Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30860
(309 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor pro... 23 0.64
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 23 1.1
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 22 1.5
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 22 1.5
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 22 1.5
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 22 1.5
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 22 1.5
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 22 1.5
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 22 1.5
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 22 1.5
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 22 1.9
AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein... 21 2.6
AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein... 21 2.6
DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly pro... 21 4.5
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 21 4.5
S76956-1|AAB33931.1| 168|Apis mellifera olfactory receptor prot... 20 7.8
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 20 7.8
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 20 7.8
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 20 7.8
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 20 7.8
DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein. 20 7.8
>DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor
protein.
Length = 405
Score = 23.4 bits (48), Expect = 0.64
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +1
Query: 79 TDEAEVCICSRWQGPRHQYCQSWILQVARQRQTPQT 186
+DEAE S+ G + QS I +VAR+ +T T
Sbjct: 272 SDEAEPSSTSKKSGIVRSHQQSCINRVARETKTAGT 307
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 22.6 bits (46), Expect = 1.1
Identities = 8/27 (29%), Positives = 15/27 (55%)
Frame = +1
Query: 124 RHQYCQSWILQVARQRQTPQTTCHSKS 204
RH ++W+ R + TPQ+ S++
Sbjct: 241 RHLERKAWVASFGRPKMTPQSLLPSQT 267
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 1.5
Identities = 9/32 (28%), Positives = 20/32 (62%)
Frame = +1
Query: 79 TDEAEVCICSRWQGPRHQYCQSWILQVARQRQ 174
++++E + SR Q R + + W++Q R+R+
Sbjct: 20 SEDSETGLRSRTQEERLRRRREWMIQQERERE 51
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 1.5
Identities = 9/32 (28%), Positives = 20/32 (62%)
Frame = +1
Query: 79 TDEAEVCICSRWQGPRHQYCQSWILQVARQRQ 174
++++E + SR Q R + + W++Q R+R+
Sbjct: 20 SEDSETGLRSRTQEERLRRRREWMIQQERERE 51
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 1.5
Identities = 9/32 (28%), Positives = 20/32 (62%)
Frame = +1
Query: 79 TDEAEVCICSRWQGPRHQYCQSWILQVARQRQ 174
++++E + SR Q R + + W++Q R+R+
Sbjct: 20 SEDSETGLRSRTQEERLRRRREWMIQQERERE 51
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 1.5
Identities = 9/32 (28%), Positives = 20/32 (62%)
Frame = +1
Query: 79 TDEAEVCICSRWQGPRHQYCQSWILQVARQRQ 174
++++E + SR Q R + + W++Q R+R+
Sbjct: 20 SEDSETGLRSRTQEERLRRRREWMIQQERERE 51
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 1.5
Identities = 9/32 (28%), Positives = 20/32 (62%)
Frame = +1
Query: 79 TDEAEVCICSRWQGPRHQYCQSWILQVARQRQ 174
++++E + SR Q R + + W++Q R+R+
Sbjct: 20 SEDSETGLRSRTQEERLRRRREWMIQQERERE 51
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 1.5
Identities = 9/32 (28%), Positives = 20/32 (62%)
Frame = +1
Query: 79 TDEAEVCICSRWQGPRHQYCQSWILQVARQRQ 174
++++E + SR Q R + + W++Q R+R+
Sbjct: 20 SEDSETGLRSRTQEERLRRRREWMIQQERERE 51
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 22.2 bits (45), Expect = 1.5
Identities = 9/32 (28%), Positives = 20/32 (62%)
Frame = +1
Query: 79 TDEAEVCICSRWQGPRHQYCQSWILQVARQRQ 174
++++E + SR Q R + + W++Q R+R+
Sbjct: 20 SEDSETGLRSRTQEERLRRRREWMIQQERERE 51
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 22.2 bits (45), Expect = 1.5
Identities = 9/32 (28%), Positives = 20/32 (62%)
Frame = +1
Query: 79 TDEAEVCICSRWQGPRHQYCQSWILQVARQRQ 174
++++E + SR Q R + + W++Q R+R+
Sbjct: 20 SEDSETGLRSRTQEERLRRRREWMIQQERERE 51
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 21.8 bits (44), Expect = 1.9
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +2
Query: 71 VSEQTRLKYASAPDGKVPVI 130
V EQT A D KVP+I
Sbjct: 230 VKEQTLQSIEMAKDAKVPII 249
>AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 21.4 bits (43), Expect = 2.6
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1
Query: 64 DISL*TDEAEVCICSRWQGPRHQYCQ 141
D+S E + CI + Q R QYC+
Sbjct: 141 DLSYACREEKSCIIDKRQRNRCQYCR 166
>AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 21.4 bits (43), Expect = 2.6
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1
Query: 64 DISL*TDEAEVCICSRWQGPRHQYCQ 141
D+S E + CI + Q R QYC+
Sbjct: 141 DLSYACREEKSCIIDKRQRNRCQYCR 166
>DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly
protein 9 protein.
Length = 423
Score = 20.6 bits (41), Expect = 4.5
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = -1
Query: 96 YFSLVCSETNVQSLSKFK 43
YFS+VC SL FK
Sbjct: 11 YFSIVCQAKAHYSLRDFK 28
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 20.6 bits (41), Expect = 4.5
Identities = 12/52 (23%), Positives = 23/52 (44%)
Frame = +1
Query: 115 QGPRHQYCQSWILQVARQRQTPQTTCHSKSKVLLKISREENQGCGWCCVLSA 270
+GPR YC W + + + P ++ + +S E +G G ++A
Sbjct: 567 KGPRTTYCAFWNEFLPKLKGIPDPXPNTCKVIASSVSAGE-EGLGNSLAITA 617
>S76956-1|AAB33931.1| 168|Apis mellifera olfactory receptor
protein.
Length = 168
Score = 19.8 bits (39), Expect = 7.8
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -1
Query: 90 SLVCSETNVQSLSKF 46
SLVC++T + L+ F
Sbjct: 65 SLVCADTRLNKLAVF 79
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 19.8 bits (39), Expect = 7.8
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -1
Query: 210 NFAFTMTGCLGSLPLPSNL 154
NF T G +LP+ SNL
Sbjct: 342 NFFTTSNGFRSTLPVVSNL 360
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 19.8 bits (39), Expect = 7.8
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -1
Query: 210 NFAFTMTGCLGSLPLPSNL 154
NF T G +LP+ SNL
Sbjct: 311 NFFTTSNGFRSTLPVVSNL 329
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 19.8 bits (39), Expect = 7.8
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -1
Query: 210 NFAFTMTGCLGSLPLPSNL 154
NF T G +LP+ SNL
Sbjct: 362 NFFTTSNGFRSTLPVVSNL 380
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 19.8 bits (39), Expect = 7.8
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -1
Query: 210 NFAFTMTGCLGSLPLPSNL 154
NF T G +LP+ SNL
Sbjct: 311 NFFTTSNGFRSTLPVVSNL 329
>DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein.
Length = 552
Score = 19.8 bits (39), Expect = 7.8
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = -1
Query: 261 YTTPPTSLIFFSADFEKNFAFTMTG 187
Y + P S +FS FEK + G
Sbjct: 91 YGSTPDSRDYFSRPFEKRLHSRLPG 115
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,500
Number of Sequences: 438
Number of extensions: 1222
Number of successful extensions: 23
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used: 6471036
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
- SilkBase 1999-2023 -