Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30858
         (406 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   0.37 
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    24   0.49 
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    24   0.49 
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    24   0.49 
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    24   0.49 
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    24   0.49 
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    24   0.49 
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           24   0.49 
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    24   0.49 
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    24   0.49 
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    23   1.5  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   2.0  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   3.5  
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    21   4.6  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   6.1  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   6.1  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 24.6 bits (51), Expect = 0.37
 Identities = 12/45 (26%), Positives = 19/45 (42%)
 Frame = +3

Query: 132  TATKVTWTSTVARKFAAKNTSHATISRECTGLSAPMSGSTSGQPA 266
            T T   WT+T  R+      +  + +   T  + P  G+T   PA
Sbjct: 1046 TTTSPWWTTTTTRRTTTTRPTTTSTTTRPTTTNWPTQGTTIPPPA 1090


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 24.2 bits (50), Expect = 0.49
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 207 SRECTGLSAPMSGSTSGQPARRRP 278
           S   TG+++P   ST+G P R  P
Sbjct: 104 STSSTGVASPQDLSTNGAPPRSTP 127


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 24.2 bits (50), Expect = 0.49
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 207 SRECTGLSAPMSGSTSGQPARRRP 278
           S   TG+++P   ST+G P R  P
Sbjct: 104 STSSTGVASPQDLSTNGAPPRSTP 127


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 24.2 bits (50), Expect = 0.49
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 207 SRECTGLSAPMSGSTSGQPARRRP 278
           S   TG+++P   ST+G P R  P
Sbjct: 104 STSSTGVASPQDLSTNGAPPRSTP 127


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 24.2 bits (50), Expect = 0.49
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 207 SRECTGLSAPMSGSTSGQPARRRP 278
           S   TG+++P   ST+G P R  P
Sbjct: 104 STSSTGVASPQDLSTNGAPPRSTP 127


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 24.2 bits (50), Expect = 0.49
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 207 SRECTGLSAPMSGSTSGQPARRRP 278
           S   TG+++P   ST+G P R  P
Sbjct: 104 STSSTGVASPQDLSTNGAPPRSTP 127


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 24.2 bits (50), Expect = 0.49
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 207 SRECTGLSAPMSGSTSGQPARRRP 278
           S   TG+++P   ST+G P R  P
Sbjct: 60  STSSTGVASPQDLSTNGAPPRSTP 83


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 24.2 bits (50), Expect = 0.49
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 207 SRECTGLSAPMSGSTSGQPARRRP 278
           S   TG+++P   ST+G P R  P
Sbjct: 104 STSSTGVASPQDLSTNGAPPRSTP 127


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 24.2 bits (50), Expect = 0.49
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 207 SRECTGLSAPMSGSTSGQPARRRP 278
           S   TG+++P   ST+G P R  P
Sbjct: 104 STSSTGVASPQDLSTNGAPPRSTP 127


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 24.2 bits (50), Expect = 0.49
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 207 SRECTGLSAPMSGSTSGQPARRRP 278
           S   TG+++P   ST+G P R  P
Sbjct: 104 STSSTGVASPQDLSTNGAPPRSTP 127


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 9/38 (23%), Positives = 19/38 (50%)
 Frame = -1

Query: 208 EIVAWLVFFAANFLATVEVHVTLVAVPRLILVREPWVE 95
           E  A L+F    ++ ++     L    +L+L+ E W++
Sbjct: 201 ESAAQLIFMNVQWVRSIPAFTCLPLSDQLLLLEESWLD 238


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 22.2 bits (45), Expect = 2.0
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +3

Query: 48  ICLR*SNRPPTSKQHLSTH 104
           IC +   RP T K HL TH
Sbjct: 254 ICGKSYARPSTLKTHLRTH 272


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 3.5
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +2

Query: 236 NEWVDKWTTSAPKTFAG 286
           N++VD +T + P  F+G
Sbjct: 1   NQYVDSYTCTCPLGFSG 17


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +3

Query: 69  RPPTSKQHLSTH 104
           RP T K HL TH
Sbjct: 5   RPSTLKTHLRTH 16


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 11/30 (36%), Positives = 12/30 (40%)
 Frame = +3

Query: 201 TISRECTGLSAPMSGSTSGQPARRRPSPVG 290
           T   E TGLS P       + A   P P G
Sbjct: 40  TPDTEATGLSLPACRLFCSEAAALWPKPTG 69


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +2

Query: 305 VPDALIYFDLF 337
           VP  L+YFD+F
Sbjct: 223 VPRVLMYFDIF 233


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,507
Number of Sequences: 336
Number of extensions: 2150
Number of successful extensions: 26
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8752267
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)