Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30860
         (309 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U14968-1|AAA85656.1|  148|Homo sapiens ribosomal protein L27a pr...    76   2e-14
BC020169-1|AAH20169.1|  147|Homo sapiens Unknown (protein for IM...    76   2e-14
BC005326-1|AAH05326.1|  148|Homo sapiens ribosomal protein L27a ...    76   2e-14
AB020236-1|BAA77361.1|  148|Homo sapiens ribosomal protein L27A ...    76   2e-14
BC066326-1|AAH66326.1|  148|Homo sapiens ribosomal protein L27a ...    70   2e-12
AJ400879-2|CAC35388.1|  106|Homo sapiens ribosomal protein L27a ...    65   5e-11
AB007178-1|BAA25837.1|   34|Homo sapiens ribosomal protein L27a ...    46   3e-05

>U14968-1|AAA85656.1|  148|Homo sapiens ribosomal protein L27a
           protein.
          Length = 148

 Score = 75.8 bits (178), Expect = 2e-14
 Identities = 34/84 (40%), Positives = 48/84 (57%)
 Frame = +2

Query: 2   RNFHFRKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXP 181
           +++H ++N++FCP +NLDKLWTLVSEQTR+  A    G  P+I++V++           P
Sbjct: 59  KHYHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLP 118

Query: 182 KQPVIVXXXXXXXXXXXXXXDVGG 253
           KQPVIV               VGG
Sbjct: 119 KQPVIVKAKFFSRRAEEKIKSVGG 142


>BC020169-1|AAH20169.1|  147|Homo sapiens Unknown (protein for
           IMAGE:3543815) protein.
          Length = 147

 Score = 75.8 bits (178), Expect = 2e-14
 Identities = 34/84 (40%), Positives = 48/84 (57%)
 Frame = +2

Query: 2   RNFHFRKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXP 181
           +++H ++N++FCP +NLDKLWTLVSEQTR+  A    G  P+I++V++           P
Sbjct: 58  KHYHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLP 117

Query: 182 KQPVIVXXXXXXXXXXXXXXDVGG 253
           KQPVIV               VGG
Sbjct: 118 KQPVIVKAKFFSRRAEEKIKSVGG 141


>BC005326-1|AAH05326.1|  148|Homo sapiens ribosomal protein L27a
           protein.
          Length = 148

 Score = 75.8 bits (178), Expect = 2e-14
 Identities = 34/84 (40%), Positives = 48/84 (57%)
 Frame = +2

Query: 2   RNFHFRKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXP 181
           +++H ++N++FCP +NLDKLWTLVSEQTR+  A    G  P+I++V++           P
Sbjct: 59  KHYHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLP 118

Query: 182 KQPVIVXXXXXXXXXXXXXXDVGG 253
           KQPVIV               VGG
Sbjct: 119 KQPVIVKAKFFSRRAEEKIKSVGG 142


>AB020236-1|BAA77361.1|  148|Homo sapiens ribosomal protein L27A
           protein.
          Length = 148

 Score = 75.8 bits (178), Expect = 2e-14
 Identities = 34/84 (40%), Positives = 48/84 (57%)
 Frame = +2

Query: 2   RNFHFRKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXP 181
           +++H ++N++FCP +NLDKLWTLVSEQTR+  A    G  P+I++V++           P
Sbjct: 59  KHYHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLP 118

Query: 182 KQPVIVXXXXXXXXXXXXXXDVGG 253
           KQPVIV               VGG
Sbjct: 119 KQPVIVKAKFFSRRAEEKIKSVGG 142


>BC066326-1|AAH66326.1|  148|Homo sapiens ribosomal protein L27a
           protein.
          Length = 148

 Score = 69.7 bits (163), Expect = 2e-12
 Identities = 32/84 (38%), Positives = 47/84 (55%)
 Frame = +2

Query: 2   RNFHFRKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXP 181
           ++++ ++N++FCP +NLDKLWTLVSEQTR+  A    G  P+I++V++            
Sbjct: 59  KHYNLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLA 118

Query: 182 KQPVIVXXXXXXXXXXXXXXDVGG 253
           KQPVIV               VGG
Sbjct: 119 KQPVIVKAKLFSRRAEEKIKSVGG 142


>AJ400879-2|CAC35388.1|  106|Homo sapiens ribosomal protein L27a
           protein.
          Length = 106

 Score = 64.9 bits (151), Expect = 5e-11
 Identities = 24/48 (50%), Positives = 38/48 (79%)
 Frame = +2

Query: 2   RNFHFRKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKA 145
           +++H ++N++FCP +NLDKLWTLVSEQTR+  A    G  P+I++V++
Sbjct: 59  KHYHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRS 106


>AB007178-1|BAA25837.1|   34|Homo sapiens ribosomal protein L27a
           protein.
          Length = 34

 Score = 45.6 bits (103), Expect = 3e-05
 Identities = 19/34 (55%), Positives = 26/34 (76%)
 Frame = +2

Query: 44  LNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKA 145
           +NLDKLWTLVSEQTR+  A    G  P+I++V++
Sbjct: 1   VNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRS 34


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,750,213
Number of Sequences: 237096
Number of extensions: 671281
Number of successful extensions: 1928
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1903
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1928
length of database: 76,859,062
effective HSP length: 78
effective length of database: 58,365,574
effective search space used: 1400773776
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)