Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30871
(657 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 182 2e-46
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 182 2e-46
SB_56| Best HMM Match : Actin (HMM E-Value=0) 182 2e-46
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 182 2e-46
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 182 2e-46
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 176 1e-44
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 169 2e-42
SB_54| Best HMM Match : Actin (HMM E-Value=0) 138 5e-33
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 117 1e-26
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 105 3e-23
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 86 3e-17
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 78 5e-15
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 72 5e-13
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 64 1e-10
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 46 3e-05
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.62
SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12) 30 1.9
SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_22850| Best HMM Match : CXC (HMM E-Value=0.22) 30 1.9
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 30 1.9
SB_48528| Best HMM Match : Extensin_2 (HMM E-Value=1) 29 2.5
SB_51831| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_11339| Best HMM Match : TGF_beta (HMM E-Value=5.60519e-45) 29 3.3
SB_6983| Best HMM Match : rve (HMM E-Value=0.011) 29 3.3
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_25899| Best HMM Match : Ribonuc_2-5A (HMM E-Value=0) 29 4.4
SB_22949| Best HMM Match : rve (HMM E-Value=1.2e-19) 29 4.4
SB_8858| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088) 29 4.4
SB_51860| Best HMM Match : ShTK (HMM E-Value=1.5e-09) 28 5.8
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38) 28 5.8
SB_30023| Best HMM Match : DUF1250 (HMM E-Value=6.9) 28 5.8
SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4) 28 5.8
SB_10665| Best HMM Match : PT (HMM E-Value=6.2) 28 5.8
SB_10324| Best HMM Match : IFP_35_N (HMM E-Value=0.1) 28 5.8
SB_6481| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_7076| Best HMM Match : IncA (HMM E-Value=0.74) 28 5.8
SB_24841| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_21667| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_41600| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 28 7.7
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 182 bits (443), Expect = 2e-46
Identities = 83/84 (98%), Positives = 84/84 (100%)
Frame = +2
Query: 2 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 181
AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 118
Query: 182 KMTQIMFETFNTPAMYVAIQAVLS 253
KMTQIMFETFN+PAMYVAIQAVLS
Sbjct: 119 KMTQIMFETFNSPAMYVAIQAVLS 142
Score = 176 bits (428), Expect = 1e-44
Identities = 86/97 (88%), Positives = 90/97 (92%)
Frame = +1
Query: 256 YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 435
YASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERGYSFTT
Sbjct: 144 YASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKILTERGYSFTT 203
Query: 436 TAEREIVRDIKEKLCYVALDFEQERPPLHPAAPSRSL 546
TAEREIVRDIKEKLCYVALDFEQE + AA S SL
Sbjct: 204 TAEREIVRDIKEKLCYVALDFEQE---METAASSSSL 237
Score = 99.1 bits (236), Expect = 3e-21
Identities = 45/48 (93%), Positives = 47/48 (97%)
Frame = +3
Query: 513 TAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHE 656
TAASSSSLEKSYELPDGQVITIGNERFRCPEA+FQPSFLGME+ GIHE
Sbjct: 230 TAASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHE 277
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 182 bits (443), Expect = 2e-46
Identities = 83/84 (98%), Positives = 84/84 (100%)
Frame = +2
Query: 2 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 181
AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE
Sbjct: 58 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 117
Query: 182 KMTQIMFETFNTPAMYVAIQAVLS 253
KMTQIMFETFN+PAMYVAIQAVLS
Sbjct: 118 KMTQIMFETFNSPAMYVAIQAVLS 141
Score = 172 bits (419), Expect = 2e-43
Identities = 86/97 (88%), Positives = 89/97 (91%)
Frame = +1
Query: 256 YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 435
YASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT
Sbjct: 143 YASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 202
Query: 436 TAEREIVRDIKEKLCYVALDFEQERPPLHPAAPSRSL 546
TAEREIVRDIKEKL YVALDFEQE + AA S SL
Sbjct: 203 TAEREIVRDIKEKLAYVALDFEQE---MATAAASSSL 236
Score = 99.5 bits (237), Expect = 2e-21
Identities = 45/49 (91%), Positives = 48/49 (97%)
Frame = +3
Query: 510 ATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHE 656
ATAA+SSSLEKSYELPDGQVITIGNERFRCPEA+FQPSFLGME+ GIHE
Sbjct: 228 ATAAASSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHE 276
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 182 bits (443), Expect = 2e-46
Identities = 83/84 (98%), Positives = 84/84 (100%)
Frame = +2
Query: 2 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 181
AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE
Sbjct: 58 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 117
Query: 182 KMTQIMFETFNTPAMYVAIQAVLS 253
KMTQIMFETFN+PAMYVAIQAVLS
Sbjct: 118 KMTQIMFETFNSPAMYVAIQAVLS 141
Score = 177 bits (430), Expect = 9e-45
Identities = 87/97 (89%), Positives = 90/97 (92%)
Frame = +1
Query: 256 YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 435
YASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT
Sbjct: 143 YASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 202
Query: 436 TAEREIVRDIKEKLCYVALDFEQERPPLHPAAPSRSL 546
TAEREIVRDIKEKLCYVALDFEQE + AA S SL
Sbjct: 203 TAEREIVRDIKEKLCYVALDFEQE---MQTAASSSSL 236
Score = 99.1 bits (236), Expect = 3e-21
Identities = 45/48 (93%), Positives = 47/48 (97%)
Frame = +3
Query: 513 TAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHE 656
TAASSSSLEKSYELPDGQVITIGNERFRCPEA+FQPSFLGME+ GIHE
Sbjct: 229 TAASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHE 276
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 182 bits (443), Expect = 2e-46
Identities = 83/84 (98%), Positives = 84/84 (100%)
Frame = +2
Query: 2 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 181
AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 118
Query: 182 KMTQIMFETFNTPAMYVAIQAVLS 253
KMTQIMFETFN+PAMYVAIQAVLS
Sbjct: 119 KMTQIMFETFNSPAMYVAIQAVLS 142
Score = 176 bits (428), Expect = 1e-44
Identities = 87/97 (89%), Positives = 90/97 (92%)
Frame = +1
Query: 256 YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 435
YASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT
Sbjct: 144 YASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 203
Query: 436 TAEREIVRDIKEKLCYVALDFEQERPPLHPAAPSRSL 546
TAEREIVRDIKEKLCYVALDFEQE + AA S SL
Sbjct: 204 TAEREIVRDIKEKLCYVALDFEQE---MTTAASSSSL 237
Score = 99.1 bits (236), Expect = 3e-21
Identities = 45/48 (93%), Positives = 47/48 (97%)
Frame = +3
Query: 513 TAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHE 656
TAASSSSLEKSYELPDGQVITIGNERFRCPEA+FQPSFLGME+ GIHE
Sbjct: 230 TAASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHE 277
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 182 bits (443), Expect = 2e-46
Identities = 83/84 (98%), Positives = 84/84 (100%)
Frame = +2
Query: 2 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 181
AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 118
Query: 182 KMTQIMFETFNTPAMYVAIQAVLS 253
KMTQIMFETFN+PAMYVAIQAVLS
Sbjct: 119 KMTQIMFETFNSPAMYVAIQAVLS 142
Score = 96.3 bits (229), Expect = 2e-20
Identities = 44/48 (91%), Positives = 46/48 (95%)
Frame = +3
Query: 513 TAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHE 656
TAASSSS+EKSYELPDGQVITIGNERFRCPEAL QPSFLGME+ GIHE
Sbjct: 203 TAASSSSIEKSYELPDGQVITIGNERFRCPEALLQPSFLGMESSGIHE 250
Score = 72.9 bits (171), Expect = 2e-13
Identities = 38/56 (67%), Positives = 42/56 (75%)
Frame = +1
Query: 379 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQERPPLHPAAPSRSL 546
D + + I ERGYSFTTTAEREIVRDIKEKLCYVALDFEQE + AA S S+
Sbjct: 158 DGVSHTVPIYEERGYSFTTTAEREIVRDIKEKLCYVALDFEQE---MQTAASSSSI 210
Score = 56.0 bits (129), Expect = 3e-08
Identities = 26/30 (86%), Positives = 28/30 (93%), Gaps = 2/30 (6%)
Frame = +1
Query: 256 YASGRTTGIVLDSGDGVSHTVPIYE--GYA 339
YASGRTTGIV+DSGDGVSHTVPIYE GY+
Sbjct: 144 YASGRTTGIVMDSGDGVSHTVPIYEERGYS 173
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 176 bits (428), Expect = 1e-44
Identities = 86/97 (88%), Positives = 90/97 (92%)
Frame = +1
Query: 256 YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 435
YASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERGYSFTT
Sbjct: 106 YASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKILTERGYSFTT 165
Query: 436 TAEREIVRDIKEKLCYVALDFEQERPPLHPAAPSRSL 546
TAEREIVRDIKEKLCYVALDFEQE + AA S SL
Sbjct: 166 TAEREIVRDIKEKLCYVALDFEQE---MQTAASSSSL 199
Score = 99.1 bits (236), Expect = 3e-21
Identities = 45/48 (93%), Positives = 47/48 (97%)
Frame = +3
Query: 513 TAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHE 656
TAASSSSLEKSYELPDGQVITIGNERFRCPEA+FQPSFLGME+ GIHE
Sbjct: 192 TAASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHE 239
Score = 67.7 bits (158), Expect = 8e-12
Identities = 30/33 (90%), Positives = 30/33 (90%)
Frame = +2
Query: 2 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 100
AQSKRGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 58 AQSKRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 45.6 bits (103), Expect = 4e-05
Identities = 21/27 (77%), Positives = 24/27 (88%)
Frame = +2
Query: 173 NREKMTQIMFETFNTPAMYVAIQAVLS 253
N + M +IMFETFN+PAMYVAIQAVLS
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLS 104
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 169 bits (410), Expect = 2e-42
Identities = 78/84 (92%), Positives = 81/84 (96%)
Frame = +1
Query: 256 YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 435
YASGRTTG+V DSGDGVSH VPIYEGYALPHAILRLDLAGRDLTDYLMK++TERGYSFTT
Sbjct: 22 YASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLAGRDLTDYLMKLMTERGYSFTT 81
Query: 436 TAEREIVRDIKEKLCYVALDFEQE 507
TAEREIVRDIKEKLCYVALDF QE
Sbjct: 82 TAEREIVRDIKEKLCYVALDFYQE 105
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/20 (85%), Positives = 19/20 (95%)
Frame = +2
Query: 194 IMFETFNTPAMYVAIQAVLS 253
IMFE FN+PA+YVAIQAVLS
Sbjct: 1 IMFEAFNSPAVYVAIQAVLS 20
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 138 bits (333), Expect = 5e-33
Identities = 59/84 (70%), Positives = 73/84 (86%)
Frame = +1
Query: 256 YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 435
YASGRTTG V D GDGVSHTVP+Y+GY LPHA R+DLAGRDLT YL +++TERGYSF +
Sbjct: 2188 YASGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLAGRDLTHYLQRLVTERGYSFQS 2247
Query: 436 TAEREIVRDIKEKLCYVALDFEQE 507
TAE++I+RD+KE LCY A+D+E+E
Sbjct: 2248 TAEQQIIRDLKETLCYCAMDYERE 2271
Score = 86.6 bits (205), Expect = 2e-17
Identities = 38/58 (65%), Positives = 48/58 (82%)
Frame = +2
Query: 80 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLS 253
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMA 2186
Score = 58.4 bits (135), Expect = 5e-09
Identities = 28/47 (59%), Positives = 31/47 (65%)
Frame = +3
Query: 516 AASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHE 656
A +S E Y LPDGQ I IG+ERFR E LFQPS LG + GIHE
Sbjct: 2275 AETSDDCEAPYMLPDGQSIRIGSERFRAAEPLFQPSLLGRDIDGIHE 2321
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 117 bits (281), Expect = 1e-26
Identities = 51/85 (60%), Positives = 66/85 (77%)
Frame = +1
Query: 256 YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 435
YA G TG+V+DSGDGV+H P+YEG+ALPH RLD+AGRD+T YL+K++ RGY+F
Sbjct: 147 YAQGLLTGVVIDSGDGVTHICPVYEGFALPHLTRRLDIAGRDITKYLIKLMLLRGYAFNH 206
Query: 436 TAEREIVRDIKEKLCYVALDFEQER 510
TA+ E VR +KEKLCYV + EQE+
Sbjct: 207 TADFETVRMMKEKLCYVGYNIEQEQ 231
Score = 93.5 bits (222), Expect = 1e-19
Identities = 41/85 (48%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANR 178
A R +L + YP+++GIV NWDDM+ +W +TF +++ + P VLLTE PLNP NR
Sbjct: 61 ASQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNR 120
Query: 179 EKMTQIMFETFNTPAMYVAIQAVLS 253
EKM ++MFE + +Y+AIQAVL+
Sbjct: 121 EKMIEVMFENYQFEGVYIAIQAVLT 145
Score = 50.8 bits (116), Expect = 1e-06
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +3
Query: 516 AASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHE 656
A ++ L + Y LPDG+V+ + ERF PEALFQP + +E G+ E
Sbjct: 234 ALETTVLVEQYTLPDGRVVKLSGERFEAPEALFQPHLINVEGVGVAE 280
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 105 bits (252), Expect = 3e-23
Identities = 45/73 (61%), Positives = 63/73 (86%)
Frame = +1
Query: 256 YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 435
YA+GRTTG+VLD+GDGVSH+VPIYEG+A+PH+I+R D+AGRD++ YL +L + G+ F +
Sbjct: 169 YATGRTTGVVLDAGDGVSHSVPIYEGFAMPHSIMRTDIAGRDVSRYLRLLLRKEGHCFHS 228
Query: 436 TAEREIVRDIKEK 474
++E EIVR IKE+
Sbjct: 229 SSELEIVRTIKEE 241
Score = 69.7 bits (163), Expect = 2e-12
Identities = 28/42 (66%), Positives = 37/42 (88%)
Frame = +2
Query: 128 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLS 253
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLS
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLS 167
>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
Length = 149
Score = 85.8 bits (203), Expect = 3e-17
Identities = 38/46 (82%), Positives = 43/46 (93%)
Frame = +3
Query: 519 ASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHE 656
A+S LEK+YELPDGQVI+IGNERFRCPEA+FQP+FLGMEA GIHE
Sbjct: 5 ANSPILEKTYELPDGQVISIGNERFRCPEAMFQPAFLGMEAPGIHE 50
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 78.2 bits (184), Expect = 5e-15
Identities = 41/104 (39%), Positives = 63/104 (60%), Gaps = 1/104 (0%)
Frame = +1
Query: 256 YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL-TERGYSFT 432
YASG T G+ L SG + IYEG+ L H + L++ G LT+ L + L +RG++FT
Sbjct: 773 YASGMTLGVCLSSGFSCTQAAVIYEGHTLNHTLQTLEIGGHHLTENLKQYLRDQRGHNFT 832
Query: 433 TTAEREIVRDIKEKLCYVALDFEQERPPLHPAAPSRSLTNFPTV 564
+++ +IV DIKEK+CY++ D +E +H + LT F T+
Sbjct: 833 SSSGWQIVNDIKEKICYLSKDHLKE---VHNYKTNEGLTKFYTL 873
Score = 36.3 bits (80), Expect = 0.022
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = +3
Query: 522 SSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFL 629
++ L K Y LPDGQ+I+IG E E LF+P L
Sbjct: 863 TNEGLTKFYTLPDGQMISIGYECISSMEPLFRPDLL 898
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 71.7 bits (168), Expect = 5e-13
Identities = 34/122 (27%), Positives = 62/122 (50%)
Frame = +1
Query: 274 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREI 453
TG V+DSGDGV+H +P+ EGY + I + +AGRD+T ++ ++L ER E
Sbjct: 62 TGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITFFVQQLLREREMGIPPEQSMET 121
Query: 454 VRDIKEKLCYVALDFEQERPPLHPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRSWV 633
+ IKE+ Y+ D +E + P++ + + ++ + ++ + P W+
Sbjct: 122 AKTIKERWGYICPDIAKEFAK-YEQEPAKWIKKYESINAVTTKILLRQFAKYEQEPAKWI 180
Query: 634 WK 639
K
Sbjct: 181 KK 182
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 64.1 bits (149), Expect = 1e-10
Identities = 26/72 (36%), Positives = 46/72 (63%)
Frame = +2
Query: 38 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 217
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 218 PAMYVAIQAVLS 253
PA ++ +VL+
Sbjct: 63 PAFFLCKNSVLT 74
Score = 48.4 bits (110), Expect = 5e-06
Identities = 22/54 (40%), Positives = 35/54 (64%)
Frame = +1
Query: 253 AYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE 414
A+A+GR+ G+V+DSG + VP+++GY L AI+R LAG +T ++ E
Sbjct: 75 AFANGRSNGLVIDSGATQTSAVPVHDGYVLQQAIVRSPLAGDFITAQCRQMFEE 128
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 46.0 bits (104), Expect = 3e-05
Identities = 18/38 (47%), Positives = 23/38 (60%)
Frame = +2
Query: 32 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 145
K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 299 KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 32.3 bits (70), Expect = 0.36
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +1
Query: 274 TGIVLDSGDGVSHTVPI 324
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.5 bits (68), Expect = 0.62
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +2
Query: 29 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP--EEHPVLLTEAPLNPKANRE 181
L+ P + +VT+++ E++ H F + P HPV++TE NP R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1308
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/65 (26%), Positives = 25/65 (38%)
Frame = +2
Query: 152 APLNPKANREKMTQIMFETFNTPAMYVAIQAVLSRTRPVVPPVSCWTPATVSPTPCPSTK 331
A P A + + +NTP I + + P +PP + TP+ P P PS
Sbjct: 888 ASYQPSAPSSMPAPVPLQPYNTPMP--PISSTPYQAPPTLPPTTLTTPSWSQPVPVPSMY 945
Query: 332 DTHSP 346
P
Sbjct: 946 QPQPP 950
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/84 (25%), Positives = 34/84 (40%)
Frame = +2
Query: 95 TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSRTRPVVP 274
T E VAPE + E ++P+ T + ET TP VA + ++ V
Sbjct: 4182 TMAPETTVAPET--TMAAETTVSPETTEASGTTVASETTTTPETTVAPETTMAPETTVAL 4239
Query: 275 PVSCWTPATVSPTPCPSTKDTHSP 346
+ TV+P + + T +P
Sbjct: 4240 ETTMAPETTVAPETTIAPESTEAP 4263
Score = 28.3 bits (60), Expect = 5.8
Identities = 21/84 (25%), Positives = 34/84 (40%)
Frame = +2
Query: 95 TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSRTRPVVP 274
T E VAPE + E+ L + +T + ET TP VA + + + P
Sbjct: 4915 TMVPETTVAPET--TMAPESTLAAETTMAPVTTVASETTKTPDTTVAPETTMVPEGTLAP 4972
Query: 275 PVSCWTPATVSPTPCPSTKDTHSP 346
+ TV+P + + T +P
Sbjct: 4973 ETTMAPETTVAPETTMAPETTVAP 4996
Score = 27.9 bits (59), Expect = 7.7
Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 4/84 (4%)
Frame = +2
Query: 107 ELRVAPE--EHP--VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSRTRPVVP 274
E +APE E P + E+ P+ MT + ET TP VA + + + P
Sbjct: 4372 ETTMAPESTEAPETTMAPESTEAPETTMAPMTTVASETTKTPDTPVAPETNMVAESTLAP 4431
Query: 275 PVSCWTPATVSPTPCPSTKDTHSP 346
+ TV+P + + T SP
Sbjct: 4432 ETTMTPEITVAPKTTMAPETTVSP 4455
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +1
Query: 154 SPQPQGQQREDDPDHVRNIQHARHVRRHPSR 246
SP P+ R D+P V A HV HPSR
Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295
>SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12)
Length = 439
Score = 29.9 bits (64), Expect = 1.9
Identities = 22/73 (30%), Positives = 28/73 (38%)
Frame = +2
Query: 134 PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSRTRPVVPPVSCWTPATVSPT 313
PVL A P A + TQ + P ++ V + P PPV P TV P
Sbjct: 22 PVLTEAATTQPPAPPPEPTQAPVADTDPPTNPPSVVEVTTTQAPPPPPVVTEAPTTV-PP 80
Query: 314 PCPSTKDTHSPTP 352
P + T P P
Sbjct: 81 PVVTDAPTTVPPP 93
>SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 40
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +3
Query: 600 PEALFQPSFLGMEACGIHE 656
PE +FQPS LG+E GI E
Sbjct: 3 PEIIFQPSMLGLEQAGITE 21
>SB_22850| Best HMM Match : CXC (HMM E-Value=0.22)
Length = 418
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 460 DIKEKLCYVALDFEQERPPLHPAAPSRSLTN 552
D K+C +A + ERP PAAP++ L N
Sbjct: 335 DADYKICQMACTYALERPMSEPAAPAQLLRN 365
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 29.9 bits (64), Expect = 1.9
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 38 PIEHGIVTNWDDMEKIWHHTFYNE 109
P + G + NWD ++IW +TF E
Sbjct: 292 PFQKGFLVNWDVEKQIWDYTFGKE 315
>SB_48528| Best HMM Match : Extensin_2 (HMM E-Value=1)
Length = 329
Score = 29.5 bits (63), Expect = 2.5
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +2
Query: 485 SLLTSSRKGHRCIQ--QLPREVLRTSRRSGHHYRKRKIPLPRGSLP 616
S LT R+ H + LPR ++R HY++ +PLPRG P
Sbjct: 137 SPLTKRRESHYQEEGVPLPRGGSPLTKRRESHYQEEGVPLPRGGGP 182
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 530 LPREVLRTSRRSGHHYRKRKIPLPRGSLP 616
LPR ++R HY++ +PLPRG P
Sbjct: 132 LPRGGSPLTKRRESHYQEEGVPLPRGGSP 160
>SB_51831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1065
Score = 29.1 bits (62), Expect = 3.3
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = +2
Query: 113 RVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSRTRPVVPPVSCWT 292
++A + +P + E N K + +K+ Q M +T + + ++ + +P W
Sbjct: 866 KIASKHNPEMTEEMRANLKEHLDKINQRMNDTMT---LLYNMPKIMRKFAFELPN---WA 919
Query: 293 PATVSPTPCPSTKDTHSP-TPSCV 361
P PT P+ K T +P TPS V
Sbjct: 920 PKIPLPTEPPTEKMTEAPTTPSAV 943
>SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1202
Score = 29.1 bits (62), Expect = 3.3
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +2
Query: 215 TPAMYVAIQAVLSRT-RPVVPPVSCWTPATVSPTP-CPSTKDTHSPTPS 355
TPA +RT P+ PP C + V PTP S+K + SP+PS
Sbjct: 315 TPAFTSPPNTPTTRTFSPISPPAGC-AASPVPPTPPAISSKRSFSPSPS 362
>SB_11339| Best HMM Match : TGF_beta (HMM E-Value=5.60519e-45)
Length = 481
Score = 29.1 bits (62), Expect = 3.3
Identities = 11/44 (25%), Positives = 22/44 (50%)
Frame = +2
Query: 203 ETFNTPAMYVAIQAVLSRTRPVVPPVSCWTPATVSPTPCPSTKD 334
+ + P + +Q +++ P + P +C TP +SP T+D
Sbjct: 288 DNYLRPTNHATVQTIVNSLDPSIAPKACCTPNELSPISILYTED 331
>SB_6983| Best HMM Match : rve (HMM E-Value=0.011)
Length = 251
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 248 LSRTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCV 361
+ T VVPP+ P V P+P + + SPTPSC+
Sbjct: 204 IPETPAVVPPI----PTLVVPSPL-TQPEVESPTPSCI 236
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = +2
Query: 248 LSRTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 355
+ TRP VP +T PTP P T P P+
Sbjct: 929 IQTTRPTVPTTPTTQASTTRPTPPPPTSALPPPIPA 964
>SB_25899| Best HMM Match : Ribonuc_2-5A (HMM E-Value=0)
Length = 603
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +2
Query: 536 REVLRTSRRSGHHYRKRKIPLPR--GSLPTLVLGYGSLRHPR 655
R++LR R HHYR+ + R G++P + Y + R PR
Sbjct: 521 RDLLRALRNKKHHYRELPDEVKRSLGTIPDEYVRYFTSRFPR 562
>SB_22949| Best HMM Match : rve (HMM E-Value=1.2e-19)
Length = 158
Score = 28.7 bits (61), Expect = 4.4
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 568 SSLSETKDSVAQRLSSNPRSWVWK 639
S+ SETK SV +R + + W+W+
Sbjct: 96 STKSETKASVVERFNRTSKEWMWR 119
>SB_8858| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 886
Score = 28.7 bits (61), Expect = 4.4
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +2
Query: 101 YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSRTRPV 268
Y +L V +PV T+ + + N + TQ+M T P Y + V +R PV
Sbjct: 116 YTQLMVFTRYNPVRYTQLMVFTRYNHVRYTQLMVFTRYNPVRYAQLM-VFTRYNPV 170
Score = 27.9 bits (59), Expect = 7.7
Identities = 22/88 (25%), Positives = 34/88 (38%)
Frame = +2
Query: 101 YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSRTRPVVPPV 280
Y +L V +PV + + + N + TQ+M T P Y + V +R P V
Sbjct: 545 YTQLMVFTRYNPVRYAQLMVFTRHNPVRYTQLMVFTRYNPVRYAQLM-VFTRHNP-VRYA 602
Query: 281 SCWTPATVSPTPCPSTKDTHSPTPSCVW 364
+ A + T TP CV+
Sbjct: 603 QLFVIARLLQTAVRIAASNEESTPPCVY 630
>SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088)
Length = 665
Score = 28.7 bits (61), Expect = 4.4
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Frame = +2
Query: 146 TEAP---LNPKANREKMTQIMFETFNTPAMYVAIQAVLSRTRPVVPPVSCWTPATVSPTP 316
T+AP L PK T + ET + PA+ +A + + V P + TV+P
Sbjct: 515 TDAPATTLAPKTTIAPETTVAQETTDAPAITMAPETSAAPETTVAPETNAAPETTVAPEI 574
Query: 317 CPSTKDTHSP 346
+T+ T +P
Sbjct: 575 TAATEITAAP 584
>SB_51860| Best HMM Match : ShTK (HMM E-Value=1.5e-09)
Length = 197
Score = 28.3 bits (60), Expect = 5.8
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = +2
Query: 248 LSRTRPVVPPVSCWTPA---TVSPTPCPSTKDTHSPTPSCV 361
LS+++P+VPP P T+ PTP T P P+ V
Sbjct: 105 LSKSKPLVPPTEISGPGPKETLPPTPATLPPTTVPPAPAPV 145
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 28.3 bits (60), Expect = 5.8
Identities = 20/74 (27%), Positives = 26/74 (35%)
Frame = +2
Query: 134 PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSRTRPVVPPVSCWTPATVSPT 313
P T P P T +T TP + P P + TP T +PT
Sbjct: 29 PTPTTHTPTKPSPTTPTSTAPT-QTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPTPT 87
Query: 314 PCPSTKDTHSPTPS 355
TK T + TP+
Sbjct: 88 TSTLTKPTPATTPT 101
Score = 27.9 bits (59), Expect = 7.7
Identities = 17/68 (25%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
Frame = +2
Query: 155 PLNPKANREKMTQIMFETFNTPAMYVAIQAVLSRTRPVVPPVSCWTPATVSP-TPCPSTK 331
P P +T+ +T TP ++ P P + T T +P TP P+
Sbjct: 5 PTAPTLTTPTLTKATPQTTPTPTKPTPTTHTPTKPSPTTPTSTAPTQTTPTPTTPSPTAP 64
Query: 332 DTHSPTPS 355
+PTP+
Sbjct: 65 TQTTPTPA 72
>SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38)
Length = 839
Score = 28.3 bits (60), Expect = 5.8
Identities = 22/84 (26%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Frame = +2
Query: 95 TFYNELRVAPE----EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSRTR 262
T +E VAP+ L E + P+ + + ET P VA + +
Sbjct: 487 TVASETTVAPKTTAASEATLAPETTVAPETTAAPESTLALETTAAPVTTVAPETTAAPDT 546
Query: 263 PVVPPVSCWTPATVSP--TPCPST 328
P+VP + +TV+P T P T
Sbjct: 547 PIVPETTVALESTVAPEITVVPET 570
>SB_30023| Best HMM Match : DUF1250 (HMM E-Value=6.9)
Length = 244
Score = 28.3 bits (60), Expect = 5.8
Identities = 22/88 (25%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Frame = +1
Query: 391 YLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFE--QERPPLHPAAPSRSLTNFPTV 564
Y + L++ G + T E ++R I Y + E + +PP P P+R L N+
Sbjct: 152 YNNRRLSDPGLFYPTLLENIVIRGILPP-DYPITERETYKAKPPNPPEIPARPLPNWIVF 210
Query: 565 RSSLSETKDSVAQRL---SSNPRSWVWK 639
SL++ D+ R+ S +P+ ++++
Sbjct: 211 DCSLTQWPDNTDTRMFPSSRHPKPFIFR 238
>SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)
Length = 1439
Score = 28.3 bits (60), Expect = 5.8
Identities = 26/92 (28%), Positives = 30/92 (32%), Gaps = 4/92 (4%)
Frame = +2
Query: 92 HTFYNELRVAP--EEHPVLLTEAPLNPKAN--REKMTQIMFETFNTPAMYVAIQAVLSRT 259
HT N AP HP L P+A M + ET P M V
Sbjct: 276 HTISNPAMAAPWVTPHPATLPVTLFTPQAAPVTPPMGAQLPET-EQPQMVAPSSTVTPPV 334
Query: 260 RPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 355
PP S P PTP + +P PS
Sbjct: 335 TEPAPPSSVVAPPPAVPTPATAPPPVVAPPPS 366
>SB_10665| Best HMM Match : PT (HMM E-Value=6.2)
Length = 215
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +3
Query: 309 PHRAHLRRIRTPPR-HPASGLSRSRPHRLPHEDPH 410
PHR H+ RTP R H + PH P +PH
Sbjct: 161 PHRPHMDPTRTPHRPHMDPTRTSHGPHTDPTRNPH 195
>SB_10324| Best HMM Match : IFP_35_N (HMM E-Value=0.1)
Length = 798
Score = 28.3 bits (60), Expect = 5.8
Identities = 23/88 (26%), Positives = 33/88 (37%)
Frame = +2
Query: 110 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSRTRPVVPPVSCW 289
L+ APE P+ EAP PK + ++ Q + TP +Q +L +T V
Sbjct: 330 LKKAPEHKPLDEVEAPQFPKLHHVELPQTEKKVDETPRF---VQPLLKKTTVNVKGPDQK 386
Query: 290 TPATVSPTPCPSTKDTHSPTPSCVWT*P 373
A P P +P T P
Sbjct: 387 DKAEPEPLHLPKLHHVETPNKDTTQTEP 414
>SB_6481| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 610
Score = 28.3 bits (60), Expect = 5.8
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 239 QAVLSRTRPVVPPVSCWTPATVSPTPC 319
Q RT+P VP T A+++P+PC
Sbjct: 151 QVATIRTKPAVPNTCIKTEASLTPSPC 177
>SB_7076| Best HMM Match : IncA (HMM E-Value=0.74)
Length = 282
Score = 28.3 bits (60), Expect = 5.8
Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 6/70 (8%)
Frame = +1
Query: 118 RPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQHARHVRRHPSRALAY------ASGRTTG 279
R R P PA+ ++R P I H R VR+ RA A ASG G
Sbjct: 82 RGRRCPPPANAYRSGKHRRRRAKFPTPDNEITHYRQVRKKYKRAFAVTHAVSVASGVAAG 141
Query: 280 IVLDSGDGVS 309
++ +G GVS
Sbjct: 142 VLSSAGLGVS 151
>SB_24841| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 579
Score = 27.9 bits (59), Expect = 7.7
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +2
Query: 455 FVTSRRSCATSLLTSSRKGHRCIQQLPREVLRTSRRSGHHYRKRK-IPLPR 604
FV S +++ R G + + P ++ S + HH +KRK I LPR
Sbjct: 69 FVGSLVQLGFHVISPCRSGSQITRSSPVQLKNISLQQAHHQQKRKMIQLPR 119
>SB_21667| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 812
Score = 27.9 bits (59), Expect = 7.7
Identities = 20/59 (33%), Positives = 26/59 (44%)
Frame = +1
Query: 172 QQREDDPDHVRNIQHARHVRRHPSRALAYASGRTTGIVLDSGDGVSHTVPIYEGYALPH 348
Q+R D V N+ H R + +A SG+T+ S D V PI G LPH
Sbjct: 210 QERRSTHDVVPNLGHGVASRHAQASPIAMTSGKTS----QSTDAVCRRPPIERG-TLPH 263
>SB_41600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 416
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/49 (28%), Positives = 21/49 (42%)
Frame = +2
Query: 209 FNTPAMYVAIQAVLSRTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 355
F P A+ + +R +PP+ PA P P+T SP P+
Sbjct: 321 FFGPKALSAVTVIENRISAPLPPIPRTRPAMTPPPISPTTGPPKSPAPT 369
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 27.9 bits (59), Expect = 7.7
Identities = 26/94 (27%), Positives = 38/94 (40%), Gaps = 8/94 (8%)
Frame = +2
Query: 107 ELRVAPEEHPVL-LTEAP---LNPKANREKMTQIMFETFNTPAMYVAIQAVLSRTRPVVP 274
E APE V T AP + P+ +T + ET PA A++ + +VP
Sbjct: 1323 ETSAAPETTMVPETTSAPSTTMAPETTAAPVTTMAPETTAVPATIAALETTATLETTMVP 1382
Query: 275 PVSCWTPATVSP--TPCPSTKDTHSPT--PSCVW 364
+ + TV+P T P+T T P W
Sbjct: 1383 ETTASSETTVAPETTDAPATTLAPETTAAPETTW 1416
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,712,033
Number of Sequences: 59808
Number of extensions: 522383
Number of successful extensions: 2496
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 2050
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2467
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1681430875
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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