Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30863
(723 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X98330-1|CAA66975.1| 4967|Homo sapiens ryanodine receptor 2 prot... 30 7.3
AL513130-1|CAI15936.1| 4965|Homo sapiens ryanodine receptor 2 (c... 30 7.3
AL445473-1|CAH71393.1| 4965|Homo sapiens ryanodine receptor 2 (c... 30 7.3
AL442065-1|CAI15350.1| 4965|Homo sapiens ryanodine receptor 2 (c... 30 7.3
AL391809-1|CAI14440.1| 4965|Homo sapiens ryanodine receptor 2 (c... 30 7.3
AL365332-1|CAH71369.1| 4965|Homo sapiens ryanodine receptor 2 (c... 30 7.3
AL359924-1|CAI22065.1| 4965|Homo sapiens ryanodine receptor 2 (c... 30 7.3
AL356773-1|CAH73918.1| 4965|Homo sapiens ryanodine receptor 2 (c... 30 7.3
AJ300340-1|CAC18855.1| 4967|Homo sapiens ryanodine receptor 2 pr... 30 7.3
>X98330-1|CAA66975.1| 4967|Homo sapiens ryanodine receptor 2 protein.
Length = 4967
Score = 30.3 bits (65), Expect = 7.3
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = -2
Query: 485 KKKLMLIFVINALLIIIEEHSSHIGMLHFISVEHNQIKSQNNWHARVSVAKR 330
+K + + I +L +E+ S +G H+ VEH Q + WH +S ++
Sbjct: 3545 EKTVERVLDIANVLFHLEQKSKRVGRRHYCLVEHPQRSKKAVWHKLLSKQRK 3596
>AL513130-1|CAI15936.1| 4965|Homo sapiens ryanodine receptor 2
(cardiac) protein.
Length = 4965
Score = 30.3 bits (65), Expect = 7.3
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = -2
Query: 485 KKKLMLIFVINALLIIIEEHSSHIGMLHFISVEHNQIKSQNNWHARVSVAKR 330
+K + + I +L +E+ S +G H+ VEH Q + WH +S ++
Sbjct: 3543 EKTVERVLDIANVLFHLEQKSKRVGRRHYCLVEHPQRSKKAVWHKLLSKQRK 3594
>AL445473-1|CAH71393.1| 4965|Homo sapiens ryanodine receptor 2
(cardiac) protein.
Length = 4965
Score = 30.3 bits (65), Expect = 7.3
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = -2
Query: 485 KKKLMLIFVINALLIIIEEHSSHIGMLHFISVEHNQIKSQNNWHARVSVAKR 330
+K + + I +L +E+ S +G H+ VEH Q + WH +S ++
Sbjct: 3543 EKTVERVLDIANVLFHLEQKSKRVGRRHYCLVEHPQRSKKAVWHKLLSKQRK 3594
>AL442065-1|CAI15350.1| 4965|Homo sapiens ryanodine receptor 2
(cardiac) protein.
Length = 4965
Score = 30.3 bits (65), Expect = 7.3
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = -2
Query: 485 KKKLMLIFVINALLIIIEEHSSHIGMLHFISVEHNQIKSQNNWHARVSVAKR 330
+K + + I +L +E+ S +G H+ VEH Q + WH +S ++
Sbjct: 3543 EKTVERVLDIANVLFHLEQKSKRVGRRHYCLVEHPQRSKKAVWHKLLSKQRK 3594
>AL391809-1|CAI14440.1| 4965|Homo sapiens ryanodine receptor 2
(cardiac) protein.
Length = 4965
Score = 30.3 bits (65), Expect = 7.3
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = -2
Query: 485 KKKLMLIFVINALLIIIEEHSSHIGMLHFISVEHNQIKSQNNWHARVSVAKR 330
+K + + I +L +E+ S +G H+ VEH Q + WH +S ++
Sbjct: 3543 EKTVERVLDIANVLFHLEQKSKRVGRRHYCLVEHPQRSKKAVWHKLLSKQRK 3594
>AL365332-1|CAH71369.1| 4965|Homo sapiens ryanodine receptor 2
(cardiac) protein.
Length = 4965
Score = 30.3 bits (65), Expect = 7.3
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = -2
Query: 485 KKKLMLIFVINALLIIIEEHSSHIGMLHFISVEHNQIKSQNNWHARVSVAKR 330
+K + + I +L +E+ S +G H+ VEH Q + WH +S ++
Sbjct: 3543 EKTVERVLDIANVLFHLEQKSKRVGRRHYCLVEHPQRSKKAVWHKLLSKQRK 3594
>AL359924-1|CAI22065.1| 4965|Homo sapiens ryanodine receptor 2
(cardiac) protein.
Length = 4965
Score = 30.3 bits (65), Expect = 7.3
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = -2
Query: 485 KKKLMLIFVINALLIIIEEHSSHIGMLHFISVEHNQIKSQNNWHARVSVAKR 330
+K + + I +L +E+ S +G H+ VEH Q + WH +S ++
Sbjct: 3543 EKTVERVLDIANVLFHLEQKSKRVGRRHYCLVEHPQRSKKAVWHKLLSKQRK 3594
>AL356773-1|CAH73918.1| 4965|Homo sapiens ryanodine receptor 2
(cardiac) protein.
Length = 4965
Score = 30.3 bits (65), Expect = 7.3
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = -2
Query: 485 KKKLMLIFVINALLIIIEEHSSHIGMLHFISVEHNQIKSQNNWHARVSVAKR 330
+K + + I +L +E+ S +G H+ VEH Q + WH +S ++
Sbjct: 3543 EKTVERVLDIANVLFHLEQKSKRVGRRHYCLVEHPQRSKKAVWHKLLSKQRK 3594
>AJ300340-1|CAC18855.1| 4967|Homo sapiens ryanodine receptor 2
protein.
Length = 4967
Score = 30.3 bits (65), Expect = 7.3
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = -2
Query: 485 KKKLMLIFVINALLIIIEEHSSHIGMLHFISVEHNQIKSQNNWHARVSVAKR 330
+K + + I +L +E+ S +G H+ VEH Q + WH +S ++
Sbjct: 3545 EKTVERVLDIANVLFHLEQKSKRVGRRHYCLVEHPQRSKKAVWHKLLSKQRK 3596
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,167,833
Number of Sequences: 237096
Number of extensions: 1815967
Number of successful extensions: 2804
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2711
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2804
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8511181328
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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