Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30865
         (675 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    22   4.7  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    22   4.7  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               22   4.7  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    22   4.7  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   6.1  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    22   6.1  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    22   6.1  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    22   6.1  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          21   8.1  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    21   8.1  

>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +2

Query: 542 DCCYPCRSSRVCXHVCAAGDSRN 610
           D C  CR+  +C  V +AG+S++
Sbjct: 56  DAC--CRTHDMCPDVMSAGESKH 76


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +2

Query: 542 DCCYPCRSSRVCXHVCAAGDSRN 610
           D C  CR+  +C  V +AG+S++
Sbjct: 61  DAC--CRTHDMCPDVMSAGESKH 81


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 611 WYKSRRSARSLCQRW 655
           W+ S RSAR + Q W
Sbjct: 573 WHPSDRSARLMLQPW 587


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +2

Query: 542 DCCYPCRSSRVCXHVCAAGDSRN 610
           D C  CR+  +C  V +AG+S++
Sbjct: 61  DAC--CRTHDMCPDVMSAGESKH 81


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 11/46 (23%), Positives = 20/46 (43%)
 Frame = +2

Query: 86  KNIIEMFPTVCRVGRLATKTVVNNATEKASLVTGAAVNKRDYAAKA 223
           +N++     VC++        + +ATE A    G  +  R  A +A
Sbjct: 764 RNVLVNAALVCKIADFGLSREIESATEGAYTTRGGKIPVRWTAPEA 809


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +1

Query: 442 GSPIRIPVGAETLGRIINVIGERL 513
           G P++I +G  +   +  VIG R+
Sbjct: 505 GEPVKITIGIHSGEVVTGVIGHRM 528


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = +1

Query: 427 PVLDSGSPIRIPVGAETLGRIINVIGERLTSAVPSQP 537
           P+L       +PV       I++ + E+L+S+ P QP
Sbjct: 786 PILPMIPVYCVPVPQVNDSTILSPVREKLSSSQPMQP 822


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +1

Query: 442 GSPIRIPVGAETLGRIINVIGERL 513
           G P++I +G  +   +  VIG R+
Sbjct: 505 GEPVKITIGIHSGEVVTGVIGHRM 528


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 397 DGTEGLVRGQPVLDSGSPI 453
           DGTEG+ +   VL    PI
Sbjct: 193 DGTEGIAKSGDVLVETEPI 211


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +1

Query: 442 GSPIRIPVGAETLGRIINVIGERL 513
           G PIR+ +G  T   +  V+G+++
Sbjct: 578 GKPIRMRIGIHTGMVLAGVVGKKM 601


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,950
Number of Sequences: 438
Number of extensions: 3882
Number of successful extensions: 15
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20464920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)