Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30875X
         (352 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       21   3.2  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    21   3.2  
DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex det...    20   7.4  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              20   7.4  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          20   9.8  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      20   9.8  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    20   9.8  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    20   9.8  

>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 21.4 bits (43), Expect = 3.2
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = -1

Query: 232 VAFNFFPNEFQQIQYELLWVLNRKVRLFVVYVNVYST 122
           V FN FP    +I Y L  ++       VV +  Y++
Sbjct: 190 VTFNAFPTYTHEITYSLFGMIMMYWFPLVVIIYTYTS 226


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.4 bits (43), Expect = 3.2
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = +3

Query: 141 YTTNSLTFLLRTHNSSYW 194
           YTTN     L T  S YW
Sbjct: 127 YTTNESHACLSTGGSCYW 144


>DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 8/20 (40%), Positives = 8/20 (40%)
 Frame = -3

Query: 68  PPLXSWPWCSAARLVIRLAC 9
           PP    PW S    V R  C
Sbjct: 131 PPRPMGPWISVQEQVPRFRC 150


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +3

Query: 144  TTNSLTFLLRTH 179
            TTNSLT  +R H
Sbjct: 1378 TTNSLTMKVRPH 1389


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = +2

Query: 158 DFPIENPQQFILDLLKFVREEVKGDMT 238
           DF  E P     D+L + ++E   ++T
Sbjct: 657 DFNYEGPNMLFKDILIYHKDEFDMNIT 683


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = +2

Query: 158 DFPIENPQQFILDLLKFVREEVKGDMT 238
           DF  E P     D+L + ++E   ++T
Sbjct: 657 DFNYEGPNMLFKDILIYHKDEFDMNIT 683


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = -3

Query: 242 PWSCRL*LLPE 210
           PWSCR   L E
Sbjct: 925 PWSCRCKFLQE 935


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 5/12 (41%), Positives = 9/12 (75%)
 Frame = -2

Query: 177 GFSIGKSGCSLY 142
           GF++G  GC ++
Sbjct: 112 GFALGNLGCQIF 123


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,558
Number of Sequences: 438
Number of extensions: 1902
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8060325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)