Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30860
         (309 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    23   0.97 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   0.97 
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   0.97 
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    21   3.0  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   3.9  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    20   5.2  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    19   9.0  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    19   9.0  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    19   9.0  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    19   9.0  

>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 22.6 bits (46), Expect = 0.97
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = +1

Query: 124 RHQYCQSWILQVARQRQTPQTTCHSKS 204
           RH   ++W+    R + TPQ+   S++
Sbjct: 237 RHLERKAWVASFGRPKMTPQSLLPSQT 263


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 0.97
 Identities = 7/19 (36%), Positives = 15/19 (78%)
 Frame = -2

Query: 86  SSVQRLMSKAYLSSKLDRN 30
           S +++ +++AY + K+DRN
Sbjct: 88  SQIKKNVTRAYCNKKIDRN 106


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 0.97
 Identities = 7/19 (36%), Positives = 15/19 (78%)
 Frame = -2

Query: 86  SSVQRLMSKAYLSSKLDRN 30
           S +++ +++AY + K+DRN
Sbjct: 88  SQIKKNVTRAYCNKKIDRN 106


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 21.0 bits (42), Expect = 3.0
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +1

Query: 64  DISL*TDEAEVCICSRWQGPRHQYCQ 141
           D+S    E + CI  + Q  R QYC+
Sbjct: 117 DLSYACREEKNCIIDKRQRNRCQYCR 142


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 20.6 bits (41), Expect = 3.9
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -1

Query: 195 MTGCLGSLPLPSNL*YPALTILMTGTL 115
           MTG    +P  S + Y    ILM GT+
Sbjct: 271 MTGTKTVMPSQSAIKYRKQVILMLGTV 297


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory
          receptor candidate 36 protein.
          Length = 355

 Score = 20.2 bits (40), Expect = 5.2
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +2

Query: 62 WTLVSEQTRLK 94
          WT++S  TR+K
Sbjct: 54 WTVISASTRIK 64


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 19.4 bits (38), Expect = 9.0
 Identities = 6/8 (75%), Positives = 6/8 (75%)
 Frame = -2

Query: 173 CLCLATCS 150
           C CL TCS
Sbjct: 190 CCCLRTCS 197


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory
          receptor candidate 52 protein.
          Length = 360

 Score = 19.4 bits (38), Expect = 9.0
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +2

Query: 14 FRKNKNFCP 40
          FRKN+  CP
Sbjct: 22 FRKNRTTCP 30


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory
          receptor candidate 32 protein.
          Length = 651

 Score = 19.4 bits (38), Expect = 9.0
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +2

Query: 14 FRKNKNFCP 40
          FRKN+  CP
Sbjct: 22 FRKNRTTCP 30


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 19.4 bits (38), Expect = 9.0
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = -1

Query: 150 YPALTILMTGTLPSGADAYFSLVCSE 73
           Y  +T +MTG L +        VC++
Sbjct: 172 YKTVTYVMTGQLKAQNSNLLKSVCAD 197


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,186
Number of Sequences: 336
Number of extensions: 1135
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5624413
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)