Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30878
(734 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127647-1|ABL74413.1| 213|Anopheles gambiae Rab5 protein. 86 9e-19
AJ438610-3|CAD27475.1| 190|Anopheles gambiae putative RHO small... 47 5e-07
EU068741-1|ABU40241.1| 993|Anopheles gambiae anion exchanger pr... 26 1.1
AJ439060-1|CAD27752.1| 763|Anopheles gambiae hypothetical prote... 25 2.4
AJ438610-9|CAD27481.1| 763|Anopheles gambiae hypothetical prote... 25 2.4
M93691-1|AAA29366.1| 574|Anopheles gambiae protein ( Anopheles ... 24 5.6
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos... 24 5.6
AY705394-1|AAU12503.1| 557|Anopheles gambiae nicotinic acetylch... 24 5.6
AJ130951-1|CAA10260.1| 189|Anopheles gambiae SG3 protein protein. 24 5.6
AF004915-1|AAB94671.1| 688|Anopheles gambiae pro-phenol oxidase... 24 5.6
>EF127647-1|ABL74413.1| 213|Anopheles gambiae Rab5 protein.
Length = 213
Score = 86.2 bits (204), Expect = 9e-19
Identities = 38/72 (52%), Positives = 53/72 (73%)
Frame = +3
Query: 255 VLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYR 434
VL+G+S VGKSSL+ RF + +F+ +STIG F T+++ +D T+K +IWDTAGQERY
Sbjct: 28 VLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCIDDTTVKFEIWDTAGQERYH 87
Query: 435 AITSAYYRGAWA 470
++ YYRGA A
Sbjct: 88 SLAPMYYRGAQA 99
Score = 60.9 bits (141), Expect = 4e-11
Identities = 30/68 (44%), Positives = 43/68 (63%)
Frame = +1
Query: 523 WLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPA 702
W++EL+ A NI+I L GNK+DL + R + EEAK +A+ N L F+ETSA + NV
Sbjct: 118 WVKELQRQASPNIVIALAGNKADLANSRVVDYEEAKQYADDNRLLFMETSAKTAVNVNDI 177
Query: 703 FQNILTEI 726
F I ++
Sbjct: 178 FLAIAKKL 185
>AJ438610-3|CAD27475.1| 190|Anopheles gambiae putative RHO small
GTPase protein.
Length = 190
Score = 47.2 bits (107), Expect = 5e-07
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Frame = +3
Query: 246 VQSVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQE 425
++ V++GD VGK+ +L +T + F E T ++ + VDG + +WDTAGQE
Sbjct: 7 IKCVVVGDGTVGKTCMLISYTTDSFPGEYVPTSFDNYSAPMV-VDGVQVSLGLWDTAGQE 65
Query: 426 RYRAITSAYY--RGAWARCWFTTSPST 500
Y + Y + C+ SPS+
Sbjct: 66 DYDRLRPLSYPQTDVFLICYSVASPSS 92
>EU068741-1|ABU40241.1| 993|Anopheles gambiae anion exchanger
protein.
Length = 993
Score = 26.2 bits (55), Expect = 1.1
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = -2
Query: 394 FMVLPSTSILLVANSTPMVDLDSKLNSFLVKRDRRLL 284
F +L +L++ + P+V D LN F + D L
Sbjct: 493 FHLLAGQPLLIIGTTGPLVLFDEALNQFCISNDFNFL 529
>AJ439060-1|CAD27752.1| 763|Anopheles gambiae hypothetical protein
protein.
Length = 763
Score = 25.0 bits (52), Expect = 2.4
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -2
Query: 718 SECSGRPARRWWSPGPTSR 662
S+ G P+RRW G T R
Sbjct: 108 SDAGGEPSRRWTRSGATGR 126
>AJ438610-9|CAD27481.1| 763|Anopheles gambiae hypothetical protein
protein.
Length = 763
Score = 25.0 bits (52), Expect = 2.4
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -2
Query: 718 SECSGRPARRWWSPGPTSR 662
S+ G P+RRW G T R
Sbjct: 108 SDAGGEPSRRWTRSGATGR 126
>M93691-1|AAA29366.1| 574|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 574
Score = 23.8 bits (49), Expect = 5.6
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +2
Query: 395 SSDMGHGRPGAVPRHHVGVLPRRVGA 472
++ +G G+P A PR LPRR A
Sbjct: 189 AAKVGGGQPSASPRQPPTPLPRRSSA 214
>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
polyprotein protein.
Length = 1726
Score = 23.8 bits (49), Expect = 5.6
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -3
Query: 657 TKSVGFRERFRLLRRDGPKMPEI 589
TK + F++RF + D +MPE+
Sbjct: 138 TKWLTFKDRFSSMVHDSTEMPEV 160
>AY705394-1|AAU12503.1| 557|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 1 protein.
Length = 557
Score = 23.8 bits (49), Expect = 5.6
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 63 NHN*KVMLKEPCIVL*ICDICVQYY 137
+H KV+ K P I C+I V+Y+
Sbjct: 131 HHTGKVVWKPPAIYKSFCEIDVEYF 155
>AJ130951-1|CAA10260.1| 189|Anopheles gambiae SG3 protein protein.
Length = 189
Score = 23.8 bits (49), Expect = 5.6
Identities = 9/12 (75%), Positives = 9/12 (75%), Gaps = 1/12 (8%)
Frame = -2
Query: 706 GRPARRWWS-PG 674
GRP R WWS PG
Sbjct: 77 GRPGRPWWSVPG 88
>AF004915-1|AAB94671.1| 688|Anopheles gambiae pro-phenol oxidase
subunit 1 protein.
Length = 688
Score = 23.8 bits (49), Expect = 5.6
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +1
Query: 505 VQNVERWLRELRDHADQNILIMLVGNKSDLRHLRSI 612
V ++ERW + + DQ ++ GN+ L R I
Sbjct: 306 VNDLERWRDRIHEAIDQGFVLDKSGNRIMLDEQRGI 341
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 697,901
Number of Sequences: 2352
Number of extensions: 13239
Number of successful extensions: 23
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75260343
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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