Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30866
(816 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0163 + 26400486-26400621,26401477-26401646,26402623-264027... 79 6e-15
03_02_0770 + 11038971-11039392,11040071-11040353,11040697-11040798 61 9e-10
01_06_0153 - 27044553-27044669,27044842-27044964,27045066-270451... 61 9e-10
02_05_0164 + 26405052-26405208,26405304-26405473,26406278-264063... 59 4e-09
02_02_0418 + 10000744-10000840,10000952-10001023,10001786-100018... 55 6e-08
05_04_0012 + 17145112-17145205,17145681-17145752,17145832-171459... 54 1e-07
01_03_0216 + 13870364-13870472,13871406-13871477,13871603-138716... 52 4e-07
05_01_0400 - 3159370-3159385,3159599-3159703,3159972-3160006,316... 51 1e-06
01_06_0729 - 31546464-31546574,31546653-31546694,31546795-315468... 38 0.013
12_01_0945 + 9351915-9351929,9352221-9352386,9352903-9353024,935... 36 0.029
10_08_1007 - 22210263-22210400,22210506-22210547,22210626-222107... 36 0.029
01_01_0746 + 5772340-5773083 32 0.47
02_05_0363 - 28297295-28298167 30 1.9
01_06_1525 + 37988037-37988237,37988315-37988410,37988508-379886... 29 3.3
10_08_0871 - 21181798-21181917,21182024-21182065,21182162-211821... 29 4.4
09_04_0597 - 18859601-18859818,18860914-18861083,18861250-188613... 29 4.4
08_01_0493 - 4297761-4298288 29 5.8
06_01_1074 - 8765183-8765278,8765657-8765749,8766520-8766600,876... 28 7.7
01_07_0157 - 41547505-41547861,41547949-41548078,41548180-415484... 28 7.7
>02_05_0163 +
26400486-26400621,26401477-26401646,26402623-26402713,
26402822-26402873,26403462-26403565,26403648-26403724,
26403890-26404069
Length = 269
Score = 78.6 bits (185), Expect = 6e-15
Identities = 37/97 (38%), Positives = 57/97 (58%)
Frame = +2
Query: 218 LCRRKGEIRSTRVNIGTIPGAGGTQRLPRYVGKSKAMEIVLTGNFFDAHEAEKMGLVSKV 397
+C + + IPGAGGTQRLPR VG+S+A E++ TG +A EA MGL +
Sbjct: 131 ICGENATLGLPETGLAIIPGAGGTQRLPRIVGRSRAKEMIFTGRRCNATEAVMMGLANYC 190
Query: 398 FPVEKLLEETIKLAERIGTHSPLIVKLAKQAVNQAYE 508
P + E+ ++LA I PL +++AK+A++Q +
Sbjct: 191 VPAGEAHEKALELAREIAQKGPLGIRMAKKAIDQGMQ 227
Score = 49.6 bits (113), Expect = 3e-06
Identities = 24/50 (48%), Positives = 29/50 (58%)
Frame = +3
Query: 126 DISNCGKPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPESTLAPSP 275
D+ P IA + G ALGGG ELA+ CD+ GE A G PE+ LA P
Sbjct: 100 DLKALSIPTIAVIEGAALGGGLELALSCDLRICGENATLGLPETGLAIIP 149
Score = 33.9 bits (74), Expect = 0.16
Identities = 18/79 (22%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +1
Query: 397 IPSGKTFRRNHQAG*KDRNPLPVNCEVGQTSCEPSLRAT-LKSGLQFEKSTFYGTFATED 573
+P+G+ + + + P+ + + + + ++A + S L E + TED
Sbjct: 191 VPAGEAHEKALELAREIAQKGPLGIRMAKKAIDQGMQAADMPSALAVEGECYEQLLHTED 250
Query: 574 RKEGMTAFVEKRPPNFKNE 630
R EG+ AF E+R P + +
Sbjct: 251 RLEGLAAFAERRKPVYSGK 269
>03_02_0770 + 11038971-11039392,11040071-11040353,11040697-11040798
Length = 268
Score = 61.3 bits (142), Expect = 9e-10
Identities = 27/79 (34%), Positives = 44/79 (55%)
Frame = +3
Query: 6 IAAIIITGNEKAFAAGADIKEMQNNTYSSNTKQGFLREWEDISNCGKPIIAAVNGFALGG 185
+AA+++ G +AF +G D+ + + + K + C KPI+ A+ GFA+
Sbjct: 58 VAAVVLAGRGRAFCSGVDLTAAEE-VFKGDVKDPAADPVVQMERCRKPIVGAIAGFAVTA 116
Query: 186 GCELAMLCDIIYAGEKAKF 242
G E+A+ CDI+ AG AKF
Sbjct: 117 GFEIALACDILVAGRSAKF 135
Score = 51.2 bits (117), Expect = 1e-06
Identities = 28/94 (29%), Positives = 47/94 (50%)
Frame = +2
Query: 227 RKGEIRSTRVNIGTIPGAGGTQRLPRYVGKSKAMEIVLTGNFFDAHEAEKMGLVSKVFPV 406
R + T G P G +Q+L R +G ++A E+ LT A AEK GLV+ +
Sbjct: 131 RSAKFIDTHAKFGIFPSWGLSQKLSRVIGPNRAREVSLTCMPITAEMAEKWGLVNHIVDD 190
Query: 407 EKLLEETIKLAERIGTHSPLIVKLAKQAVNQAYE 508
++L + I++ E I ++ +V L K +N +
Sbjct: 191 TQVLSKAIEVCEAIARNNRNLVVLYKSVINDGLQ 224
>01_06_0153 -
27044553-27044669,27044842-27044964,27045066-27045161,
27045323-27045370,27046360-27046458,27046554-27046592,
27047032-27047133,27047225-27047347,27047535-27047783
Length = 331
Score = 61.3 bits (142), Expect = 9e-10
Identities = 31/85 (36%), Positives = 47/85 (55%)
Frame = +2
Query: 248 TRVNIGTIPGAGGTQRLPRYVGKSKAMEIVLTGNFFDAHEAEKMGLVSKVFPVEKLLEET 427
T +G+ GT + R VG KA E+ F+ A EA++MGLV+ V P+ L ET
Sbjct: 201 TGPKVGSFDAGYGTSIMSRLVGPKKAREMWFLSRFYTADEADRMGLVNVVVPLADLERET 260
Query: 428 IKLAERIGTHSPLIVKLAKQAVNQA 502
+K +I +SP +++ K A+N A
Sbjct: 261 VKWCRKILRNSPTAIRVLKSALNAA 285
Score = 48.4 bits (110), Expect = 7e-06
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Frame = +3
Query: 3 NIAAIIITGN-EKAFAAGADIKEMQNNTYSSNTKQGFLREWE---DISNCGKPIIAAVNG 170
+I II+TG ++F +G D + Y G L + I KP+IA V G
Sbjct: 115 SIGVIILTGKGTQSFCSGGDQALRDADGYVDFDSFGRLNVLDLQVQIRRLPKPVIAMVAG 174
Query: 171 FALGGGCELAMLCDIIYAGEKAKFGQ 248
+A+GGG L M+CD+ A + A FGQ
Sbjct: 175 YAVGGGHVLHMVCDLTIAADNAIFGQ 200
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +1
Query: 547 FYGTFATEDRKEGMTAFVEKRPPNF 621
FYGT E+ KEG A++E+R P+F
Sbjct: 303 FYGT---EEAKEGKNAYMERRRPDF 324
>02_05_0164 +
26405052-26405208,26405304-26405473,26406278-26406352,
26406570-26406660,26406768-26406848,26407192-26407353,
26407425-26407501,26407670-26407846
Length = 329
Score = 59.3 bits (137), Expect = 4e-09
Identities = 36/97 (37%), Positives = 52/97 (53%), Gaps = 20/97 (20%)
Frame = +2
Query: 278 AGGTQRLPRYVGKSKAMEIVLTGNFFDAHEAEKM--------------------GLVSKV 397
+GGTQRLPR VGKS+A E++ TG FDA EA M G+V+
Sbjct: 192 SGGTQRLPRIVGKSRAKELIFTGRRFDAVEAVTMGKVGLAPSFLRGVLLHFISTGVVNYC 251
Query: 398 FPVEKLLEETIKLAERIGTHSPLIVKLAKQAVNQAYE 508
P + + ++LA+ I PL +++AK+A+NQ E
Sbjct: 252 VPAGEAYKRALELAQEINQKGPLAIRMAKKAINQGME 288
Score = 52.0 bits (119), Expect = 5e-07
Identities = 35/86 (40%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Frame = +3
Query: 36 KAFAAGADIKEM------QNNTYSSNTKQGFLREWEDISNCGKPIIAAVNGFALGGGCEL 197
K F AGAD+KE + + ++ + FL +E +S P IA V G A GGG EL
Sbjct: 100 KVFCAGADLKERRLMSPCEVREFVNSLRSTFL-SFEALSI---PTIAIVEGAAFGGGLEL 155
Query: 198 AMLCDIIYAGEKAKFGQPESTLAPSP 275
A+ CD+ GE A F PE+ LA P
Sbjct: 156 ALSCDLRICGENATFSLPETGLAIIP 181
Score = 41.9 bits (94), Expect = 6e-04
Identities = 19/73 (26%), Positives = 36/73 (49%)
Frame = +1
Query: 397 IPSGKTFRRNHQAG*KDRNPLPVNCEVGQTSCEPSLRATLKSGLQFEKSTFYGTFATEDR 576
+P+G+ ++R + + P+ + + + + L +GL E+ + T+DR
Sbjct: 252 VPAGEAYKRALELAQEINQKGPLAIRMAKKAINQGMEVDLSAGLAVEEECYEQVLHTQDR 311
Query: 577 KEGMTAFVEKRPP 615
EG+ AF EKR P
Sbjct: 312 LEGLAAFAEKRKP 324
>02_02_0418 +
10000744-10000840,10000952-10001023,10001786-10001848,
10001952-10002008,10002159-10002226,10002327-10002408,
10002517-10002572,10002934-10003236,10003638-10003724,
10004454-10004628,10004813-10004934,10005171-10005334,
10006201-10006455,10006979-10007100,10007220-10007341,
10007452-10007600,10007649-10007652
Length = 665
Score = 55.2 bits (127), Expect = 6e-08
Identities = 31/78 (39%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Frame = +2
Query: 254 VNIGTIPGAGGTQRLPRYVGKSKAMEIVLTGNFFDAHEAEKMGLVSKVFPVEKLLEETIK 433
+ +G IPG GGTQRLPR VG KA+E++L F A E ++ GLV + ++L++ +
Sbjct: 137 LTLGIIPGFGGTQRLPRLVGLPKAIEMMLQSKFITAKEGKEGGLVDALCSPDELIKMSRL 196
Query: 434 LAERIGTH-SPLIVKLAK 484
A I + P I LA+
Sbjct: 197 WALEIANYRKPWIRSLAR 214
>05_04_0012 +
17145112-17145205,17145681-17145752,17145832-17145911,
17146059-17146175,17146282-17146363,17147086-17147141,
17147258-17147560,17147658-17147744,17148118-17148292,
17148370-17148491,17149028-17149191,17149277-17149531,
17150419-17150540,17150656-17150777,17151302-17151450,
17151565-17151703,17151831-17151866
Length = 724
Score = 54.4 bits (125), Expect = 1e-07
Identities = 28/65 (43%), Positives = 36/65 (55%)
Frame = +2
Query: 254 VNIGTIPGAGGTQRLPRYVGKSKAMEIVLTGNFFDAHEAEKMGLVSKVFPVEKLLEETIK 433
+ +G IPG GGTQRLPR VG KA+E++L EA K GLV V ++L+
Sbjct: 139 LQLGIIPGLGGTQRLPRLVGLPKALEMLLMSKPLKGVEAHKFGLVDAVVSADELISTACS 198
Query: 434 LAERI 448
A I
Sbjct: 199 WALEI 203
Score = 48.0 bits (109), Expect = 9e-06
Identities = 29/98 (29%), Positives = 47/98 (47%), Gaps = 7/98 (7%)
Frame = +3
Query: 3 NIAAIIITGNEKAFAAGADIKEMQNNTYSS-------NTKQGFLREWEDISNCGKPIIAA 161
++ AI++TG + F+ G DI N ++ ++ + + KP +AA
Sbjct: 48 DVKAIVLTGAKGRFSGGFDINAFDKKPSKDCPVLSFVNKLNIYVVKFMLLPDAPKPSVAA 107
Query: 162 VNGFALGGGCELAMLCDIIYAGEKAKFGQPESTLAPSP 275
++G ALGGG EL M+C + A+ G PE L P
Sbjct: 108 IDGVALGGGLELVMVCHARVSTSSAQLGLPELQLGIIP 145
>01_03_0216 +
13870364-13870472,13871406-13871477,13871603-13871668,
13871767-13871823,13871917-13871984,13872068-13872149,
13872445-13872500,13872645-13872947,13873042-13873128,
13873199-13873373,13873481-13873602,13873689-13873852,
13873925-13874179,13874312-13874433,13874542-13874663,
13875111-13875259,13875346-13875484,13875715-13875750
Length = 727
Score = 52.4 bits (120), Expect = 4e-07
Identities = 24/55 (43%), Positives = 35/55 (63%)
Frame = +2
Query: 254 VNIGTIPGAGGTQRLPRYVGKSKAMEIVLTGNFFDAHEAEKMGLVSKVFPVEKLL 418
+ +G IPG GGTQRLPR VG +KA+E++L EA ++GLV + + L+
Sbjct: 142 LQLGVIPGFGGTQRLPRLVGLTKALEMMLLSKPIKGAEAHQLGLVDSLVSADDLV 196
Score = 48.4 bits (110), Expect = 7e-06
Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 5/96 (5%)
Frame = +3
Query: 3 NIAAIIITGNEKAFAAGADIKEMQN--NTYSSNTKQGFLRE---WEDISNCGKPIIAAVN 167
++ AI++TG F+ G DI + K G++ + + KP +AA++
Sbjct: 53 DVKAIVVTGKGGKFSGGFDISSFGSVQGGKVEQPKVGYISIDIITDTLEAATKPSVAAID 112
Query: 168 GFALGGGCELAMLCDIIYAGEKAKFGQPESTLAPSP 275
G ALGGG E+AM C + A+ G PE L P
Sbjct: 113 GLALGGGLEVAMACHARISTPTAQLGLPELQLGVIP 148
>05_01_0400 -
3159370-3159385,3159599-3159703,3159972-3160006,
3160134-3160272,3160457-3160605,3161052-3161173,
3161296-3161417,3161779-3162033,3162108-3162271,
3162311-3162489,3162593-3162767,3162916-3163002,
3163144-3163446,3163539-3163594,3163813-3163894,
3163972-3164039,3164779-3164835,3164926-3164991,
3165121-3165192,3167363-3167459
Length = 782
Score = 50.8 bits (116), Expect = 1e-06
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
Frame = +3
Query: 3 NIAAIIITGNEKAFAAGADIKE---MQNNTYSSNTKQGFLR---EWEDISNCGKPIIAAV 164
++ AI++TG F+ G DI +Q N + K ++ + GKP +AA+
Sbjct: 49 DVKAIVVTGKGGVFSGGLDINTFGAIQRNK-AEQLKVDYVSIDVMTNTLEAAGKPSVAAI 107
Query: 165 NGFALGGGCELAMLCDIIYAGEKAKFGQPESTLAPSP 275
NG ALGGG E++M+C + A+ G PE L P
Sbjct: 108 NGPALGGGLEISMVCQARISIPTAQLGLPELQLGVIP 144
Score = 50.4 bits (115), Expect = 2e-06
Identities = 24/62 (38%), Positives = 35/62 (56%)
Frame = +2
Query: 254 VNIGTIPGAGGTQRLPRYVGKSKAMEIVLTGNFFDAHEAEKMGLVSKVFPVEKLLEETIK 433
+ +G IP GGTQRLPR VG +KA+E++L A EA ++ L+ + LL +
Sbjct: 138 LQLGVIPAFGGTQRLPRLVGLTKALEMMLMSKPIKAEEAHQLALIDAIVSPNDLLNTACR 197
Query: 434 LA 439
A
Sbjct: 198 WA 199
>01_06_0729 -
31546464-31546574,31546653-31546694,31546795-31546896,
31547148-31547246,31547522-31547582,31547659-31547807,
31547963-31548048,31548249-31548333,31548642-31548725,
31548820-31548893,31549035-31549095,31549546-31549614,
31549712-31549795,31549893-31549937
Length = 383
Score = 37.5 bits (83), Expect = 0.013
Identities = 23/86 (26%), Positives = 36/86 (41%), Gaps = 3/86 (3%)
Frame = +3
Query: 15 IIITGNEKAFAAGADIKEMQNNTYSSNTKQGFLREW---EDISNCGKPIIAAVNGFALGG 185
+I G +AF+AG D+K + + R + I K +A VNG +GG
Sbjct: 63 VIFKGAGRAFSAGGDLKMFYEGKSDDSCLEVVYRMYWLCYHIHTYKKTAVALVNGLVMGG 122
Query: 186 GCELAMLCDIIYAGEKAKFGQPESTL 263
G + EK F PE+++
Sbjct: 123 GAAMVAPLKFAVVTEKTVFATPEASV 148
Score = 28.3 bits (60), Expect = 7.7
Identities = 24/73 (32%), Positives = 33/73 (45%)
Frame = +2
Query: 293 RLPRYVGKSKAMEIVLTGNFFDAHEAEKMGLVSKVFPVEKLLEETIKLAERIGTHSPLIV 472
RLP Y+G+ A LTG +A E GL + P EK LEE K + T V
Sbjct: 162 RLPGYLGEYLA----LTGARLNAKEMIAAGLATHFVPSEK-LEELEKCLLNLNTGDESAV 216
Query: 473 KLAKQAVNQAYEP 511
+ A + + +P
Sbjct: 217 RAAIEEFSTDVQP 229
>12_01_0945 +
9351915-9351929,9352221-9352386,9352903-9353024,
9353098-9353214,9356997-9357077,9357204-9357272,
9357727-9357790,9357988-9358067,9358164-9358247,
9358418-9358502,9359658-9359743,9359924-9360045,
9360841-9360901,9360981-9361166,9363622-9363723,
9363803-9363844,9363949-9364086
Length = 539
Score = 36.3 bits (80), Expect = 0.029
Identities = 23/97 (23%), Positives = 44/97 (45%), Gaps = 6/97 (6%)
Frame = +3
Query: 6 IAAIIITGNEKAFAAGADIKEMQNNTYSSNTKQG---FLREW---EDISNCGKPIIAAVN 167
+ +I+ G +AF AG D+ + + + + K G F E+ I+ KP ++ +
Sbjct: 184 VKLLIVKGKGRAFCAGGDVAAVVRSINNDSWKYGAHFFRNEFLLNYIIATYSKPQVSLLT 243
Query: 168 GFALGGGCELAMLCDIIYAGEKAKFGQPESTLAPSPE 278
G +GGG +++ + F PE+ L P+
Sbjct: 244 GIVMGGGAGVSIHGRFRVVTDSTVFAMPETALGLFPD 280
>10_08_1007 -
22210263-22210400,22210506-22210547,22210626-22210727,
22212239-22212337,22212413-22212473,22213311-22213432,
22217700-22217786,22217958-22218041,22218141-22218220,
22218404-22218467,22218904-22218972,22219099-22219179,
22219626-22219694,22220108-22220140
Length = 376
Score = 36.3 bits (80), Expect = 0.029
Identities = 25/98 (25%), Positives = 48/98 (48%), Gaps = 7/98 (7%)
Frame = +3
Query: 6 IAAIIITGNEKAFAAGADI----KEMQNNT--YSSNT-KQGFLREWEDISNCGKPIIAAV 164
+ +I+ G +AF AG D+ + + N++ YS++ + FL + I+ KP ++ +
Sbjct: 78 VKLLIVKGKGRAFCAGGDVAAVVRSINNDSWKYSAHFFRNEFLLNYI-IATYNKPQVSLL 136
Query: 165 NGFALGGGCELAMLCDIIYAGEKAKFGQPESTLAPSPE 278
G +GGG +++ E F PE+ L P+
Sbjct: 137 TGIVMGGGAGVSIHGRFRVVTESTVFAMPETALGLFPD 174
>01_01_0746 + 5772340-5773083
Length = 247
Score = 32.3 bits (70), Expect = 0.47
Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Frame = +3
Query: 12 AIIITGNEKAFAAGADIKEMQNNTYSSNTKQG--FLREWEDISNCGKPIIAAVNGFALGG 185
A++I G K F+ G D+ + + G F D+ P +AAV G A
Sbjct: 54 ALVIAGEGKYFSNGFDLDWARTVPAELHASMGGAFRGLVADLLALPVPTVAAVTGHAAAA 113
Query: 186 GCELAMLCDII 218
GC LA+ D +
Sbjct: 114 GCALALAHDAV 124
>02_05_0363 - 28297295-28298167
Length = 290
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/31 (51%), Positives = 17/31 (54%)
Frame = -3
Query: 199 ASSQPPPRAKPLTAAMMGFPQLEMSSHSRRK 107
ASS PPP A P AA FP+ SRRK
Sbjct: 35 ASSSPPPPAAPPAAAAPAFPRSVSPYVSRRK 65
>01_06_1525 +
37988037-37988237,37988315-37988410,37988508-37988620,
37988739-37988805,37988891-37988983,37989095-37989238,
37989681-37989769,37989912-37990017,37990224-37990311,
37990395-37990513,37990786-37990950,37991222-37991406,
37991568-37991668,37991960-37992069,37992287-37992394,
37992596-37992706,37992791-37993002,37993087-37993423,
37993593-37993619,37993767-37993877
Length = 860
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +1
Query: 232 RRNSVNPSQHWHH-PRSRRHPASSQIRWQVESNGD 333
RR P+Q W+H PRS HP+ + + E GD
Sbjct: 693 RRGCGQPTQRWYHVPRSWFHPSGNTLVIFEEKGGD 727
>10_08_0871 -
21181798-21181917,21182024-21182065,21182162-21182191,
21182227-21182328,21182414-21182512,21182824-21182884,
21183447-21183568,21183673-21183758,21183880-21183964,
21184125-21184208,21184292-21184371,21184722-21184785,
21184859-21184927,21185263-21185343,21185438-21185578
Length = 421
Score = 29.1 bits (62), Expect = 4.4
Identities = 23/101 (22%), Positives = 45/101 (44%), Gaps = 6/101 (5%)
Frame = +3
Query: 3 NIAAIIITGNEKAFAAGADI---KEMQNNTYSSNTKQGFLREWEDISNCG---KPIIAAV 164
+I +++ G+ +AF AG D+ ++ + K F + I G KP +A +
Sbjct: 90 DIGFVMMKGSGRAFCAGGDVVRLHQLISEGKLDECKDFFKTLYSFIYVLGTYLKPHVAIL 149
Query: 165 NGFALGGGCELAMLCDIIYAGEKAKFGQPESTLAPSPEPEA 287
+G +GGG +++ ++ F PE + P+ A
Sbjct: 150 DGVTMGGGGGVSIPGTFRIVTDRTVFATPEVHIGFHPDAAA 190
>09_04_0597 -
18859601-18859818,18860914-18861083,18861250-18861303,
18862759-18863284,18864465-18864663,18866787-18866852,
18866999-18867300,18867394-18867634,18867716-18867973,
18868076-18868207
Length = 721
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +3
Query: 222 AGEKAKFGQPESTLAPSPEPEAPSVFPDTLASRKQWR 332
AGE + P+ +AP P+P P+ F L QWR
Sbjct: 288 AGEAPYYQWPQHCMAPPPQPPLPAFF---LVLAAQWR 321
>08_01_0493 - 4297761-4298288
Length = 175
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +1
Query: 208 AISSMPAKRRNSVNPSQHWHHPRSRRHPASSQI 306
+IS A R N + P H HHP +H S +
Sbjct: 82 SISGAAAARTNFLYPDMHHHHPSPPQHALSPAV 114
>06_01_1074 -
8765183-8765278,8765657-8765749,8766520-8766600,
8767092-8767173,8767261-8767313,8767391-8767456,
8767534-8767697,8768028-8768295
Length = 300
Score = 28.3 bits (60), Expect = 7.7
Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +1
Query: 214 SSMPAKRRNSVNPSQHWHHPRSRRHPAS-SQIRWQVESNGDRVDRK 348
S+ P R P+ H H R+R PAS S +R NG D +
Sbjct: 3 SAAPRSRLTPPTPAMHPHRKRARSPPASGSLVRCSSSGNGAPRDHR 48
>01_07_0157 -
41547505-41547861,41547949-41548078,41548180-41548469,
41548561-41548742,41548838-41549057,41550806-41550824,
41551104-41551364,41551466-41551584
Length = 525
Score = 28.3 bits (60), Expect = 7.7
Identities = 18/64 (28%), Positives = 25/64 (39%), Gaps = 1/64 (1%)
Frame = -1
Query: 609 SLFNKCCHTFFAVLRSKGSIEGGLLKLQARFEGGS*AWFTACLAN-FTINGEWVPILSAS 433
S FN C A + S GGL A+ G A F + + F I G+W S
Sbjct: 82 SAFNGCMALSMAEICSAYPTSGGLYYWSAKLAGNDWAPFASWITGWFNITGQWAATTSVD 141
Query: 432 LMVS 421
++
Sbjct: 142 FALA 145
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,375,742
Number of Sequences: 37544
Number of extensions: 591938
Number of successful extensions: 1955
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1840
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1944
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2232933960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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