Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30877
(760 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118870-1|AAM50730.1| 235|Drosophila melanogaster GM27569p pro... 97 3e-20
AE013599-1113|AAF58784.1| 235|Drosophila melanogaster CG11761-P... 97 3e-20
AY392453-1|AAQ84213.1| 89|Drosophila melanogaster translin pro... 91 2e-18
BT023498-1|AAY84898.1| 1190|Drosophila melanogaster LD32453p pro... 36 0.045
AY069344-1|AAL39489.2| 985|Drosophila melanogaster LD05471p pro... 36 0.045
AF179287-1|AAD52673.1| 1179|Drosophila melanogaster SMC2 protein. 36 0.045
AE013599-1965|AAF58197.1| 1179|Drosophila melanogaster CG10212-P... 36 0.045
AL138972-4|CAB72287.1| 435|Drosophila melanogaster EG:BACR25B3.... 31 1.7
AE014298-404|AAF45787.2| 4629|Drosophila melanogaster CG33950-PF... 31 1.7
AY113617-1|AAM29622.1| 359|Drosophila melanogaster RH65663p pro... 31 2.3
AE014297-4194|AAF56759.1| 359|Drosophila melanogaster CG12259-P... 31 2.3
AE014134-2005|AAN10771.1| 1070|Drosophila melanogaster CG16833-P... 30 3.9
AE014134-2004|AAN10770.1| 1070|Drosophila melanogaster CG16833-P... 30 3.9
>AY118870-1|AAM50730.1| 235|Drosophila melanogaster GM27569p
protein.
Length = 235
Score = 96.7 bits (230), Expect = 3e-20
Identities = 46/56 (82%), Positives = 48/56 (85%)
Frame = +3
Query: 510 SELSRLAVNSVTRGDYERPLRISKFVMELNAGFRLLNLKNDHLRKRFDALKYDVKK 677
SELSR A NSVT GDYERPL IS F+ +LN GFRLLNLKND LRKRFDALKYDVKK
Sbjct: 150 SELSRFATNSVTMGDYERPLNISHFIGDLNTGFRLLNLKNDGLRKRFDALKYDVKK 205
Score = 91.5 bits (217), Expect = 1e-18
Identities = 38/78 (48%), Positives = 56/78 (71%)
Frame = +1
Query: 277 YARLKDAVPPTDYFKYQDHWRFMTQRYCYLIALTIWLEKGILASHETMAXILGVSPVELK 456
Y +L + VP Y++Y DHW F+TQR ++IAL I+LE G L + ET+A +LG+ +
Sbjct: 73 YQKLAELVPAGQYYRYSDHWTFITQRLIFIIALVIYLEAGFLVTRETVAEMLGLK-ISQS 131
Query: 457 EGFHLDIEDYLIGLLTMS 510
EGFHLD+EDYL+G+L ++
Sbjct: 132 EGFHLDVEDYLLGILQLA 149
Score = 62.5 bits (145), Expect = 6e-10
Identities = 28/55 (50%), Positives = 41/55 (74%)
Frame = +2
Query: 86 IFSDFQKNLDQEQELRETIRTICQEVDQISREATTVLQVIHYNDAGISPACGKAR 250
IFS++QK +D EQE+RE IR + +E++ +S+EA LQ+IH + + IS ACG AR
Sbjct: 9 IFSNYQKYIDNEQEVRENIRIVVREIEHLSKEAQIKLQIIHSDLSQISAACGLAR 63
Score = 30.3 bits (65), Expect = 3.0
Identities = 13/15 (86%), Positives = 15/15 (100%)
Frame = +2
Query: 671 KEIEEVVYDLSIRGL 715
K+IEEVVYD+SIRGL
Sbjct: 204 KKIEEVVYDVSIRGL 218
>AE013599-1113|AAF58784.1| 235|Drosophila melanogaster CG11761-PA
protein.
Length = 235
Score = 96.7 bits (230), Expect = 3e-20
Identities = 46/56 (82%), Positives = 48/56 (85%)
Frame = +3
Query: 510 SELSRLAVNSVTRGDYERPLRISKFVMELNAGFRLLNLKNDHLRKRFDALKYDVKK 677
SELSR A NSVT GDYERPL IS F+ +LN GFRLLNLKND LRKRFDALKYDVKK
Sbjct: 150 SELSRFATNSVTMGDYERPLNISHFIGDLNTGFRLLNLKNDGLRKRFDALKYDVKK 205
Score = 91.5 bits (217), Expect = 1e-18
Identities = 38/78 (48%), Positives = 56/78 (71%)
Frame = +1
Query: 277 YARLKDAVPPTDYFKYQDHWRFMTQRYCYLIALTIWLEKGILASHETMAXILGVSPVELK 456
Y +L + VP Y++Y DHW F+TQR ++IAL I+LE G L + ET+A +LG+ +
Sbjct: 73 YQKLAELVPAGQYYRYSDHWTFITQRLIFIIALVIYLEAGFLVTRETVAEMLGLK-ISQS 131
Query: 457 EGFHLDIEDYLIGLLTMS 510
EGFHLD+EDYL+G+L ++
Sbjct: 132 EGFHLDVEDYLLGILQLA 149
Score = 62.5 bits (145), Expect = 6e-10
Identities = 28/55 (50%), Positives = 41/55 (74%)
Frame = +2
Query: 86 IFSDFQKNLDQEQELRETIRTICQEVDQISREATTVLQVIHYNDAGISPACGKAR 250
IFS++QK +D EQE+RE IR + +E++ +S+EA LQ+IH + + IS ACG AR
Sbjct: 9 IFSNYQKYIDNEQEVRENIRIVVREIEHLSKEAQIKLQIIHSDLSQISAACGLAR 63
Score = 30.3 bits (65), Expect = 3.0
Identities = 13/15 (86%), Positives = 15/15 (100%)
Frame = +2
Query: 671 KEIEEVVYDLSIRGL 715
K+IEEVVYD+SIRGL
Sbjct: 204 KKIEEVVYDVSIRGL 218
>AY392453-1|AAQ84213.1| 89|Drosophila melanogaster translin
protein.
Length = 89
Score = 90.6 bits (215), Expect = 2e-18
Identities = 38/75 (50%), Positives = 54/75 (72%)
Frame = +1
Query: 277 YARLKDAVPPTDYFKYQDHWRFMTQRYCYLIALTIWLEKGILASHETMAXILGVSPVELK 456
Y +L + VP Y++Y DHW F+TQR ++IAL I+LE G L + ET+A +LG+ +
Sbjct: 15 YQKLAELVPAGQYYRYSDHWTFITQRLIFIIALVIYLEAGFLVTRETVAEMLGLK-ISQS 73
Query: 457 EGFHLDIEDYLIGLL 501
EGFHLD+EDYL+G+L
Sbjct: 74 EGFHLDVEDYLLGIL 88
>BT023498-1|AAY84898.1| 1190|Drosophila melanogaster LD32453p
protein.
Length = 1190
Score = 36.3 bits (80), Expect = 0.045
Identities = 20/65 (30%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Frame = +2
Query: 17 NKIKESRLLIKH-VKMCDNELINKIFSDFQKNLDQEQELRETIRTICQE-VDQISREATT 190
NK+KE+ L +H + MC+N L + FQ+N + +E+RE ++T+ Q+ +D ++ T+
Sbjct: 722 NKMKENLDLRQHELTMCENRLAQ---TTFQQNQAEIEEMRERVKTLEQQIIDSREKQKTS 778
Query: 191 VLQVI 205
+++
Sbjct: 779 QAKIV 783
>AY069344-1|AAL39489.2| 985|Drosophila melanogaster LD05471p
protein.
Length = 985
Score = 36.3 bits (80), Expect = 0.045
Identities = 20/65 (30%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Frame = +2
Query: 17 NKIKESRLLIKH-VKMCDNELINKIFSDFQKNLDQEQELRETIRTICQE-VDQISREATT 190
NK+KE+ L +H + MC+N L + FQ+N + +E+RE ++T+ Q+ +D ++ T+
Sbjct: 517 NKMKENLDLRQHELTMCENRLAQ---TTFQQNQAEIEEMRERVKTLEQQIIDSREKQKTS 573
Query: 191 VLQVI 205
+++
Sbjct: 574 QAKIV 578
>AF179287-1|AAD52673.1| 1179|Drosophila melanogaster SMC2 protein.
Length = 1179
Score = 36.3 bits (80), Expect = 0.045
Identities = 20/65 (30%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Frame = +2
Query: 17 NKIKESRLLIKH-VKMCDNELINKIFSDFQKNLDQEQELRETIRTICQE-VDQISREATT 190
NK+KE+ L +H + MC+N L + FQ+N + +E+RE ++T+ Q+ +D ++ T+
Sbjct: 711 NKMKENLDLRQHELTMCENRLAQ---TTFQQNQAEIEEMRERVKTLEQQIIDSREKQKTS 767
Query: 191 VLQVI 205
+++
Sbjct: 768 QAKIV 772
>AE013599-1965|AAF58197.1| 1179|Drosophila melanogaster CG10212-PA
protein.
Length = 1179
Score = 36.3 bits (80), Expect = 0.045
Identities = 20/65 (30%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Frame = +2
Query: 17 NKIKESRLLIKH-VKMCDNELINKIFSDFQKNLDQEQELRETIRTICQE-VDQISREATT 190
NK+KE+ L +H + MC+N L + FQ+N + +E+RE ++T+ Q+ +D ++ T+
Sbjct: 711 NKMKENLDLRQHELTMCENRLAQ---TTFQQNQAEIEEMRERVKTLEQQIIDSREKQKTS 767
Query: 191 VLQVI 205
+++
Sbjct: 768 QAKIV 772
>AL138972-4|CAB72287.1| 435|Drosophila melanogaster EG:BACR25B3.2
protein.
Length = 435
Score = 31.1 bits (67), Expect = 1.7
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = +2
Query: 56 KMCDNELINKIFSDFQKNLDQEQELRETIRTI 151
K+ D++L N S+++ N D+EQE+R T+ +
Sbjct: 194 KLLDDDLRNFFHSNYEGNDDEEQEIRSTLERV 225
>AE014298-404|AAF45787.2| 4629|Drosophila melanogaster CG33950-PF,
isoform F protein.
Length = 4629
Score = 31.1 bits (67), Expect = 1.7
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = +2
Query: 56 KMCDNELINKIFSDFQKNLDQEQELRETIRTI 151
K+ D++L N S+++ N D+EQE+R T+ +
Sbjct: 253 KLLDDDLRNFFHSNYEGNDDEEQEIRSTLERV 284
>AY113617-1|AAM29622.1| 359|Drosophila melanogaster RH65663p
protein.
Length = 359
Score = 30.7 bits (66), Expect = 2.3
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +2
Query: 20 KIKESRLLIKHVKMCDNELINKIFSDFQKNLDQEQELRETIR 145
+IKE L IK K+C N ++ F ++ +QE LRE +R
Sbjct: 156 EIKEDILPIKKKKICKNPDVDTSFLPDREREEQENRLREQLR 197
>AE014297-4194|AAF56759.1| 359|Drosophila melanogaster CG12259-PA
protein.
Length = 359
Score = 30.7 bits (66), Expect = 2.3
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +2
Query: 20 KIKESRLLIKHVKMCDNELINKIFSDFQKNLDQEQELRETIR 145
+IKE L IK K+C N ++ F ++ +QE LRE +R
Sbjct: 156 EIKEDILPIKKKKICKNPDVDTSFLPDREREEQENRLREQLR 197
>AE014134-2005|AAN10771.1| 1070|Drosophila melanogaster CG16833-PC,
isoform C protein.
Length = 1070
Score = 29.9 bits (64), Expect = 3.9
Identities = 23/73 (31%), Positives = 30/73 (41%)
Frame = -1
Query: 727 RPWQQPPDAEIVDHFLYFFTSYFRASKRLRK*SFFKFNSLKPAFSSITNLEILRGRS*SP 548
RP Q + H+ +F Y R +++L K +F NS K S R S
Sbjct: 203 RPVQYQTTNQHYQHYFSYF--YNRGAEKLSKPTFAAANSRKVPMSKFQKAGASRRDSREV 260
Query: 547 RVTEFTARRDNSE 509
T RRDNSE
Sbjct: 261 DGTVIIGRRDNSE 273
>AE014134-2004|AAN10770.1| 1070|Drosophila melanogaster CG16833-PB,
isoform B protein.
Length = 1070
Score = 29.9 bits (64), Expect = 3.9
Identities = 23/73 (31%), Positives = 30/73 (41%)
Frame = -1
Query: 727 RPWQQPPDAEIVDHFLYFFTSYFRASKRLRK*SFFKFNSLKPAFSSITNLEILRGRS*SP 548
RP Q + H+ +F Y R +++L K +F NS K S R S
Sbjct: 203 RPVQYQTTNQHYQHYFSYF--YNRGAEKLSKPTFAAANSRKVPMSKFQKAGASRRDSREV 260
Query: 547 RVTEFTARRDNSE 509
T RRDNSE
Sbjct: 261 DGTVIIGRRDNSE 273
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,213,971
Number of Sequences: 53049
Number of extensions: 618938
Number of successful extensions: 1924
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1921
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3478915869
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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