Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30871
(657 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 182 2e-46
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 182 2e-46
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 182 2e-46
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 180 8e-46
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 180 1e-45
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 180 1e-45
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 180 1e-45
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 179 1e-45
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 179 1e-45
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 162 2e-40
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 155 2e-38
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 154 4e-38
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 108 4e-24
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 93 1e-19
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 80 1e-15
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 67 1e-11
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 63 2e-10
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 62 3e-10
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 50 2e-06
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 50 2e-06
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 49 3e-06
At4g09940.1 68417.m01627 avirulence-responsive family protein / ... 33 0.17
At3g19430.1 68416.m02464 late embryogenesis abundant protein-rel... 32 0.29
At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit (... 31 0.89
At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein c... 30 1.6
At4g27850.1 68417.m03999 proline-rich family protein contains pr... 29 2.1
At3g28790.1 68416.m03593 expressed protein 29 2.1
At2g42840.2 68415.m05305 protodermal factor 1 (PDF1) identical t... 29 2.1
At2g42840.1 68415.m05304 protodermal factor 1 (PDF1) identical t... 29 2.1
At1g51090.1 68414.m05744 heavy-metal-associated domain-containin... 29 2.1
At1g19950.1 68414.m02500 abscisic acid-responsive HVA22 family p... 29 2.7
At4g25620.1 68417.m03690 hydroxyproline-rich glycoprotein family... 29 3.6
At4g24175.1 68417.m03469 expressed protein 29 3.6
At4g19110.1 68417.m02819 protein kinase, putative contains prote... 29 3.6
At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid t... 29 3.6
At2g22470.1 68415.m02664 arabinogalactan-protein (AGP2) identica... 29 3.6
At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identica... 29 3.6
At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identica... 29 3.6
At1g70080.1 68414.m08063 terpene synthase/cyclase family protein... 29 3.6
At1g16690.2 68414.m01999 transcription factor-related similar to... 29 3.6
At1g16690.1 68414.m01998 transcription factor-related similar to... 29 3.6
At4g13350.2 68417.m02088 human Rev interacting-like protein-rela... 28 4.8
At4g13350.1 68417.m02087 human Rev interacting-like protein-rela... 28 4.8
At1g68270.1 68414.m07798 AMP-dependent synthetase and ligase fam... 28 4.8
At1g02405.1 68414.m00187 proline-rich family protein contains pr... 28 4.8
At5g18270.2 68418.m02148 no apical meristem (NAM) family protein... 28 6.3
At5g18270.1 68418.m02147 no apical meristem (NAM) family protein... 28 6.3
At1g54560.1 68414.m06222 myosin, putative similar to myosin GI:4... 28 6.3
At1g31850.3 68414.m03915 dehydration-responsive protein, putativ... 28 6.3
At1g31850.2 68414.m03914 dehydration-responsive protein, putativ... 28 6.3
At1g31850.1 68414.m03913 dehydration-responsive protein, putativ... 28 6.3
At1g08730.1 68414.m00969 myosin heavy chain (PCR43) identical to... 28 6.3
At5g11080.1 68418.m01294 ubiquitin family protein contains INTER... 27 8.3
At4g22790.1 68417.m03289 MATE efflux family protein contains Pfa... 27 8.3
At2g39480.1 68415.m04845 ABC transporter family protein related ... 27 8.3
At1g55780.1 68414.m06386 heavy-metal-associated domain-containin... 27 8.3
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 182 bits (443), Expect = 2e-46
Identities = 83/84 (98%), Positives = 84/84 (100%)
Frame = +2
Query: 2 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 181
AQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE
Sbjct: 60 AQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 119
Query: 182 KMTQIMFETFNTPAMYVAIQAVLS 253
KMTQIMFETFNTPAMYVAIQAVLS
Sbjct: 120 KMTQIMFETFNTPAMYVAIQAVLS 143
Score = 170 bits (413), Expect = 8e-43
Identities = 79/84 (94%), Positives = 83/84 (98%)
Frame = +1
Query: 256 YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 435
YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT
Sbjct: 145 YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 204
Query: 436 TAEREIVRDIKEKLCYVALDFEQE 507
+AEREIVRD+KEKL Y+ALD+EQE
Sbjct: 205 SAEREIVRDVKEKLAYIALDYEQE 228
Score = 88.6 bits (210), Expect = 3e-18
Identities = 40/48 (83%), Positives = 43/48 (89%)
Frame = +3
Query: 513 TAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHE 656
TA +SSS+EKSYELPDGQVITIG ERFRCPE LFQPS +GMEA GIHE
Sbjct: 231 TANTSSSVEKSYELPDGQVITIGGERFRCPEVLFQPSLVGMEAAGIHE 278
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 182 bits (442), Expect = 2e-46
Identities = 83/84 (98%), Positives = 83/84 (98%)
Frame = +2
Query: 2 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 181
AQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE
Sbjct: 60 AQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 119
Query: 182 KMTQIMFETFNTPAMYVAIQAVLS 253
KMTQIMFETFNTPAMYVAIQAVLS
Sbjct: 120 KMTQIMFETFNTPAMYVAIQAVLS 143
Score = 169 bits (412), Expect = 1e-42
Identities = 80/84 (95%), Positives = 83/84 (98%)
Frame = +1
Query: 256 YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 435
YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD+LMKILTERGYSFTT
Sbjct: 145 YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYSFTT 204
Query: 436 TAEREIVRDIKEKLCYVALDFEQE 507
TAEREIVRD+KEKL Y+ALDFEQE
Sbjct: 205 TAEREIVRDMKEKLSYIALDFEQE 228
Score = 82.2 bits (194), Expect = 3e-16
Identities = 37/48 (77%), Positives = 42/48 (87%)
Frame = +3
Query: 513 TAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHE 656
T+ +SSS+EKS+ELPDGQVITIG ERFRCPE LFQPS +GME GIHE
Sbjct: 231 TSKTSSSVEKSFELPDGQVITIGAERFRCPEVLFQPSMIGMENPGIHE 278
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 182 bits (442), Expect = 2e-46
Identities = 83/84 (98%), Positives = 83/84 (98%)
Frame = +2
Query: 2 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 181
AQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE
Sbjct: 60 AQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 119
Query: 182 KMTQIMFETFNTPAMYVAIQAVLS 253
KMTQIMFETFNTPAMYVAIQAVLS
Sbjct: 120 KMTQIMFETFNTPAMYVAIQAVLS 143
Score = 168 bits (409), Expect = 2e-42
Identities = 79/84 (94%), Positives = 83/84 (98%)
Frame = +1
Query: 256 YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 435
YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD+LMKILTERGYSFTT
Sbjct: 145 YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYSFTT 204
Query: 436 TAEREIVRDIKEKLCYVALDFEQE 507
TAEREIVRD+KEKL Y+ALD+EQE
Sbjct: 205 TAEREIVRDMKEKLSYIALDYEQE 228
Score = 82.2 bits (194), Expect = 3e-16
Identities = 37/48 (77%), Positives = 42/48 (87%)
Frame = +3
Query: 513 TAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHE 656
T+ +SSS+EKS+ELPDGQVITIG ERFRCPE LFQPS +GME GIHE
Sbjct: 231 TSKTSSSVEKSFELPDGQVITIGAERFRCPEVLFQPSMIGMENPGIHE 278
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 180 bits (438), Expect = 8e-46
Identities = 82/84 (97%), Positives = 83/84 (98%)
Frame = +2
Query: 2 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 181
AQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE
Sbjct: 60 AQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 119
Query: 182 KMTQIMFETFNTPAMYVAIQAVLS 253
KMTQIMFETFN PAMYVAIQAVLS
Sbjct: 120 KMTQIMFETFNVPAMYVAIQAVLS 143
Score = 167 bits (405), Expect = 7e-42
Identities = 80/84 (95%), Positives = 81/84 (96%)
Frame = +1
Query: 256 YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 435
YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGY FTT
Sbjct: 145 YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTERGYMFTT 204
Query: 436 TAEREIVRDIKEKLCYVALDFEQE 507
TAEREIVRDIKEKL YVALD+EQE
Sbjct: 205 TAEREIVRDIKEKLAYVALDYEQE 228
Score = 87.4 bits (207), Expect = 7e-18
Identities = 40/48 (83%), Positives = 43/48 (89%)
Frame = +3
Query: 513 TAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHE 656
TA SSSS+EK+YELPDGQVITIG ERFRCPE LFQPS +GMEA GIHE
Sbjct: 231 TAKSSSSVEKNYELPDGQVITIGAERFRCPEVLFQPSLIGMEAPGIHE 278
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 180 bits (437), Expect = 1e-45
Identities = 80/84 (95%), Positives = 84/84 (100%)
Frame = +2
Query: 2 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 181
AQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANRE
Sbjct: 60 AQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANRE 119
Query: 182 KMTQIMFETFNTPAMYVAIQAVLS 253
KMTQIMFETFN+PAMYVAIQAVLS
Sbjct: 120 KMTQIMFETFNSPAMYVAIQAVLS 143
Score = 164 bits (399), Expect = 4e-41
Identities = 77/84 (91%), Positives = 82/84 (97%)
Frame = +1
Query: 256 YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 435
YASGRTTGIVLDSGDGVSHTVPIYEG++LPHAILRLDLAGRDLTDYLMKILTERGY FTT
Sbjct: 145 YASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILTERGYMFTT 204
Query: 436 TAEREIVRDIKEKLCYVALDFEQE 507
TAEREIVRDIKEKL +VA+D+EQE
Sbjct: 205 TAEREIVRDIKEKLSFVAVDYEQE 228
Score = 88.6 bits (210), Expect = 3e-18
Identities = 39/48 (81%), Positives = 44/48 (91%)
Frame = +3
Query: 513 TAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHE 656
T+ +SSS+EK+YELPDGQVITIG ERFRCPE LFQPSF+GMEA GIHE
Sbjct: 231 TSKTSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSFVGMEAAGIHE 278
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 180 bits (437), Expect = 1e-45
Identities = 80/84 (95%), Positives = 84/84 (100%)
Frame = +2
Query: 2 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 181
AQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANRE
Sbjct: 60 AQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANRE 119
Query: 182 KMTQIMFETFNTPAMYVAIQAVLS 253
KMTQIMFETFN+PAMYVAIQAVLS
Sbjct: 120 KMTQIMFETFNSPAMYVAIQAVLS 143
Score = 164 bits (399), Expect = 4e-41
Identities = 77/84 (91%), Positives = 82/84 (97%)
Frame = +1
Query: 256 YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 435
YASGRTTGIVLDSGDGVSHTVPIYEG++LPHAILRLDLAGRDLTDYLMKILTERGY FTT
Sbjct: 145 YASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILTERGYMFTT 204
Query: 436 TAEREIVRDIKEKLCYVALDFEQE 507
TAEREIVRDIKEKL +VA+D+EQE
Sbjct: 205 TAEREIVRDIKEKLSFVAVDYEQE 228
Score = 88.6 bits (210), Expect = 3e-18
Identities = 39/48 (81%), Positives = 44/48 (91%)
Frame = +3
Query: 513 TAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHE 656
T+ +SSS+EK+YELPDGQVITIG ERFRCPE LFQPSF+GMEA GIHE
Sbjct: 231 TSKTSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSFVGMEAAGIHE 278
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 180 bits (437), Expect = 1e-45
Identities = 80/84 (95%), Positives = 84/84 (100%)
Frame = +2
Query: 2 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 181
AQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANRE
Sbjct: 60 AQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANRE 119
Query: 182 KMTQIMFETFNTPAMYVAIQAVLS 253
KMTQIMFETFN+PAMYVAIQAVLS
Sbjct: 120 KMTQIMFETFNSPAMYVAIQAVLS 143
Score = 164 bits (399), Expect = 4e-41
Identities = 77/84 (91%), Positives = 82/84 (97%)
Frame = +1
Query: 256 YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 435
YASGRTTGIVLDSGDGVSHTVPIYEG++LPHAILRLDLAGRDLTDYLMKILTERGY FTT
Sbjct: 145 YASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILTERGYMFTT 204
Query: 436 TAEREIVRDIKEKLCYVALDFEQE 507
TAEREIVRDIKEKL +VA+D+EQE
Sbjct: 205 TAEREIVRDIKEKLSFVAVDYEQE 228
Score = 88.6 bits (210), Expect = 3e-18
Identities = 39/48 (81%), Positives = 44/48 (91%)
Frame = +3
Query: 513 TAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHE 656
T+ +SSS+EK+YELPDGQVITIG ERFRCPE LFQPSF+GMEA GIHE
Sbjct: 231 TSKTSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSFVGMEAAGIHE 278
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 179 bits (436), Expect = 1e-45
Identities = 81/84 (96%), Positives = 82/84 (97%)
Frame = +2
Query: 2 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 181
AQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANRE
Sbjct: 60 AQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANRE 119
Query: 182 KMTQIMFETFNTPAMYVAIQAVLS 253
KMTQIMFETFN PAMYVAIQAVLS
Sbjct: 120 KMTQIMFETFNAPAMYVAIQAVLS 143
Score = 172 bits (418), Expect = 2e-43
Identities = 81/84 (96%), Positives = 83/84 (98%)
Frame = +1
Query: 256 YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 435
YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSFTT
Sbjct: 145 YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTT 204
Query: 436 TAEREIVRDIKEKLCYVALDFEQE 507
TAEREIVRDIKEKLCY+ALD+EQE
Sbjct: 205 TAEREIVRDIKEKLCYIALDYEQE 228
Score = 85.0 bits (201), Expect = 4e-17
Identities = 37/48 (77%), Positives = 43/48 (89%)
Frame = +3
Query: 513 TAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHE 656
TA +SSS+EK+YELPDGQVITIG+ERFRCPE L+QPS +GME GIHE
Sbjct: 231 TAKTSSSVEKNYELPDGQVITIGSERFRCPEVLYQPSMIGMENAGIHE 278
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 179 bits (436), Expect = 1e-45
Identities = 81/84 (96%), Positives = 82/84 (97%)
Frame = +2
Query: 2 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 181
AQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANRE
Sbjct: 60 AQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANRE 119
Query: 182 KMTQIMFETFNTPAMYVAIQAVLS 253
KMTQIMFETFN PAMYVAIQAVLS
Sbjct: 120 KMTQIMFETFNAPAMYVAIQAVLS 143
Score = 172 bits (418), Expect = 2e-43
Identities = 81/84 (96%), Positives = 83/84 (98%)
Frame = +1
Query: 256 YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 435
YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSFTT
Sbjct: 145 YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTT 204
Query: 436 TAEREIVRDIKEKLCYVALDFEQE 507
TAEREIVRDIKEKLCY+ALD+EQE
Sbjct: 205 TAEREIVRDIKEKLCYIALDYEQE 228
Score = 85.0 bits (201), Expect = 4e-17
Identities = 37/48 (77%), Positives = 43/48 (89%)
Frame = +3
Query: 513 TAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHE 656
TA +SSS+EK+YELPDGQVITIG+ERFRCPE L+QPS +GME GIHE
Sbjct: 231 TAKTSSSVEKNYELPDGQVITIGSERFRCPEVLYQPSMIGMENAGIHE 278
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 162 bits (393), Expect = 2e-40
Identities = 73/84 (86%), Positives = 82/84 (97%)
Frame = +1
Query: 256 YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 435
Y+SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT+YL KI+ ERGY++TT
Sbjct: 146 YSSGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTEYLTKIMMERGYTYTT 205
Query: 436 TAEREIVRDIKEKLCYVALDFEQE 507
+AEREIVRDIKEKLCY+A+D+EQE
Sbjct: 206 SAEREIVRDIKEKLCYIAVDYEQE 229
Score = 161 bits (392), Expect = 3e-40
Identities = 69/84 (82%), Positives = 79/84 (94%)
Frame = +2
Query: 2 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 181
AQ++RGIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAPLNPK NRE
Sbjct: 61 AQARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNRE 120
Query: 182 KMTQIMFETFNTPAMYVAIQAVLS 253
KMTQIMFE+F P+MY+ IQAVLS
Sbjct: 121 KMTQIMFESFAFPSMYIGIQAVLS 144
Score = 77.4 bits (182), Expect = 8e-15
Identities = 33/47 (70%), Positives = 40/47 (85%)
Frame = +3
Query: 516 AASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHE 656
A +SS+++++YELPDGQVITIG ERFRCPE LFQ S +GME GIHE
Sbjct: 233 ATTSSAIDRTYELPDGQVITIGAERFRCPEVLFQTSLIGMETSGIHE 279
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 155 bits (377), Expect = 2e-38
Identities = 69/84 (82%), Positives = 80/84 (95%)
Frame = +1
Query: 256 YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 435
Y+SGRTTG+VLD G+ VSHTVP+YEGYALPH ILRLDL GRDLTDYL++I+TERGY++TT
Sbjct: 134 YSSGRTTGVVLDLGERVSHTVPVYEGYALPHGILRLDLGGRDLTDYLIEIMTERGYTYTT 193
Query: 436 TAEREIVRDIKEKLCYVALDFEQE 507
+AEREIVRDIKEKLCYVALD+EQE
Sbjct: 194 SAEREIVRDIKEKLCYVALDYEQE 217
Score = 149 bits (361), Expect = 2e-36
Identities = 66/81 (81%), Positives = 74/81 (91%)
Frame = +2
Query: 8 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 187
+ R ILTLK P+EHGIV NWDDMEKIWH+TFYNELRV PEEHPVLLTEAP NPKANREKM
Sbjct: 51 ANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHPVLLTEAPYNPKANREKM 110
Query: 188 TQIMFETFNTPAMYVAIQAVL 250
TQIMFE+F+ PAMYV++Q+VL
Sbjct: 111 TQIMFESFDVPAMYVSMQSVL 131
Score = 63.3 bits (147), Expect = 1e-10
Identities = 27/42 (64%), Positives = 33/42 (78%)
Frame = +3
Query: 531 SLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHE 656
+++K+Y LPDGQ ITI ERF CPE LFQPS +G E+ GIHE
Sbjct: 226 TIDKTYVLPDGQEITIEAERFMCPEVLFQPSVIGKESSGIHE 267
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 154 bits (374), Expect = 4e-38
Identities = 66/84 (78%), Positives = 78/84 (92%)
Frame = +2
Query: 2 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 181
A+++ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPVLLTEAPLNPKA+RE
Sbjct: 15 AEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPLNPKADRE 74
Query: 182 KMTQIMFETFNTPAMYVAIQAVLS 253
KMTQIMFETF P+MY+ +QA LS
Sbjct: 75 KMTQIMFETFAVPSMYIGMQAALS 98
Score = 133 bits (321), Expect = 1e-31
Identities = 65/84 (77%), Positives = 74/84 (88%)
Frame = +1
Query: 256 YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 435
+ASGRTTG VLDSGDGVS+ VPIYEG ALPHAILRLDLAGR LT+YLMKI+ ERGY T
Sbjct: 100 HASGRTTGTVLDSGDGVSYIVPIYEGSALPHAILRLDLAGRHLTNYLMKIMMERGY---T 156
Query: 436 TAEREIVRDIKEKLCYVALDFEQE 507
+AERE+VRDIKE+ Y+ALD+EQE
Sbjct: 157 SAEREVVRDIKEQFGYIALDYEQE 180
Score = 80.2 bits (189), Expect = 1e-15
Identities = 34/47 (72%), Positives = 40/47 (85%)
Frame = +3
Query: 516 AASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHE 656
A SS+++++YELPDGQVITIG ERFRCPE LFQPS +GME GIHE
Sbjct: 184 ATKSSAIDRTYELPDGQVITIGAERFRCPEVLFQPSLIGMETSGIHE 230
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 108 bits (259), Expect = 4e-24
Identities = 44/84 (52%), Positives = 65/84 (77%)
Frame = +1
Query: 256 YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 435
YA G TG+V+DSGDGV+H VP+ +GY+ PH R+++AGR +T YL+ +L+ RGY+
Sbjct: 144 YAQGLLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITAYLVDLLSRRGYAMNK 203
Query: 436 TAEREIVRDIKEKLCYVALDFEQE 507
TA+ E VR+IKEKLCY++ D+++E
Sbjct: 204 TADFETVREIKEKLCYISYDYKRE 227
Score = 103 bits (246), Expect = 1e-22
Identities = 41/77 (53%), Positives = 56/77 (72%)
Frame = +2
Query: 23 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 202
L + YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ PLNP NREKM + MF
Sbjct: 66 LDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREKMIETMF 125
Query: 203 ETFNTPAMYVAIQAVLS 253
E +N +++ IQAVL+
Sbjct: 126 EKYNFAGVFIQIQAVLT 142
Score = 50.0 bits (114), Expect = 1e-06
Identities = 21/39 (53%), Positives = 28/39 (71%)
Frame = +3
Query: 534 LEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGI 650
L K+Y LPDG+VI +G ERF+ PEALF P + +E G+
Sbjct: 237 LVKNYTLPDGRVIKVGTERFQAPEALFTPELIDVEGDGM 275
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 93.1 bits (221), Expect = 1e-19
Identities = 39/75 (52%), Positives = 52/75 (69%)
Frame = +2
Query: 29 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 208
L YPIEHG V +WD ME+ W +N LR PE+H LLTE+PL P +RE +I+FET
Sbjct: 86 LHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTPPESREYTGEILFET 145
Query: 209 FNTPAMYVAIQAVLS 253
FN P +Y+A+ +VL+
Sbjct: 146 FNVPGLYIAVNSVLA 160
Score = 70.1 bits (164), Expect = 1e-12
Identities = 31/98 (31%), Positives = 55/98 (56%)
Frame = +1
Query: 274 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREI 453
TG+V+D GDG +H VP+ EGY + I + +AG+D+T ++ +++ ERG + ++
Sbjct: 173 TGVVVDVGDGATHVVPVAEGYVIGSCIKSIPIAGKDVTLFIQQLMRERGENIPPEDSFDV 232
Query: 454 VRDIKEKLCYVALDFEQERPPLHPAAPSRSLTNFPTVR 567
R +KE CY D +E H P++ + + V+
Sbjct: 233 ARKVKEMYCYTCSDIVKEFNK-HDKEPAKYIKQWKGVK 269
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 80.2 bits (189), Expect = 1e-15
Identities = 34/81 (41%), Positives = 53/81 (65%)
Frame = +2
Query: 11 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 190
+R + + PI+ GIV++WD ++ IW H F + L + P EHP+LL E PLN + REK
Sbjct: 85 RRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLNTQQQREKAA 144
Query: 191 QIMFETFNTPAMYVAIQAVLS 253
++MFE + PA+++A VL+
Sbjct: 145 ELMFEKYKVPALFMAKNPVLT 165
Score = 50.4 bits (115), Expect = 1e-06
Identities = 22/56 (39%), Positives = 35/56 (62%)
Frame = +1
Query: 253 AYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 420
++A+GR T +V+D G G + P+++GY L A++ L G LTD L+K L +G
Sbjct: 166 SFATGRATSLVVDCGGGSTTISPVHDGYVLQKAVVSSPLGGEFLTDCLLKSLESKG 221
Score = 42.7 bits (96), Expect = 2e-04
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = +3
Query: 543 SYELPDGQVITIGNERFRCPEALFQPSFL 629
SYELPDGQ + IG +RF+ P+ +F PS +
Sbjct: 290 SYELPDGQTLEIGADRFKVPDVMFNPSIV 318
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 66.9 bits (156), Expect = 1e-11
Identities = 36/100 (36%), Positives = 54/100 (54%)
Frame = +1
Query: 196 HVRNIQHARHVRRHPSRALAYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 375
H +++ H R P L S +V+D G +H VP+ + L HAI R+DL G
Sbjct: 130 HPQSLVHLYEASRQPDSIL---SKTQCSLVVDCGFSFTHAVPVLHNFTLNHAIKRIDLGG 186
Query: 376 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 495
+ T+YL ++++ R S E +V D KEKLC+V+LD
Sbjct: 187 KAFTNYLKELVSYR--SINVMDETFLVDDAKEKLCFVSLD 224
Score = 54.8 bits (126), Expect = 5e-08
Identities = 24/69 (34%), Positives = 41/69 (59%)
Frame = +2
Query: 29 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 208
++ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFED 120
Query: 209 FNTPAMYVA 235
F ++Y+A
Sbjct: 121 FGFSSLYIA 129
Score = 35.9 bits (79), Expect = 0.024
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = +3
Query: 570 ITIGNERFRCPEALFQPSFLGMEACGIHE 656
I + NERF PE LFQP+ LGM G+ E
Sbjct: 293 IDLTNERFLVPETLFQPADLGMNQAGLAE 321
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 62.9 bits (146), Expect = 2e-10
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = +2
Query: 11 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 184
+R + + P + GIVT+WD ++ +W H F N L + P EHP+LL E PLN + REK
Sbjct: 79 RRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLAEPPLNSQQQREK 136
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 62.1 bits (144), Expect = 3e-10
Identities = 31/73 (42%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Frame = +2
Query: 38 PIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFN 214
PIE G++ +WD ME + + Y L E +L T+ PKA RE++ Q+MFETFN
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116
Query: 215 TPAMYVAIQAVLS 253
Y + QAVLS
Sbjct: 117 VSGFYASEQAVLS 129
Score = 51.6 bits (118), Expect = 4e-07
Identities = 24/39 (61%), Positives = 29/39 (74%)
Frame = +3
Query: 540 KSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHE 656
+ + LPDGQVI+IG ER+ EALFQPS LG+E GI E
Sbjct: 221 EQHTLPDGQVISIGRERYSVGEALFQPSILGLEEHGIVE 259
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 49.6 bits (113), Expect = 2e-06
Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILR-LDLAGRDLTDYLMKILTERGYSFT 432
YA+ RT+GIV++ G V +PI G + + + LT +L + + E SF
Sbjct: 245 YAARRTSGIVVNIGFQVITILPILHGKVMRQVGVEVIGFGALKLTGFLKEKMQENNISFQ 304
Query: 433 TTAEREIVRDIKEKLCYVALDFEQE 507
+ VR +KEKLCYVALD++ E
Sbjct: 305 SLYT---VRTLKEKLCYVALDYKAE 326
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 49.6 bits (113), Expect = 2e-06
Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILR-LDLAGRDLTDYLMKILTERGYSFT 432
YA+ RT+GIV++ G V +PI G + + + LT +L + + E SF
Sbjct: 245 YAARRTSGIVVNIGFQVITILPILHGKVMRQVGVEVIGFGALKLTGFLKEKMQENNISFQ 304
Query: 433 TTAEREIVRDIKEKLCYVALDFEQE 507
+ VR +KEKLCYVALD++ E
Sbjct: 305 SLYT---VRTLKEKLCYVALDYKAE 326
Score = 34.7 bits (76), Expect = 0.055
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = +3
Query: 516 AASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHE 656
A S + S E+ T+ ERF+ E LFQP GM A +H+
Sbjct: 325 AELSKDTQASVEVSGEGWFTLSKERFQTGEILFQPRLAGMRAMSLHQ 371
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 48.8 bits (111), Expect = 3e-06
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +2
Query: 38 PIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 214
P + +V ++ ME I + F + +HP+L+TE NP +R KM +++FET+
Sbjct: 85 PFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFETYG 144
Query: 215 TPAMYVAIQAVLS 253
PA+ + A S
Sbjct: 145 VPAVAFGVDAAFS 157
Score = 44.8 bits (101), Expect = 5e-05
Identities = 23/77 (29%), Positives = 41/77 (53%)
Frame = +1
Query: 277 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 456
GIVL G +H++P +G + R ++ G +TDYL ++L+ + ++ E
Sbjct: 171 GIVLCPGFTTTHSIPFVDGEPIYKGSSRTNIGGYHVTDYLKQLLSLKYPFHSSRFTWEKA 230
Query: 457 RDIKEKLCYVALDFEQE 507
D+K + CY+A D+ E
Sbjct: 231 EDLKLEHCYIAPDYASE 247
Score = 40.7 bits (91), Expect = 8e-04
Identities = 16/29 (55%), Positives = 21/29 (72%)
Frame = +3
Query: 570 ITIGNERFRCPEALFQPSFLGMEACGIHE 656
I IG ERFRCPE LF P+ +G++ G+ E
Sbjct: 589 IVIGIERFRCPEILFHPNLIGIDQVGLDE 617
>At4g09940.1 68417.m01627 avirulence-responsive family protein /
avirulence induced gene (AIG1) family protein similar to
AIG1 protein SP:P54120 (Arabidopsis thaliana); contains
Pfam PF04548: AIG1 family;
Length = 394
Score = 33.1 bits (72), Expect = 0.17
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Frame = +3
Query: 360 SGLSRSRPHRLPHEDPHRARLLVHYHRRAGNRS*HQGEAVLRRS*LRA-GKATAASSSSL 536
SGL + RL H+ P R LLV R+GN G ++L R ++ G+A+ +++
Sbjct: 32 SGLEVTCDLRLEHK-PARTLLLVG---RSGNGKSATGNSILGRKAFKSKGRASGVTTACE 87
Query: 537 EKSYELPDGQVITI 578
+S LP+GQ+I +
Sbjct: 88 LQSSTLPNGQIINV 101
>At3g19430.1 68416.m02464 late embryogenesis abundant
protein-related / LEA protein-related similar to late
embryogenesis abundant protein [Picea glauca] GI:1350543
Length = 559
Score = 32.3 bits (70), Expect = 0.29
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = +2
Query: 242 AVLSRTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 355
+V S T PV PP TP+ SPTP P + +PTPS
Sbjct: 89 SVPSPTPPVSPPPPTPTPSVPSPTP-PVSPPPPTPTPS 125
Score = 32.3 bits (70), Expect = 0.29
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = +2
Query: 242 AVLSRTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 355
+V S T PV PP TP+ SPTP P + +PTPS
Sbjct: 107 SVPSPTPPVSPPPPTPTPSVPSPTP-PVSPPPPTPTPS 143
Score = 32.3 bits (70), Expect = 0.29
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = +2
Query: 242 AVLSRTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 355
+V S T PV PP TP+ SPTP P + +PTPS
Sbjct: 125 SVPSPTPPVSPPPPTPTPSVPSPTP-PVSPPPPTPTPS 161
Score = 31.1 bits (67), Expect = 0.67
Identities = 17/37 (45%), Positives = 19/37 (51%)
Frame = +2
Query: 242 AVLSRTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 352
+V S T PV PP TP+ SPTP T SP P
Sbjct: 143 SVPSPTPPVSPPPPTPTPSVPSPTPPVPTDPMPSPPP 179
>At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit
(IRX3) identical to gi:5230423
Length = 1026
Score = 30.7 bits (66), Expect = 0.89
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Frame = +1
Query: 151 GSPQPQGQQREDDPDHVR---NIQHARHVRRHPSRALAY 258
GSP+ +G + E+D D + NI+H + +H + A+ Y
Sbjct: 91 GSPRVEGDEDEEDIDDIEYEFNIEHEQDKHKHSAEAMLY 129
>At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein
contains Pfam PF01422: NF-X1 type zinc finger; similar
to transcriptional repressor NF-X1 (SP:Q12986) [Homo
sapiens]; similar to EST gb|T21002
Length = 1188
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = +2
Query: 266 VVPPVSCWTPATVSPTPCPSTKDT-HSPTPSC 358
+ PP+SC TP PCP + HS T C
Sbjct: 645 IPPPLSCGTPVPSCQLPCPIPQPCGHSDTHGC 676
>At4g27850.1 68417.m03999 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 577
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = +2
Query: 263 PVVPPVSCWTPATVSPTPCPSTKDTHSPTP 352
P PP S TP SP P P + SPTP
Sbjct: 230 PGPPPSSSPTPGPDSPLPSPGPPPSPSPTP 259
>At3g28790.1 68416.m03593 expressed protein
Length = 608
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/29 (51%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +2
Query: 272 PPVSCWTPATVSP-TPCPSTKDTHSPTPS 355
P S TP+T +P TP PST +PTPS
Sbjct: 281 PTPSTPTPSTPTPSTPTPSTPTPSTPTPS 309
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +2
Query: 305 SPTPCPSTKDTHSPTPS 355
SPTP PST +PTPS
Sbjct: 278 SPTPTPSTPTPSTPTPS 294
>At2g42840.2 68415.m05305 protodermal factor 1 (PDF1) identical to
protodermal factor 1 [Arabidopsis thaliana]
gi|4929130|gb|AAD33869
Length = 306
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 272 PPVSCWTPATVSPTPCPSTKDTHSPTP 352
PP TP+T S TP P T +H+PTP
Sbjct: 75 PPSHTPTPSTPSHTPTPHT-PSHTPTP 100
>At2g42840.1 68415.m05304 protodermal factor 1 (PDF1) identical to
protodermal factor 1 [Arabidopsis thaliana]
gi|4929130|gb|AAD33869
Length = 306
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 272 PPVSCWTPATVSPTPCPSTKDTHSPTP 352
PP TP+T S TP P T +H+PTP
Sbjct: 75 PPSHTPTPSTPSHTPTPHT-PSHTPTP 100
>At1g51090.1 68414.m05744 heavy-metal-associated domain-containing
protein contains Pfam profile PF00403:
Heavy-metal-associated domain
Length = 171
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = +2
Query: 257 TRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVW 364
T P P PA V P P P + +P P +W
Sbjct: 92 TAPAPAPAQAQAPALVRPAPVPVLVSSSAPQPMPMW 127
>At1g19950.1 68414.m02500 abscisic acid-responsive HVA22 family
protein weak similarity to SP|Q00765 Polyposis locus
protein 1 (TB2 protein) {Homo sapiens}; contains Pfam
profile PF03134: TB2/DP1, HVA22 family
Length = 315
Score = 29.1 bits (62), Expect = 2.7
Identities = 20/74 (27%), Positives = 29/74 (39%)
Frame = +2
Query: 134 PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSRTRPVVPPVSCWTPATVSPT 313
P L+T+ P++PK Q +T A Q L+ P PP P P
Sbjct: 191 PQLVTKEPISPKPLSSPRKQQQLQTETKEAKASVSQTKLTTLTPPGPP-----PPPPPPP 245
Query: 314 PCPSTKDTHSPTPS 355
P P+T + P+
Sbjct: 246 PSPTTAAKRNADPA 259
>At4g25620.1 68417.m03690 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965; Common family member At5g52430
[Arabidopsis thaliana];
Length = 449
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = +2
Query: 206 TFNTPAMYVAIQAVLSRTRPVVPPVSCWTPATVSPTPCPSTKDTHSPT 349
T N P I T+PV PPV ++ T P+ P T SP+
Sbjct: 118 TVNEPPSAFTIGPYAHETQPVTPPV--FSAFTTEPSTAPFTPPPESPS 163
>At4g24175.1 68417.m03469 expressed protein
Length = 306
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 6/40 (15%)
Frame = +2
Query: 527 QLPREVLRTSRRSGHHYRK------RKIPLPRGSLPTLVL 628
QL R + + S + HH+R +K+P P S+PTL+L
Sbjct: 3 QLIRPIRQLSPQCNHHFRNLRYLFSKKLPNPPSSIPTLLL 42
>At4g19110.1 68417.m02819 protein kinase, putative contains protein
kinase domain, Pfam:PF00069
Length = 461
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +1
Query: 508 RPPLHPAAPSRSLTNFPTVRSSLSETKDSVA 600
RPP + P+ SL RSS+SET D +A
Sbjct: 374 RPPGKKSPPAASLNKNRVTRSSVSETADKLA 404
>At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 334
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +2
Query: 257 TRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCV 361
T PVV P + P PTP P +PTP +
Sbjct: 171 TPPVVTPPTPTPPVITPPTPTPPVVTPPTPTPPVI 205
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +2
Query: 257 TRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCV 361
T PVV P + P PTP P +PTP V
Sbjct: 191 TPPVVTPPTPTPPVITPPTPTPPVITPPTPTPPVV 225
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +2
Query: 257 TRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCV 361
T PV+ P + P PTP P +PTP V
Sbjct: 201 TPPVITPPTPTPPVITPPTPTPPVVTPPTPTPPVV 235
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +2
Query: 257 TRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCV 361
T PV+ P + P PTP P +PTP +
Sbjct: 181 TPPVITPPTPTPPVVTPPTPTPPVITPPTPTPPVI 215
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +2
Query: 257 TRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 352
T PV+ P + P PTP P +PTP
Sbjct: 211 TPPVITPPTPTPPVVTPPTPTPPVVTPPTPTP 242
>At2g22470.1 68415.m02664 arabinogalactan-protein (AGP2) identical
to gi|3883122|gb|AAC77824; supported by cDNA
gi|3883121|gb|AF082299
Length = 131
Score = 28.7 bits (61), Expect = 3.6
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 269 VPPVSCWTPATVSPTPCPSTKDTHSPTPS 355
+PPV+ TP+ ++ P P + T +PT S
Sbjct: 38 LPPVTAETPSPIASPPVPVNEPTPAPTTS 66
>At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 176
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +2
Query: 272 PPVSCWTPATVSPTPCPSTK-DTHSPTPS 355
PP +P P P P+TK D+ SP+PS
Sbjct: 112 PPAPLASPPAQVPAPAPTTKPDSPSPSPS 140
>At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 191
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +2
Query: 272 PPVSCWTPATVSPTPCPSTK-DTHSPTPS 355
PP +P P P P+TK D+ SP+PS
Sbjct: 112 PPAPLASPPAQVPAPAPTTKPDSPSPSPS 140
>At1g70080.1 68414.m08063 terpene synthase/cyclase family protein
similar to (+)-delta-cadinene synthase [Gossypium
hirsutum][GI:8389329], sesquiterpene synthases
[GI:11934937][Lycopersicon hirsutum],
[GI:11934933][Lycopersicon esculentum]; contains Pfam
profile: PF01397: Terpene synthase family
Length = 611
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +2
Query: 227 YVAIQAVLSRTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVW 364
Y +++ LS +R P C AT +PT ST + +P P +W
Sbjct: 31 YPLLKSSLSFSRFQSPKKLCLVRATTNPTDDNSTTRSFTPHPPSLW 76
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.7 bits (61), Expect = 3.6
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +2
Query: 23 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 184
L++KY + H I + W + +IW L+ P PV T P N REK
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.7 bits (61), Expect = 3.6
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +2
Query: 23 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 184
L++KY + H I + W + +IW L+ P PV T P N REK
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227
>At4g13350.2 68417.m02088 human Rev interacting-like protein-related
/ hRIP protein-related similar to SP|P52594
Nucleoporin-like protein RIP (HIV-1 Rev-binding protein)
(Rev interacting protein) (Rev/Rex activation
domain-binding protein) {Homo sapiens}; contains Pfam
profile PF01412: Putative GTPase activating protein for
Arf
Length = 602
Score = 28.3 bits (60), Expect = 4.8
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Frame = +2
Query: 185 MTQIMFET-FNTPAMYVAIQAVLSRT-RPVVPPVSCWTP--ATVSPTPCPSTKDTHSPTP 352
++ I F+T F TPA VAIQA LS T +P P + A+ P + + P P
Sbjct: 282 LSLIDFDTDFETPAPSVAIQAPLSTTSQPAPQPTTSSNDNWASFDAAPSAPSLNVSQPPP 341
Query: 353 S 355
S
Sbjct: 342 S 342
>At4g13350.1 68417.m02087 human Rev interacting-like protein-related
/ hRIP protein-related similar to SP|P52594
Nucleoporin-like protein RIP (HIV-1 Rev-binding protein)
(Rev interacting protein) (Rev/Rex activation
domain-binding protein) {Homo sapiens}; contains Pfam
profile PF01412: Putative GTPase activating protein for
Arf
Length = 602
Score = 28.3 bits (60), Expect = 4.8
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Frame = +2
Query: 185 MTQIMFET-FNTPAMYVAIQAVLSRT-RPVVPPVSCWTP--ATVSPTPCPSTKDTHSPTP 352
++ I F+T F TPA VAIQA LS T +P P + A+ P + + P P
Sbjct: 282 LSLIDFDTDFETPAPSVAIQAPLSTTSQPAPQPTTSSNDNWASFDAAPSAPSLNVSQPPP 341
Query: 353 S 355
S
Sbjct: 342 S 342
>At1g68270.1 68414.m07798 AMP-dependent synthetase and ligase family
protein similar to AMP-binding protein GI:1903034 from
[Brassica napus]; contains Pfam AMP-binding domain
PF00501
Length = 535
Score = 28.3 bits (60), Expect = 4.8
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +2
Query: 497 SSRKGHRCIQQLPREVLRTSRRSGH-HYRKRKIPLP 601
SS +GH+C+ + PR L S RSG H PLP
Sbjct: 249 SSARGHQCVYE-PRNPLDMSHRSGPVHLMTGGSPLP 283
>At1g02405.1 68414.m00187 proline-rich family protein contains
proline-rich region, INTERPRO:IPR000694
Length = 134
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2
Query: 263 PVVPPVSCWTPATVSPTPCPSTKDTHSPTP 352
P PP SC TP+ P+P P K + P+P
Sbjct: 53 PSPPPPSC-TPSPPPPSPPPPKKSSCPPSP 81
>At5g18270.2 68418.m02148 no apical meristem (NAM) family protein
contains Pfam PF02365 : No apical meristem (NAM)
protein; similar to cup-shaped cotyledon CUC2
(GI:1944132) [Arabidopsis thaliana]
Length = 335
Score = 27.9 bits (59), Expect = 6.3
Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 2/102 (1%)
Frame = +2
Query: 50 GIVTNW--DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPA 223
G TNW + +++YN + A +E V NP + MT+I E F
Sbjct: 135 GEKTNWVMHEYRLEGKYSYYNLPKSARDEWVVCRVFHKNNPSTTTQPMTRIPVEDFTRMD 194
Query: 224 MYVAIQAVLSRTRPVVPPVSCWTPATVSPTPCPSTKDTHSPT 349
I +L + +PP+ P+ +S T P+ K + PT
Sbjct: 195 SLENIDHLLDFSS--LPPLI--DPSFMSQTEQPNFKPINPPT 232
>At5g18270.1 68418.m02147 no apical meristem (NAM) family protein
contains Pfam PF02365 : No apical meristem (NAM)
protein; similar to cup-shaped cotyledon CUC2
(GI:1944132) [Arabidopsis thaliana]
Length = 335
Score = 27.9 bits (59), Expect = 6.3
Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 2/102 (1%)
Frame = +2
Query: 50 GIVTNW--DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPA 223
G TNW + +++YN + A +E V NP + MT+I E F
Sbjct: 135 GEKTNWVMHEYRLEGKYSYYNLPKSARDEWVVCRVFHKNNPSTTTQPMTRIPVEDFTRMD 194
Query: 224 MYVAIQAVLSRTRPVVPPVSCWTPATVSPTPCPSTKDTHSPT 349
I +L + +PP+ P+ +S T P+ K + PT
Sbjct: 195 SLENIDHLLDFSS--LPPLI--DPSFMSQTEQPNFKPINPPT 232
>At1g54560.1 68414.m06222 myosin, putative similar to myosin
GI:433663 from [Arabidopsis thaliana]
Length = 1529
Score = 27.9 bits (59), Expect = 6.3
Identities = 18/66 (27%), Positives = 31/66 (46%)
Frame = +2
Query: 62 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 241
+W +E + + + + P LL EA + PK+ E +++TF T + I+
Sbjct: 483 DWSYIEFVDNQDVLDLIEKKPGGIVALLDEACMFPKSTHETFANKLYQTFKTHKRF--IK 540
Query: 242 AVLSRT 259
LSRT
Sbjct: 541 PKLSRT 546
>At1g31850.3 68414.m03915 dehydration-responsive protein, putative
strong similarity to early-responsive to dehydration
stress ERD3 protein [Arabidopsis thaliana] GI:15320410;
contains Pfam profile PF03141: Putative
methyltransferase
Length = 603
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/61 (24%), Positives = 23/61 (37%)
Frame = -3
Query: 376 DRLSPDAGWRGGVRILXXXXXXXXXXXRSPARYRWYDRTRTREHGLDGDVHGGRVECFEH 197
D + PD+ W +R + +W +R + GDVHGG +H
Sbjct: 372 DSIEPDSAWYTPLRPCVVAPTPKVKKSGLGSIPKWPERLHVAPERI-GDVHGGSANSLKH 430
Query: 196 D 194
D
Sbjct: 431 D 431
>At1g31850.2 68414.m03914 dehydration-responsive protein, putative
strong similarity to early-responsive to dehydration
stress ERD3 protein [Arabidopsis thaliana] GI:15320410;
contains Pfam profile PF03141: Putative
methyltransferase
Length = 603
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/61 (24%), Positives = 23/61 (37%)
Frame = -3
Query: 376 DRLSPDAGWRGGVRILXXXXXXXXXXXRSPARYRWYDRTRTREHGLDGDVHGGRVECFEH 197
D + PD+ W +R + +W +R + GDVHGG +H
Sbjct: 372 DSIEPDSAWYTPLRPCVVAPTPKVKKSGLGSIPKWPERLHVAPERI-GDVHGGSANSLKH 430
Query: 196 D 194
D
Sbjct: 431 D 431
>At1g31850.1 68414.m03913 dehydration-responsive protein, putative
strong similarity to early-responsive to dehydration
stress ERD3 protein [Arabidopsis thaliana] GI:15320410;
contains Pfam profile PF03141: Putative
methyltransferase
Length = 603
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/61 (24%), Positives = 23/61 (37%)
Frame = -3
Query: 376 DRLSPDAGWRGGVRILXXXXXXXXXXXRSPARYRWYDRTRTREHGLDGDVHGGRVECFEH 197
D + PD+ W +R + +W +R + GDVHGG +H
Sbjct: 372 DSIEPDSAWYTPLRPCVVAPTPKVKKSGLGSIPKWPERLHVAPERI-GDVHGGSANSLKH 430
Query: 196 D 194
D
Sbjct: 431 D 431
>At1g08730.1 68414.m00969 myosin heavy chain (PCR43) identical to
myosin heavy chain PCR43 (PIR:T00727) [Arabidopsis
thaliana]; similar to ESTs gb|R30087 and gb|AA394762
Length = 1538
Score = 27.9 bits (59), Expect = 6.3
Identities = 18/66 (27%), Positives = 31/66 (46%)
Frame = +2
Query: 62 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 241
+W +E + + + + P LL EA + PK+ E +++TF T + I+
Sbjct: 488 DWSYIEFVDNQDVLDLIEKKPGGIVALLDEACMFPKSTHETFANKLYQTFKTHKRF--IK 545
Query: 242 AVLSRT 259
LSRT
Sbjct: 546 PKLSRT 551
>At5g11080.1 68418.m01294 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 352
Score = 27.5 bits (58), Expect = 8.3
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +1
Query: 379 DLTDYL-MKILTERGYSFTTTAEREI-VRDIKEKLCYVALDFEQERPP 516
D TD + +KI + T + ER I VRD+K+ +CY ER P
Sbjct: 6 DFTDLIRIKIKILHSTTHTLSVERTIPVRDLKQDICYYC-GVSPERQP 52
>At4g22790.1 68417.m03289 MATE efflux family protein contains Pfam
profile PF01554: Uncharacterized membrane protein family
Length = 491
Score = 27.5 bits (58), Expect = 8.3
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +2
Query: 47 HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT-QIMFETFNTPA 223
H I+T + E I L + PE P+L PL + + +T IMF T +
Sbjct: 134 HKILTGFGQREDISFIAKKYLLYLLPEL-PILSFLCPLKAYLSSQGVTLPIMFTTAAATS 192
Query: 224 MYVAIQAVLSRTRPV 268
+++ I VLS+ R +
Sbjct: 193 LHIPINIVLSKARGI 207
>At2g39480.1 68415.m04845 ABC transporter family protein related to
multi drug resistance proteins and P-glycoproteins
Length = 1407
Score = 27.5 bits (58), Expect = 8.3
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = +1
Query: 247 ALAYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 408
+L G+T +V SG G S + + E Y P A L L GRDL Y ++ L
Sbjct: 1180 SLKVNGGQTVAVVGVSGSGKSTIISLIERYYDPVAGQVL-LDGRDLKSYNLRWL 1232
>At1g55780.1 68414.m06386 heavy-metal-associated domain-containing
protein contains Pfam profile PF00403:
Heavy-metal-associated domain
Length = 133
Score = 27.5 bits (58), Expect = 8.3
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +1
Query: 448 EIVRDIKEKLCYVALDFEQERPPLHPAAP 534
E+ R++K+K+C + Q PP P P
Sbjct: 45 ELTRELKKKVCMTTIITVQAAPPQQPPQP 73
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,717,990
Number of Sequences: 28952
Number of extensions: 354226
Number of successful extensions: 1598
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 1352
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1569
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1373722560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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