Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30853
(689 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 65 8e-12
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 60 3e-10
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 57 2e-09
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 56 6e-09
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 52 6e-08
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 52 1e-07
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 48 1e-06
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 47 3e-06
SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|ch... 46 5e-06
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 46 7e-06
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 45 9e-06
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 44 2e-05
SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3 |Schizosacc... 31 0.16
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 28 1.5
SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces pomb... 28 1.5
SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharo... 27 2.6
SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large subunit|... 27 2.6
SPCC1827.07c ||SPCP1E11.01c|SPX/EXS domain protein|Schizosacchar... 27 3.4
SPBC2D10.06 |rep1|rec16|MBF transcription factor complex subunit... 26 5.9
SPCC364.02c |bis1||stress response protein Bis1|Schizosaccharomy... 26 5.9
SPAC18B11.11 ||SPAC1F5.01|GTPase activating protein |Schizosacch... 26 5.9
SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|ch... 26 5.9
SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces pomb... 26 5.9
SPAC2F3.16 |||ubiquitin-protein ligase E3 |Schizosaccharomyces p... 25 7.8
SPAC1002.13c |psu1||beta-glucosidase Psu1 |Schizosaccharomyces p... 25 7.8
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 65.3 bits (152), Expect = 8e-12
Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 3/105 (2%)
Frame = +1
Query: 208 KGRDQYACKF--CGKVFPAA-NLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRDIHN 378
K + Y C F C K F A NL H+ THT +P++C C++SF+ + +RH +H
Sbjct: 565 KSQGNYVCTFAGCNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRH-EQLHT 623
Query: 379 KERPFRCPLCDRCFGQQTNLDRHLKKHEAEGGDSPSSADTERDVR 513
+ F C C++ F + L+RH K +E G + TER ++
Sbjct: 624 GIKAFACVTCNQRFARMDALNRHYK---SEVGQNCLRTATERGIQ 665
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 60.1 bits (139), Expect = 3e-10
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 7/92 (7%)
Frame = +1
Query: 205 RKGRDQYACKF--CGKVFPAANLT-RHLRTHTGEQPYKCKY--CERSFSISSNLQRHVRD 369
R + + C + CGK + +L +HLRTH+ E+P+ C Y C ++F S+L+ H R
Sbjct: 17 RSAKKIFHCPYEECGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIHKR- 75
Query: 370 IHNKERPFRCPL--CDRCFGQQTNLDRHLKKH 459
H +PF C CD F Q +L+RH++ H
Sbjct: 76 CHTNVKPFSCHYDGCDAQFYTQQHLERHIEVH 107
Score = 54.0 bits (124), Expect = 2e-08
Identities = 35/111 (31%), Positives = 55/111 (49%), Gaps = 7/111 (6%)
Frame = +1
Query: 172 YAKFRELNSGSRKGRDQYACKFCGKVFP-AANLTRHLRTH--TGEQ--PYKCKY--CERS 330
+ K+ +L + R+ +C CG+ F AA+L H+ H T E+ Y C C++S
Sbjct: 188 FEKWSQLQNHIREAHVP-SCSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKS 246
Query: 331 FSISSNLQRHVRDIHNKERPFRCPLCDRCFGQQTNLDRHLKKHEAEGGDSP 483
F+ SS L++H+ IH F C C FG + L RHL++ + P
Sbjct: 247 FTRSSALKKHISVIHEGNMAFHCDSCGTKFGYKHMLQRHLERGTCKKAHKP 297
Score = 42.7 bits (96), Expect = 5e-05
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 8/88 (9%)
Frame = +1
Query: 223 YACKFCG---KVFPAANLTRHLRTHTGEQPYKCKY--CERSFSISSNLQRHVRDIHNKER 387
++C + G + + +L RH+ H +PY C + C+ FS L+ H+ H
Sbjct: 83 FSCHYDGCDAQFYTQQHLERHIEVHRKPKPYACTWEGCDECFSKHQQLRSHISACHTHLL 142
Query: 388 PFRCPL--CDRCFGQQTNLDRHLKK-HE 462
P+ C C+ F + L H+ + HE
Sbjct: 143 PYPCTYQDCELRFATKQKLQNHVNRAHE 170
Score = 40.3 bits (90), Expect = 3e-04
Identities = 26/75 (34%), Positives = 33/75 (44%), Gaps = 6/75 (8%)
Frame = +1
Query: 223 YACKF--CGKVFPA-ANLTRHLRT-HTGEQPYKCKY--CERSFSISSNLQRHVRDIHNKE 384
YAC + C + F L H+ HT PY C Y CE F+ LQ HV H K
Sbjct: 113 YACTWEGCDECFSKHQQLRSHISACHTHLLPYPCTYQDCELRFATKQKLQNHVNRAHEKI 172
Query: 385 RPFRCPLCDRCFGQQ 429
+ CP + C G +
Sbjct: 173 ISYSCP-HESCVGHE 186
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 57.2 bits (132), Expect = 2e-09
Identities = 28/88 (31%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Frame = +1
Query: 220 QYACKFCG---KVFPAANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRDIHNKERP 390
+Y C + G ++ N+ H++TH ++PY+C C+ F +L+RH+R IH RP
Sbjct: 442 KYVCLYNGCNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLR-IHENGRP 500
Query: 391 FRCPLCDRCFGQQTNLDRHLKKHEAEGG 474
+ C C + F + L+RH +++ GG
Sbjct: 501 YVCE-CLKRFNRLDALNRHKQRNICVGG 527
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 55.6 bits (128), Expect = 6e-09
Identities = 35/148 (23%), Positives = 64/148 (43%), Gaps = 12/148 (8%)
Frame = +1
Query: 52 PSFHASESILNASHSPYVPSPFNFLSPLLGTDGPDRQQSAYAKF-RELNSGSRKGRDQYA 228
PS+HA + + S++ +PS +P G + + + N+ R A
Sbjct: 327 PSYHAEQEVNVNSYNGGIPSTSYNDTPQQSVTGSYNSGETMSTYLNQTNTSGRSPNSMEA 386
Query: 229 CKFCGKVFPAANLTRHLRTHT-----------GEQPYKCKYCERSFSISSNLQRHVRDIH 375
+ G + ++ R R G + + C C + F S +L+RH+R +H
Sbjct: 387 TEQIGTIGTDGSMKRRKRRQPSNRKTSVPRSPGGKSFVCPECSKKFKRSEHLRRHIRSLH 446
Query: 376 NKERPFRCPLCDRCFGQQTNLDRHLKKH 459
E+PF C +C + F ++ NL +H + H
Sbjct: 447 TSEKPFVC-ICGKRFSRRDNLRQHERLH 473
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 52.4 bits (120), Expect = 6e-08
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 3/51 (5%)
Frame = +1
Query: 223 YACKFCGKVFPAA-NLTRHLRTHTGEQPYKCKY--CERSFSISSNLQRHVR 366
Y C FC +VF + RH+R+HTGE+P++C Y C++ F+ L RHVR
Sbjct: 4 YECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVR 54
Score = 46.0 bits (104), Expect = 5e-06
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Frame = +1
Query: 304 YKCKYCERSFSISSNLQRHVRDIHNKERPFRC--PLCDRCFGQQTNLDRHLKKH 459
Y+C +C+R F + RH+R H E+PF C P C + F ++ L RH++ H
Sbjct: 4 YECPFCKRVFHRQEHQVRHIRS-HTGEKPFECSYPSCKKRFTRRDELIRHVRTH 56
Score = 30.7 bits (66), Expect = 0.21
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1
Query: 385 RPFRCPLCDRCFGQQTNLDRHLKKHEAE 468
+ + CP C R F +Q + RH++ H E
Sbjct: 2 KSYECPFCKRVFHRQEHQVRHIRSHTGE 29
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 51.6 bits (118), Expect = 1e-07
Identities = 26/54 (48%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Frame = +1
Query: 223 YACKFCGKVF-PAANLTRHLRTHTGEQPYKCKY--CERSFSISSNLQRHVRDIH 375
Y C C K F + TRH+RTHTGE+P+ C + C + FS S L RH R IH
Sbjct: 26 YKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHAR-IH 78
Score = 42.3 bits (95), Expect = 6e-05
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = +1
Query: 268 TRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRDIHNKERPFRC--PLCDRCFGQQTNLD 441
+R + +PYKC C ++F + RH+R H E+P C P C + F + L
Sbjct: 14 SRSTKNPDAPRPYKCPLCTKAFYRLEHQTRHIR-THTGEKPHVCTFPGCAKRFSRSDELT 72
Query: 442 RHLKKH 459
RH + H
Sbjct: 73 RHARIH 78
Score = 33.9 bits (74), Expect = 0.022
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 385 RPFRCPLCDRCFGQQTNLDRHLKKHEAE 468
RP++CPLC + F + + RH++ H E
Sbjct: 24 RPYKCPLCTKAFYRLEHQTRHIRTHTGE 51
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 48.0 bits (109), Expect = 1e-06
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Frame = +1
Query: 166 SAYAKFRELNSGSRKGRDQYACKFCGKVFPAA-NLTRHLRTHTGEQPYKCKY-------C 321
S+ A ++ N+ +K + QY C+ C + F +L RH+R+HT E+P+ C C
Sbjct: 52 SSTAAKKDPNAPPQKVK-QYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGC 110
Query: 322 ERSFSISSNLQRHVRDIHNKERPFR 396
R FS L RH + IH +P R
Sbjct: 111 GRQFSRRDLLLRHQQKIHRNPQPRR 135
Score = 27.9 bits (59), Expect = 1.5
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +1
Query: 379 KERPFRCPLCDRCFGQQTNLDRHLKKHEAE 468
K + + C C R F + +L RH++ H E
Sbjct: 66 KVKQYVCETCTRAFARLEHLKRHIRSHTNE 95
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 46.8 bits (106), Expect = 3e-06
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Frame = +1
Query: 292 GEQPYKCKY--CERSFSISSNLQRHVRDIHNKERPFRCPLCDRCFGQQTNLDRHLKKHEA 465
G+ YKC + C +SF+ + +RH R H + F CP C F + L+RH+ +
Sbjct: 13 GDIRYKCDFQGCTKSFTRKEHARRHFRS-HTNSKAFICPHCSSSFTRSDVLNRHVNQKHV 71
Query: 466 EGGDSPSSADTERDVRTLMIS 528
+ D+ S + D +TL+ S
Sbjct: 72 KQNDAGSQTHPKHD-KTLISS 91
Score = 44.8 bits (101), Expect = 1e-05
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Frame = +1
Query: 205 RKGRDQYACKF--CGKVFPAA-NLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRDIH 375
++G +Y C F C K F + RH R+HT + + C +C SF+ S L RHV H
Sbjct: 11 QEGDIRYKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHVNQKH 70
Query: 376 NKE 384
K+
Sbjct: 71 VKQ 73
>SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 249
Score = 46.0 bits (104), Expect = 5e-06
Identities = 19/42 (45%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
Frame = +1
Query: 265 LTRHLRTHTGEQPYKCKY--CERSFSISSNLQRHVRDIHNKE 384
L HLR+HTGE+P+ C C+RSF+ S L +H+R +H +
Sbjct: 93 LVAHLRSHTGEKPFICSVPECDRSFTRSDALAKHMRTVHEAD 134
Score = 34.3 bits (75), Expect = 0.017
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 8/63 (12%)
Frame = +1
Query: 304 YKCKY--CERSFSISSN---LQRHVRDIHNKERPFRC--PLCDRCFGQQTNLDRHLKK-H 459
Y C++ C R + ++ L H+R H E+PF C P CDR F + L +H++ H
Sbjct: 73 YTCEWDDCPRKGMVQTSRFALVAHLRS-HTGEKPFICSVPECDRSFTRSDALAKHMRTVH 131
Query: 460 EAE 468
EA+
Sbjct: 132 EAD 134
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 45.6 bits (103), Expect = 7e-06
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Frame = +1
Query: 205 RKGRDQYACKF--CGKVFPAA-NLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRDIH 375
R G ++ C + C K F +L RH RTH + + C +C R+F+ S L RHV+ +H
Sbjct: 20 RLGDPRFYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRHVQQMH 79
Score = 44.4 bits (100), Expect = 2e-05
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Frame = +1
Query: 250 FPAANLTRHLRTHT-GEQPYKCKY--CERSFSISSNLQRHVRDIHNKERPFRCPLCDRCF 420
F L + R H G+ + C Y C +SF+ +L+RH R H + F C C+R F
Sbjct: 7 FTEKPLKKRSRAHRLGDPRFYCTYPDCPKSFTRKEHLRRHERT-HENVKAFSCSFCNRAF 65
Query: 421 GQQTNLDRHLKK 456
+ L+RH+++
Sbjct: 66 ARSDVLNRHVQQ 77
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 45.2 bits (102), Expect = 9e-06
Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Frame = +1
Query: 193 NSGSRKGRDQYACKFCGKVFPA-ANLTRHLRTHTGEQPYKCKY--CERSFSISSNLQRHV 363
+S S +Y C C + F ++L H +HTGE+P+ C Y C ++F++ SN++RH
Sbjct: 458 SSTSSAANVRYRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQ 517
Query: 364 RDIH 375
R IH
Sbjct: 518 R-IH 520
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 44.0 bits (99), Expect = 2e-05
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +1
Query: 223 YACKFCGKVFPA-ANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRDIHN 378
+ C C K F NLTRH H+ +P C YCE L+RH++ HN
Sbjct: 31 FPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHIQRFHN 83
Score = 37.9 bits (84), Expect = 0.001
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +1
Query: 304 YKCKYCERSFSISSNLQRHVRDIHNKERPFRCPLCDRCFGQQTNLDRHLKK 456
+ C C + F+ NL RH + H+K P CP C+ ++ L RH+++
Sbjct: 31 FPCDQCAKRFTRHENLTRH-KACHSKAEPIPCPYCEIKCKRKDLLKRHIQR 80
>SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 732
Score = 31.1 bits (67), Expect = 0.16
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +1
Query: 307 KCKYCERSFSISSNLQRHVRDIHNKERPFRCPLCDRCFGQQTN 435
KC++C F L +H R+ H RC +CD+ G+ T+
Sbjct: 246 KCEFCNTHFYDDDELFKHCREKHE-----RCYICDQVAGRPTH 283
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 27.9 bits (59), Expect = 1.5
Identities = 25/96 (26%), Positives = 37/96 (38%)
Frame = +2
Query: 140 APTDRTGNRAPTPSSEN*TPARGRVGISTPASSAGRFSPQPT*PDICALTPVSSPTNVNT 319
AP+ T + PT S + + +T ASS S T + TP+SS +
Sbjct: 406 APSYNTSSVLPTSSVSSTPLSSANSTTATSASSTPLSSVNSTTATSASSTPLSSVNSTTA 465
Query: 320 ASARFQSHRICSDT*ETFTTRSDLSGVRSAIGASGS 427
SA + T T + + L+ V S S S
Sbjct: 466 TSASSTPLTSVNSTTATSASSTPLTSVNSTSATSAS 501
>SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 262
Score = 27.9 bits (59), Expect = 1.5
Identities = 25/95 (26%), Positives = 43/95 (45%)
Frame = +2
Query: 155 TGNRAPTPSSEN*TPARGRVGISTPASSAGRFSPQPT*PDICALTPVSSPTNVNTASARF 334
T + TPSS + T + STP SS+ S + + + SS ++++A A+
Sbjct: 142 TSSSTATPSSSSTTSSSSSSSSSTPISSSITSSISSSASSSVSSSSASSSGSISSADAKT 201
Query: 335 QSHRICSDT*ETFTTRSDLSGVRSAIGASGSRQTS 439
S + T F+T + + +A +S S TS
Sbjct: 202 VS-ASSNSTISGFSTSTTSASSSAAGNSSSSSYTS 235
>SPAC343.11c |msc1||multi-copy suppressor of Chk1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1588
Score = 27.1 bits (57), Expect = 2.6
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +2
Query: 269 PDICALTPVSSPTNVNT--ASARFQSHRICSDT*ETFTTRSDLS 394
P A TP++ P+N T ASAR S R S + + F T+ ++
Sbjct: 378 PSFLAQTPLTLPSNTKTPPASARQSSRRTRSTSGKGFETKISIN 421
>SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1752
Score = 27.1 bits (57), Expect = 2.6
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = +2
Query: 131 PFWAPTDRTGNRAPT--PSSEN*TPARGRVGISTPASSAGRFSPQPT*PDICALTPVSSP 304
P ++P+ + +P PSS + +P ++P+ S S PT P A +P SP
Sbjct: 1556 PSYSPSSPGYSTSPAYMPSSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSATSPSYSP 1615
Query: 305 TN 310
T+
Sbjct: 1616 TS 1617
>SPCC1827.07c ||SPCP1E11.01c|SPX/EXS domain
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 682
Score = 26.6 bits (56), Expect = 3.4
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 304 YKCKYCERSFSISSNLQRHVRDIH 375
Y +Y FSI++N Q HV DI+
Sbjct: 220 YMSRYTFTDFSITTNWQLHVEDIY 243
>SPBC2D10.06 |rep1|rec16|MBF transcription factor complex subunit
Rep1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 472
Score = 25.8 bits (54), Expect = 5.9
Identities = 14/45 (31%), Positives = 18/45 (40%)
Frame = +1
Query: 259 ANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRDIHNKERPF 393
A+L H + C YC + F S LQ H + ER F
Sbjct: 405 ADLVFHSSPLLSRSRFICCYCTKPFLSISKLQEHESSCSHVERLF 449
>SPCC364.02c |bis1||stress response protein Bis1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 384
Score = 25.8 bits (54), Expect = 5.9
Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = +2
Query: 56 HSTHPSLS*MHHTLLTYRVLSIFYPPF-WAPTDRTGNRAPTP 178
H + PS S HT L + P F W PT R + APTP
Sbjct: 347 HGSSPSAS--RHTALRTSI-----PKFSWTPTPRVKSTAPTP 381
>SPAC18B11.11 ||SPAC1F5.01|GTPase activating protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1294
Score = 25.8 bits (54), Expect = 5.9
Identities = 21/58 (36%), Positives = 23/58 (39%), Gaps = 3/58 (5%)
Frame = +1
Query: 187 ELNSGSRKGRDQYACKFCGKVF--PAANLTRHLRTHTGEQPYKCKY-CERSFSISSNL 351
ELN G K Q C FC KV L H + C Y S+SI SNL
Sbjct: 847 ELNEGLEKETIQSICLFCLKVIRTKKEELDGHKKLVNPNTKVFCLYLVSFSYSIISNL 904
>SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 628
Score = 25.8 bits (54), Expect = 5.9
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +1
Query: 64 ASESILNASHSPYVPSPFNFLS 129
AS S+ N + SP++PSP +F S
Sbjct: 77 ASASLRNNNVSPHIPSPSSFSS 98
>SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 478
Score = 25.8 bits (54), Expect = 5.9
Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +1
Query: 391 FRCPLCDRCFGQQTNLDRHLKK-HEAE 468
FRC CD F +Q+ L H + H+ E
Sbjct: 139 FRCDKCDMMFVKQSGLTNHKRTYHQVE 165
>SPAC2F3.16 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 425
Score = 25.4 bits (53), Expect = 7.8
Identities = 12/40 (30%), Positives = 17/40 (42%)
Frame = +1
Query: 205 RKGRDQYACKFCGKVFPAANLTRHLRTHTGEQPYKCKYCE 324
R + C C KV PAA ++ + G Y C C+
Sbjct: 176 RPAVENMLCMICSKVQPAAQYCKYCKNCMGR--YYCNKCK 213
>SPAC1002.13c |psu1||beta-glucosidase Psu1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 417
Score = 25.4 bits (53), Expect = 7.8
Identities = 27/142 (19%), Positives = 58/142 (40%), Gaps = 6/142 (4%)
Frame = +2
Query: 29 TRCIVPDFRHSTH----PSLS*MHHTLLTYRVLSIFYPPFWAPTDRTGNRAPTPSSEN*T 196
T + FRH H +S + + Y +++ T+ A T + + T
Sbjct: 14 TGALAAPFRHPHHLLNKRDVSVVTSKVYAYTTVTLEAAASAISTNGAAKEAATAAGDAET 73
Query: 197 PARGRVGISTPASS--AGRFSPQPT*PDICALTPVSSPTNVNTASARFQSHRICSDT*ET 370
+ ++ ASS A +P + ++TPVSS V++A++ S + +
Sbjct: 74 TSSVAASVTPAASSSVAASVTPVASSSVAASVTPVSSSAVVDSATSAAASSSVIPTSSSV 133
Query: 371 FTTRSDLSGVRSAIGASGSRQT 436
+ S+++ ++ A+ + T
Sbjct: 134 VASSSEVASSTTSSAAASATST 155
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,656,363
Number of Sequences: 5004
Number of extensions: 53931
Number of successful extensions: 300
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 274
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 319939482
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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