Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30866
(816 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_43237| Best HMM Match : No HMM Matches (HMM E-Value=.) 124 7e-29
SB_6823| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 6e-09
SB_54248| Best HMM Match : ECH (HMM E-Value=6.6e-11) 56 3e-08
SB_56934| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 7e-07
SB_31954| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 2e-05
SB_58262| Best HMM Match : Cytochrom_B_C (HMM E-Value=0.77) 43 3e-04
SB_26566| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_56936| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_20978| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_20977| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_31836| Best HMM Match : ECH (HMM E-Value=3.3e-06) 36 0.030
SB_19701| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.16
SB_32164| Best HMM Match : ECH (HMM E-Value=0.02) 33 0.21
SB_5024| Best HMM Match : rve (HMM E-Value=6.3e-36) 33 0.28
SB_46122| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.48
SB_12455| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.84
SB_43631| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.5
SB_55505| Best HMM Match : Trypsin (HMM E-Value=0) 29 4.5
SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19) 29 4.5
SB_14511| Best HMM Match : Keratin_B2 (HMM E-Value=2.2) 29 4.5
SB_2086| Best HMM Match : 7tm_1 (HMM E-Value=9.1e-07) 29 4.5
SB_39061| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_12399| Best HMM Match : DUF885 (HMM E-Value=2.3e-08) 28 7.9
>SB_43237| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 311
Score = 124 bits (300), Expect = 7e-29
Identities = 57/91 (62%), Positives = 66/91 (72%)
Frame = +3
Query: 3 NIAAIIITGNEKAFAAGADIKEMQNNTYSSNTKQGFLREWEDISNCGKPIIAAVNGFALG 182
N+ I++TG +AFAAGADIKEMQ TY FL W +S C KP+IAAVNGFALG
Sbjct: 85 NVGCIVLTGCGRAFAAGADIKEMQPLTYQKCLSGDFLGHWTRVSKCTKPVIAAVNGFALG 144
Query: 183 GGCELAMLCDIIYAGEKAKFGQPESTLAPSP 275
GGCELAM+CDIIYA +KAKFGQPE + P
Sbjct: 145 GGCELAMMCDIIYASDKAKFGQPEILIGTIP 175
Score = 92.3 bits (219), Expect = 4e-19
Identities = 49/89 (55%), Positives = 60/89 (67%)
Frame = +2
Query: 230 KGEIRSTRVNIGTIPGAGGTQRLPRYVGKSKAMEIVLTGNFFDAHEAEKMGLVSKVFPVE 409
K + + IGTIPGAGGTQRL R VGKS AME+VLTG+ +A A K GLVSKVFP +
Sbjct: 161 KAKFGQPEILIGTIPGAGGTQRLTRAVGKSLAMEMVLTGDPINADHALKAGLVSKVFPAD 220
Query: 410 KLLEETIKLAERIGTHSPLIVKLAKQAVN 496
L+ IK AE+I S L V +AK+ +N
Sbjct: 221 DLVPNAIKTAEKIAGLSKLSVGIAKECLN 249
Score = 57.6 bits (133), Expect = 1e-08
Identities = 25/39 (64%), Positives = 31/39 (79%)
Frame = +1
Query: 511 TLKSGLQFEKSTFYGTFATEDRKEGMTAFVEKRPPNFKN 627
TL+ GL+ EK F+ TFA +DRKEGMTAF+EKR P FK+
Sbjct: 272 TLEEGLKVEKRMFHTTFALDDRKEGMTAFIEKRKPEFKD 310
>SB_6823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 287
Score = 58.4 bits (135), Expect = 6e-09
Identities = 26/56 (46%), Positives = 40/56 (71%)
Frame = +2
Query: 281 GGTQRLPRYVGKSKAMEIVLTGNFFDAHEAEKMGLVSKVFPVEKLLEETIKLAERI 448
GG RLP +G S+A+++++TG A EA ++GLV++V P K +EE IK+AE+I
Sbjct: 167 GGAVRLPYLIGLSRALDLIMTGRAVKAQEAIEIGLVNRVVPKGKAIEEAIKIAEKI 222
Score = 54.0 bits (124), Expect = 1e-07
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Frame = +3
Query: 3 NIAAIIITGNEKAFAAGADIKEMQNNTYSSNTKQGFLREWED--ISNCGKPIIAAVNGFA 176
++ ++TG F AG+D++E+ + K + D ++ +P+I A+ G+A
Sbjct: 72 SVNVAVLTGKGGNFCAGSDLQELAQKDAETYMKSFYPPGEGDGPMAEANQPVIGAIQGYA 131
Query: 177 LGGGCELAMLCDIIYAGEKAKFG 245
+GGG ELA+LCD+ E + FG
Sbjct: 132 VGGGLELALLCDLRVCEEDSVFG 154
>SB_54248| Best HMM Match : ECH (HMM E-Value=6.6e-11)
Length = 230
Score = 56.0 bits (129), Expect = 3e-08
Identities = 26/53 (49%), Positives = 37/53 (69%)
Frame = +2
Query: 230 KGEIRSTRVNIGTIPGAGGTQRLPRYVGKSKAMEIVLTGNFFDAHEAEKMGLV 388
K + + V +G +PGAGGTQRLPR VG +++++LTG A +A+KMGLV
Sbjct: 35 KTVLSAPEVMLGLLPGAGGTQRLPRLVGLPDSLDMMLTGKNIRAQKAKKMGLV 87
Score = 33.1 bits (72), Expect = 0.28
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +3
Query: 144 KPIIAAVNGFALGGGCELAMLC 209
KP++AA+ G +GGG ELA+ C
Sbjct: 4 KPVVAAIMGTCMGGGLELALSC 25
>SB_56934| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2541
Score = 51.6 bits (118), Expect = 7e-07
Identities = 33/82 (40%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Frame = +3
Query: 3 NIAAIIITGNEKAFAAGADIKEM--QNNTYSSNTK---QGFLREWEDISNCGKPIIAAVN 167
++ ++I G K F +G D + + NTK + F E I +C KPIIAAVN
Sbjct: 293 DVNVVVIIGAGKYFCSGLDYTCVFTRGPQQKQNTKLLVERFKLLVEVIIHCSKPIIAAVN 352
Query: 168 GFALGGGCELAMLCDIIYAGEK 233
G A G G L LCDI+Y EK
Sbjct: 353 GDAKGFGTSLVALCDIVYVCEK 374
>SB_31954| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 328
Score = 47.2 bits (107), Expect = 2e-05
Identities = 30/85 (35%), Positives = 45/85 (52%)
Frame = +2
Query: 230 KGEIRSTRVNIGTIPGAGGTQRLPRYVGKSKAMEIVLTGNFFDAHEAEKMGLVSKVFPVE 409
K + + VNIG G L R V + AME++LTG A EA + GLVS+V P +
Sbjct: 112 KSQFATPGVNIGLFCSTPGVA-LARAVPRKVAMEMLLTGRPITAGEALRHGLVSRVVPED 170
Query: 410 KLLEETIKLAERIGTHSPLIVKLAK 484
+L E +++ +I S +V + K
Sbjct: 171 QLENEVNRISSKIAEVSRPVVAMGK 195
Score = 32.3 bits (70), Expect = 0.48
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 150 IIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQP 251
+I G A GC+L CD+ A +K++F P
Sbjct: 85 LILLSTGLATAAGCQLVASCDVAVASDKSQFATP 118
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +1
Query: 475 VGQTSCEPSLRATLKSGLQFEKSTFYGTFATEDRKEGMTAFVEKR-PPN 618
+G+ + T ++ ++ ED KEG+ AFVEKR PPN
Sbjct: 193 MGKACFYSQVAQTRDQAYKYAENVMIENLKMEDGKEGIKAFVEKRMPPN 241
>SB_58262| Best HMM Match : Cytochrom_B_C (HMM E-Value=0.77)
Length = 393
Score = 42.7 bits (96), Expect = 3e-04
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = +3
Query: 144 KPIIAAVNGFALGGGCELAMLCDIIYAGEKAKF 242
KP+I A+ G+A+GGG ELA+LCD+ E + F
Sbjct: 358 KPVIGAIQGYAVGGGLELALLCDLRVCEEDSVF 390
>SB_26566| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1141
Score = 42.3 bits (95), Expect = 5e-04
Identities = 23/59 (38%), Positives = 31/59 (52%)
Frame = +2
Query: 236 EIRSTRVNIGTIPGAGGTQRLPRYVGKSKAMEIVLTGNFFDAHEAEKMGLVSKVFPVEK 412
EI+ + +G PG GG RL + VG+ KAMEI+L E+ GLV P +K
Sbjct: 1016 EIKFVQARMGLTPGWGGGARLVQLVGRQKAMEILLQCKSMKLEESLMCGLVDGELPNDK 1074
>SB_56936| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 325
Score = 41.1 bits (92), Expect = 0.001
Identities = 20/53 (37%), Positives = 31/53 (58%)
Frame = +3
Query: 144 KPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPESTLAPSPEPEAPSVFP 302
KP++AA+NG A+G + L D+++A ++A F P L SPE + FP
Sbjct: 168 KPLVAAINGPAVGISVTVLGLFDLVFATDRATFHTPFMELGQSPEGCSSFTFP 220
>SB_20978| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1683
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Frame = +3
Query: 42 FAAGADIKEMQNNTYSS--NTKQGFLREWEDISNCGKPIIAAVNGFALGGGCELAMLCDI 215
F AG D+KE+ S ++ F W + +AA+ G A+ GGC L++ CD
Sbjct: 1478 FCAGLDLKEVLALRKSKLVTFRKTFQDMWSRLYGSRLVTMAAIKGHAIAGGCVLSLACDY 1537
Query: 216 IYAGEKAKFGQPESTL 263
+ G PE +L
Sbjct: 1538 SVMASDFRIGLPELSL 1553
Score = 37.1 bits (82), Expect = 0.017
Identities = 20/54 (37%), Positives = 31/54 (57%)
Frame = +2
Query: 272 PGAGGTQRLPRYVGKSKAMEIVLTGNFFDAHEAEKMGLVSKVFPVEKLLEETIK 433
P GT L VG+++A +I+ FDA +A +GL+ KV V+ ++ ET K
Sbjct: 1559 PWMAGT--LSNAVGRNRAEKIIYNAQVFDADDAAGIGLIDKVTHVDAVMTETRK 1610
>SB_20977| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 240
Score = 39.1 bits (87), Expect = 0.004
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 7/73 (9%)
Frame = +3
Query: 15 IIITGNEKAFAAGAD-IKEMQNNTYSSNTKQGFL--REWEDI--SNCGKPI--IAAVNGF 173
I+ + K F+AG D +KE+ Y S+ K+ F+ R ++D+ G + +AAVNG
Sbjct: 36 IVTSSMPKVFSAGLDLVKEL----YKSDEKRLFVFWRRFQDVWMQLYGSRLATVAAVNGH 91
Query: 174 ALGGGCELAMLCD 212
A+ GGC LA CD
Sbjct: 92 AVAGGCLLAAACD 104
Score = 37.9 bits (84), Expect = 0.010
Identities = 19/46 (41%), Positives = 24/46 (52%)
Frame = +2
Query: 287 TQRLPRYVGKSKAMEIVLTGNFFDAHEAEKMGLVSKVFPVEKLLEE 424
+Q + VG S I G A EA+K+GLV V P EKL+ E
Sbjct: 130 SQNIVNLVGTSTGERICALGTMLSAEEAQKIGLVDHVVPQEKLMAE 175
>SB_31836| Best HMM Match : ECH (HMM E-Value=3.3e-06)
Length = 149
Score = 36.3 bits (80), Expect = 0.030
Identities = 18/45 (40%), Positives = 23/45 (51%)
Frame = +3
Query: 129 ISNCGKPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPESTL 263
I C KP+IAAV+ +GGG ++ CDI A F E L
Sbjct: 35 IEKCEKPVIAAVHSACVGGGVDMICACDIRLCTSDAWFQVKEVEL 79
>SB_19701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 509
Score = 33.9 bits (74), Expect = 0.16
Identities = 17/64 (26%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Frame = +3
Query: 12 AIIITGNEKAFAAGADI---KEMQNNTYSSNTKQGFLREWEDISNCGKPIIAAVNGFALG 182
+++++ + AGADI K +N + +G + ++ + + KP++AA+ G +G
Sbjct: 83 SVLMSAKPGCWIAGADINMLKAGENAAQVTEIAKGGQQVYQFLEDSPKPVVAAIMGTCMG 142
Query: 183 GGCE 194
GG E
Sbjct: 143 GGLE 146
>SB_32164| Best HMM Match : ECH (HMM E-Value=0.02)
Length = 280
Score = 33.5 bits (73), Expect = 0.21
Identities = 19/68 (27%), Positives = 27/68 (39%)
Frame = +2
Query: 209 RYHLCRRKGEIRSTRVNIGTIPGAGGTQRLPRYVGKSKAMEIVLTGNFFDAHEAEKMGLV 388
RY + K IG P GG LPR GK + + LTG + + G+
Sbjct: 130 RYRVATEKTTFAMPETAIGFFPDVGGAHALPRLSGK-LGLFLALTGQRLKGYNVKLAGIA 188
Query: 389 SKVFPVEK 412
+ +EK
Sbjct: 189 THYVTLEK 196
>SB_5024| Best HMM Match : rve (HMM E-Value=6.3e-36)
Length = 1677
Score = 33.1 bits (72), Expect = 0.28
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +1
Query: 202 CCAISSMPAKRRNSVNPSQHWHHPRSRRHPASSQIRWQVESNG 330
CC ++S+P R N P Q + RRH A + V +NG
Sbjct: 1591 CCDVTSVPYIRTNHSTPFQPTNQNAPRRHDAQTTFTTHVSNNG 1633
>SB_46122| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 743
Score = 32.3 bits (70), Expect = 0.48
Identities = 17/60 (28%), Positives = 29/60 (48%)
Frame = +3
Query: 123 EDISNCGKPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPESTLAPSPEPEAPSVFP 302
+ I + KPI+A ++ A G G +L +CD++ ++A G P + P FP
Sbjct: 581 QTIQHFPKPIVATISKPAHGLGAQLVAMCDMVC--DEASLGSPIDVASAKANGIVPYCFP 638
>SB_12455| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 64
Score = 31.5 bits (68), Expect = 0.84
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +3
Query: 96 TKQGFLREWEDISNCGKPIIAAVNGFAL 179
T++ LR ++DIS C + I VNGF++
Sbjct: 30 TRERLLRSYQDISECNRRIHGPVNGFSI 57
>SB_43631| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1157
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Frame = -1
Query: 375 FSAS*ASKKFPVNTISIAFDLPTYLGRRWVPPAPGM----VPMLTRVDRISPFR 226
F+ S A KK + +IS+ LG + PP PG+ VP++ DR P+R
Sbjct: 603 FTPSSARKKSTIPSISLESGETFQLGVLFTPPRPGLFIAHVPVILNDDRDHPYR 656
>SB_55505| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 292
Score = 29.1 bits (62), Expect = 4.5
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 196 WQCCAISSMPAKRRNSVNPSQHWHHPRSRRHPAS 297
W+ A + MP+K N+ S W HP+ + + AS
Sbjct: 90 WRVVAGNDMPSKAVNTTGVSAIWRHPQYKSNIAS 123
>SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19)
Length = 1211
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = -3
Query: 232 FSPA*MISHSIASSQPPPRAKPLTAAMMGFPQLEMSSHSRRKPCFVLL 89
F+ A + SH + SQP P + P A++ ++H KPCF L
Sbjct: 458 FNQALLHSHP-SPSQPSPVSHPPAQALLHTSHPSPATHPSPKPCFTFL 504
>SB_14511| Best HMM Match : Keratin_B2 (HMM E-Value=2.2)
Length = 276
Score = 29.1 bits (62), Expect = 4.5
Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Frame = -2
Query: 371 RLHEHQRSFLSTRS---PLLSTCQRIWEDAGCLR-LRGWCQ 261
R+H R F++ S PLLSTCQR+ C R L CQ
Sbjct: 182 RVHSSMRPFVNASSRQLPLLSTCQRVLSST-CKRVLSSTCQ 221
>SB_2086| Best HMM Match : 7tm_1 (HMM E-Value=9.1e-07)
Length = 827
Score = 29.1 bits (62), Expect = 4.5
Identities = 21/57 (36%), Positives = 29/57 (50%)
Frame = +3
Query: 258 TLAPSPEPEAPSVFPDTLASRKQWRSC*QETSLMLMKPRKWVLSVKYSQWKNF*KKP 428
TL P PEPE+P D + S KQ S ++ L+ KP++ + YS N KP
Sbjct: 367 TLEP-PEPESPEKVSDPIQSSKQ--SFQKDDLLLEDKPKEELNPEGYSSQTNIPTKP 420
>SB_39061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2362
Score = 28.3 bits (60), Expect = 7.9
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = -2
Query: 638 KIYSFLKFGGLFSTNAVIPSLRSSVAKVP*KV 543
K++S LK GG + +A+ P+L ++K+P +V
Sbjct: 280 KLWSLLKNGGSGNASAIFPNLLPFISKLPAQV 311
>SB_12399| Best HMM Match : DUF885 (HMM E-Value=2.3e-08)
Length = 718
Score = 28.3 bits (60), Expect = 7.9
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -2
Query: 665 QHRKHENRGKIYSFLKFGGLFSTNAVIPSLRSSVAKVP 552
+H KH+ R I+ LKF FS +PSLR ++P
Sbjct: 586 KHAKHQKRSGIFCRLKFFKSFSVK--LPSLRGPKFEMP 621
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,167,623
Number of Sequences: 59808
Number of extensions: 622991
Number of successful extensions: 1656
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1517
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1655
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2275631710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -