Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30853
(689 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein pr... 94 1e-21
AY490815-1|AAR82970.1| 136|Tribolium castaneum glass protein pr... 93 1e-21
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 80 1e-17
AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein ... 80 1e-17
L01616-1|AAA30096.1| 74|Tribolium castaneum zinc finger protei... 74 1e-15
AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like prote... 71 1e-14
DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped prot... 53 3e-09
L01617-1|AAA30097.1| 46|Tribolium castaneum zinc finger protei... 46 3e-07
X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. 38 8e-05
L01615-1|AAA30095.1| 69|Tribolium castaneum zinc finger protei... 38 8e-05
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 29 0.036
U09586-2|AAC47271.1| 712|Tribolium castaneum protease, reverse ... 25 0.44
EF592536-1|ABQ95982.1| 598|Tribolium castaneum beta-N-acetylglu... 21 7.2
AY675073-1|AAV74190.1| 533|Tribolium castaneum chitinase 5 prot... 21 7.2
AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor ... 21 7.2
EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock prote... 21 9.5
AF317551-1|AAG39634.1| 312|Tribolium castaneum distal-less prot... 21 9.5
>AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein
protein.
Length = 392
Score = 93.9 bits (223), Expect = 1e-21
Identities = 39/81 (48%), Positives = 56/81 (69%), Gaps = 1/81 (1%)
Frame = +1
Query: 229 CKFCGKVFPA-ANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRDIHNKERPFRCPL 405
C+ CGK + + L HLRTH+GE+PY+C C +SFS ++NL HVR H+ E+PFRCP+
Sbjct: 252 CRICGKSYARPSTLKTHLRTHSGEKPYRCIDCNKSFSQAANLTAHVR-THSGEKPFRCPV 310
Query: 406 CDRCFGQQTNLDRHLKKHEAE 468
CDR F Q +++ H++ H E
Sbjct: 311 CDRRFSQSSSVTTHMRTHSGE 331
Score = 93.5 bits (222), Expect = 1e-21
Identities = 41/90 (45%), Positives = 57/90 (63%), Gaps = 1/90 (1%)
Frame = +1
Query: 202 SRKGRDQYACKFCGKVFP-AANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRDIHN 378
+ G Y C C K F AANLT H+RTH+GE+P++C C+R FS SS++ H+R H+
Sbjct: 271 THSGEKPYRCIDCNKSFSQAANLTAHVRTHSGEKPFRCPVCDRRFSQSSSVTTHMR-THS 329
Query: 379 KERPFRCPLCDRCFGQQTNLDRHLKKHEAE 468
ERP+RC LC + F + L +HL+ H E
Sbjct: 330 GERPYRCRLCKKAFSDSSTLTKHLRIHSGE 359
Score = 89.0 bits (211), Expect = 3e-20
Identities = 37/89 (41%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Frame = +1
Query: 202 SRKGRDQYACKFCGKVFP-AANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRDIHN 378
+ G + C C + F ++++T H+RTH+GE+PY+C+ C+++FS SS L +H+R IH+
Sbjct: 299 THSGEKPFRCPVCDRRFSQSSSVTTHMRTHSGERPYRCRLCKKAFSDSSTLTKHLR-IHS 357
Query: 379 KERPFRCPLCDRCFGQQTNLDRHLKKHEA 465
E+P+ C LC F Q NL+RH++ H A
Sbjct: 358 GEKPYECKLCLLRFSQSGNLNRHMRVHGA 386
Score = 32.7 bits (71), Expect = 0.003
Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +1
Query: 295 EQPYKCKYCERSFSISSNLQRHVRDI--HNKERPFRCPLCDRCFGQQTNLDRHLKKHEAE 468
E P Y S SS +RH ++ + ++P C +C + + + + L HL+ H E
Sbjct: 216 ETPVLASYKSVPMSFSSPRRRHSINLLEEDNQKPNVCRICGKSYARPSTLKTHLRTHSGE 275
>AY490815-1|AAR82970.1| 136|Tribolium castaneum glass protein
protein.
Length = 136
Score = 93.5 bits (222), Expect = 1e-21
Identities = 41/90 (45%), Positives = 57/90 (63%), Gaps = 1/90 (1%)
Frame = +1
Query: 202 SRKGRDQYACKFCGKVFP-AANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRDIHN 378
+ G Y C C K F AANLT H+RTH+GE+P++C C+R FS SS++ H+R H+
Sbjct: 15 THSGEKPYRCIDCNKSFSQAANLTAHVRTHSGEKPFRCPVCDRRFSQSSSVTTHMR-THS 73
Query: 379 KERPFRCPLCDRCFGQQTNLDRHLKKHEAE 468
ERP+RC LC + F + L +HL+ H E
Sbjct: 74 GERPYRCRLCKKAFSDSSTLTKHLRIHSGE 103
Score = 89.0 bits (211), Expect = 3e-20
Identities = 37/89 (41%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Frame = +1
Query: 202 SRKGRDQYACKFCGKVFP-AANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRDIHN 378
+ G + C C + F ++++T H+RTH+GE+PY+C+ C+++FS SS L +H+R IH+
Sbjct: 43 THSGEKPFRCPVCDRRFSQSSSVTTHMRTHSGERPYRCRLCKKAFSDSSTLTKHLR-IHS 101
Query: 379 KERPFRCPLCDRCFGQQTNLDRHLKKHEA 465
E+P+ C LC F Q NL+RH++ H A
Sbjct: 102 GEKPYECKLCLLRFSQSGNLNRHMRVHGA 130
Score = 86.2 bits (204), Expect = 2e-19
Identities = 35/70 (50%), Positives = 50/70 (71%)
Frame = +1
Query: 259 ANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRDIHNKERPFRCPLCDRCFGQQTNL 438
+ L HLRTH+GE+PY+C C +SFS ++NL HVR H+ E+PFRCP+CDR F Q +++
Sbjct: 7 STLKTHLRTHSGEKPYRCIDCNKSFSQAANLTAHVR-THSGEKPFRCPVCDRRFSQSSSV 65
Query: 439 DRHLKKHEAE 468
H++ H E
Sbjct: 66 TTHMRTHSGE 75
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 80.2 bits (189), Expect = 1e-17
Identities = 39/95 (41%), Positives = 59/95 (62%), Gaps = 5/95 (5%)
Frame = +1
Query: 238 CGKVF-PAANLTRHLRTHTGEQPYKCK--YCERSFSISSNLQRHVRDIHNKERPFRCPLC 408
CGKV+ ++L HLR HTGE+P+ C +C + F+ S LQRH+R H E+ F CP+C
Sbjct: 322 CGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGKRFTRSDELQRHLRT-HTGEKRFACPIC 380
Query: 409 DRCFGQQTNLDRHLKKHEAEG--GDSPSSADTERD 507
++ F + +L +H+K H G G S S +D+E +
Sbjct: 381 NKRFMRSDHLAKHVKTHNGNGKKGSSDSCSDSEEN 415
Score = 52.8 bits (121), Expect = 3e-09
Identities = 30/74 (40%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Frame = +1
Query: 172 YAKFRELNSGSR--KGRDQYACK--FCGKVFPAAN-LTRHLRTHTGEQPYKCKYCERSFS 336
Y K L + R G + C FCGK F ++ L RHLRTHTGE+ + C C + F
Sbjct: 326 YGKTSHLKAHLRWHTGERPFVCNWLFCGKRFTRSDELQRHLRTHTGEKRFACPICNKRFM 385
Query: 337 ISSNLQRHVRDIHN 378
S +L +HV+ HN
Sbjct: 386 RSDHLAKHVK-THN 398
Score = 29.5 bits (63), Expect = 0.027
Identities = 18/77 (23%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Frame = +1
Query: 241 GKVFPAANLTRHLRTHTGEQPYKCKYCERSFSIS-SNLQRHVRDIHNKERPFRCPLCDRC 417
G + P R R +TG C C+ + + + + ++IH+ P C +
Sbjct: 270 GGLPPQVPSPRSQRRYTGRATCDCPNCQEAERLGPAGVHLRKKNIHS----CHIPGCGKV 325
Query: 418 FGQQTNLDRHLKKHEAE 468
+G+ ++L HL+ H E
Sbjct: 326 YGKTSHLKAHLRWHTGE 342
>AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein
protein.
Length = 370
Score = 80.2 bits (189), Expect = 1e-17
Identities = 40/95 (42%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
Frame = +1
Query: 211 GRDQYACKFCGKVF-PAANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRDIHNKER 387
G Y C+ C + F ANL RHLR HTGE+PY C++C FS S+ L+ HV IH E+
Sbjct: 187 GERPYRCEHCDRQFVQVANLRRHLRVHTGERPYGCEHCSMKFSDSNQLKAHVL-IHTNEK 245
Query: 388 PFRCPLCDRCFGQQTNLDRHLKKHEAEGGDSPSSA 492
PF C C F ++ +L H E E +P+ A
Sbjct: 246 PFECDKCRGRFRRRHHLVHHKCGGEEEAERAPAPA 280
Score = 77.4 bits (182), Expect = 1e-16
Identities = 42/130 (32%), Positives = 64/130 (49%), Gaps = 9/130 (6%)
Frame = +1
Query: 106 PSPFNFLSPLLGTDGPDR--------QQSAYAKFRELNSGSRKGRDQYACKFCGKVFPAA 261
PSP + +SP + DR + Y + + + G + C+ C K F
Sbjct: 116 PSPTSSVSPEVKDSSRDRPFTCEVCNRSFGYKHVLQNHERTHTGEKPFECQECHKRFTRD 175
Query: 262 N-LTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRDIHNKERPFRCPLCDRCFGQQTNL 438
+ L H+R HTGE+PY+C++C+R F +NL+RH+R +H ERP+ C C F L
Sbjct: 176 HHLKTHMRLHTGERPYRCEHCDRQFVQVANLRRHLR-VHTGERPYGCEHCSMKFSDSNQL 234
Query: 439 DRHLKKHEAE 468
H+ H E
Sbjct: 235 KAHVLIHTNE 244
>L01616-1|AAA30096.1| 74|Tribolium castaneum zinc finger protein
protein.
Length = 74
Score = 73.7 bits (173), Expect = 1e-15
Identities = 31/63 (49%), Positives = 43/63 (68%)
Frame = +1
Query: 280 RTHTGEQPYKCKYCERSFSISSNLQRHVRDIHNKERPFRCPLCDRCFGQQTNLDRHLKKH 459
RTHTGE+P++C+ C + F+ +L+ H+R +H ERP+RC CDR F Q NL RHL+ H
Sbjct: 2 RTHTGEKPFECQECHKRFTRDHHLKTHMR-LHTGERPYRCEHCDRQFVQVANLRRHLRVH 60
Query: 460 EAE 468
E
Sbjct: 61 TGE 63
Score = 68.1 bits (159), Expect = 6e-14
Identities = 29/67 (43%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Frame = +1
Query: 211 GRDQYACKFCGKVFPAAN-LTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRDIHNKER 387
G + C+ C K F + L H+R HTGE+PY+C++C+R F +NL+RH+R +H ER
Sbjct: 6 GEKPFECQECHKRFTRDHHLKTHMRLHTGERPYRCEHCDRQFVQVANLRRHLR-VHTGER 64
Query: 388 PFRCPLC 408
P+ C C
Sbjct: 65 PYGCEHC 71
>AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like protein
protein.
Length = 314
Score = 70.5 bits (165), Expect = 1e-14
Identities = 38/110 (34%), Positives = 58/110 (52%), Gaps = 6/110 (5%)
Frame = +1
Query: 166 SAYAKFREL-NSGSRKGRDQYACKFCGKVFPAAN-LTRHLRTHTGEQPYKCKYCERSFSI 339
S +K ++L ++ K D C C +V + L H RTHTGE+P+KCK C R+F+
Sbjct: 115 SETSKLQQLVDNIEHKLSDPNQCVICHRVLSCKSALQMHYRTHTGERPFKCKICGRAFTT 174
Query: 340 SSNLQRHVRDIHNKERPFR----CPLCDRCFGQQTNLDRHLKKHEAEGGD 477
NL+ H+ +H + P R CP+C + F L +H++ H E D
Sbjct: 175 KGNLKTHM-GVHRAKPPMRVLHQCPVCHKKFTNALVLQQHIRLHTGEPTD 223
>DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped
protein.
Length = 126
Score = 52.8 bits (121), Expect = 3e-09
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Frame = +1
Query: 187 ELNSGSRKGRDQYACKFCGKVFPAA-NLTRHLRTHTGEQPYKCKYCERSFSISSNLQRH 360
+L +G K + Q+ CK+C + F + NL H RTHT E+PY C C ++F +L+ H
Sbjct: 68 KLVAGKLKPKRQFICKYCNRQFTKSYNLLIHERTHTDERPYSCDICGKAFRRQDHLRDH 126
Score = 48.4 bits (110), Expect = 5e-08
Identities = 21/51 (41%), Positives = 30/51 (58%)
Frame = +1
Query: 295 EQPYKCKYCERSFSISSNLQRHVRDIHNKERPFRCPLCDRCFGQQTNLDRH 447
++ + CKYC R F+ S NL H R H ERP+ C +C + F +Q +L H
Sbjct: 77 KRQFICKYCNRQFTKSYNLLIHER-THTDERPYSCDICGKAFRRQDHLRDH 126
Score = 23.8 bits (49), Expect = 1.3
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +1
Query: 382 ERPFRCPLCDRCFGQQTNLDRHLKKHEAE 468
+R F C C+R F + NL H + H E
Sbjct: 77 KRQFICKYCNRQFTKSYNLLIHERTHTDE 105
>L01617-1|AAA30097.1| 46|Tribolium castaneum zinc finger protein
protein.
Length = 46
Score = 46.0 bits (104), Expect = 3e-07
Identities = 18/37 (48%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +1
Query: 229 CKFCGKVFPAANLTR-HLRTHTGEQPYKCKYCERSFS 336
C C K F L + H+RTHTGE+P+ C YC R+F+
Sbjct: 10 CTICPKAFSRPWLLQGHIRTHTGEKPFSCTYCNRAFA 46
Score = 45.2 bits (102), Expect = 5e-07
Identities = 22/48 (45%), Positives = 28/48 (58%)
Frame = +1
Query: 277 LRTHTGEQPYKCKYCERSFSISSNLQRHVRDIHNKERPFRCPLCDRCF 420
+RTHT P KC C ++FS LQ H+R H E+PF C C+R F
Sbjct: 1 IRTHT--LPCKCTICPKAFSRPWLLQGHIRT-HTGEKPFSCTYCNRAF 45
>X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein.
Length = 524
Score = 37.9 bits (84), Expect = 8e-05
Identities = 18/66 (27%), Positives = 32/66 (48%)
Frame = +1
Query: 262 NLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRDIHNKERPFRCPLCDRCFGQQTNLD 441
+L HLR H G +P++C C+ + S L H++ H+ + C C +L
Sbjct: 245 HLEYHLRNHAGSKPFQCNKCDYTCVNKSMLNSHMKS-HSNVYRYSCRDCSYATKYCHSLK 303
Query: 442 RHLKKH 459
HL+++
Sbjct: 304 IHLRRY 309
Score = 28.7 bits (61), Expect = 0.047
Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +1
Query: 277 LRTHTGEQPYKCKYCERSFSISSNLQRHVRDIHNKE-RPFRCPLCDRCFGQQTNLDRHLK 453
+ +H + +KCK C+ +I+ Q + +H +E + CP C + +L+ HL+
Sbjct: 193 VNSHGKIKTFKCKQCD-FVAITKLEQWNHSKVHIREDKRLTCPKCPFITEYKHHLEYHLR 251
Query: 454 KH 459
H
Sbjct: 252 NH 253
Score = 21.0 bits (42), Expect = 9.5
Identities = 9/29 (31%), Positives = 12/29 (41%)
Frame = +1
Query: 373 HNKERPFRCPLCDRCFGQQTNLDRHLKKH 459
+NKE C C+ FG H+ H
Sbjct: 465 NNKEEGNSCQYCNIAFGDAVLYTIHMGYH 493
>L01615-1|AAA30095.1| 69|Tribolium castaneum zinc finger protein
protein.
Length = 69
Score = 37.9 bits (84), Expect = 8e-05
Identities = 18/66 (27%), Positives = 32/66 (48%)
Frame = +1
Query: 262 NLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRDIHNKERPFRCPLCDRCFGQQTNLD 441
+L HLR H G +P++C C+ + S L H++ H+ + C C +L
Sbjct: 3 HLEYHLRNHAGSKPFQCNKCDYTCVNKSMLNSHMKS-HSNVYRYSCRDCSYATKYCHSLK 61
Query: 442 RHLKKH 459
HL+++
Sbjct: 62 IHLRRY 67
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 29.1 bits (62), Expect = 0.036
Identities = 26/93 (27%), Positives = 39/93 (41%)
Frame = +1
Query: 229 CKFCGKVFPAANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRDIHNKERPFRCPLC 408
CK C + F + + L H + + ++ RS + S +R R+ K P R L
Sbjct: 550 CKVCDQAFSSL---KELSNHMVKNSHYKEHIMRSITESGGRRRQTREKRKKSLPVRKLL- 605
Query: 409 DRCFGQQTNLDRHLKKHEAEGGDSPSSADTERD 507
L+R +HE + GDS S D RD
Sbjct: 606 --------ELER--AQHEFKNGDSSSLLDKMRD 628
Score = 25.8 bits (54), Expect = 0.33
Identities = 10/32 (31%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +1
Query: 190 LNSGSRKGRDQYACKFCGKVFPA-ANLTRHLR 282
LN G+ + ++ C +C + FP+ A +T H++
Sbjct: 367 LNKGAEQAKNVLKCVWCKQSFPSLAAMTTHMK 398
Score = 21.8 bits (44), Expect = 5.4
Identities = 7/29 (24%), Positives = 13/29 (44%)
Frame = +1
Query: 289 TGEQPYKCKYCERSFSISSNLQRHVRDIH 375
T + KC +C+ F + H+ +H
Sbjct: 1049 TSDSIMKCAFCDTPFISKGAYRHHLSKMH 1077
Score = 21.0 bits (42), Expect = 9.5
Identities = 6/21 (28%), Positives = 14/21 (66%)
Frame = +1
Query: 307 KCKYCERSFSISSNLQRHVRD 369
KC +C++SF + + H+++
Sbjct: 379 KCVWCKQSFPSLAAMTTHMKE 399
>U09586-2|AAC47271.1| 712|Tribolium castaneum protease, reverse
transcriptase andRNase H protein.
Length = 712
Score = 25.4 bits (53), Expect = 0.44
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = +1
Query: 250 FPAANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVR 366
FP T+H+R G + K+C R + + +L + +R
Sbjct: 526 FPVPQKTKHVRAFLGLCNFYRKFCARYSAATQDLNKLLR 564
>EF592536-1|ABQ95982.1| 598|Tribolium castaneum
beta-N-acetylglucosaminidase NAG1 protein.
Length = 598
Score = 21.4 bits (43), Expect = 7.2
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -2
Query: 484 SVNRRLQPRASSNADRGLSAARSTYRRAD 398
SV+ RL PRA++ + S +T+R A+
Sbjct: 530 SVDTRLWPRAAALGEVLWSEPTNTWREAE 558
>AY675073-1|AAV74190.1| 533|Tribolium castaneum chitinase 5
protein.
Length = 533
Score = 21.4 bits (43), Expect = 7.2
Identities = 8/29 (27%), Positives = 13/29 (44%)
Frame = +1
Query: 313 KYCERSFSISSNLQRHVRDIHNKERPFRC 399
K C++ F ++ R +H K F C
Sbjct: 476 KECKQDFMPHELCDKYYRCVHGKPTEFAC 504
>AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor
protein protein.
Length = 585
Score = 21.4 bits (43), Expect = 7.2
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = -2
Query: 298 AHRCECADVGSG 263
+HRC C+D SG
Sbjct: 167 SHRCHCSDGYSG 178
>EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock protein
90 protein.
Length = 721
Score = 21.0 bits (42), Expect = 9.5
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +1
Query: 460 EAEGGDSPSSADTERDVRTLMISV 531
+A+GGD+PS+ E + + M V
Sbjct: 697 DAQGGDAPSADAAESEDASRMEEV 720
>AF317551-1|AAG39634.1| 312|Tribolium castaneum distal-less
protein.
Length = 312
Score = 21.0 bits (42), Expect = 9.5
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +3
Query: 99 LRTESFQFFIPPSGHRRTGP 158
LRT F P+G+ TGP
Sbjct: 37 LRTSYQHHFNSPAGNAHTGP 56
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,675
Number of Sequences: 336
Number of extensions: 3295
Number of successful extensions: 72
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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