +3
Query: 252 SPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGG 431
+P DNNIM WNA+IFGP DTP++ GTFKLT+ FTE+YPNKPP VRFVS+MFHPN+YADG
Sbjct: 27 APQDNNIMHWNALIFGPEDTPWDGGTFKLTLHFTEDYPNKPPIVRFVSRMFHPNIYADGS 86
Query: 432 ICLDILQNRWSPTYDVSAILTSIQS 506
ICLDILQN+WSP YDV+A+LTSIQS
Sbjct: 87 ICLDILQNQWSPIYDVAAVLTSIQS 111
Score = 54.4 bits (125), Expect = 8e-08
Identities = 22/39 (56%), Positives = 32/39 (82%)
Frame = +2
Query: 506 ILSDPNPNSPANSMAAQLYKENRREYEKRVKACVEQSFI 622
+L DPNP+SPAN+ AA+L+ EN+REY ++V VEQS++
Sbjct: 112 LLCDPNPDSPANAEAARLFSENKREYNRKVIEIVEQSYV 150
Score = 49.2 bits (112), Expect = 3e-06
Identities = 20/27 (74%), Positives = 25/27 (92%)
Frame = +1
Query: 175 MSTPARRRLMRDFKRLQEDPPTGVSGA 255
M+TPA++RLM DFKRLQ+DPP G+SGA
Sbjct: 1 MTTPAKKRLMWDFKRLQKDPPVGISGA 27
>At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 102 bits (244), Expect = 3e-22
Identities = 45/96 (46%), Positives = 60/96 (62%)
Frame = +3
Query: 219 LTRGSTYRCVRSPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSK 398
L R C PT +++ W A I GP D+PF G F +TI F +YP KPP V F +K
Sbjct: 13 LQRDPPVSCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPDYPFKPPKVAFRTK 72
Query: 399 MFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQS 506
++HPN+ ++G ICLDIL+ +WSP VS +L SI S
Sbjct: 73 VYHPNINSNGSICLDILKEQWSPALTVSKVLLSICS 108
Score = 31.5 bits (68), Expect = 0.63
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +2
Query: 506 ILSDPNPNSPANSMAAQLYKENRREYEKRVKACVEQ 613
+L+DPNP+ P A +YK +R +YE ++ ++
Sbjct: 109 LLTDPNPDDPLVPEIAHIYKTDRVKYESTAQSWTQK 144
>At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 102 bits (244), Expect = 3e-22
Identities = 45/96 (46%), Positives = 60/96 (62%)
Frame = +3
Query: 219 LTRGSTYRCVRSPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSK 398
L R C PT +++ W A I GP D+PF G F +TI F +YP KPP V F +K
Sbjct: 13 LQRDPPVSCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPDYPFKPPKVAFRTK 72
Query: 399 MFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQS 506
++HPN+ ++G ICLDIL+ +WSP VS +L SI S
Sbjct: 73 VYHPNINSNGSICLDILKEQWSPALTVSKVLLSICS 108
Score = 31.5 bits (68), Expect = 0.63
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +2
Query: 506 ILSDPNPNSPANSMAAQLYKENRREYEKRVKACVEQ 613
+L+DPNP+ P A +YK +R +YE ++ ++
Sbjct: 109 LLTDPNPDDPLVPEIAHIYKTDRVKYESTAQSWTQK 144
>At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P35133 Ubiquitin-conjugating
enzyme E2-17 kDa 10 (EC 6.3.2.19) (Ubiquitin- protein
ligase 10) (Ubiquitin carrier protein 10) {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 99.1 bits (236), Expect = 3e-21
Identities = 42/96 (43%), Positives = 60/96 (62%)
Frame = +3
Query: 219 LTRGSTYRCVRSPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSK 398
L R C PT ++ W A I GP+++P+ G F + I F +YP KPP V F +K
Sbjct: 13 LQRDPPVSCSAGPTGEDMFHWQATIMGPNESPYSGGVFLVNIHFPPDYPFKPPKVVFRTK 72
Query: 399 MFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQS 506
+FHPN+ ++G ICLDIL+++WSP +S +L SI S
Sbjct: 73 VFHPNINSNGNICLDILKDQWSPALTISKVLLSICS 108
Score = 31.1 bits (67), Expect = 0.83
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = +2
Query: 506 ILSDPNPNSPANSMAAQLYKENRREYEKRVKACVEQ 613
+L+DPNP+ P A +YK ++ +YE ++ ++
Sbjct: 109 LLTDPNPDDPLVPEIAHIYKTDKTKYEAMARSWTQK 144
>At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative
identical or nearly so to Ubiquitin-conjugating enzymes
SP|P35132, SP|P35131, SP|P35133 from {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 99.1 bits (236), Expect = 3e-21
Identities = 42/88 (47%), Positives = 56/88 (63%)
Frame = +3
Query: 243 CVRSPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYA 422
C P ++ W A I GP D+P+ G F +TI F +YP KPP V F +K+FHPNV +
Sbjct: 21 CSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNVNS 80
Query: 423 DGGICLDILQNRWSPTYDVSAILTSIQS 506
+G ICLDIL+ +WSP +S +L SI S
Sbjct: 81 NGSICLDILKEQWSPALTISKVLLSICS 108
Score = 32.7 bits (71), Expect = 0.27
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +2
Query: 506 ILSDPNPNSPANSMAAQLYKENRREYEKRVKACVEQ 613
+L+DPNP+ P A +YK +R +YE ++ ++
Sbjct: 109 LLTDPNPDDPLVPEIAHMYKTDRAKYESTARSWTQK 144
Score = 27.9 bits (59), Expect = 7.7
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +1
Query: 187 ARRRLMRDFKRLQEDPPTGVS 249
A +R++++ K LQ+DPPT S
Sbjct: 2 ASKRILKELKDLQKDPPTSCS 22
>At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 178
Score = 98.7 bits (235), Expect = 4e-21
Identities = 41/88 (46%), Positives = 56/88 (63%)
Frame = +3
Query: 243 CVRSPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYA 422
C P ++ W A I GP D+P+ G F +TI F +YP KPP V F +K+FHPN+ +
Sbjct: 51 CSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS 110
Query: 423 DGGICLDILQNRWSPTYDVSAILTSIQS 506
+G ICLDIL+ +WSP +S +L SI S
Sbjct: 111 NGSICLDILKEQWSPALTISKVLLSICS 138
Score = 31.5 bits (68), Expect = 0.63
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +2
Query: 506 ILSDPNPNSPANSMAAQLYKENRREYEKRVKACVEQ 613
+L+DPNP+ P A +YK ++ +YE + ++
Sbjct: 139 LLTDPNPDDPLVPEIAHMYKTDKNKYESTARTWTQK 174
Score = 27.9 bits (59), Expect = 7.7
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +1
Query: 187 ARRRLMRDFKRLQEDPPTGVS 249
A +R++++ K LQ+DPPT S
Sbjct: 32 ASKRILKELKDLQKDPPTSCS 52
>At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 148
Score = 98.7 bits (235), Expect = 4e-21
Identities = 41/88 (46%), Positives = 56/88 (63%)
Frame = +3
Query: 243 CVRSPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYA 422
C P ++ W A I GP D+P+ G F +TI F +YP KPP V F +K+FHPN+ +
Sbjct: 21 CSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS 80
Query: 423 DGGICLDILQNRWSPTYDVSAILTSIQS 506
+G ICLDIL+ +WSP +S +L SI S
Sbjct: 81 NGSICLDILKEQWSPALTISKVLLSICS 108
Score = 31.5 bits (68), Expect = 0.63
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +2
Query: 506 ILSDPNPNSPANSMAAQLYKENRREYEKRVKACVEQ 613
+L+DPNP+ P A +YK ++ +YE + ++
Sbjct: 109 LLTDPNPDDPLVPEIAHMYKTDKNKYESTARTWTQK 144
Score = 27.9 bits (59), Expect = 7.7
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +1
Query: 187 ARRRLMRDFKRLQEDPPTGVS 249
A +R++++ K LQ+DPPT S
Sbjct: 2 ASKRILKELKDLQKDPPTSCS 22
>At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative
strong similar to ubiquitin-conjugating enzymes E2-17
from [Arabidopsis thaliana] SP|P35134, SP|P35132,
SP|P35133; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 149
Score = 97.9 bits (233), Expect = 6e-21
Identities = 41/89 (46%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Frame = +3
Query: 243 CVRSPT-DNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVY 419
C P + +I W A I GPHD+P+ G F ++I+F+ +YP KPP V F +K++HPN+
Sbjct: 21 CSAGPVAEEDIFHWQATIMGPHDSPYSGGVFTVSIDFSSDYPFKPPKVNFKTKVYHPNID 80
Query: 420 ADGGICLDILQNRWSPTYDVSAILTSIQS 506
+ G ICLDIL+ +WSP S +L SI S
Sbjct: 81 SKGSICLDILKEQWSPAPTTSKVLLSICS 109
Score = 32.7 bits (71), Expect = 0.27
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2
Query: 506 ILSDPNPNSPANSMAAQLYKENRREYE 586
+L+DPNPN P A LYK ++ +YE
Sbjct: 110 LLTDPNPNDPLVPEIAHLYKVDKSKYE 136
>At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)
nearly identical to ubiquitin-conjugating enzyme UBC20
[Arabidopsis thaliana] GI:22530867; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 180
Score = 97.5 bits (232), Expect = 8e-21
Identities = 43/84 (51%), Positives = 55/84 (65%)
Frame = +3
Query: 255 PTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGGI 434
P ++NI W I G DT FE ++L++ F+ +YP KPP V+F + FHPNV G I
Sbjct: 59 PEEDNIFCWKGTITGSKDTVFEGTEYRLSLSFSNDYPFKPPKVKFETCCFHPNVDVYGNI 118
Query: 435 CLDILQNRWSPTYDVSAILTSIQS 506
CLDILQ++WS YDV IL SIQS
Sbjct: 119 CLDILQDKWSSAYDVRTILLSIQS 142
Score = 33.1 bits (72), Expect = 0.21
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +2
Query: 506 ILSDPNPNSPANSMAAQLYKENRREYEKRVK 598
+L +PN +SP N+ AAQL+ N+ EY K V+
Sbjct: 143 LLGEPNISSPLNTQAAQLW-SNQEEYRKMVE 172
>At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 96.7 bits (230), Expect = 1e-20
Identities = 40/88 (45%), Positives = 56/88 (63%)
Frame = +3
Query: 243 CVRSPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYA 422
C P ++ W A I GP ++P+ G F +TI F +YP KPP V F +K+FHPN+ +
Sbjct: 21 CSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS 80
Query: 423 DGGICLDILQNRWSPTYDVSAILTSIQS 506
+G ICLDIL+ +WSP +S +L SI S
Sbjct: 81 NGSICLDILKEQWSPALTISKVLLSICS 108
Score = 31.9 bits (69), Expect = 0.48
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = +2
Query: 506 ILSDPNPNSPANSMAAQLYKENRREYEKRVKACVEQ 613
+L+DPNP+ P A +YK ++ +YE ++ ++
Sbjct: 109 LLTDPNPDDPLVPEIAHMYKTDKNKYESTARSWTQK 144
Score = 27.9 bits (59), Expect = 7.7
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +1
Query: 187 ARRRLMRDFKRLQEDPPTGVS 249
A +R++++ K LQ+DPPT S
Sbjct: 2 ASKRILKELKDLQKDPPTSCS 22
>At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 96.7 bits (230), Expect = 1e-20
Identities = 40/88 (45%), Positives = 56/88 (63%)
Frame = +3
Query: 243 CVRSPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYA 422
C P ++ W A I GP ++P+ G F +TI F +YP KPP V F +K+FHPN+ +
Sbjct: 21 CSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS 80
Query: 423 DGGICLDILQNRWSPTYDVSAILTSIQS 506
+G ICLDIL+ +WSP +S +L SI S
Sbjct: 81 NGSICLDILKEQWSPALTISKVLLSICS 108
Score = 31.9 bits (69), Expect = 0.48
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = +2
Query: 506 ILSDPNPNSPANSMAAQLYKENRREYEKRVKACVEQ 613
+L+DPNP+ P A +YK ++ +YE ++ ++
Sbjct: 109 LLTDPNPDDPLVPEIAHMYKTDKNKYESTARSWTQK 144
Score = 27.9 bits (59), Expect = 7.7
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +1
Query: 187 ARRRLMRDFKRLQEDPPTGVS 249
A +R++++ K LQ+DPPT S
Sbjct: 2 ASKRILKELKDLQKDPPTSCS 22
>At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 96.7 bits (230), Expect = 1e-20
Identities = 40/88 (45%), Positives = 56/88 (63%)
Frame = +3
Query: 243 CVRSPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYA 422
C P ++ W A I GP ++P+ G F +TI F +YP KPP V F +K+FHPN+ +
Sbjct: 21 CSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS 80
Query: 423 DGGICLDILQNRWSPTYDVSAILTSIQS 506
+G ICLDIL+ +WSP +S +L SI S
Sbjct: 81 NGSICLDILKEQWSPALTISKVLLSICS 108
Score = 31.5 bits (68), Expect = 0.63
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +2
Query: 506 ILSDPNPNSPANSMAAQLYKENRREYE 586
+L+DPNP+ P A +YK +R +YE
Sbjct: 109 LLTDPNPDDPLVPEIAHMYKTDRAKYE 135
Score = 27.9 bits (59), Expect = 7.7
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +1
Query: 187 ARRRLMRDFKRLQEDPPTGVS 249
A +R++++ K LQ+DPPT S
Sbjct: 2 ASKRILKELKDLQKDPPTSCS 22
>At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 96.7 bits (230), Expect = 1e-20
Identities = 40/88 (45%), Positives = 56/88 (63%)
Frame = +3
Query: 243 CVRSPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYA 422
C P ++ W A I GP ++P+ G F +TI F +YP KPP V F +K+FHPN+ +
Sbjct: 21 CSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS 80
Query: 423 DGGICLDILQNRWSPTYDVSAILTSIQS 506
+G ICLDIL+ +WSP +S +L SI S
Sbjct: 81 NGSICLDILKEQWSPALTISKVLLSICS 108
Score = 31.5 bits (68), Expect = 0.63
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +2
Query: 506 ILSDPNPNSPANSMAAQLYKENRREYE 586
+L+DPNP+ P A +YK +R +YE
Sbjct: 109 LLTDPNPDDPLVPEIAHMYKTDRAKYE 135
Score = 27.9 bits (59), Expect = 7.7
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +1
Query: 187 ARRRLMRDFKRLQEDPPTGVS 249
A +R++++ K LQ+DPPT S
Sbjct: 2 ASKRILKELKDLQKDPPTSCS 22
>At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 95.1 bits (226), Expect = 5e-20
Identities = 39/85 (45%), Positives = 59/85 (69%)
Frame = +3
Query: 252 SPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGG 431
SP+++N+ +N +I GP +P+E G FKL + EEYP P VRF++K++HPN+ G
Sbjct: 28 SPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGR 87
Query: 432 ICLDILQNRWSPTYDVSAILTSIQS 506
ICLDIL+++WSP + +L SIQ+
Sbjct: 88 ICLDILKDKWSPALQIRTVLLSIQA 112
>At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 94.7 bits (225), Expect = 6e-20
Identities = 39/85 (45%), Positives = 58/85 (68%)
Frame = +3
Query: 252 SPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGG 431
SP++ N+ +N +I GP +P+E G FKL + EEYP P VRF++K++HPN+ G
Sbjct: 28 SPSEENMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGR 87
Query: 432 ICLDILQNRWSPTYDVSAILTSIQS 506
ICLDIL+++WSP + +L SIQ+
Sbjct: 88 ICLDILKDKWSPALQIRTVLLSIQA 112
>At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 149
Score = 94.3 bits (224), Expect = 8e-20
Identities = 39/84 (46%), Positives = 55/84 (65%)
Frame = +3
Query: 255 PTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGGI 434
P ++ W A I GP ++P+ G F +TI F +YP KPP V F +K+FHPN+ ++G I
Sbjct: 26 PVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSI 85
Query: 435 CLDILQNRWSPTYDVSAILTSIQS 506
CLDIL+ +WSP +S +L SI S
Sbjct: 86 CLDILKEQWSPALTISKVLLSICS 109
Score = 31.5 bits (68), Expect = 0.63
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +2
Query: 506 ILSDPNPNSPANSMAAQLYKENRREYE 586
+L+DPNP+ P A +YK +R +YE
Sbjct: 110 LLTDPNPDDPLVPEIAHMYKTDRAKYE 136
>At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative
similar to SP|O60015 Ubiquitin-conjugating enzyme E2-21
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) {Pichia angusta}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 157
Score = 93.9 bits (223), Expect = 1e-19
Identities = 40/81 (49%), Positives = 55/81 (67%), Gaps = 1/81 (1%)
Frame = +3
Query: 261 DNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNV-YADGGIC 437
D NI W A+I GP +TP+E G F+L E YP +PP VRF++K+FHPNV + G IC
Sbjct: 31 DTNIFKWTALIKGPSETPYEGGVFQLAFSVPEPYPLQPPQVRFLTKIFHPNVHFKTGEIC 90
Query: 438 LDILQNRWSPTYDVSAILTSI 500
LDIL+N WSP + + ++ +I
Sbjct: 91 LDILKNAWSPAWTLQSVCRAI 111
>At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)
E2; identical to gi:12643427, SP:P35134
Length = 148
Score = 93.9 bits (223), Expect = 1e-19
Identities = 38/88 (43%), Positives = 56/88 (63%)
Frame = +3
Query: 243 CVRSPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYA 422
C P ++ W A I GP ++P+ G F ++I F +YP KPP V F +K++HPN+ +
Sbjct: 21 CSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDYPFKPPKVSFKTKVYHPNINS 80
Query: 423 DGGICLDILQNRWSPTYDVSAILTSIQS 506
+G ICLDIL+ +WSP +S +L SI S
Sbjct: 81 NGSICLDILKEQWSPALTISKVLLSICS 108
Score = 32.7 bits (71), Expect = 0.27
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +2
Query: 506 ILSDPNPNSPANSMAAQLYKENRREYEKRVKACVEQ 613
+L+DPNP+ P A +YK +R +YE ++ ++
Sbjct: 109 LLTDPNPDDPLVPEIAHMYKTDRSKYESTARSWTQK 144
>At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)
nearly identical to ubiquitin-conjugating enzyme UBC19
[Arabidopsis thaliana] GI:22530865; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 181
Score = 93.5 bits (222), Expect = 1e-19
Identities = 42/84 (50%), Positives = 54/84 (64%)
Frame = +3
Query: 255 PTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGGI 434
P ++NI W I G DT FE ++L++ F+ +YP K P V+F + FHPNV G I
Sbjct: 60 PEEDNIFCWKGTITGSKDTVFEGTEYRLSLTFSNDYPFKSPKVKFETCCFHPNVDLYGNI 119
Query: 435 CLDILQNRWSPTYDVSAILTSIQS 506
CLDILQ++WS YDV IL SIQS
Sbjct: 120 CLDILQDKWSSAYDVRTILLSIQS 143
Score = 33.1 bits (72), Expect = 0.21
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +2
Query: 506 ILSDPNPNSPANSMAAQLYKENRREYEKRVK 598
+L +PN +SP N+ AAQL+ N+ EY K V+
Sbjct: 144 LLGEPNISSPLNNQAAQLW-SNQEEYRKMVE 173
>At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 145
Score = 92.3 bits (219), Expect = 3e-19
Identities = 37/87 (42%), Positives = 53/87 (60%)
Frame = +3
Query: 243 CVRSPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYA 422
C P ++ W A I GP ++P+ G F +TI F +YP KPP V F +K+FHPN+ +
Sbjct: 21 CSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS 80
Query: 423 DGGICLDILQNRWSPTYDVSAILTSIQ 503
+G ICLDIL+ +WSP +S + Q
Sbjct: 81 NGSICLDILKEQWSPALTISKVTLIFQ 107
Score = 27.9 bits (59), Expect = 7.7
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +1
Query: 187 ARRRLMRDFKRLQEDPPTGVS 249
A +R++++ K LQ+DPPT S
Sbjct: 2 ASKRILKELKDLQKDPPTSCS 22
>At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 112
Score = 90.2 bits (214), Expect = 1e-18
Identities = 37/85 (43%), Positives = 56/85 (65%)
Frame = +3
Query: 252 SPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGG 431
SP+++N+ +N +I GP +P+E G FKL + EEYP P VRF++K++HPN+ G
Sbjct: 28 SPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGR 87
Query: 432 ICLDILQNRWSPTYDVSAILTSIQS 506
ICLDIL+++WSP + +L S
Sbjct: 88 ICLDILKDKWSPALQIRTVLLRYMS 112
>At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family
protein similar to Ubiquitin-conjugating enzyme E2-16
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) from {Schizosaccharomyces pombe}
SP|P46595, {Caenorhabditis elegans} SP|P35129; contains
Pfam profile PF00179: Ubiquitin-conjugating enzyme
Length = 154
Score = 89.4 bits (212), Expect = 2e-18
Identities = 37/79 (46%), Positives = 53/79 (67%)
Frame = +3
Query: 264 NNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGGICLD 443
NNI W AVI GP TP+E G F L+I+F +YP KPP F + ++HPN+ +G IC++
Sbjct: 34 NNIYEWTAVIRGPDGTPYEGGMFNLSIKFPTDYPFKPPKFTFKTPIYHPNINDEGSICMN 93
Query: 444 ILQNRWSPTYDVSAILTSI 500
IL+++W+P V +L SI
Sbjct: 94 ILKDKWTPALMVEKVLLSI 112
Score = 30.7 bits (66), Expect = 1.1
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +2
Query: 503 VILSDPNPNSPANSMAAQLYKENRREYEKRVK 598
++L PNP+ P QL+K NR ++++R +
Sbjct: 114 LLLEKPNPDDPLVPEIGQLFKNNRFQFDQRAR 145
>At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 120
Score = 87.0 bits (206), Expect = 1e-17
Identities = 36/76 (47%), Positives = 52/76 (68%)
Frame = +3
Query: 279 WNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGGICLDILQNR 458
+N +I GP +P+E G FKL + EEYP P VRF++K++HPN+ G ICLDIL+++
Sbjct: 4 FNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDK 63
Query: 459 WSPTYDVSAILTSIQS 506
WSP + +L SIQ+
Sbjct: 64 WSPALQIRTVLLSIQA 79
>At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E2;
identical to gi:992703, SP:P42747
Length = 198
Score = 85.0 bits (201), Expect = 5e-17
Identities = 41/93 (44%), Positives = 53/93 (56%), Gaps = 13/93 (13%)
Frame = +3
Query: 267 NIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGGICLDI 446
NI W+ I GP DT +E G F + F + YPN PPTVRF S M+HPNVY+DG +C+ I
Sbjct: 65 NIFEWSVTIIGPPDTLYEGGFFNAIMTFPQNYPNSPPTVRFTSDMWHPNVYSDGRVCISI 124
Query: 447 L-------------QNRWSPTYDVSAILTSIQS 506
L RW+P + V +I+ SI S
Sbjct: 125 LHPPGDDPSGYELASERWTPVHTVESIMLSIIS 157
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/37 (45%), Positives = 26/37 (70%)
Frame = +2
Query: 506 ILSDPNPNSPANSMAAQLYKENRREYEKRVKACVEQS 616
+LS PN SPAN AA+ +++ R E++K+V CV +S
Sbjct: 158 MLSGPNDESPANVEAAKEWRDKRDEFKKKVSRCVRKS 194
>At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)
E2; identical to gi:992706
Length = 166
Score = 83.0 bits (196), Expect = 2e-16
Identities = 40/95 (42%), Positives = 53/95 (55%), Gaps = 13/95 (13%)
Frame = +3
Query: 261 DNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGGICL 440
+ NI W+ I GP DT +E G F + F + YPN PPTVRF S ++HPNVY DG +C+
Sbjct: 31 EKNIFEWSVTIIGPPDTLYEGGFFYAIMSFPQNYPNSPPTVRFTSDIWHPNVYPDGRVCI 90
Query: 441 DIL-------------QNRWSPTYDVSAILTSIQS 506
IL RW+P + V +I+ SI S
Sbjct: 91 SILHPPGDDPSGYELASERWTPVHTVESIMLSIIS 125
Score = 41.1 bits (92), Expect = 8e-04
Identities = 18/37 (48%), Positives = 26/37 (70%)
Frame = +2
Query: 506 ILSDPNPNSPANSMAAQLYKENRREYEKRVKACVEQS 616
+LS PN SPAN AA+ ++E R E++K+V CV +S
Sbjct: 126 MLSGPNDESPANVEAAKEWREKRDEFKKKVSRCVRKS 162
>At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P50550 Ubiquitin-like protein
SUMO-1 conjugating enzyme (EC 6.3.2.19) (SUMO- 1-protein
ligase) (Ubiquitin carrier protein)
(Ubiquitin-conjugating enzyme UbcE2A) {Xenopus laevis};
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 160
Score = 81.8 bits (193), Expect = 4e-16
Identities = 37/81 (45%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Frame = +3
Query: 267 NIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGGICLDI 446
N+M+W+ I G T +E G F LT+ F+E+YP+KPP +F FHPNVY G +CL I
Sbjct: 38 NLMVWHCTIPGKAGTDWEGGFFPLTMHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSI 97
Query: 447 LQN--RWSPTYDVSAILTSIQ 503
L W P V IL IQ
Sbjct: 98 LNEDYGWRPAITVKQILVGIQ 118
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 506 ILSDPNPNSPANSMAAQLYKENRREYEKRVK 598
+L PNP PA + L+ ++ EY+KRVK
Sbjct: 120 LLDTPNPADPAQTDGYHLFCQDPVEYKKRVK 150
>At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)
E2; UbcAT3; identical to gi:2129757, S46656
Length = 167
Score = 80.6 bits (190), Expect = 1e-15
Identities = 39/95 (41%), Positives = 53/95 (55%), Gaps = 13/95 (13%)
Frame = +3
Query: 261 DNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGGICL 440
+ N+ W+ I GP DT +E G F + F E YP PPTV F S+M+HPNVY+DG +C+
Sbjct: 32 EKNVFQWSVSIMGPPDTLYEGGFFNAIMSFPENYPVSPPTVTFTSEMWHPNVYSDGKVCI 91
Query: 441 DIL-------------QNRWSPTYDVSAILTSIQS 506
IL RW+P + V +I+ SI S
Sbjct: 92 SILHPPGDDPHGYELASERWTPVHTVESIVLSIIS 126
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/37 (48%), Positives = 26/37 (70%)
Frame = +2
Query: 506 ILSDPNPNSPANSMAAQLYKENRREYEKRVKACVEQS 616
+LS PN SPAN AA+ +++NR E+ K+V CV +S
Sbjct: 127 MLSGPNDESPANVEAAKEWRDNRAEFRKKVSRCVRRS 163
>At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin conjugating enzyme
[Lycopersicon esculentum] GI:886679; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 192
Score = 79.4 bits (187), Expect = 2e-15
Identities = 35/85 (41%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Frame = +3
Query: 255 PTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYA-DGG 431
P +N+ I GP TP+E GTF++ I + YP +PP ++F +K++HPN+ + G
Sbjct: 27 PKSDNLTRLTGTIPGPIGTPYEGGTFQIDITMPDGYPFEPPKMQFSTKVWHPNISSQSGA 86
Query: 432 ICLDILQNRWSPTYDVSAILTSIQS 506
ICLDIL+++WSP + L SIQ+
Sbjct: 87 ICLDILKDQWSPALTLKTALVSIQA 111
>At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme from [Oryza
sativa] GI:1373001, {Arabidopsis thaliana} SP|P35134,
SP|P35131; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 177
Score = 79.4 bits (187), Expect = 2e-15
Identities = 35/93 (37%), Positives = 53/93 (56%)
Frame = +3
Query: 255 PTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGGI 434
P+ NI W A + GP P+E G F +++ +YP +PP + F +K+FHPN+ G I
Sbjct: 54 PSPENIFRWEATVNGPVGCPYEKGVFTVSVHIPPKYPYEPPKITFKTKIFHPNISEIGEI 113
Query: 435 CLDILQNRWSPTYDVSAILTSIQSF*VIPTQTL 533
+DIL +RWS ++ +L SI S P + L
Sbjct: 114 FVDILGSRWSSALTINLVLLSICSILSNPVEPL 146
>At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10)
identical to ubiquitin-conjugating enzyme COP10
[Arabidopsis thaliana] GI:20065779; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 182
Score = 79.0 bits (186), Expect = 3e-15
Identities = 35/93 (37%), Positives = 55/93 (59%)
Frame = +3
Query: 243 CVRSPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYA 422
C P +N+ W A I GP TP+E G F L I F +YP KPP + F ++++H NV
Sbjct: 56 CSAGPKGDNLYHWIATIIGPSGTPYEGGIFFLDIIFPSDYPFKPPKLVFKTRIYHCNVDT 115
Query: 423 DGGICLDILQNRWSPTYDVSAILTSIQSF*VIP 521
G + ++IL++ WSP ++ +L +I+S + P
Sbjct: 116 AGDLSVNILRDSWSPALTITKVLQAIRSIFLKP 148
>At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative
similar to Ubiquitin-conjugating enzyme E2
(Ubiquitin-protein ligase) (Ubiquitin carrier protein)
from {Xenopus laevis} SP|P51669, {Schizosaccharomyces
pombe} SP|P46595, {Caenorhabditis elegans} SP|P35129;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 409
Score = 73.3 bits (172), Expect = 2e-13
Identities = 33/78 (42%), Positives = 49/78 (62%), Gaps = 4/78 (5%)
Frame = +3
Query: 282 NAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGGICLDIL---- 449
+A I GP DT + +G F L I+ E YP +PP V F + ++HPN+ G ICLDIL
Sbjct: 48 DAQIEGPEDTVYANGIFNLKIQIPERYPFQPPIVSFATPIYHPNIDNSGRICLDILNLPP 107
Query: 450 QNRWSPTYDVSAILTSIQ 503
+ W P+ ++S +LTS++
Sbjct: 108 KGAWQPSLNISTVLTSMR 125
>At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E2;
identical to gi|431267, SP:P42750, PIR:S52661; contains
a ubiquitin-conjugating enzymes active site (PDOC00163)
Length = 183
Score = 72.9 bits (171), Expect = 2e-13
Identities = 28/80 (35%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Frame = +3
Query: 261 DNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNV-YADGGIC 437
++++ ++ GP D+ ++ G +K+ +E E YP K P+V FV+K++HPNV + G +C
Sbjct: 26 NDDLQMFYVTFHGPTDSLYQGGVWKIKVELPEAYPYKSPSVGFVNKIYHPNVDESSGAVC 85
Query: 438 LDILQNRWSPTYDVSAILTS 497
LD++ WSP +D+ + S
Sbjct: 86 LDVINQTWSPMFDLINVFES 105
>At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)
E2; identical to ubiquitin-conjugating enzyme 15
GI:2801442 from [Arabidopsis thaliana]
Length = 161
Score = 71.7 bits (168), Expect = 5e-13
Identities = 34/87 (39%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Frame = +3
Query: 249 RSPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKM-FHPNVYAD 425
R +N+ W + G T + + T++L +EF E YP + P V FVS HP++Y++
Sbjct: 36 RHKVTDNLQKWTIDVTGAPGTLYANETYQLQVEFPEHYPMEAPQVVFVSPAPSHPHIYSN 95
Query: 426 GGICLDILQNRWSPTYDVSAILTSIQS 506
G ICLDIL + WSP V+++ SI S
Sbjct: 96 GHICLDILYDSWSPAMTVNSVCISILS 122
>At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative
similar to SP|Q16763 Ubiquitin-conjugating enzyme E2-24
kDa (EC 6.3.2.19) (Ubiquitin- protein ligase) (Ubiquitin
carrier protein) {Homo sapiens}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 251
Score = 69.7 bits (163), Expect = 2e-12
Identities = 27/79 (34%), Positives = 52/79 (65%)
Frame = +3
Query: 285 AVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGGICLDILQNRWS 464
A I GP TP+E+G F++ + + ++P+ PP F++K+FHPNV ++G IC++ L+ W+
Sbjct: 44 ADIEGPVGTPYENGLFRMKLALSHDFPHSPPKGYFMTKIFHPNVASNGEICVNTLKKDWN 103
Query: 465 PTYDVSAILTSIQSF*VIP 521
P+ + +L+ ++ + P
Sbjct: 104 PSLGLRHVLSVVRCLLIEP 122
>At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E2;
identical to gi:431269, SP:P42749
Length = 185
Score = 69.7 bits (163), Expect = 2e-12
Identities = 26/62 (41%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Frame = +3
Query: 297 GPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNV-YADGGICLDILQNRWSPTY 473
GP D+ +E G +K+ +E + YP K P+V F++K++HPNV G +CLD++ WSP +
Sbjct: 38 GPKDSIYEGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDEMSGSVCLDVINQTWSPMF 97
Query: 474 DV 479
D+
Sbjct: 98 DL 99
Score = 34.3 bits (75), Expect = 0.089
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = +2
Query: 494 FYTVILSDPNPNSPANSMAAQLYKENRREYEKRVKACVEQ 613
F +L PNP+ P N AA L +R YE+RVK E+
Sbjct: 106 FLPQLLLYPNPSDPLNGEAAALMMRDRPTYEQRVKEYCEK 145
>At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)
E2; identical to gi:2801444, GB:AAC39325 from
[Arabidopsis thaliana] (Plant Mol. Biol. 23 (2), 387-396
(1993))
Length = 161
Score = 69.3 bits (162), Expect = 3e-12
Identities = 32/82 (39%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Frame = +3
Query: 264 NNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKM-FHPNVYADGGICL 440
+N+ W + G T + + T++L ++F E YP + P V F+ HP++Y++G ICL
Sbjct: 41 DNLQRWIIEVIGAPGTLYANDTYQLQVDFPEHYPMESPQVIFLHPAPLHPHIYSNGHICL 100
Query: 441 DILQNRWSPTYDVSAILTSIQS 506
DIL + WSP VS+I SI S
Sbjct: 101 DILYDSWSPAMTVSSICISILS 122
>At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)
E2; identical to gi:2801448
Length = 161
Score = 68.5 bits (160), Expect = 4e-12
Identities = 32/82 (39%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Frame = +3
Query: 264 NNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKM-FHPNVYADGGICL 440
+N+ W + G T + + T+ L +EF + YP + P V FV HP++Y++G ICL
Sbjct: 41 DNLQKWVIEVTGAPGTLYANETYNLQVEFPQHYPMEAPQVIFVPPAPLHPHIYSNGHICL 100
Query: 441 DILQNRWSPTYDVSAILTSIQS 506
DIL + WSP VS++ SI S
Sbjct: 101 DILYDSWSPAMTVSSVCISILS 122
>At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E2;
identical to gi:431265, SP:P42748
Length = 187
Score = 68.5 bits (160), Expect = 4e-12
Identities = 25/62 (40%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Frame = +3
Query: 297 GPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNV-YADGGICLDILQNRWSPTY 473
GP D+ ++ G +K+ +E + YP K P+V F++K++HPNV G +CLD++ WSP +
Sbjct: 38 GPKDSLYQGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDELSGSVCLDVINQTWSPMF 97
Query: 474 DV 479
D+
Sbjct: 98 DL 99
Score = 34.3 bits (75), Expect = 0.089
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = +2
Query: 494 FYTVILSDPNPNSPANSMAAQLYKENRREYEKRVKACVEQ 613
F +L PNP+ P N AA L +R YE+RVK E+
Sbjct: 106 FLPQLLLYPNPSDPLNGEAAALMMRDRPAYEQRVKEYCEK 145
>At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)
E2; identical to gi:2801446
Length = 161
Score = 66.1 bits (154), Expect = 2e-11
Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Frame = +3
Query: 264 NNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKM-FHPNVYADGGICL 440
+N+ W + G T + + T++L +EF E YP + P V F HP++Y++G ICL
Sbjct: 41 DNLQRWIIEVHGVPGTLYANETYQLQVEFPEHYPMEAPQVIFQHPAPLHPHIYSNGHICL 100
Query: 441 DILQNRWSPTYDVSAILTSIQS 506
D+L + WSP +S+I SI S
Sbjct: 101 DVLYDSWSPAMRLSSICLSILS 122
>At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 243
Score = 57.2 bits (132), Expect = 1e-08
Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Frame = +3
Query: 246 VRSPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYAD 425
V P+ N+I+ W+ V+ G TPF G + I+F EYP KPP + + +
Sbjct: 26 VARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPEYPYKPPGITMTTP--NGRFVTQ 83
Query: 426 GGICL---DILQNRWSPTYDVSAILTSIQSF 509
ICL D W+P + VS+ILT + SF
Sbjct: 84 KKICLSMSDFHPESWNPMWSVSSILTGLLSF 114
>At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 237
Score = 57.2 bits (132), Expect = 1e-08
Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Frame = +3
Query: 246 VRSPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYAD 425
V P+ N+I+ W+ V+ G TPF G + I+F EYP KPP + + +
Sbjct: 26 VARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPEYPYKPPGITMTTP--NGRFMTQ 83
Query: 426 GGICL---DILQNRWSPTYDVSAILTSIQSF 509
ICL D W+P + VS+ILT + SF
Sbjct: 84 KKICLSMSDFHPESWNPMWSVSSILTGLLSF 114
>At2g18600.1 68415.m02166 RUB1-conjugating enzyme, putative strong
similarity to gi:6635457 RUB1 conjugating enzyme
[Arabidopsis thaliana]; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 185
Score = 56.8 bits (131), Expect = 1e-08
Identities = 21/79 (26%), Positives = 44/79 (55%)
Frame = +3
Query: 255 PTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGGI 434
P N ++ V P + + G F + + + YP++ P V+ +K++HPN+ +G +
Sbjct: 54 PNGKNDLMNFEVTIKPDEGYYLSGNFVFSFQVSNMYPHEAPKVKCKTKVYHPNIDLEGNV 113
Query: 435 CLDILQNRWSPTYDVSAIL 491
CL+IL+ W P +++ ++
Sbjct: 114 CLNILREDWKPVLNINTVI 132
>At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family
protein similar to ubiquitin-conjugating enzyme
GB:3319990 from [Mus musculus]; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 1163
Score = 52.8 bits (121), Expect = 2e-07
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Frame = +3
Query: 261 DNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVS--KMFHPNVYADGGI 434
++ I + AVI G TP+ DG F I+F + YP+ PP V + S +PN+Y G +
Sbjct: 631 ESRIDLLRAVIIGAEGTPYHDGLFFFDIQFPDTYPSVPPKVHYHSGGLRINPNLYKCGKV 690
Query: 435 CLDILQNRWS 464
CL ++ + W+
Sbjct: 691 CLSLI-STWT 699
Score = 52.4 bits (120), Expect = 3e-07
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 10/92 (10%)
Frame = +3
Query: 261 DNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVS--KMFHPNVYADGGI 434
++ + + AVI G TP+ DG F I+F + YP+ PP V + S +PN+Y G +
Sbjct: 297 ESRMDLLRAVIIGAEGTPYHDGLFFFDIQFPDTYPSVPPNVHYHSGGLRINPNLYNCGKV 356
Query: 435 CLDIL-------QNRWSPTYD-VSAILTSIQS 506
CL +L + +W P + +L SIQ+
Sbjct: 357 CLSLLGTWAGSAREKWLPNESTMLQLLVSIQA 388
Score = 45.2 bits (102), Expect = 5e-05
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +3
Query: 261 DNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVS--KMFHPNVYADGGI 434
++ + + AVI G TP+ DG F I+F + YP+ PP V + S +PN+Y G +
Sbjct: 943 ESRMDLLRAVIIGAEGTPYHDGLFFFDIQFPDTYPSVPPNVYYHSGGLRINPNLYNCGKV 1002
Query: 435 CLDI 446
+ I
Sbjct: 1003 LVSI 1006
>At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related
similar to ubiquitin-conjugating enzyme (GI:3319990)
[Mus musculus]; similar to Baculoviral IAP
repeat-containing protein 6 (Ubiquitin-conjugating
BIR-domain enzyme apollon) (Swiss-Prot:Q9NR09) [Homo
sapiens];
Length = 609
Score = 52.0 bits (119), Expect = 4e-07
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 10/91 (10%)
Frame = +3
Query: 261 DNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVS--KMFHPNVYADGGI 434
++ + + AVI G TP+ DG F I F + YP+ PP V + S +PN+Y G +
Sbjct: 358 ESRMDLLRAVIIGAQGTPYHDGLFFFDIFFPDTYPSTPPIVHYHSGGLRINPNLYNCGKV 417
Query: 435 CLDIL-------QNRWSP-TYDVSAILTSIQ 503
CL +L + +W P T + +L SIQ
Sbjct: 418 CLSLLGTWSGNQREKWIPNTSTMLQVLVSIQ 448
>At2g36060.1 68415.m04427 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 145
Score = 51.6 bits (118), Expect = 5e-07
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Frame = +3
Query: 279 WNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGGIC----LDI 446
W I GPH+T E ++L + ++YP KPPTVRF S++ V D G+ +
Sbjct: 48 WTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRINMTCVNHDTGVVDSKKFGV 107
Query: 447 LQNRWSPTYDVSAILTSIQ 503
L N W Y + ILT ++
Sbjct: 108 LAN-WQRQYTMEDILTQLK 125
>At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family
protein low similarity to ubiquitin-conjugating
BIR-domain enzyme APOLLON [Homo sapiens] GI:8489831,
ubiquitin-conjugating enzyme [Mus musculus] GI:3319990;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 907
Score = 50.4 bits (115), Expect = 1e-06
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = +3
Query: 285 AVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVS--KMFHPNVYADGGICLDILQNR 458
A + G TP+ DG F I +YP++PP V + S +PN+Y G +CL +L N
Sbjct: 696 AALVGAPGTPYHDGLFFFDIMLPPQYPHEPPMVHYHSGGMRLNPNLYESGRVCLSLL-NT 754
Query: 459 WS 464
WS
Sbjct: 755 WS 756
>At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family protein
low similarity to ubiquitin-conjugating BIR-domain enzyme
APOLLON [Homo sapiens] GI:8489831, ubiquitin-conjugating
enzyme [Mus musculus] GI:3319990; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 1102
Score = 50.4 bits (115), Expect = 1e-06
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Frame = +3
Query: 261 DNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSK--MFHPNVYADGGI 434
++ + + AVI G TP++DG F +YP+ PP+ + S +PN+Y +G +
Sbjct: 876 EDRMDLLRAVIVGAFGTPYQDGLFFFDFHLPSDYPSVPPSAYYHSGGWRLNPNLYEEGKV 935
Query: 435 CLDILQNRWS 464
CL +L N W+
Sbjct: 936 CLSLL-NTWT 944
>At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative
similar to Non-Canonical UBiquitin Conjugating Enzyme 1
(NCUBE1) from [Gallus gallus] GI:7362937, [Mus musculus]
GI:7363050, [Homo sapiens] GI:7362973; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 309
Score = 49.6 bits (113), Expect = 2e-06
Identities = 31/110 (28%), Positives = 48/110 (43%), Gaps = 4/110 (3%)
Frame = +3
Query: 255 PTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGGI 434
P + NI W I GP DT FE G + I+ +YP KPP+ ++ + + I
Sbjct: 35 PLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPADYPFKPPSFMLLTP--NGRFETNTKI 92
Query: 435 CLDILQ---NRWSPTYDVSAILTSIQSF-*VIPTQTLQQIRWPHSFTRRI 572
CL I W P++ V L ++ +F P L + +P R +
Sbjct: 93 CLSISNYHPEHWQPSWSVRTALVALIAFMPTSPNGALGSVDYPKDERRTL 142
>At2g36060.2 68415.m04428 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 146
Score = 48.0 bits (109), Expect = 7e-06
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Frame = +3
Query: 279 WNAVIFGPHDTPFEDGT-FKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGGIC----LD 443
W I GPH+ +G ++L + ++YP KPPTVRF S++ V D G+
Sbjct: 48 WTGTIIGPHNVTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRINMTCVNHDTGVVDSKKFG 107
Query: 444 ILQNRWSPTYDVSAILTSIQ 503
+L N W Y + ILT ++
Sbjct: 108 VLAN-WQRQYTMEDILTQLK 126
>At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 159
Score = 48.0 bits (109), Expect = 7e-06
Identities = 20/52 (38%), Positives = 30/52 (57%)
Frame = +3
Query: 279 WNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGGI 434
W I GPH+T +E F+L + ++YP PPTVRF S++ V + G+
Sbjct: 47 WTGTILGPHNTAYEGKIFQLKLFCGKDYPESPPTVRFQSRINMACVNPENGV 98
>At3g52560.1 68416.m05784 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 146
Score = 47.6 bits (108), Expect = 9e-06
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
Frame = +3
Query: 279 WNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGGIC----LDI 446
W I GPH+T E ++L + ++YP KPPTVRF S++ V + G+ +
Sbjct: 49 WTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRVNMACVNHETGVVDPKKFGL 108
Query: 447 LQNRWSPTYDVSAILTSIQ 503
L N W Y + IL ++
Sbjct: 109 LAN-WQREYTMEDILVQLK 126
>At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 158
Score = 45.2 bits (102), Expect = 5e-05
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Frame = +3
Query: 279 WNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGGI---CLDIL 449
W I GP +T +E F+L + +EYP PPTVRF +++ V + G+ L +
Sbjct: 47 WTGTILGPPNTAYEGKIFQLKLFCGKEYPESPPTVRFQTRINMACVNPETGVVEPSLFPM 106
Query: 450 QNRWSPTYDVSAILTSIQ 503
W Y + IL ++
Sbjct: 107 LTNWRREYTMEDILVKLK 124
>At3g52560.2 68416.m05785 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 147
Score = 44.0 bits (99), Expect = 1e-04
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Frame = +3
Query: 279 WNAVIFGPHDTPFEDGT-FKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGGIC----LD 443
W I GPH+ +G ++L + ++YP KPPTVRF S++ V + G+
Sbjct: 49 WTGTIIGPHNVTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRVNMACVNHETGVVDPKKFG 108
Query: 444 ILQNRWSPTYDVSAILTSIQ 503
+L N W Y + IL ++
Sbjct: 109 LLAN-WQREYTMEDILVQLK 127
>At3g60650.1 68416.m06786 expressed protein
Length = 107
Score = 32.3 bits (70), Expect = 0.36
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +2
Query: 395 KNVSSKCLRRWWNLPRYPAKQMES 466
K VSSK + R W +P+YP KQ +S
Sbjct: 62 KKVSSKRVSRTWKIPKYPKKQPKS 85
>At5g50990.1 68418.m06322 pentatricopeptide (PPR) repeat-containing
protein contains INTERPRO:IPR002885 PPR repeats
Length = 511
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = +3
Query: 228 GSTYRCVRSPTDNNIMIWNAVIFG-PHDTPFEDG--TFKLTIEFTEEYPNK 371
G + +R+ +D N++ WN +I G + +E+ K + FT+ PNK
Sbjct: 92 GLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNK 142
>At1g77850.1 68414.m09072 transcriptional factor B3 family protein
similar to auxin response factor 10 GI:6165644 from
[Arabidopsis thaliana]; contains Pfam profile PF02362:
B3 DNA binding domain
Length = 585
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -3
Query: 169 FSIPKFYHNEIFLLLSWSNFDTVIQKLCITNVR-IKWTF 56
FS+P+F + +F LL++ D +QKL +T++ W F
Sbjct: 134 FSVPRFCADSVFPLLNF-QIDPPVQKLYVTDIHGAVWDF 171
>At5g26120.1 68418.m03107 glycosyl hydrolase family protein 51
similar to arabinoxylan arabinofuranohydrolase isoenzyme
AXAH-II from GI:13398414 [Hordeum vulgare]
Length = 674
Score = 28.7 bits (61), Expect = 4.4
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = -1
Query: 747 YASNKIYNLHSHSNECMYTPVSSATLLDVTLTNKVSSVPC*SIN 616
+ S+ +Y S+ + +T S ATLL+ TL K SSV +I+
Sbjct: 521 FNSSHLYGTPSYWVQHFFTESSGATLLNSTLKGKTSSVEASAIS 564
>At4g29490.1 68417.m04208 Xaa-Pro dipeptidase, putative / prolidase,
putative / imidodipeptidase, putative similar to
SP|P12955 Xaa-Pro dipeptidase (EC 3.4.13.9) (X-Pro
dipeptidase) (Proline dipeptidase) (Prolidase)
(Imidodipeptidase) {Homo sapiens}; contains Pfam
profiles PF00557: metallopeptidase family M24, PF05195:
Aminopeptidase P, N-terminal domain
Length = 333
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +3
Query: 225 RGSTYRCVRSPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEY 362
R +Y C+ + DN+ ++ P+D FEDG L ++ EY
Sbjct: 235 RHCSYTCICATGDNSAVLHYGHAAAPNDRTFEDGDLAL-LDMGAEY 279
>At1g18700.1 68414.m02333 DNAJ heat shock N-terminal
domain-containing protein low similarity to SP|Q9QYI8
DnaJ homolog subfamily B member 7 Mus musculus; contains
Pfam profile PF00226 DnaJ domain
Length = 700
Score = 27.9 bits (59), Expect = 7.7
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +2
Query: 512 SDPNPNSPANSMAAQLYKENRREYEKR 592
+ P+PN PA+++ + KE +RE +R
Sbjct: 644 NQPSPNQPADNVEEKKKKERKREQRRR 670
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,204,713
Number of Sequences: 28952
Number of extensions: 377131
Number of successful extensions: 1064
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 971
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1048
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1692519896
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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