Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30866
(816 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g16800.1 68417.m02537 enoyl-CoA hydratase, putative similar t... 74 1e-13
At1g60550.1 68414.m06816 naphthoate synthase, putative / dihydro... 62 6e-10
At3g06860.1 68416.m00814 fatty acid multifunctional protein (MFP... 61 7e-10
At5g43280.1 68418.m05290 enoyl-CoA hydratase/isomerase family pr... 58 5e-09
At4g29010.1 68417.m04147 abnormal inflorescence meristem 1 / fat... 58 5e-09
At4g16210.1 68417.m02460 enoyl-CoA hydratase/isomerase family pr... 56 2e-08
At2g30660.1 68415.m03739 3-hydroxyisobutyryl-coenzyme A hydrolas... 40 0.001
At1g06550.1 68414.m00694 enoyl-CoA hydratase/isomerase family pr... 39 0.005
At2g30650.1 68415.m03738 3-hydroxyisobutyryl-coenzyme A hydrolas... 38 0.006
At5g65940.1 68418.m08301 3-hydroxyisobutyryl-coenzyme A hydrolas... 38 0.008
At3g60510.1 68416.m06768 enoyl-CoA hydratase/isomerase family pr... 37 0.018
At1g65520.1 68414.m07434 enoyl-CoA hydratase/isomerase family pr... 37 0.018
At4g31810.1 68417.m04521 enoyl-CoA hydratase/isomerase family pr... 33 0.30
At1g76870.1 68414.m08945 hypothetical protein 31 1.2
At2g41020.2 68415.m05066 WW domain-containing protein contains P... 29 2.8
At2g41020.1 68415.m05067 WW domain-containing protein contains P... 29 2.8
At1g55690.3 68414.m06377 SEC14 cytosolic factor family protein /... 29 2.8
At1g55690.2 68414.m06376 SEC14 cytosolic factor family protein /... 29 2.8
At1g55690.1 68414.m06375 SEC14 cytosolic factor family protein /... 29 2.8
At1g71740.1 68414.m08292 hypothetical protein 29 3.7
At5g22440.1 68418.m02617 60S ribosomal protein L10A (RPL10aC) 28 6.4
At2g27530.2 68415.m03331 60S ribosomal protein L10A (RPL10aB) 28 6.4
At2g27530.1 68415.m03330 60S ribosomal protein L10A (RPL10aB) 28 6.4
At5g05970.1 68418.m00661 transducin family protein / WD-40 repea... 28 8.5
At4g15820.1 68417.m02407 wound-responsive protein-related contai... 28 8.5
At4g14430.1 68417.m02226 enoyl-CoA hydratase/isomerase family pr... 28 8.5
At4g13410.1 68417.m02094 glycosyl transferase family 2 protein s... 28 8.5
At3g08680.2 68416.m01009 leucine-rich repeat transmembrane prote... 28 8.5
At3g08680.1 68416.m01008 leucine-rich repeat transmembrane prote... 28 8.5
At1g26760.1 68414.m03258 SET domain-containing protein contains ... 28 8.5
>At4g16800.1 68417.m02537 enoyl-CoA hydratase, putative similar to
AU-binding protein/Enoyl-CoA hydratase [Homo sapiens]
GI:780241, [Mus musculus]GI:6840920; contains Pfam
profile PF00378 enoyl-CoA hydratase/isomerase family
protein
Length = 229
Score = 74.1 bits (174), Expect = 1e-13
Identities = 36/97 (37%), Positives = 55/97 (56%)
Frame = +2
Query: 218 LCRRKGEIRSTRVNIGTIPGAGGTQRLPRYVGKSKAMEIVLTGNFFDAHEAEKMGLVSKV 397
+C + IPGAGGTQRL R VG+S + E++ TG DA EA GLV+
Sbjct: 92 ICGENAVFGLPETGLAIIPGAGGTQRLSRLVGRSVSKELIFTGRKIDAIEAANKGLVNIC 151
Query: 398 FPVEKLLEETIKLAERIGTHSPLIVKLAKQAVNQAYE 508
+ E+ I++A++I PL +K+AK+A+++ E
Sbjct: 152 VTAGEAHEKAIEMAQQINEKGPLAIKMAKKAIDEGIE 188
Score = 59.7 bits (138), Expect = 2e-09
Identities = 36/80 (45%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Frame = +3
Query: 42 FAAGADIKEMQNNTYSS-NTKQGFLRE-WEDISNCGKPIIAAVNGFALGGGCELAMLCDI 215
F AGAD+KE + + S +T LR + I P IAA+ G ALGGG E+A+ CD+
Sbjct: 31 FCAGADLKERRTMSPSEVHTYVNSLRYMFSFIEALSIPTIAAIEGAALGGGLEMALACDL 90
Query: 216 IYAGEKAKFGQPESTLAPSP 275
GE A FG PE+ LA P
Sbjct: 91 RICGENAVFGLPETGLAIIP 110
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +1
Query: 460 PVNCEVGQTSCEPSLRATLKSGLQFEKSTFYGTFATEDRKEGMTAFVEKRPP 615
P+ ++ + + + + + SGL+ E+ + T+DR EG+ AF EKR P
Sbjct: 173 PLAIKMAKKAIDEGIETNMASGLEVEEMCYQKLLNTQDRLEGLAAFAEKRKP 224
>At1g60550.1 68414.m06816 naphthoate synthase, putative /
dihydroxynaphthoic acid synthetase, putative / DHNA
synthetase, putative contains similarity to MENB from
Escherichia coli [SP|P27290], Bacillus subtilis
[SP|P23966]; contains Pfam profile PF00378 enoyl-CoA
hydratase/isomerase family protein
Length = 337
Score = 61.7 bits (143), Expect = 6e-10
Identities = 31/83 (37%), Positives = 47/83 (56%)
Frame = +2
Query: 248 TRVNIGTIPGAGGTQRLPRYVGKSKAMEIVLTGNFFDAHEAEKMGLVSKVFPVEKLLEET 427
T +G+ G+ + R VG KA E+ F+ A EAEKMGL++ V P+E L +ET
Sbjct: 207 TGPKVGSFDAGYGSSIMSRLVGPKKAREMWFMTRFYTASEAEKMGLINTVVPLEDLEKET 266
Query: 428 IKLAERIGTHSPLIVKLAKQAVN 496
+K I +SP +++ K A+N
Sbjct: 267 VKWCREILRNSPTAIRVLKAALN 289
Score = 52.8 bits (121), Expect = 3e-07
Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Frame = +3
Query: 3 NIAAIIITGN-EKAFAAGADIKEMQNNTYSSNTKQGFLREWE---DISNCGKPIIAAVNG 170
++ II+TG KAF +G D + Y+ G L + I KP+IA V G
Sbjct: 121 SVGVIILTGKGTKAFCSGGDQALRTQDGYADPNDVGRLNVLDLQVQIRRLPKPVIAMVAG 180
Query: 171 FALGGGCELAMLCDIIYAGEKAKFGQ 248
+A+GGG L M+CD+ A + A FGQ
Sbjct: 181 YAVGGGHILHMVCDLTIAADNAIFGQ 206
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +1
Query: 547 FYGTFATEDRKEGMTAFVEKRPPNF 621
FYGT E+ EG TA++ +RPP+F
Sbjct: 309 FYGT---EEATEGRTAYMHRRPPDF 330
>At3g06860.1 68416.m00814 fatty acid multifunctional protein (MFP2)
identical to fatty acid multifunctional protein (AtMFP2)
GB:AF123254 [gi:4337027] (Arabidopsis thaliana) (fatty
acid beta-oxidation); contains Pfam profiles PF02737
(3-hydroxyacyl-CoA dehydrogenase, NAD binding domain),
PF00378 (enoyl-CoA hydratase/isomerase family protein),
PF00725 (3-hydroxyacyl-CoA dehydrogenase)
Length = 725
Score = 61.3 bits (142), Expect = 7e-10
Identities = 30/78 (38%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Frame = +2
Query: 254 VNIGTIPGAGGTQRLPRYVGKSKAMEIVLTGNFFDAHEAEKMGLVSKVFPVEKLLEETIK 433
+ +G IPG GGTQRLPR VG +KA+E++LT A E +GL+ V P +L+ +
Sbjct: 140 LQLGVIPGFGGTQRLPRLVGLTKALEMILTSKPVKAEEGHSLGLIDAVVPPAELVTTARR 199
Query: 434 LA-ERIGTHSPLIVKLAK 484
A + +G P + ++K
Sbjct: 200 WALDIVGRRKPWVSSVSK 217
Score = 53.6 bits (123), Expect = 1e-07
Identities = 35/97 (36%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
Frame = +3
Query: 3 NIAAIIITGNEKAFAAGADIK---EMQNNTYSSNTKQGFLRE---WEDISNCGKPIIAAV 164
++ AI+ITG + F+ G DI EMQ K G++ + + KP +AA+
Sbjct: 51 DVKAIVITGAKGRFSGGFDISGFGEMQKGNVKE-PKAGYISIDIITDLLEAARKPSVAAI 109
Query: 165 NGFALGGGCELAMLCDIIYAGEKAKFGQPESTLAPSP 275
+G ALGGG ELAM C + A+ G PE L P
Sbjct: 110 DGLALGGGLELAMACHARISAPAAQLGLPELQLGVIP 146
>At5g43280.1 68418.m05290 enoyl-CoA hydratase/isomerase family
protein similar to Delta 3,5-delta2,4-dienoyl-CoA
isomerase, mitochondrial (ECH1) from Rattus norvegicus
[SP|Q62651], from Homo sapiens [SP|Q13011]; contains
Pfam profile PF00378 enoyl-CoA hydratase/isomerase
family protein
Length = 278
Score = 58.4 bits (135), Expect = 5e-09
Identities = 37/102 (36%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
Frame = +2
Query: 206 VRYHLCRRKGEIRSTRVNIGTIPGAGGTQRLPRYVGKSKAMEIVLTGNFFDAHEAEKMGL 385
+RY C V++ + G QRLP VG + AME+ LT F EA+ +GL
Sbjct: 138 IRY--CSEDAFFSIKEVDLAIVADLGTLQRLPSIVGYANAMELALTARRFSGSEAKDLGL 195
Query: 386 VSKVFPVEKLLEETI-KLAERIGTHSPLIVKLAKQAVNQAYE 508
VSKVF + L+ + +AE IG SPL V K + ++ E
Sbjct: 196 VSKVFGSKSELDNGVTTIAEGIGGKSPLAVTGTKAVLLRSRE 237
Score = 50.0 bits (114), Expect = 2e-06
Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 14/102 (13%)
Frame = +3
Query: 3 NIAAIIITGNEKAFAAGADIKEMQNNTYSSNTKQGFLREWED--------------ISNC 140
+++ II++G K F +G D+ + + + S++ R E I C
Sbjct: 54 DVSVIILSGAGKHFCSGIDLNSLSSISTQSSSGNDRGRSSEQLRRKIKSMQAAITAIEQC 113
Query: 141 GKPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPESTLA 266
KP+IAA++G +GGG +L CDI Y E A F E LA
Sbjct: 114 RKPVIAAIHGACIGGGVDLITACDIRYCSEDAFFSIKEVDLA 155
>At4g29010.1 68417.m04147 abnormal inflorescence meristem 1 / fatty
acid multifunctional protein (AIM1) identical to
gi:4337025; contains Pfam profiles PF02737
(3-hydroxyacyl-CoA dehydrogenase, NAD binding domain),
PF00378 (enoyl-CoA hydratase/isomerase family protein),
PF00725 (3-hydroxyacyl-CoA dehydrogenase)
Length = 721
Score = 58.4 bits (135), Expect = 5e-09
Identities = 38/100 (38%), Positives = 50/100 (50%), Gaps = 9/100 (9%)
Frame = +3
Query: 3 NIAAIIITGNEKAFAAGADIKEMQNNTYSSNTKQGFLREWEDIS---------NCGKPII 155
++ AI++ GN F+ G DI N + K G L ++S + KP++
Sbjct: 49 DVKAIVLIGNNGRFSGGFDI-----NVFQQVHKTGDLSLMPEVSVELVCNLMEDSRKPVV 103
Query: 156 AAVNGFALGGGCELAMLCDIIYAGEKAKFGQPESTLAPSP 275
AAV G ALGGG ELAM C A KA+ G PE TL P
Sbjct: 104 AAVEGLALGGGLELAMACHARVAAPKAQLGLPELTLGVIP 143
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/70 (37%), Positives = 40/70 (57%)
Frame = +2
Query: 230 KGEIRSTRVNIGTIPGAGGTQRLPRYVGKSKAMEIVLTGNFFDAHEAEKMGLVSKVFPVE 409
K ++ + +G IPG GGTQRLPR VG +KA +++L + E K+GL+ + P
Sbjct: 129 KAQLGLPELTLGVIPGFGGTQRLPRLVGLAKATDMILLSKSISSEEGHKLGLIDALVPPG 188
Query: 410 KLLEETIKLA 439
+L + K A
Sbjct: 189 DVLSTSRKWA 198
>At4g16210.1 68417.m02460 enoyl-CoA hydratase/isomerase family
protein similar to 3-hydroxybutyryl-CoA dehydratase
(Crotonase) from Clostridium acetobutylicum [SP|P52046],
FadB1x (enoyl-CoA hydratase) from Pseudomonas putida
[GI:13310130]; contains Pfam profile PF00378 enoyl-CoA
hydratase/isomerase family protein
Length = 265
Score = 56.4 bits (130), Expect = 2e-08
Identities = 27/80 (33%), Positives = 44/80 (55%)
Frame = +3
Query: 3 NIAAIIITGNEKAFAAGADIKEMQNNTYSSNTKQGFLREWEDISNCGKPIIAAVNGFALG 182
++ +I TG+ ++F +G D+ ++ + + K + KPII A+NGFA+
Sbjct: 53 SVQVVIFTGSGRSFCSGVDLTAAES-VFKGDVKDPETDPVVQMERLRKPIIGAINGFAIT 111
Query: 183 GGCELAMLCDIIYAGEKAKF 242
G ELA+ CDI+ A AKF
Sbjct: 112 AGFELALACDILVASRGAKF 131
>At2g30660.1 68415.m03739 3-hydroxyisobutyryl-coenzyme A hydrolase,
putative / CoA-thioester hydrolase, putative strong
similarity to gi:8572760; contains Pfam profile PF00388
enoyl-CoA hydratase/isomerase family protein
Length = 378
Score = 40.3 bits (90), Expect = 0.001
Identities = 24/98 (24%), Positives = 45/98 (45%), Gaps = 6/98 (6%)
Frame = +3
Query: 3 NIAAIIITGNEKAFAAGADIKEMQNNTYSSNTKQG--FLREWEDIS----NCGKPIIAAV 164
++ +I+ G +AF AG D+ + N + G F R+ ++ KP ++ +
Sbjct: 49 SVKLVILKGQGRAFCAGGDVPPVVQNMVQGKWRLGADFFRDQYTLNYVMATYSKPQVSIL 108
Query: 165 NGFALGGGCELAMLCDIIYAGEKAKFGQPESTLAPSPE 278
NG +G G +++ A E F PE++L P+
Sbjct: 109 NGIVMGAGAGVSIHGRFRIATENTVFAMPETSLGLFPD 146
>At1g06550.1 68414.m00694 enoyl-CoA hydratase/isomerase family
protein similar to CHY1 [gi:8572760]; contains Pfam
profile PF00388 enoyl-CoA hydratase/isomerase family
protein
Length = 387
Score = 38.7 bits (86), Expect = 0.005
Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Frame = +3
Query: 15 IIITGNEKAFAAGADIKEMQNNTYSSNT--KQGFLREW--EDISNCGKPIIAAVNGFALG 182
I+I G +AF+AG D+K + S ++ + + W I K ++ VNG ++G
Sbjct: 59 ILIKGTGRAFSAGGDLKVFYHGQESKDSCLEVVYRMYWLCYHIHTYKKTQVSLVNGISMG 118
Query: 183 GGCELAMLCDIIYAGEKAKFGQPEST 260
GG L + EK F PE++
Sbjct: 119 GGAALMVPMKFSVVTEKTVFATPEAS 144
>At2g30650.1 68415.m03738 3-hydroxyisobutyryl-coenzyme A hydrolase,
putative / CoA-thioester hydrolase, putative strong
similarity to gi:8572760; contains Pfam profile PF00388
enoyl-CoA hydratase/isomerase family protein
Length = 422
Score = 38.3 bits (85), Expect = 0.006
Identities = 25/99 (25%), Positives = 44/99 (44%), Gaps = 7/99 (7%)
Frame = +3
Query: 3 NIAAIIITGNEKAFAAGADIKEMQNNTYSSNT-------KQGFLREWEDISNCGKPIIAA 161
++ +++ G +AF+AG DI + + K G+ + +S KP ++
Sbjct: 93 SVKLVVLKGQGRAFSAGGDIPPIVRDILQGKLIRGAHYFKVGYTLNYV-LSTYRKPQVSI 151
Query: 162 VNGFALGGGCELAMLCDIIYAGEKAKFGQPESTLAPSPE 278
+NG +GGG L+ A E F PE+ L P+
Sbjct: 152 LNGIVMGGGAGLSTNGRFRIATENTVFAMPETALGLFPD 190
>At5g65940.1 68418.m08301 3-hydroxyisobutyryl-coenzyme A hydrolase /
CoA-thioester hydrolase (CHY1) identical to gi:8572760;
contains Pfam profile PF00388 enoyl-CoA
hydratase/isomerase family protein
Length = 378
Score = 37.9 bits (84), Expect = 0.008
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 6/98 (6%)
Frame = +3
Query: 3 NIAAIIITGNEKAFAAGADIKEMQNNTYSSNTKQG---FLREWE---DISNCGKPIIAAV 164
++ +I+ G+ +AF AG D+ + + N + G F E+ ++ K ++ +
Sbjct: 53 SVKLVILKGHGRAFCAGGDVAAVVRDINQGNWRLGANYFSSEYMLNYVMATYSKAQVSIL 112
Query: 165 NGFALGGGCELAMLCDIIYAGEKAKFGQPESTLAPSPE 278
NG +GGG +++ A E F PE+ L P+
Sbjct: 113 NGIVMGGGAGVSVHGRFRIATENTVFAMPETALGLFPD 150
>At3g60510.1 68416.m06768 enoyl-CoA hydratase/isomerase family
protein similar to enoyl-CoA-hydratase, Avicennia
marina, EMBL:AF190450 [GI:6014701], CoA-thioester
hydrolase CHY1 from Arabidopsis thaliana [GI:8572760];
contains Pfam profile PF00378 enoyl-CoA
hydratase/isomerase family protein
Length = 401
Score = 36.7 bits (81), Expect = 0.018
Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Frame = +3
Query: 3 NIAAIIITGNEKAFAAGADIKEMQN-NTYSSNT--KQGFLREWEDISNCG---KPIIAAV 164
NI +++ G+ +AF AG DI + + T S ++ F + I G KP +A +
Sbjct: 81 NIGFVMMKGSGRAFCAGGDIVSLYHLRTRGSPDAIREFFSSLYSFIYLLGTYLKPHVAIL 140
Query: 165 NGFALGGGCELAMLCDIIYAGEKAKFGQPESTLAPSPEPEA 287
NG +GGG +++ A ++ F PE+ + P+ A
Sbjct: 141 NGVTMGGGTGVSIPGTFRVATDRTIFATPETIIGFHPDAGA 181
>At1g65520.1 68414.m07434 enoyl-CoA hydratase/isomerase family
protein low similarity to enoyl-CoA hydratase
[Escherichia coli] GI:2764828, carnitine racemase
SP|P31551 [Escherichia coli]; contains Pfam profile
PF00378 enoyl-CoA hydratase/isomerase family protein
Length = 240
Score = 36.7 bits (81), Expect = 0.018
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +3
Query: 9 AAIIITGNEKAFAAGADIKEMQNNTYSSNTKQGFLREW-EDISNCGKPIIAAVNGFALGG 185
+ +I T + K F+ G D+ ++N S LR D+ + P IAAV G A
Sbjct: 47 SVLITTSDGKFFSNGYDLALAESNPSLSVVMDAKLRSLVADLISLPMPTIAAVTGHASAA 106
Query: 186 GCELAMLCDII 218
GC LAM D +
Sbjct: 107 GCILAMSHDYV 117
>At4g31810.1 68417.m04521 enoyl-CoA hydratase/isomerase family
protein similar to CHY1 [gi:8572760]; contains Pfam
profile PF00388 enoyl-CoA hydratase/isomerase family
protein
Length = 409
Score = 32.7 bits (71), Expect = 0.30
Identities = 24/100 (24%), Positives = 48/100 (48%), Gaps = 6/100 (6%)
Frame = +3
Query: 6 IAAIIITGNEKAFAAGADIKEMQNNTYSSNTKQG---FLREWEDISNCG---KPIIAAVN 167
I+ +++ G+ K F +GAD+ + ++ NT++ F ++ + G KP IA ++
Sbjct: 86 ISFVLMKGSGKTFCSGADVLSLYHSINEGNTEESKLFFENLYKFVYLQGTYLKPNIAIMD 145
Query: 168 GFALGGGCELAMLCDIIYAGEKAKFGQPESTLAPSPEPEA 287
G +G G +++ A +K PE + P+ A
Sbjct: 146 GVTMGCGGGISLPGMFRVATDKTVLAHPEVQIGFHPDAGA 185
>At1g76870.1 68414.m08945 hypothetical protein
Length = 385
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 211 ISSMPAKRRNSVNPSQHWHHPRSRRHPASSQIRWQVESNGDR 336
+SSM R N++N +Q HHP SR+ + +N DR
Sbjct: 14 VSSMRDLRPNAINQNQKQHHPNSRQDSGFNNTMDTRHNNVDR 55
>At2g41020.2 68415.m05066 WW domain-containing protein contains Pfam
domain PF00397: WW domain
Length = 382
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +3
Query: 129 ISNCGKPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPESTLAPSPEPE 284
+S CG+ + NG+ + GG + YAG G+PE T A + PE
Sbjct: 105 VSTCGEGNVDVGNGYGIPGG--------VAYAGHSELSGKPEPTNASNNLPE 148
>At2g41020.1 68415.m05067 WW domain-containing protein contains Pfam
domain PF00397: WW domain
Length = 463
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +3
Query: 129 ISNCGKPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPESTLAPSPEPE 284
+S CG+ + NG+ + GG + YAG G+PE T A + PE
Sbjct: 105 VSTCGEGNVDVGNGYGIPGG--------VAYAGHSELSGKPEPTNASNNLPE 148
>At1g55690.3 68414.m06377 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein similar to
similar to phosphatidylinositol transfer-like protein IV
(GI:14486707) [Lotus japonicus] and Phosphatidylinositol
Transfer Protein GB:2780955 GI:2780955 [Saccharomyces
cerevisiae]
Length = 621
Score = 29.5 bits (63), Expect = 2.8
Identities = 22/78 (28%), Positives = 39/78 (50%)
Frame = +2
Query: 407 EKLLEETIKLAERIGTHSPLIVKLAKQAVNQAYEPPSNRACSLRSPPSMEPLLRRTAKKV 586
++LL +KLA + ++PL + ++ V+ + + CSL SPP EP ++
Sbjct: 487 KRLLSLMLKLAA-VFRYTPLELLRSQTTVSPSSLTEDDSRCSLISPPPREPTMK------ 539
Query: 587 *QHLLKRDHRISKMNKSF 640
+L RI K+ KS+
Sbjct: 540 -DRILPCLERIQKLEKSY 556
>At1g55690.2 68414.m06376 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein similar to
similar to phosphatidylinositol transfer-like protein IV
(GI:14486707) [Lotus japonicus] and Phosphatidylinositol
Transfer Protein GB:2780955 GI:2780955 [Saccharomyces
cerevisiae]
Length = 625
Score = 29.5 bits (63), Expect = 2.8
Identities = 22/78 (28%), Positives = 39/78 (50%)
Frame = +2
Query: 407 EKLLEETIKLAERIGTHSPLIVKLAKQAVNQAYEPPSNRACSLRSPPSMEPLLRRTAKKV 586
++LL +KLA + ++PL + ++ V+ + + CSL SPP EP ++
Sbjct: 487 KRLLSLMLKLAA-VFRYTPLELLRSQTTVSPSSLTEDDSRCSLISPPPREPTMK------ 539
Query: 587 *QHLLKRDHRISKMNKSF 640
+L RI K+ KS+
Sbjct: 540 -DRILPCLERIQKLEKSY 556
>At1g55690.1 68414.m06375 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein similar to
similar to phosphatidylinositol transfer-like protein IV
(GI:14486707) [Lotus japonicus] and Phosphatidylinositol
Transfer Protein GB:2780955 GI:2780955 [Saccharomyces
cerevisiae]
Length = 625
Score = 29.5 bits (63), Expect = 2.8
Identities = 22/78 (28%), Positives = 39/78 (50%)
Frame = +2
Query: 407 EKLLEETIKLAERIGTHSPLIVKLAKQAVNQAYEPPSNRACSLRSPPSMEPLLRRTAKKV 586
++LL +KLA + ++PL + ++ V+ + + CSL SPP EP ++
Sbjct: 487 KRLLSLMLKLAA-VFRYTPLELLRSQTTVSPSSLTEDDSRCSLISPPPREPTMK------ 539
Query: 587 *QHLLKRDHRISKMNKSF 640
+L RI K+ KS+
Sbjct: 540 -DRILPCLERIQKLEKSY 556
>At1g71740.1 68414.m08292 hypothetical protein
Length = 130
Score = 29.1 bits (62), Expect = 3.7
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 5/37 (13%)
Frame = -3
Query: 202 IASSQPPPRAKPLTAAMMGFPQ-----LEMSSHSRRK 107
+A + PP R KPLT MG + ++SHS+RK
Sbjct: 1 MAQTVPPSRTKPLTIFKMGLASASVRLVNLASHSKRK 37
>At5g22440.1 68418.m02617 60S ribosomal protein L10A (RPL10aC)
Length = 217
Score = 28.3 bits (60), Expect = 6.4
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Frame = +2
Query: 284 GTQRLPRYVGKSKAMEIVLTGNFFDAHEAEKMGLVSKVFPVEKLLEETIKLAERIGT--H 457
G+ +LP +V + K M+I + G+ EAEK+GL S K L + KL +++ H
Sbjct: 51 GSVKLP-HVPRPK-MKICMLGDAQHVEEAEKIGLESMDVEALKKLNKNKKLVKKLAKKFH 108
Query: 458 SPLIVKLAKQAVNQAYEPPSNRA 526
+ L + + + + P N+A
Sbjct: 109 AFLASESVIKQIPRLLGPGLNKA 131
>At2g27530.2 68415.m03331 60S ribosomal protein L10A (RPL10aB)
Length = 216
Score = 28.3 bits (60), Expect = 6.4
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Frame = +2
Query: 284 GTQRLPRYVGKSKAMEIVLTGNFFDAHEAEKMGLVSKVFPVEKLLEETIKLAERIGT--H 457
G+ +LP ++ + K M+I + G+ EAEKMGL + K L + KL +++ H
Sbjct: 50 GSVKLP-HIPRPK-MKICMLGDAQHVEEAEKMGLSNMDVEALKKLNKNKKLVKKLAKSYH 107
Query: 458 SPLIVKLAKQAVNQAYEPPSNRA 526
+ L + + + + P N+A
Sbjct: 108 AFLASESVIKQIPRLLGPGLNKA 130
>At2g27530.1 68415.m03330 60S ribosomal protein L10A (RPL10aB)
Length = 216
Score = 28.3 bits (60), Expect = 6.4
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Frame = +2
Query: 284 GTQRLPRYVGKSKAMEIVLTGNFFDAHEAEKMGLVSKVFPVEKLLEETIKLAERIGT--H 457
G+ +LP ++ + K M+I + G+ EAEKMGL + K L + KL +++ H
Sbjct: 50 GSVKLP-HIPRPK-MKICMLGDAQHVEEAEKMGLSNMDVEALKKLNKNKKLVKKLAKSYH 107
Query: 458 SPLIVKLAKQAVNQAYEPPSNRA 526
+ L + + + + P N+A
Sbjct: 108 AFLASESVIKQIPRLLGPGLNKA 130
>At5g05970.1 68418.m00661 transducin family protein / WD-40 repeat
family protein contains similarity to regulatory protein
Nedd1; contains Pfam PF00400: WD domain, G-beta repeat
(6 copies, 2 weak)|19804256|gb|AV785466.1|AV785466
Length = 781
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = -2
Query: 77 VLHLLNISTSRKSLLVTSDDDGS 9
VL LL+ S S + LLVT+ DDG+
Sbjct: 180 VLRLLDYSRSSRHLLVTAGDDGT 202
>At4g15820.1 68417.m02407 wound-responsive protein-related contains
weak similarity to KED [Nicotiana tabacum]
gi|8096269|dbj|BAA95789
Length = 460
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -2
Query: 104 LFCVAAVCIVLHLLNISTSRKSLLVTSDDDGSNV 3
+F VC VL L + + S K+ V+SD +G+N+
Sbjct: 92 IFAFQTVCAVLFLGDSTKSEKTPEVSSDSEGNNL 125
>At4g14430.1 68417.m02226 enoyl-CoA hydratase/isomerase family
protein low siimilarity to 2-cyclohexenylcarbonyl CoA
isomerase [Streptomyces collinus] GI:8133118, enoyl-CoA
isomerase [Escherichia coli] GI:2764829; contains Pfam
profile PF00378 enoyl-CoA hydratase/isomerase family
protein
Length = 240
Score = 27.9 bits (59), Expect = 8.5
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Frame = +3
Query: 15 IIITGNEKAFAAGADIKEMQ---NNTYSSNTKQGFLREWEDIS----NCGKPIIAAVNGF 173
+I T N K F+ G D+ Q + T ++N + ++ + + P IAA+NG
Sbjct: 48 LITTANGKFFSNGFDLAWAQTAGSKTGAANRLHQMVESFKPVVAALLDLPMPTIAALNGH 107
Query: 174 ALGGGCELAMLCDIIY 221
A G LA+ D ++
Sbjct: 108 AAAAGLILALSHDYVF 123
>At4g13410.1 68417.m02094 glycosyl transferase family 2 protein
similar to beta-(1-3)-glucosyl transferase GB:AAC62210
GI:3687658 from [Bradyrhizobium japonicum], cellulose
synthase from Agrobacterium tumeficiens [gi:710492] and
Agrobacterium radiobacter [gi:710493]; contains Pfam
glycosyl transferase, group 2 family protein domain
PF00535
Length = 537
Score = 27.9 bits (59), Expect = 8.5
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +2
Query: 698 VKLSGKYNIVYNFYILTKKIVQIFLY 775
VK+ K+ ++Y+F+ L K +V F Y
Sbjct: 364 VKIWKKFYVIYSFFFLRKIVVHFFTY 389
>At3g08680.2 68416.m01009 leucine-rich repeat transmembrane protein
kinase, putative contains Pfam profile: PF00069
Eukaryotic protein kinase domain, PF00560 leucine Rich
Repeat (5 copies)
Length = 640
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +3
Query: 249 PESTLAPSPEPEAPSVFPDT 308
PE+T APSP P P+ P T
Sbjct: 226 PENTTAPSPSPTTPTEGPGT 245
>At3g08680.1 68416.m01008 leucine-rich repeat transmembrane protein
kinase, putative contains Pfam profile: PF00069
Eukaryotic protein kinase domain, PF00560 leucine Rich
Repeat (5 copies)
Length = 640
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +3
Query: 249 PESTLAPSPEPEAPSVFPDT 308
PE+T APSP P P+ P T
Sbjct: 226 PENTTAPSPSPTTPTEGPGT 245
>At1g26760.1 68414.m03258 SET domain-containing protein contains
Pfam profiles PF00856: SET domain, PF00515:
tetratricopeptide repeat (TPR) domain
Length = 967
Score = 27.9 bits (59), Expect = 8.5
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = +1
Query: 196 WQCCAISSMPAKRRNSVNPSQH--WHHPRSRRHPASSQIRWQVESNGDRVDR 345
W I S KR S N + W+H S+++P S I V +NG +R
Sbjct: 79 WHSEEIGSPVVKRFLSDNEERWYMWYHGSSKQNPVSDSIGLAVSNNGIHWER 130
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,369,817
Number of Sequences: 28952
Number of extensions: 459197
Number of successful extensions: 1398
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1316
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1389
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1863090400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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