Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30859
(435 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P49630 Cluster: 60S ribosomal protein L36 (Protein minu... 87 1e-16
UniRef50_Q1G198 Cluster: 60S ribosomal protein L36; n=1; Leptino... 68 8e-11
UniRef50_Q9Y3U8 Cluster: 60S ribosomal protein L36; n=47; Eutele... 67 1e-10
UniRef50_A7ATP0 Cluster: 60S ribosomal protein L36; n=3; Piropla... 58 1e-07
UniRef50_P49181 Cluster: 60S ribosomal protein L36; n=18; Fungi/... 58 1e-07
UniRef50_Q9BYF3 Cluster: 60S ribosomal protein L36; n=5; Amniota... 57 2e-07
UniRef50_UPI00005A004D Cluster: PREDICTED: similar to ribosomal ... 56 3e-07
UniRef50_O80929 Cluster: 60S ribosomal protein L36-1; n=18; Euka... 56 4e-07
UniRef50_Q7XY66 Cluster: Putative 60S ribosomal protein L36; n=1... 53 2e-06
UniRef50_A2ZZF6 Cluster: 60S ribosomal protein L36; n=9; Eukaryo... 52 5e-06
UniRef50_UPI0000EBDDF6 Cluster: PREDICTED: similar to rat riboso... 51 9e-06
UniRef50_Q92365 Cluster: 60S ribosomal protein L36-A; n=2; Schiz... 48 1e-04
UniRef50_A1BQ89 Cluster: 60S ribosomal protein L36; n=1; Strongy... 47 2e-04
UniRef50_UPI0000604754 Cluster: PREDICTED: similar to rat riboso... 47 2e-04
UniRef50_Q5KEE1 Cluster: 60S ribosomal protein L36; n=2; Dikarya... 46 3e-04
UniRef50_P52866 Cluster: 60S ribosomal protein L36; n=13; Eukary... 46 3e-04
UniRef50_Q8S8Z4 Cluster: 60S ribosomal protein L36 homolog; n=1;... 43 0.002
UniRef50_A0DT55 Cluster: 60S ribosomal protein L36; n=5; Oligohy... 42 0.007
UniRef50_Q7R9S3 Cluster: 60S ribosomal protein L36; n=2; Plasmod... 41 0.010
UniRef50_Q8I713 Cluster: 60S Ribosomal protein L36, putative; n=... 41 0.013
UniRef50_P05745 Cluster: 60S ribosomal protein L36-A; n=26; Fung... 41 0.013
UniRef50_Q38CY6 Cluster: 60S ribosomal protein L36; n=2; Trypano... 39 0.053
UniRef50_Q16KP4 Cluster: 60S ribosomal protein L36; n=1; Aedes a... 39 0.053
UniRef50_Q4QCE1 Cluster: 60S ribosomal protein l36, putative; n=... 36 0.28
UniRef50_UPI00015538C3 Cluster: PREDICTED: similar to 60S riboso... 36 0.37
UniRef50_Q9U919 Cluster: PTGT-4 protein; n=1; Trypanosoma brucei... 35 0.86
UniRef50_Q7QRE6 Cluster: 60S ribosomal protein L36; n=1; Giardia... 35 0.86
UniRef50_Q55AQ9 Cluster: 60S ribosomal protein L36; n=2; Dictyos... 35 0.86
UniRef50_A7TBW5 Cluster: Predicted protein; n=1; Nematostella ve... 35 0.86
UniRef50_A2F3E0 Cluster: Ribosomal protein L36e, putative; n=4; ... 31 8.0
>UniRef50_P49630 Cluster: 60S ribosomal protein L36 (Protein
minute(1)1B); n=18; Coelomata|Rep: 60S ribosomal protein
L36 (Protein minute(1)1B) - Drosophila melanogaster
(Fruit fly)
Length = 115
Score = 87.4 bits (207), Expect = 1e-16
Identities = 43/70 (61%), Positives = 55/70 (78%), Gaps = 1/70 (1%)
Frame = +1
Query: 34 MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIR-IRPARLKGLQTKHSKFVRDLVREVVG 210
MA R+E+A+GL KGHKT+KI K DK ++ +R +RLK +QT+H+KF+RDLVREVVG
Sbjct: 1 MAVRYELAIGLNKGHKTSKIR-NVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVG 59
Query: 211 HAQYEKRAME 240
HA YEKR ME
Sbjct: 60 HAPYEKRTME 69
Score = 69.7 bits (163), Expect = 2e-11
Identities = 32/35 (91%), Positives = 34/35 (97%)
Frame = +3
Query: 255 KDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 359
KDKRALKFLKRRLGTHIRAKRKREELSN+L Q+RK
Sbjct: 75 KDKRALKFLKRRLGTHIRAKRKREELSNILTQLRK 109
>UniRef50_Q1G198 Cluster: 60S ribosomal protein L36; n=1;
Leptinotarsa decemlineata|Rep: 60S ribosomal protein L36
- Leptinotarsa decemlineata (Colorado potato beetle)
Length = 84
Score = 68.1 bits (159), Expect = 8e-11
Identities = 32/35 (91%), Positives = 33/35 (94%)
Frame = +3
Query: 255 KDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 359
KDKRALKFLKRRLGTHIRAKRKREELSN+L QM K
Sbjct: 45 KDKRALKFLKRRLGTHIRAKRKREELSNILTQMGK 79
Score = 58.4 bits (135), Expect = 6e-08
Identities = 25/37 (67%), Positives = 29/37 (78%)
Frame = +1
Query: 130 RIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAME 240
R P RLKG+QTKH+KFVRD++REVVGH EKR E
Sbjct: 3 RFEPERLKGIQTKHTKFVRDIIREVVGHXPXEKRXXE 39
>UniRef50_Q9Y3U8 Cluster: 60S ribosomal protein L36; n=47;
Euteleostomi|Rep: 60S ribosomal protein L36 - Homo
sapiens (Human)
Length = 105
Score = 67.3 bits (157), Expect = 1e-10
Identities = 31/35 (88%), Positives = 34/35 (97%)
Frame = +3
Query: 255 KDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 359
KDKRALKF+K+R+GTHIRAKRKREELSNVLA MRK
Sbjct: 65 KDKRALKFIKKRVGTHIRAKRKREELSNVLAAMRK 99
Score = 64.1 bits (149), Expect = 1e-09
Identities = 35/69 (50%), Positives = 44/69 (63%)
Frame = +1
Query: 34 MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGH 213
MA R+ +AVGL KGHK TK + R +R +G TKH+KFVRD++REV G
Sbjct: 1 MALRYPMAVGLNKGHKVTK----------NVSKPRHSRRRGRLTKHTKFVRDMIREVCGF 50
Query: 214 AQYEKRAME 240
A YE+RAME
Sbjct: 51 APYERRAME 59
>UniRef50_A7ATP0 Cluster: 60S ribosomal protein L36; n=3;
Piroplasmida|Rep: 60S ribosomal protein L36 - Babesia
bovis
Length = 116
Score = 57.6 bits (133), Expect = 1e-07
Identities = 32/73 (43%), Positives = 44/73 (60%)
Frame = +1
Query: 22 QSEIMAPRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVRE 201
+ +I APR IAVGL KGH TT I + +RP+R KGL+TK + V +++RE
Sbjct: 6 EMKIEAPRSGIAVGLNKGHITTPIPLVKS--------VRPSRKKGLKTKRNALVSEVIRE 57
Query: 202 VVGHAQYEKRAME 240
V G A YE+ +E
Sbjct: 58 VCGFAPYERHMIE 70
Score = 39.1 bits (87), Expect = 0.040
Identities = 19/33 (57%), Positives = 23/33 (69%)
Frame = +3
Query: 261 KRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 359
KRALKF K+RLGT RAK K +E+ V+ RK
Sbjct: 81 KRALKFAKKRLGTLRRAKTKNDEMMRVVELQRK 113
>UniRef50_P49181 Cluster: 60S ribosomal protein L36; n=18;
Fungi/Metazoa group|Rep: 60S ribosomal protein L36 -
Caenorhabditis elegans
Length = 104
Score = 57.6 bits (133), Expect = 1e-07
Identities = 27/35 (77%), Positives = 29/35 (82%)
Frame = +3
Query: 255 KDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 359
KDKRALKFLKRR+GTH RAK KREEL NV+ RK
Sbjct: 67 KDKRALKFLKRRIGTHRRAKGKREELQNVIIAQRK 101
Score = 48.4 bits (110), Expect = 7e-05
Identities = 26/63 (41%), Positives = 38/63 (60%)
Frame = +1
Query: 52 IAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKR 231
+AVGL KGH T++ ++ R R KG+ +K +K VR+LVRE+ G A YE+R
Sbjct: 9 LAVGLNKGHAATQLP----------VKQRQNRHKGVASKKTKIVRELVREITGFAPYERR 58
Query: 232 AME 240
+E
Sbjct: 59 VLE 61
>UniRef50_Q9BYF3 Cluster: 60S ribosomal protein L36; n=5;
Amniota|Rep: 60S ribosomal protein L36 - Homo sapiens
(Human)
Length = 32
Score = 56.8 bits (131), Expect = 2e-07
Identities = 25/28 (89%), Positives = 28/28 (100%)
Frame = +3
Query: 255 KDKRALKFLKRRLGTHIRAKRKREELSN 338
KDKRALKF+K+R+GTHIRAKRKREELSN
Sbjct: 5 KDKRALKFIKKRVGTHIRAKRKREELSN 32
>UniRef50_UPI00005A004D Cluster: PREDICTED: similar to ribosomal
protein L36; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L36 - Canis familiaris
Length = 107
Score = 56.0 bits (129), Expect = 3e-07
Identities = 24/35 (68%), Positives = 31/35 (88%)
Frame = +3
Query: 255 KDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 359
KDKR L+ +K+R+GTH+RAKR+ EELSNVLA +RK
Sbjct: 67 KDKRTLRLIKKRVGTHVRAKRETEELSNVLAAIRK 101
>UniRef50_O80929 Cluster: 60S ribosomal protein L36-1; n=18;
Eukaryota|Rep: 60S ribosomal protein L36-1 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 113
Score = 55.6 bits (128), Expect = 4e-07
Identities = 26/34 (76%), Positives = 30/34 (88%)
Frame = +3
Query: 255 KDKRALKFLKRRLGTHIRAKRKREELSNVLAQMR 356
KDKRALK KR+LGTH RAKRKREE+S+VL +MR
Sbjct: 68 KDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMR 101
Score = 41.5 bits (93), Expect = 0.007
Identities = 25/61 (40%), Positives = 32/61 (52%)
Frame = +1
Query: 58 VGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAM 237
VGL KGH T+ + + RP KG +K + F+R L+REV G A YEKR
Sbjct: 12 VGLNKGHVVTR----------RELAPRPNSRKGKTSKRTIFIRKLIREVAGMAPYEKRIT 61
Query: 238 E 240
E
Sbjct: 62 E 62
>UniRef50_Q7XY66 Cluster: Putative 60S ribosomal protein L36; n=1;
Griffithsia japonica|Rep: Putative 60S ribosomal protein
L36 - Griffithsia japonica (Red alga)
Length = 94
Score = 53.2 bits (122), Expect = 2e-06
Identities = 23/34 (67%), Positives = 28/34 (82%)
Frame = +3
Query: 255 KDKRALKFLKRRLGTHIRAKRKREELSNVLAQMR 356
KDKRALKF K+RLGTH+RAKRKRE+++ L R
Sbjct: 60 KDKRALKFAKKRLGTHLRAKRKREQMAEALRSKR 93
>UniRef50_A2ZZF6 Cluster: 60S ribosomal protein L36; n=9;
Eukaryota|Rep: 60S ribosomal protein L36 - Oryza sativa
subsp. japonica (Rice)
Length = 143
Score = 52.0 bits (119), Expect = 5e-06
Identities = 23/34 (67%), Positives = 29/34 (85%)
Frame = +3
Query: 255 KDKRALKFLKRRLGTHIRAKRKREELSNVLAQMR 356
KDKRALK KR+LGTH RAK+KREE++ V+ +MR
Sbjct: 68 KDKRALKVAKRKLGTHKRAKKKREEMAGVIRKMR 101
Score = 48.8 bits (111), Expect = 5e-05
Identities = 29/67 (43%), Positives = 36/67 (53%)
Frame = +1
Query: 40 PRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQ 219
P+ + VG+ KGH TK + + RP+ KG TK FVR L+REVVG A
Sbjct: 6 PKSGLFVGINKGHVVTK----------RELPPRPSDRKGKSTKRVNFVRGLIREVVGFAP 55
Query: 220 YEKRAME 240
YEKR E
Sbjct: 56 YEKRITE 62
>UniRef50_UPI0000EBDDF6 Cluster: PREDICTED: similar to rat ribosomal
protein L36; n=1; Bos taurus|Rep: PREDICTED: similar to
rat ribosomal protein L36 - Bos taurus
Length = 131
Score = 51.2 bits (117), Expect = 9e-06
Identities = 24/35 (68%), Positives = 29/35 (82%)
Frame = +3
Query: 255 KDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 359
KDK+ALKF+++ LGTHI AKRK ELSNVLA R+
Sbjct: 71 KDKQALKFIQKMLGTHICAKRKARELSNVLATTRE 105
>UniRef50_Q92365 Cluster: 60S ribosomal protein L36-A; n=2;
Schizosaccharomyces pombe|Rep: 60S ribosomal protein
L36-A - Schizosaccharomyces pombe (Fission yeast)
Length = 99
Score = 47.6 bits (108), Expect = 1e-04
Identities = 22/45 (48%), Positives = 30/45 (66%)
Frame = +1
Query: 106 KGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAME 240
K +T + + RP+R KG +K + FVR +VREV G A YE+R ME
Sbjct: 13 KVLTKRQLPERPSRRKGQLSKRTSFVRSIVREVAGFAPYERRVME 57
Score = 37.5 bits (83), Expect = 0.12
Identities = 19/34 (55%), Positives = 24/34 (70%)
Frame = +3
Query: 255 KDKRALKFLKRRLGTHIRAKRKREELSNVLAQMR 356
+DKRA K K+RLGT RAK K EEL++V+ R
Sbjct: 63 QDKRARKLAKKRLGTLKRAKGKIEELTSVIQSSR 96
>UniRef50_A1BQ89 Cluster: 60S ribosomal protein L36; n=1;
Strongyloides ratti|Rep: 60S ribosomal protein L36 -
Strongyloides ratti
Length = 91
Score = 47.2 bits (107), Expect = 2e-04
Identities = 27/63 (42%), Positives = 37/63 (58%)
Frame = +1
Query: 52 IAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKR 231
+A+GL KG + TK A ++R R +G TK +K VR+LVRE+ G A YE+R
Sbjct: 10 LAIGLEKGVRVTK----------NARKMRQNRKRGAATKKTKVVRELVREITGFAPYERR 59
Query: 232 AME 240
ME
Sbjct: 60 MME 62
>UniRef50_UPI0000604754 Cluster: PREDICTED: similar to rat ribosomal
protein L36; n=8; Eutheria|Rep: PREDICTED: similar to
rat ribosomal protein L36 - Mus musculus
Length = 105
Score = 46.8 bits (106), Expect = 2e-04
Identities = 22/34 (64%), Positives = 26/34 (76%)
Frame = +3
Query: 258 DKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 359
DK A KF+K+R+G HI KRK EELS V+A MRK
Sbjct: 66 DKCAFKFIKKRVGMHIHTKRKWEELSIVIAAMRK 99
Score = 35.5 bits (78), Expect = 0.49
Identities = 25/64 (39%), Positives = 34/64 (53%)
Frame = +1
Query: 34 MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGH 213
MA +A+GL KGHK K + K + P RL TKH+KFV+D++REV
Sbjct: 1 MALHCPMAMGLDKGHKVMKNISKPKHSS-------PHRLL---TKHTKFVQDMIREVCDF 50
Query: 214 AQYE 225
Y+
Sbjct: 51 MSYD 54
>UniRef50_Q5KEE1 Cluster: 60S ribosomal protein L36; n=2;
Dikarya|Rep: 60S ribosomal protein L36 - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 197
Score = 46.4 bits (105), Expect = 3e-04
Identities = 28/72 (38%), Positives = 36/72 (50%)
Frame = +1
Query: 25 SEIMAPRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREV 204
S A R + G+ KG TT I RP+ KGL+T+ FVR ++REV
Sbjct: 93 SSAPAQRSNLRYGMNKGRPTTVIPK----------TARPSNKKGLKTEKKTFVRSVIREV 142
Query: 205 VGHAQYEKRAME 240
G + YEKR ME
Sbjct: 143 AGFSPYEKRVME 154
Score = 44.0 bits (99), Expect = 0.001
Identities = 20/35 (57%), Positives = 27/35 (77%)
Frame = +3
Query: 255 KDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 359
KDK+A K K+RLGT +R+KRK EELS V+ + R+
Sbjct: 160 KDKKAKKLTKKRLGTLLRSKRKIEELSAVIVEQRR 194
>UniRef50_P52866 Cluster: 60S ribosomal protein L36; n=13;
Eukaryota|Rep: 60S ribosomal protein L36 - Daucus carota
(Carrot)
Length = 106
Score = 46.0 bits (104), Expect = 3e-04
Identities = 28/67 (41%), Positives = 35/67 (52%)
Frame = +1
Query: 40 PRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQ 219
P + VGL KGH TK K + RP+ KG +K + FVR+L+REV G
Sbjct: 6 PNTGLFVGLNKGHIVTK----------KELAPRPSDRKGKTSKRTHFVRNLIREVAGFXP 55
Query: 220 YEKRAME 240
YEKR E
Sbjct: 56 YEKRITE 62
>UniRef50_Q8S8Z4 Cluster: 60S ribosomal protein L36 homolog; n=1;
Allium cepa|Rep: 60S ribosomal protein L36 homolog -
Allium cepa (Onion)
Length = 64
Score = 43.2 bits (97), Expect = 0.002
Identities = 21/34 (61%), Positives = 26/34 (76%)
Frame = +3
Query: 255 KDKRALKFLKRRLGTHIRAKRKREELSNVLAQMR 356
K + L+ R+LGTH RAKRKREE+SNVL +MR
Sbjct: 22 KRELPLRPSSRKLGTHKRAKRKREEMSNVLRKMR 55
>UniRef50_A0DT55 Cluster: 60S ribosomal protein L36; n=5;
Oligohymenophorea|Rep: 60S ribosomal protein L36 -
Paramecium tetraurelia
Length = 110
Score = 41.5 bits (93), Expect = 0.007
Identities = 26/66 (39%), Positives = 37/66 (56%)
Frame = +1
Query: 43 RFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQY 222
R IAVGL +G T+ + T K +R RP++ KG K VR +++EV G + Y
Sbjct: 3 RTGIAVGLNRGFITSSL-------TKKQLRRRPSQRKGTLGKRVLSVRKVIQEVAGLSPY 55
Query: 223 EKRAME 240
EKR +E
Sbjct: 56 EKRIIE 61
Score = 31.9 bits (69), Expect = 6.0
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +3
Query: 261 KRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 359
K+A K +RLGT+ R KRK E + N+ MRK
Sbjct: 72 KKAGKLAAKRLGTNRRGKRKIELVQNLYRAMRK 104
>UniRef50_Q7R9S3 Cluster: 60S ribosomal protein L36; n=2;
Plasmodium|Rep: 60S ribosomal protein L36 - Plasmodium
yoelii yoelii
Length = 113
Score = 41.1 bits (92), Expect = 0.010
Identities = 16/33 (48%), Positives = 24/33 (72%)
Frame = +3
Query: 261 KRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 359
KR+LK+ K++LGTH R K KREE+ ++ R+
Sbjct: 74 KRSLKYAKKKLGTHKRGKAKREEIQKIVMMQRR 106
Score = 36.7 bits (81), Expect = 0.21
Identities = 24/67 (35%), Positives = 33/67 (49%)
Frame = +1
Query: 40 PRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQ 219
P IAVG GH TK S +K I K++ K+ + D+VRE+ G +
Sbjct: 9 PSTGIAVGFNSGHIVTKRSV-KKSIKKKSV-----------PKNKDLINDVVREIAGFSP 56
Query: 220 YEKRAME 240
YEKR +E
Sbjct: 57 YEKRLIE 63
>UniRef50_Q8I713 Cluster: 60S Ribosomal protein L36, putative; n=2;
Plasmodium|Rep: 60S Ribosomal protein L36, putative -
Plasmodium falciparum (isolate 3D7)
Length = 130
Score = 40.7 bits (91), Expect = 0.013
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = +3
Query: 261 KRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 359
KR+LK+ K++LGTH R K KREE+ V+ R+
Sbjct: 92 KRSLKYAKKKLGTHKRGKAKREEIQKVVILQRR 124
Score = 31.5 bits (68), Expect = 8.0
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +1
Query: 163 TKHSKFVRDLVREVVGHAQYEKRAME 240
+K + ++D+VRE+ G + YEKR +E
Sbjct: 56 SKRKELIKDVVREITGFSPYEKRIIE 81
>UniRef50_P05745 Cluster: 60S ribosomal protein L36-A; n=26;
Fungi/Metazoa group|Rep: 60S ribosomal protein L36-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 100
Score = 40.7 bits (91), Expect = 0.013
Identities = 26/69 (37%), Positives = 38/69 (55%)
Frame = +1
Query: 34 MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGH 213
M + IA+GL KG K T ++ K I+ K KG + +KFVR LVRE+ G
Sbjct: 1 MTVKTGIAIGLNKGKKVTSMTPAPK-ISYK---------KGAASNRTKFVRSLVREIAGL 50
Query: 214 AQYEKRAME 240
+ YE+R ++
Sbjct: 51 SPYERRLID 59
Score = 38.7 bits (86), Expect = 0.053
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = +3
Query: 258 DKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 359
+KRA K K+RLG+ RAK K EE++N++A R+
Sbjct: 66 EKRARKVAKKRLGSFTRAKAKVEEMNNIIAASRR 99
>UniRef50_Q38CY6 Cluster: 60S ribosomal protein L36; n=2;
Trypanosoma brucei|Rep: 60S ribosomal protein L36 -
Trypanosoma brucei
Length = 109
Score = 38.7 bits (86), Expect = 0.053
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = +3
Query: 255 KDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 359
KDKRALKF K+RLG+ AK++R ++ L Q K
Sbjct: 73 KDKRALKFCKKRLGSIKAAKKRRAKVEEALRQQTK 107
>UniRef50_Q16KP4 Cluster: 60S ribosomal protein L36; n=1; Aedes
aegypti|Rep: 60S ribosomal protein L36 - Aedes aegypti
(Yellowfever mosquito)
Length = 86
Score = 38.7 bits (86), Expect = 0.053
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Frame = +1
Query: 82 TTKISAGRKGITDKAIRIRPARLKG---LQTKHSKFVRDLVREVVGHAQYEKRAME 240
T + G K + I+ R RL +QTK +K VRDL+ EVV HA ++K+ M+
Sbjct: 9 TNRHKLGNKSYKLRQIQYREDRLSRTNEIQTKLTKLVRDLIHEVVVHATFKKKDMQ 64
>UniRef50_Q4QCE1 Cluster: 60S ribosomal protein l36, putative; n=9;
Trypanosomatidae|Rep: 60S ribosomal protein l36,
putative - Leishmania major
Length = 105
Score = 36.3 bits (80), Expect = 0.28
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +3
Query: 255 KDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 359
K+KRALK+ K+RLG AK+KR ++ L K
Sbjct: 68 KEKRALKYCKKRLGDFTAAKKKRSKMEEALRHATK 102
>UniRef50_UPI00015538C3 Cluster: PREDICTED: similar to 60S ribosomal
protein L36; n=1; Mus musculus|Rep: PREDICTED: similar
to 60S ribosomal protein L36 - Mus musculus
Length = 129
Score = 35.9 bits (79), Expect = 0.37
Identities = 17/41 (41%), Positives = 26/41 (63%)
Frame = +1
Query: 118 DKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAME 240
+K ++R ++ G TKH+KF+ + RE+ G A YE RA E
Sbjct: 70 NKGHKVRHSQCHGSLTKHTKFMWGVNREMCGFASYEWRATE 110
>UniRef50_Q9U919 Cluster: PTGT-4 protein; n=1; Trypanosoma
brucei|Rep: PTGT-4 protein - Trypanosoma brucei
Length = 508
Score = 34.7 bits (76), Expect = 0.86
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = -1
Query: 390 NGDGDEPGRLPSSSERARC*VLHASSWRGCVCPIVASRTS 271
+G GD P + P SS + RC L SSWR I +RT+
Sbjct: 99 HGKGDRPSQKPKSSSQKRCRHLSGSSWREPRRTIAPARTA 138
>UniRef50_Q7QRE6 Cluster: 60S ribosomal protein L36; n=1; Giardia
lamblia ATCC 50803|Rep: 60S ribosomal protein L36 -
Giardia lamblia ATCC 50803
Length = 90
Score = 34.7 bits (76), Expect = 0.86
Identities = 15/27 (55%), Positives = 21/27 (77%)
Frame = +3
Query: 255 KDKRALKFLKRRLGTHIRAKRKREELS 335
KD+ AL++ K+RLG RAK KR++LS
Sbjct: 58 KDRHALRYAKKRLGNIKRAKAKRDQLS 84
>UniRef50_Q55AQ9 Cluster: 60S ribosomal protein L36; n=2;
Dictyostelium discoideum|Rep: 60S ribosomal protein L36
- Dictyostelium discoideum AX4
Length = 105
Score = 34.7 bits (76), Expect = 0.86
Identities = 14/28 (50%), Positives = 22/28 (78%)
Frame = +3
Query: 258 DKRALKFLKRRLGTHIRAKRKREELSNV 341
DKRALK K+RLG+ K+KR++++N+
Sbjct: 71 DKRALKVAKKRLGSIQAGKKKRDDIANI 98
>UniRef50_A7TBW5 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 208
Score = 34.7 bits (76), Expect = 0.86
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +1
Query: 34 MAPRFEIAVGLRKGHKTTK 90
MAP+ E+AVGL+KGHK TK
Sbjct: 155 MAPKVEMAVGLQKGHKVTK 173
>UniRef50_A2F3E0 Cluster: Ribosomal protein L36e, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein L36e,
putative - Trichomonas vaginalis G3
Length = 93
Score = 31.5 bits (68), Expect = 8.0
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +3
Query: 261 KRALKFLKRRLGTHIRAKRKREELSNVLAQ 350
+ A +FLK+RLGTH RA +K L V+ +
Sbjct: 56 RAARQFLKKRLGTHRRAMKKLNTLEEVVQE 85
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 361,684,497
Number of Sequences: 1657284
Number of extensions: 5917452
Number of successful extensions: 14766
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 14569
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14759
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 21496989549
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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