Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30853
(689 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein ... 60 2e-09
At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein ... 56 3e-08
At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein ... 56 3e-08
At3g48430.1 68416.m05287 zinc finger (C2H2 type) family protein ... 47 1e-05
At5g04240.1 68418.m00414 zinc finger (C2H2 type) family protein ... 44 1e-04
At3g60580.1 68416.m06777 zinc finger (C2H2 type) family protein ... 40 0.002
At3g29340.1 68416.m03684 zinc finger (C2H2 type) family protein ... 38 0.006
At1g26590.1 68414.m03239 zinc finger (C2H2 type) family protein ... 36 0.025
At3g53820.1 68416.m05946 zinc finger (C2H2 type) family protein ... 34 0.10
At3g13810.1 68416.m01744 zinc finger (C2H2 type) family protein ... 34 0.10
At1g55110.1 68414.m06294 zinc finger (C2H2 type) family protein ... 34 0.10
At2g02080.1 68415.m00144 zinc finger (C2H2 type) family protein ... 33 0.14
At5g03150.1 68418.m00263 zinc finger (C2H2 type) family protein ... 33 0.18
At3g45260.1 68416.m04887 zinc finger (C2H2 type) family protein ... 33 0.18
At2g02070.1 68415.m00143 zinc finger (C2H2 type) family protein ... 33 0.18
At1g68360.1 68414.m07808 zinc finger protein-related similar to ... 33 0.18
At5g60470.1 68418.m07584 zinc finger (C2H2 type) family protein ... 33 0.24
At1g14580.1 68414.m01734 zinc finger (C2H2 type) family protein ... 33 0.24
At5g66730.1 68418.m08412 zinc finger (C2H2 type) family protein ... 32 0.31
At5g05120.1 68418.m00543 zinc finger (C2H2 type) family protein ... 32 0.31
At1g26610.1 68414.m03241 zinc finger (C2H2 type) family protein ... 32 0.31
At1g03840.1 68414.m00365 zinc finger (C2H2 type) family protein ... 32 0.31
At3g62240.1 68416.m06992 zinc finger (C2H2 type) family protein ... 32 0.41
At2g45120.1 68415.m05615 zinc finger (C2H2 type) family protein ... 32 0.41
At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein ... 31 0.54
At4g02670.1 68417.m00362 zinc finger (C2H2 type) family protein ... 31 0.72
At3g49930.1 68416.m05460 zinc finger (C2H2 type) family protein ... 31 0.72
At1g09920.1 68414.m01116 TRAF-type zinc finger-related contains ... 31 0.72
At5g10970.1 68418.m01275 zinc finger (C2H2 type) family protein ... 31 0.95
At2g34790.1 68415.m04272 FAD-binding domain-containing protein s... 31 0.95
At5g25160.1 68418.m02983 zinc finger (C2H2 type) family protein ... 30 1.3
At4g32600.1 68417.m04642 zinc finger (C3HC4-type RING finger) fa... 30 1.3
At4g12240.1 68417.m01941 zinc finger (C2H2 type) family protein ... 30 1.3
At3g20880.1 68416.m02640 zinc finger (C2H2 type) protein (WIP4) ... 30 1.3
At3g16560.1 68416.m02116 protein phosphatase 2C-related / PP2C-r... 30 1.3
At1g51220.1 68414.m05761 zinc finger (C2H2 type) protein (WIP5) ... 30 1.3
At5g52010.1 68418.m06454 zinc finger (C2H2 type) family protein ... 30 1.7
At5g24810.1 68418.m02930 ABC1 family protein contains Pfam domai... 30 1.7
At5g06070.1 68418.m00673 zinc finger (C2H2 type) family protein ... 30 1.7
At2g31270.1 68415.m03818 hydroxyproline-rich glycoprotein family... 30 1.7
At1g08290.1 68414.m00915 zinc finger (C2H2 type) protein (WIP3) ... 30 1.7
At5g63280.1 68418.m07942 zinc finger (C2H2 type) family protein ... 29 2.2
At5g20870.1 68418.m02478 glycosyl hydrolase family 17 protein si... 29 2.2
At5g06650.1 68418.m00751 zinc finger (C2H2 type) family protein ... 29 2.2
At3g53600.1 68416.m05920 zinc finger (C2H2 type) family protein ... 29 2.2
At1g55700.1 68414.m06378 DC1 domain-containing protein contains ... 29 2.2
At1g49900.1 68414.m05596 zinc finger (C2H2 type) family protein ... 29 2.2
At1g67030.1 68414.m07622 zinc finger (C2H2 type) family protein ... 29 2.9
At1g18560.1 68414.m02315 hAT dimerisation domain-containing prot... 29 2.9
At3g57670.1 68416.m06425 zinc finger (C2H2 type) protein (WIP2) ... 29 3.8
At3g05700.1 68416.m00637 drought-responsive family protein conta... 29 3.8
At3g46070.1 68416.m04985 zinc finger (C2H2 type) family protein ... 23 5.0
At5g49030.1 68418.m06067 tRNA synthetase class I (I, L, M and V)... 28 5.1
At4g22410.1 68417.m03238 ubiquitin carboxyl-terminal hydrolase f... 28 5.1
At4g22350.1 68417.m03231 ubiquitin carboxyl-terminal hydrolase f... 28 5.1
At4g22290.1 68417.m03224 ubiquitin carboxyl-terminal hydrolase f... 28 5.1
At5g65390.1 68418.m08224 arabinogalactan-protein (AGP7) 28 6.7
At5g58210.3 68418.m07288 hydroxyproline-rich glycoprotein family... 28 6.7
At5g58210.2 68418.m07287 hydroxyproline-rich glycoprotein family... 28 6.7
At5g58210.1 68418.m07286 hydroxyproline-rich glycoprotein family... 28 6.7
At5g26990.1 68418.m03220 drought-responsive family protein non-c... 28 6.7
At5g04390.1 68418.m00431 zinc finger (C2H2 type) family protein ... 28 6.7
At4g01020.1 68417.m00137 helicase domain-containing protein / IB... 28 6.7
At2g41835.1 68415.m05170 zinc finger (C2H2 type, AN1-like) famil... 28 6.7
At2g28710.1 68415.m03490 zinc finger (C2H2 type) family protein ... 28 6.7
At1g30760.1 68414.m03761 FAD-binding domain-containing protein s... 28 6.7
At1g24625.1 68414.m03099 zinc finger (C2H2 type) family protein ... 28 6.7
At5g07390.1 68418.m00846 respiratory burst oxidase protein A (Rb... 27 8.9
At4g25610.1 68417.m03689 zinc finger (C2H2 type) family protein ... 27 8.9
At3g04700.1 68416.m00504 expressed protein 27 8.9
At2g47090.1 68415.m05882 zinc finger (C2H2 type) family protein ... 27 8.9
At1g30970.1 68414.m03792 zinc finger (C2H2 type) family protein ... 27 8.9
>At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein
contains Pfam PF00096: Zinc finger, C2H2 type
Length = 387
Score = 59.7 bits (138), Expect = 2e-09
Identities = 39/113 (34%), Positives = 61/113 (53%), Gaps = 10/113 (8%)
Frame = +1
Query: 211 GRDQYAC--KFCGKVF-PAANLTRHLRTHTGEQPYKCKY--CERSFSISSNLQRHVRDIH 375
G QY C + CGK F ++ L RH HTGE+ Y C Y C ++FS+ NL+ H++ H
Sbjct: 104 GERQYVCDQEGCGKKFLDSSKLKRHYLIHTGERNYICTYEGCGKAFSLDFNLRSHMK-TH 162
Query: 376 NKERPFRCPL--CDRCFGQQTNLDRHLKK-HEAE-GGDSPS-SADTERDVRTL 519
++E CP C + + + L H+ HE GG++P + E+ +RT+
Sbjct: 163 SQENYHICPYSGCVKRYAHEYKLKNHVAAYHEKNGGGETPKYTPPAEKVLRTV 215
>At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 412
Score = 55.6 bits (128), Expect = 3e-08
Identities = 32/93 (34%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
Frame = +1
Query: 190 LNSGSRKGRDQYACKFCGKVFPAANLTRHLRTHTGEQP---YKCKY--CERSFSISSNLQ 354
L S R C+ CG N+ RHLRTH + KC+ C +FS +SNLQ
Sbjct: 264 LKSHIRSCHQHINCEICGSKHLKKNIKRHLRTHDEDSSPGEIKCEVEGCSSTFSKASNLQ 323
Query: 355 RHVRDIHNKERPFRC--PLCDRCFGQQTNLDRH 447
+H++ +H+ RPF C P C F + ++H
Sbjct: 324 KHMKAVHDDIRPFVCGFPGCGMRFAYKHVRNKH 356
Score = 49.6 bits (113), Expect = 2e-06
Identities = 30/103 (29%), Positives = 54/103 (52%), Gaps = 8/103 (7%)
Frame = +1
Query: 223 YACKFCGKVFPA-ANLTRHLRTHTGEQPYKCKY--CERSFSISSNLQRHVRDIHNKERPF 393
+ C+ CG F A+L +H+++H+ E+ + C C S+ +L RH+ + +K + F
Sbjct: 66 HTCQECGAEFKKPAHLKQHMQSHSLERSFTCYVDDCAASYRRKDHLNRHL--LTHKGKLF 123
Query: 394 RCPL--CDRCFGQQTNLDRHLKKHEAEGG---DSPSSADTERD 507
+CP C F Q N+ RH+KK+ + D+ D ++D
Sbjct: 124 KCPKENCKSEFSVQGNVGRHVKKYHSNDNRDKDNTGLGDGDKD 166
>At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 324
Score = 55.6 bits (128), Expect = 3e-08
Identities = 32/93 (34%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
Frame = +1
Query: 190 LNSGSRKGRDQYACKFCGKVFPAANLTRHLRTHTGEQP---YKCKY--CERSFSISSNLQ 354
L S R C+ CG N+ RHLRTH + KC+ C +FS +SNLQ
Sbjct: 176 LKSHIRSCHQHINCEICGSKHLKKNIKRHLRTHDEDSSPGEIKCEVEGCSSTFSKASNLQ 235
Query: 355 RHVRDIHNKERPFRC--PLCDRCFGQQTNLDRH 447
+H++ +H+ RPF C P C F + ++H
Sbjct: 236 KHMKAVHDDIRPFVCGFPGCGMRFAYKHVRNKH 268
Score = 37.9 bits (84), Expect = 0.006
Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Frame = +1
Query: 262 NLTRHLRTHTGEQPYKC--KYCERSFSISSNLQRHVRDIHNKE 384
+L RHL TH G+ +KC + C+ FS+ N+ RHV+ H+ +
Sbjct: 22 HLNRHLLTHKGKL-FKCPKENCKSEFSVQGNVGRHVKKYHSND 63
Score = 33.5 bits (73), Expect = 0.14
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Frame = +1
Query: 319 CERSFSISSNLQRHVRDIHNKERPFRCPL--CDRCFGQQTNLDRHLKKHEAEGG---DSP 483
C S+ +L RH+ + +K + F+CP C F Q N+ RH+KK+ + D+
Sbjct: 13 CAASYRRKDHLNRHL--LTHKGKLFKCPKENCKSEFSVQGNVGRHVKKYHSNDNRDKDNT 70
Query: 484 SSADTERD 507
D ++D
Sbjct: 71 GLGDGDKD 78
>At3g48430.1 68416.m05287 zinc finger (C2H2 type) family protein /
transcription factor jumonji (jmj) family protein
contains Pfam domains PF02375: jmjN domain, PF02373: jmjC
domain and PF00096: Zinc finger, C2H2 type
Length = 1354
Score = 46.8 bits (106), Expect = 1e-05
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Frame = +1
Query: 232 KFCGK-VFPAANLTRHLRTHTGEQPYKC--KYCERSFSISSNLQRHVRDIHNKERPFRC- 399
K CGK F L +H R H+ ++P KC K C+ +F + + H+R +H RP+ C
Sbjct: 1265 KGCGKNFFSHKYLVQHQRVHSDDRPLKCPWKGCKMTFKWAWSRTEHIR-VHTGARPYVCA 1323
Query: 400 -PLCDRCFGQQTNLDRHLKK 456
P C + F ++ RH +K
Sbjct: 1324 EPDCGQTFRFVSDFSRHKRK 1343
>At5g04240.1 68418.m00414 zinc finger (C2H2 type) family protein /
transcription factor jumonji (jmj) family protein
contains Pfam domians PF02375: jmjN domain, PF02373: jmjC
domain and PF00096: Zinc finger, C2H2 type
Length = 1327
Score = 43.6 bits (98), Expect = 1e-04
Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Frame = +1
Query: 238 CGKVFPAAN-LTRHLRTHTGEQPYKC--KYCERSFSISSNLQRHVRDIHNKERPFRCPL- 405
CGK F A L H R H E+P++C K C +F H+R +H ERP+ C +
Sbjct: 1245 CGKKFRAHKYLVLHQRVHKDERPFECSWKGCSMTFKWQWARTEHLR-LHTGERPYICKVD 1303
Query: 406 -CDRCFGQQTNLDRHLKK 456
C F ++ RH +K
Sbjct: 1304 GCGLSFRFVSDYSRHRRK 1321
>At3g60580.1 68416.m06777 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 288
Score = 39.5 bits (88), Expect = 0.002
Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
Frame = +1
Query: 181 FRELNSGSRKGRDQYACKFCGKVFPAAN-LTRHLRTHTGEQPYKCKYCERSFSISSNLQR 357
+ ++N + KGR Y C+ CGKVF + L H +H + K +RS + N+
Sbjct: 161 YNKINRATTKGR--YKCETCGKVFKSYQALGGHRASHKKNRVSNNKTEQRSETEYDNVVV 218
Query: 358 HVRDIHNKERPFRCPLCDRCFGQQTNLDRHLKKH 459
+ IH CP+C R F L H + H
Sbjct: 219 VAKRIH------ECPICLRVFASGQALGGHKRSH 246
>At3g29340.1 68416.m03684 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 650
Score = 37.9 bits (84), Expect = 0.006
Identities = 25/98 (25%), Positives = 41/98 (41%), Gaps = 2/98 (2%)
Frame = +1
Query: 208 KGRDQYACKFCGKVFPAAN-LTRHLRTHTGEQPYKCKYCERSFS-ISSNLQRHVRDIHNK 381
+ + + CK CGK F L H R H +P K K ++ FS + + + +
Sbjct: 38 QSKSSHKCKICGKSFECYQALGGHQRIH---RPIKEKLSKQEFSEVYPRKSKLQKRPESS 94
Query: 382 ERPFRCPLCDRCFGQQTNLDRHLKKHEAEGGDSPSSAD 495
+ C +C + FG L H K H + + S+ D
Sbjct: 95 SSCYECKVCGKIFGCYRGLGGHTKLHRSTKRELASTQD 132
>At1g26590.1 68414.m03239 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 361
Score = 35.9 bits (79), Expect = 0.025
Identities = 26/101 (25%), Positives = 44/101 (43%), Gaps = 4/101 (3%)
Frame = +1
Query: 217 DQYACKFCGKVFPAAN-LTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRDIHNKERPF 393
+ + CK+C K FP+ L H+R HT E ++ + ++ + H +++
Sbjct: 7 NSFLCKYCYKTFPSGKALGGHIRIHTNENSVGYNGNKKKRLVDQ--RKMMAQKHKQQQQV 64
Query: 394 RCPLCDRCFGQQTNLDRHLKKH-EAEG--GDSPSSADTERD 507
C C R F L H+ H E + D S +DTE +
Sbjct: 65 GCRECGRVFVSLKALRGHMACHGEVKKMLMDDNSQSDTESE 105
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 295 EQPYKCKYCERSFSISSNLQRHVRDIHNKE 384
E + CKYC ++F L H+R IH E
Sbjct: 6 ENSFLCKYCYKTFPSGKALGGHIR-IHTNE 34
>At3g53820.1 68416.m05946 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 142
Score = 33.9 bits (74), Expect = 0.10
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Frame = +1
Query: 265 LTRHLRTHTGEQ--PYKCKYCERSFSISSNLQRHVRDIHNKER 387
L R + +G Q PY C++CER FS + L H+ +IH K+R
Sbjct: 6 LDRRSYSWSGSQARPYICEFCERGFSNAQALGGHM-NIHRKDR 47
>At3g13810.1 68416.m01744 zinc finger (C2H2 type) family protein
similar to finger protein pcp1 GB:S48856 from [Solanum
tuberosum] contains Pfam domain, PF00096: Zinc finger,
C2H2 type
Length = 513
Score = 33.9 bits (74), Expect = 0.10
Identities = 15/61 (24%), Positives = 30/61 (49%)
Frame = +1
Query: 265 LTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRDIHNKERPFRCPLCDRCFGQQTNLDR 444
+ +H GE+ +KC C + +++ S+ + H + KE +RC C F ++ +
Sbjct: 163 IKKHFCRKHGEKKWKCDKCSKKYAVQSDCKAHSKTCGTKE--YRCD-CGTLFSRRDSFIT 219
Query: 445 H 447
H
Sbjct: 220 H 220
>At1g55110.1 68414.m06294 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 455
Score = 33.9 bits (74), Expect = 0.10
Identities = 14/61 (22%), Positives = 31/61 (50%)
Frame = +1
Query: 265 LTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRDIHNKERPFRCPLCDRCFGQQTNLDR 444
+ +H GE+ +KC+ C + +++ S+ + H + KE ++C C F ++ +
Sbjct: 156 IKKHFFRKHGEKKWKCEKCSKKYAVQSDWKAHAKTCGTKE--YKCD-CGTLFSRRDSFIT 212
Query: 445 H 447
H
Sbjct: 213 H 213
>At2g02080.1 68415.m00144 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 516
Score = 33.5 bits (73), Expect = 0.14
Identities = 15/61 (24%), Positives = 31/61 (50%)
Frame = +1
Query: 265 LTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRDIHNKERPFRCPLCDRCFGQQTNLDR 444
+ +H GE+ +KC+ C + +++ S+ + H + KE +RC C F ++ +
Sbjct: 146 IKKHYYRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTKE--YRCD-CGTIFSRRDSYIT 202
Query: 445 H 447
H
Sbjct: 203 H 203
>At5g03150.1 68418.m00263 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 503
Score = 33.1 bits (72), Expect = 0.18
Identities = 13/61 (21%), Positives = 31/61 (50%)
Frame = +1
Query: 265 LTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRDIHNKERPFRCPLCDRCFGQQTNLDR 444
+ +H GE+ +KC+ C + +++ S+ + H + +E ++C C F ++ +
Sbjct: 146 IKKHYSRKHGEKKWKCEKCSKKYAVQSDWKAHAKTCGTRE--YKCD-CGTLFSRKDSFIT 202
Query: 445 H 447
H
Sbjct: 203 H 203
>At3g45260.1 68416.m04887 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 446
Score = 33.1 bits (72), Expect = 0.18
Identities = 15/61 (24%), Positives = 30/61 (49%)
Frame = +1
Query: 265 LTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRDIHNKERPFRCPLCDRCFGQQTNLDR 444
+ +H GE+ +KC C + +++ S+ + H + KE +RC C F ++ +
Sbjct: 132 IKKHFSRKHGEKKWKCDKCSKKYAVMSDWKAHSKICGTKE--YRCD-CGTLFSRKDSFIT 188
Query: 445 H 447
H
Sbjct: 189 H 189
>At2g02070.1 68415.m00143 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 602
Score = 33.1 bits (72), Expect = 0.18
Identities = 15/61 (24%), Positives = 30/61 (49%)
Frame = +1
Query: 265 LTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRDIHNKERPFRCPLCDRCFGQQTNLDR 444
+ +H GE+ +KC C + +++ S+ + H + KE +RC C F ++ +
Sbjct: 144 IKKHYYRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTKE--YRCD-CGTLFSRRDSFIT 200
Query: 445 H 447
H
Sbjct: 201 H 201
>At1g68360.1 68414.m07808 zinc finger protein-related similar to
zinc finger protein GI:790683 from [Arabidopsis
thaliana]
Length = 244
Score = 33.1 bits (72), Expect = 0.18
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +1
Query: 292 GEQPYKCKYCERSFSISSNLQRHVRDIHNKER 387
GE+ Y+C+YC R F S L H ++ H KER
Sbjct: 69 GERKYECQYCCREFGNSQALGGH-QNAHKKER 99
>At5g60470.1 68418.m07584 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 392
Score = 32.7 bits (71), Expect = 0.24
Identities = 15/61 (24%), Positives = 31/61 (50%)
Frame = +1
Query: 265 LTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRDIHNKERPFRCPLCDRCFGQQTNLDR 444
+ +H GE+ +KC C + +++ S+ + H + ++E FRC C F ++ +
Sbjct: 70 IKKHFSRKHGEKKWKCDKCSKKYAVISDWKAHNKICGSRE--FRCD-CGTLFSRKDSFIS 126
Query: 445 H 447
H
Sbjct: 127 H 127
>At1g14580.1 68414.m01734 zinc finger (C2H2 type) family protein
similar to zinc finger protein ID1 GB:AAC18941
GI:3170601 from [Zea mays] contains Pfam domain,
PF00096: Zinc finger, C2H2 type
Length = 467
Score = 32.7 bits (71), Expect = 0.24
Identities = 15/61 (24%), Positives = 30/61 (49%)
Frame = +1
Query: 265 LTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRDIHNKERPFRCPLCDRCFGQQTNLDR 444
+ +H GE+ +KC C + +++ S+ + H + KE +RC C F ++ +
Sbjct: 145 IKKHYYRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTKE--YRCD-CGTIFSRRDSYIT 201
Query: 445 H 447
H
Sbjct: 202 H 202
>At5g66730.1 68418.m08412 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 500
Score = 32.3 bits (70), Expect = 0.31
Identities = 14/61 (22%), Positives = 31/61 (50%)
Frame = +1
Query: 265 LTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRDIHNKERPFRCPLCDRCFGQQTNLDR 444
+ +H GE+ +KC+ C + +++ S+ + H + KE ++C C F ++ +
Sbjct: 124 IKKHFCRKHGEKKWKCEKCSKKYAVQSDWKAHSKICGTKE--YKCD-CGTLFSRRDSFIT 180
Query: 445 H 447
H
Sbjct: 181 H 181
>At5g05120.1 68418.m00543 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 201
Score = 32.3 bits (70), Expect = 0.31
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 295 EQP-YKCKYCERSFSISSNLQRHVRDIHNKER 387
E P YKCKYC R F + L H ++ H KER
Sbjct: 23 ENPIYKCKYCPRKFDKTQALGGH-QNAHRKER 53
>At1g26610.1 68414.m03241 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 455
Score = 32.3 bits (70), Expect = 0.31
Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +1
Query: 220 QYACKFCGKVFPAA-NLTRHLRTHTGE 297
++ CKFC K FP +L H+RTH E
Sbjct: 8 KFVCKFCSKRFPCGKSLGGHIRTHMNE 34
Score = 27.5 bits (58), Expect = 8.9
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +1
Query: 379 KERPFRCPLCDRCFGQQTNLDRHLKKHEAEGGDSPSSADTERD 507
KER F C C + F +L H++ H E +SAD++ D
Sbjct: 5 KERKFVCKFCSKRFPCGKSLGGHIRTHMNE-----NSADSDED 42
>At1g03840.1 68414.m00365 zinc finger (C2H2 type) family protein
contains Zinc finger,C2H2 type,domain contains Pfam
domain, PF00096: Zinc finger, C2H2 type
Length = 506
Score = 32.3 bits (70), Expect = 0.31
Identities = 14/61 (22%), Positives = 31/61 (50%)
Frame = +1
Query: 265 LTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRDIHNKERPFRCPLCDRCFGQQTNLDR 444
+ +H GE+ +KC+ C + +++ S+ + H + +E +RC C F ++ +
Sbjct: 133 IKKHFCRKHGEKKWKCEKCAKRYAVQSDWKAHSKTCGTRE--YRCD-CGTIFSRRDSFIT 189
Query: 445 H 447
H
Sbjct: 190 H 190
>At3g62240.1 68416.m06992 zinc finger (C2H2 type) family protein
contains Pfam PF00096: Zinc finger, C2H2 type
Length = 812
Score = 31.9 bits (69), Expect = 0.41
Identities = 24/84 (28%), Positives = 35/84 (41%), Gaps = 5/84 (5%)
Frame = +1
Query: 229 CKFCGKVFPAANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRD--IHNKERPFRCP 402
C+FC F N L TH + Y C C+RS ++ D IH + F C
Sbjct: 200 CEFCRNPFYGDN---ELYTHMSTEHYTCHLCQRSQPGQYEYYKNYDDLEIHFRRDHFLCE 256
Query: 403 LCDRCFGQQTNL---DRHLKKHEA 465
D C ++ + + LK+H A
Sbjct: 257 -DDSCLAKKFTVFQNESELKRHNA 279
>At2g45120.1 68415.m05615 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 314
Score = 31.9 bits (69), Expect = 0.41
Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
Frame = +1
Query: 202 SRKGRDQYACKFCGKVFPAAN-LTRHLRTHTGEQPYKCKYC-ERSFSISSNLQRHVRDIH 375
S K R ++ C+ CGKVF + L H +H K K C ++ + + V++
Sbjct: 187 SSKSRGRFKCETCGKVFKSYQALGGHRASHK-----KNKACMTKTEQVETEYVLGVKE-- 239
Query: 376 NKERPFRCPLCDRCFGQQTNLDRHLKKHEAEGG 474
++ CP+C R F L H + H + G
Sbjct: 240 --KKVHECPICFRVFTSGQALGGHKRSHGSNIG 270
>At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 452
Score = 31.5 bits (68), Expect = 0.54
Identities = 14/61 (22%), Positives = 30/61 (49%)
Frame = +1
Query: 265 LTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRDIHNKERPFRCPLCDRCFGQQTNLDR 444
+ +H GE+ +KC C + +++ S+ + H + KE ++C C F ++ +
Sbjct: 126 IKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKICGTKE--YKCD-CGTLFSRRDSFIT 182
Query: 445 H 447
H
Sbjct: 183 H 183
>At4g02670.1 68417.m00362 zinc finger (C2H2 type) family protein
similar to potato PCP1 zinc finger protein, GenBank
accession number X82328 contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 402
Score = 31.1 bits (67), Expect = 0.72
Identities = 20/98 (20%), Positives = 42/98 (42%), Gaps = 8/98 (8%)
Frame = +1
Query: 178 KFRELNSGSRKGRDQYACKF--CGKVFPA------ANLTRHLRTHTGEQPYKCKYCERSF 333
K ++ N+ ++ + Y C C P+ + +H GE+ +KC+ C + +
Sbjct: 109 KLKQKNTKEQQKKKVYVCPETNCAHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKFY 168
Query: 334 SISSNLQRHVRDIHNKERPFRCPLCDRCFGQQTNLDRH 447
++ S+ + H + R +RC C F ++ H
Sbjct: 169 AVQSDWKAHTKICGT--RDYRCD-CGTLFSRKDTFITH 203
>At3g49930.1 68416.m05460 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 215
Score = 31.1 bits (67), Expect = 0.72
Identities = 22/92 (23%), Positives = 38/92 (41%), Gaps = 1/92 (1%)
Frame = +1
Query: 223 YACKFCGKVFPAAN-LTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRDIHNKERPFRC 399
Y C CGK FP+ L H +H +P + ++++N + + C
Sbjct: 94 YKCSVCGKSFPSYQALGGHKTSH--RKPVSVDVNNSNGTVTNNGNISNGLVGQSGKTHNC 151
Query: 400 PLCDRCFGQQTNLDRHLKKHEAEGGDSPSSAD 495
+C + F L H + H +GG+ S+ D
Sbjct: 152 SICFKSFPSGQALGGHKRCH-YDGGNGNSNGD 182
>At1g09920.1 68414.m01116 TRAF-type zinc finger-related contains
Pfam PF02176: TRAF-type zinc finger; similar to TNF
receptor associated factor 4 (GI:7274404) [Mus musculus]
(GI:7274404); similar to Cysteine rich motif Associated
to Ring and Traf domains protein (mCART1)(GI:1041446)
[Mus musculus]
Length = 192
Score = 31.1 bits (67), Expect = 0.72
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Frame = +1
Query: 214 RDQYACKFCGKVFPAANLTRH-LRTHTGEQPYKCKYCERSFSISSNLQRHVRDIHNKE-R 387
R+ CK CG + P + H L TH P C C+ + ++R + D H E
Sbjct: 33 RNLEKCKICGDMVPKKHAEEHYLNTHA---PIACSMCKET------IEREIFDSHKGEIC 83
Query: 388 PFRCPLCDRC 417
P R C+ C
Sbjct: 84 PKRIVTCEFC 93
>At5g10970.1 68418.m01275 zinc finger (C2H2 type) family protein
contains zinc finger, C2H2 type domain, Prosite:PS00028
Length = 272
Score = 30.7 bits (66), Expect = 0.95
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +1
Query: 229 CKFCGKVFPAANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRDIHNKER 387
C G V P+ N + T T ++ + C YC+R+F S L H ++ H +ER
Sbjct: 83 CLETGVVTPSFNGS----TSTEQKLFSCNYCQRTFYSSQALGGH-QNAHKRER 130
>At2g34790.1 68415.m04272 FAD-binding domain-containing protein
similar to SP|P30986 reticuline oxidase precursor
(Berberine-bridge-forming enzyme) (BBE)
(Tetrahydroprotoberberine synthase) [Eschscholzia
californica]; contains PF01565 FAD binding domain
Length = 532
Score = 30.7 bits (66), Expect = 0.95
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = -2
Query: 634 YVKELLDLEGSEGFWERYVE 575
+VKE + +EG EG WER++E
Sbjct: 383 FVKEPIPVEGLEGLWERFLE 402
>At5g25160.1 68418.m02983 zinc finger (C2H2 type) family protein
(ZFP3) identical to zinc finger protein, ZFP3
gi|790677|gb|AAA87299; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 235
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +1
Query: 283 THTGEQPYKCKYCERSFSISSNLQRHVRDIHNKER 387
T T ++ + C YC+R+F S L H ++ H +ER
Sbjct: 54 TSTEQKLFSCNYCQRTFYSSQALGGH-QNAHKRER 87
>At4g32600.1 68417.m04642 zinc finger (C3HC4-type RING finger)
family protein low similarity to RING finger protein 38
[Homo sapiens] GI:21666412; contains Pfam profile
PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 453
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = -2
Query: 454 SSNADRGLSAARSTYRRADTGKVAPCCECLSRVA 353
SS ++ G+ AA + RA +G+ A CC CL++ A
Sbjct: 338 SSTSEGGVVAAGTDNERAISGEDAVCCICLAKYA 371
>At4g12240.1 68417.m01941 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 364
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +1
Query: 298 QPYKCKYCERSFSISSNLQRHVRDIHNKERPFR 396
+PY C C+R F + L H + IH E R
Sbjct: 115 EPYFCGVCDRRFYTNEKLINHFKQIHETENQKR 147
>At3g20880.1 68416.m02640 zinc finger (C2H2 type) protein (WIP4)
identical to WIP4 protein [Arabidopsis thaliana]
gi|18376500|emb|CAC86168; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 412
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +1
Query: 391 FRCPLCDRCFGQQTNLDRHLKKHEAEGGDSPSSADTERDVRTLMISVPSW 540
F CPLC + F + N+ H+ H ++ P S + T M+ +P +
Sbjct: 256 FSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQP--TAMLKLPCY 303
Score = 27.9 bits (59), Expect = 6.7
Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Frame = +1
Query: 181 FRELNSGSRK--GRDQYACKFCGKVFPAANLTRHLRTHTGEQPYKCKYCERSFSISSNLQ 354
FR L + ++ G +AC+ CGK F R + G+ Y C C F +L+
Sbjct: 324 FRTLQTHYKRKHGVRPFACRRCGKAFAVKGDWRTHEKNCGKLWY-CS-CGSDFKHKRSLK 381
Query: 355 RHVRDIHNKERP 390
HV+ N P
Sbjct: 382 DHVKAFGNGHVP 393
>At3g16560.1 68416.m02116 protein phosphatase 2C-related /
PP2C-related contains protein phosphatase 2C domain
Length = 493
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 215 GISTPASSAGRFSPQPT*PDICALTPVSSPTNVN 316
G S + SP P P+ C LT +SSP++VN
Sbjct: 108 GSMVSLSCSSSTSPSPPEPESCYLTSMSSPSSVN 141
>At1g51220.1 68414.m05761 zinc finger (C2H2 type) protein (WIP5)
identical to WIP5 protein [Arabidopsis thaliana]
gi|18376498|emb|CAC86167; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 337
Score = 30.3 bits (65), Expect = 1.3
Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Frame = +1
Query: 181 FRELNSGSRK--GRDQYACKFCGKVFPAANLTRHLRTHTGEQPYKCKYCERSFSISSNLQ 354
FR L + ++ G +AC+ CGK F R + G+ Y C C F +L+
Sbjct: 246 FRTLQTHYKRKHGSKPFACRMCGKAFAVKGDWRTHEKNCGKLWY-CS-CGSDFKHKRSLK 303
Query: 355 RHVRDIHNKERP 390
HV+ N P
Sbjct: 304 DHVKAFGNGHVP 315
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +1
Query: 391 FRCPLCDRCFGQQTNLDRHLKKHEAEGGDSPSS 489
F CPLC + F + N+ H+ H ++ P S
Sbjct: 178 FTCPLCFKTFNRYNNMQMHMWGHGSQYRKGPES 210
>At5g52010.1 68418.m06454 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 396
Score = 29.9 bits (64), Expect = 1.7
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +1
Query: 301 PYKCKYCERSFSISSNLQRHVRDIHNKER 387
PY C C R + +L++H + +H +ER
Sbjct: 151 PYICGVCGRKCKTNLDLKKHFKQLHERER 179
>At5g24810.1 68418.m02930 ABC1 family protein contains Pfam domain,
PF03109: ABC1 family
Length = 1009
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/39 (46%), Positives = 22/39 (56%)
Frame = +2
Query: 206 GRVGISTPASSAGRFSPQPT*PDICALTPVSSPTNVNTA 322
G+V I T A GR+ P+P PD +L PV S T TA
Sbjct: 551 GKVIIDTAAGVLGRYDPRPVQPD--SLFPVFSVTKGVTA 587
>At5g06070.1 68418.m00673 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 226
Score = 29.9 bits (64), Expect = 1.7
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = +1
Query: 151 PDRQQSAYAKFRELNSGS--RKGRDQYACKFCGKVFPAAN-LTRHLRTHTGEQPYKCKYC 321
P R++ A+A E G Y+C FCG+ F +A L H+ H + + +
Sbjct: 29 PFREERAFASAEEYGGGGGCMWPPRSYSCSFCGREFKSAQALGGHMNVHRRD---RARLK 85
Query: 322 ERSFSISSNLQ 354
++S S SS Q
Sbjct: 86 QQSLSPSSTDQ 96
>At2g31270.1 68415.m03818 hydroxyproline-rich glycoprotein family
protein
Length = 571
Score = 29.9 bits (64), Expect = 1.7
Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
Frame = +2
Query: 143 PTDRTGNRAPTPSSEN*TPARGRVG----ISTPASSAGRFSPQPT*PDICALTPVSSPTN 310
PT N APTP+ TPA+ + + TP + P+ P I TPV + T
Sbjct: 295 PTSSQINIAPTPTKPTSTPAKQTLSEINILPTPVKPVSTLAKFPSTPAIIDSTPVITATP 354
Query: 311 VNTAS 325
AS
Sbjct: 355 PEFAS 359
>At1g08290.1 68414.m00915 zinc finger (C2H2 type) protein (WIP3)
identical to WIP3 protein [Arabidopsis thaliana]
gi|18027014|gb|AAL55723; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 337
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Frame = +1
Query: 319 CERSFSISSNLQRHVRDIHNKERPFRCPLCDRCFGQQTNLDRHLKKHEAE---GGDS 480
C + F I S Q HV + F C +C + F + N+ H+ H +E G DS
Sbjct: 161 CGKRFWIPSPAQIHVGPMQ-----FACSICSKTFNRYNNMQMHMWGHGSEFRKGADS 212
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +1
Query: 238 CGKVFPAANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHV 363
CGK F + + H G + C C ++F+ +N+Q H+
Sbjct: 161 CGKRFW---IPSPAQIHVGPMQFACSICSKTFNRYNNMQMHM 199
>At5g63280.1 68418.m07942 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 271
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = +1
Query: 214 RDQYACKFCGKVFPAANLTR---HLRTHTGEQPYKCKYCERSFSISSNLQRHVRDIH 375
R++Y ++ P +L R H + H +KC YC++SF+ L +H H
Sbjct: 72 RERYEIPKNCRLHPDNDLYRDQEHHKVHVDVFEWKCGYCKKSFNDEKFLDKHFSTRH 128
>At5g20870.1 68418.m02478 glycosyl hydrolase family 17 protein
similar to elicitor inducible chitinase Nt-SubE76
GI:11071974 [Nicotiana tabacum]
Length = 501
Score = 29.5 bits (63), Expect = 2.2
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +1
Query: 355 RHVRDIHNKERPFRCPLCDRCFGQQTNLDRHLKKHEAEGGDS-PSSADTERDVRTLMISV 531
R VR + + + L G+Q + L E D PSS D D++TLMIS+
Sbjct: 134 RFVRSTYPALQNVQAALVKAGLGRQVKVTVPLNADVYESSDGLPSSGDFRSDIKTLMISI 193
>At5g06650.1 68418.m00751 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 191
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1
Query: 295 EQPYKCKYCERSFSISSNLQRHVRDIHNKER 387
E+ +KC YC R+F S L H ++ H +ER
Sbjct: 52 EKRFKCHYCFRNFPTSQALGGH-QNAHKRER 81
>At3g53600.1 68416.m05920 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 175
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +1
Query: 376 NKERPF-RCPLCDRCFGQQTNLDRHLKKH 459
NKE +C +CD+ FG L H++KH
Sbjct: 87 NKENDMHKCTICDQMFGTGQALGGHMRKH 115
>At1g55700.1 68414.m06378 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 679
Score = 29.5 bits (63), Expect = 2.2
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +1
Query: 367 DIHNKERPFRCPLCDRCFGQQTNLDRHLKKH 459
++ +R + CP C+ C+ + NL H +H
Sbjct: 101 EVSENDRSYHCPTCEMCYHKVCNLYPHEIRH 131
>At1g49900.1 68414.m05596 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 917
Score = 29.5 bits (63), Expect = 2.2
Identities = 20/87 (22%), Positives = 33/87 (37%), Gaps = 1/87 (1%)
Frame = +1
Query: 271 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRDIHNKERPFRCPLCDRCFGQQTNLDRHL 450
RH +T T +P + + LQ + K F+C +C++ F L H
Sbjct: 153 RHPQTQTLTRPQPQTHKTQLQRPPPQLQSQTQTAPPKSDLFKCSICEKVFTSYQALGGHK 212
Query: 451 KKHEAEGGD-SPSSADTERDVRTLMIS 528
H + + AD R+ M+S
Sbjct: 213 ASHSIKAAQLENAGADAGEKTRSKMLS 239
>At1g67030.1 68414.m07622 zinc finger (C2H2 type) family protein
(ZFP6) identical to zinc finger protein, ZFP6
gi|790683|gb|AAA87302; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 197
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +1
Query: 304 YKCKYCERSFSISSNLQRHVRDIHNKER 387
Y+C+YC R F+ S L H ++ H KER
Sbjct: 41 YECQYCCREFANSQALGGH-QNAHKKER 67
>At1g18560.1 68414.m02315 hAT dimerisation domain-containing protein
/ BED zinc finger domain-containing protein /
transposase-related weak similarity to Tam3-transposase
[Antirrhinum majus] GI:16064; contains Pfam profiles
PF02892: BED zinc finger, PF05699: hAT family
dimerisation domain
Length = 676
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = +1
Query: 271 RHLRTHTGEQPYKCKYCERSFSISS---NLQRHVRDIH 375
++ T + KCK+C +S+SI++ NL RH+ + H
Sbjct: 45 KYFETAPDSKTRKCKFCGQSYSIATATGNLGRHLTNRH 82
>At3g57670.1 68416.m06425 zinc finger (C2H2 type) protein (WIP2)
identical to WIP2 protein [Arabidopsis thaliana]
gi|18027012|gb|AAL55722; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 383
Score = 28.7 bits (61), Expect = 3.8
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +1
Query: 391 FRCPLCDRCFGQQTNLDRHLKKHEAEGGDSPSS 489
F CP+C + F + N+ H+ H ++ P S
Sbjct: 217 FSCPVCFKTFNRYNNMQMHMWGHGSQYRKGPES 249
>At3g05700.1 68416.m00637 drought-responsive family protein contains
similarity to drought-induced mRNA, Di19 [Arabidopsis
thaliana] gi|469110|emb|CAA55321
Length = 181
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +1
Query: 151 PDRQQSAYAKFRELNSGSRKGRDQYACKFCGKVFPAANLTRHL 279
P R + + F E++ G + R+++AC FC F +L H+
Sbjct: 22 PSRSDT-FLGFEEID-GEEEFREEFACPFCSDYFDIVSLCCHI 62
>At3g46070.1 68416.m04985 zinc finger (C2H2 type) family protein
contains zinc finger, C2H2 type, domain, PROSITE:PS00028
Length = 170
Score = 23.4 bits (48), Expect(2) = 5.0
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +1
Query: 304 YKCKYCERSFSISSNLQRHVRDIHNK 381
++CK CER F L H R H+K
Sbjct: 36 FRCKTCERDFDSFQALGGH-RASHSK 60
Score = 23.4 bits (48), Expect(2) = 5.0
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +1
Query: 397 CPLCDRCFGQQTNLDRHLKKHEAE 468
CP+C F L H++KH E
Sbjct: 88 CPICGLEFPMGQALGGHMRKHRNE 111
>At5g49030.1 68418.m06067 tRNA synthetase class I (I, L, M and V)
family protein similar to SP|P41972 Isoleucyl-tRNA
synthetase (EC 6.1.1.5) (Isoleucine--tRNA ligase)
(IleRS) {Staphylococcus aureus}; contains Pfam profile
PF00133: tRNA synthetases class I (I, L, M and V)
Length = 1093
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/38 (28%), Positives = 23/38 (60%)
Frame = -2
Query: 688 SLYYIGTLQQVLVEVNI*YVKELLDLEGSEGFWERYVE 575
+ Y++ T + ++ E I +VK ++ +GS+ +W VE
Sbjct: 595 AFYHVKTKEPLMNEETINHVKSIISQKGSDAWWYMSVE 632
>At4g22410.1 68417.m03238 ubiquitin carboxyl-terminal hydrolase
family protein similar to U4/U6.U5 tri-snRNP-associated
65 kDa protein [Homo sapiens] GI:13926071; contains Pfam
profile PF00443: Ubiquitin carboxyl-terminal hydrolase
Length = 340
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = +1
Query: 181 FRELNSGSRKGRDQYACKFCGKVFPAANLTRHLRTHTGE 297
F S S + YAC CGK F + H TH+ E
Sbjct: 11 FERFCSVSLSNLNVYACLVCGKYFQGRSQKSHAYTHSLE 49
>At4g22350.1 68417.m03231 ubiquitin carboxyl-terminal hydrolase
family protein similar to U4/U6.U5 tri-snRNP-associated
65 kDa protein [Homo sapiens] GI:13926071; contains Pfam
profile PF00443: Ubiquitin carboxyl-terminal hydrolase
Length = 510
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = +1
Query: 181 FRELNSGSRKGRDQYACKFCGKVFPAANLTRHLRTHTGE 297
F S S + YAC CGK F + H TH+ E
Sbjct: 95 FERFCSVSLSNLNVYACLVCGKYFQGRSQKSHAYTHSLE 133
>At4g22290.1 68417.m03224 ubiquitin carboxyl-terminal hydrolase
family protein similar to pVHL-interacting
deubiquitinating enzyme 1 type II [Homo sapiens]
GI:18698435; contains Pfam profile PF00443: Ubiquitin
carboxyl-terminal hydrolase
Length = 974
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = +1
Query: 181 FRELNSGSRKGRDQYACKFCGKVFPAANLTRHLRTHTGE 297
F S S + YAC CGK F + H TH+ E
Sbjct: 557 FERFCSVSLSNLNVYACLVCGKYFQGRSQKSHAYTHSLE 595
>At5g65390.1 68418.m08224 arabinogalactan-protein (AGP7)
Length = 130
Score = 27.9 bits (59), Expect = 6.7
Identities = 19/57 (33%), Positives = 26/57 (45%)
Frame = +2
Query: 140 APTDRTGNRAPTPSSEN*TPARGRVGISTPASSAGRFSPQPT*PDICALTPVSSPTN 310
APT + AP+PSS+ P P S G +P P+ D A P ++ TN
Sbjct: 59 APTSSPPSSAPSPSSD--APTASPPAPEGPGVSPGELAPTPS--DASAPPPNAALTN 111
>At5g58210.3 68418.m07288 hydroxyproline-rich glycoprotein family
protein
Length = 380
Score = 27.9 bits (59), Expect = 6.7
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +2
Query: 143 PTDRTGNRAPTPSSEN*TPARGRVGISTPASSAGRFSPQPT-*PDICALTPVSSPTNVNT 319
P D + + +P+P A V S PA ++ FSP P + AL+ VS +T
Sbjct: 148 PADASSHLSPSPVPIVEAKALSEVSPSVPADTSSHFSPAPVPIVEAEALSVVSPSVPADT 207
Query: 320 AS 325
+S
Sbjct: 208 SS 209
>At5g58210.2 68418.m07287 hydroxyproline-rich glycoprotein family
protein
Length = 380
Score = 27.9 bits (59), Expect = 6.7
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +2
Query: 143 PTDRTGNRAPTPSSEN*TPARGRVGISTPASSAGRFSPQPT-*PDICALTPVSSPTNVNT 319
P D + + +P+P A V S PA ++ FSP P + AL+ VS +T
Sbjct: 148 PADASSHLSPSPVPIVEAKALSEVSPSVPADTSSHFSPAPVPIVEAEALSVVSPSVPADT 207
Query: 320 AS 325
+S
Sbjct: 208 SS 209
>At5g58210.1 68418.m07286 hydroxyproline-rich glycoprotein family
protein
Length = 380
Score = 27.9 bits (59), Expect = 6.7
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +2
Query: 143 PTDRTGNRAPTPSSEN*TPARGRVGISTPASSAGRFSPQPT-*PDICALTPVSSPTNVNT 319
P D + + +P+P A V S PA ++ FSP P + AL+ VS +T
Sbjct: 148 PADASSHLSPSPVPIVEAKALSEVSPSVPADTSSHFSPAPVPIVEAEALSVVSPSVPADT 207
Query: 320 AS 325
+S
Sbjct: 208 SS 209
>At5g26990.1 68418.m03220 drought-responsive family protein
non-consensus AT donor splice site at exon 3, AC
acceptor splice site at exon 4; similar to
drought-induced mRNA, Di19 [Arabidopsis thaliana]
gi|469110|emb|CAA55321
Length = 222
Score = 27.9 bits (59), Expect = 6.7
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = +1
Query: 181 FRELNSGSRKGRDQYACKFCGKVFPAANLTRHL-RTHTGE-QPYKCKYCERSFSISSNLQ 354
F E+ G R++YAC FC F +L H+ H + + C C + +SS++
Sbjct: 31 FEEIE-GEDDFREEYACPFCSDYFDIVSLCCHIDEDHPMDAKNGVCPIC--AVKVSSDMI 87
Query: 355 RHV 363
H+
Sbjct: 88 AHI 90
>At5g04390.1 68418.m00431 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 362
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = +1
Query: 193 NSGSRKGRDQYACKFCGKVFPAAN-LTRHLRTH 288
NSG + G Y CK C + FP+ L H +H
Sbjct: 143 NSGGKAGYYVYQCKTCDRTFPSFQALGGHRASH 175
>At4g01020.1 68417.m00137 helicase domain-containing protein / IBR
domain-containing protein / zinc finger protein-related
similar to SP|Q14562 ATP-dependent helicase DDX8 (RNA
helicase HRH1) (DEAH-box protein 8) {Homo sapiens};
contains Pfam profiles PF04408: Helicase associated
domain (HA2), PF00271: Helicase conserved C-terminal
domain, PF00097: Zinc finger, C3HC4 type (RING finger),
PF01485: IBR domain
Length = 1787
Score = 27.9 bits (59), Expect = 6.7
Identities = 20/72 (27%), Positives = 29/72 (40%), Gaps = 4/72 (5%)
Frame = +1
Query: 172 YAKFRELNSGS----RKGRDQYACKFCGKVFPAANLTRHLRTHTGEQPYKCKYCERSFSI 339
Y KF+E S KG+D C C + HL+ G+ + C C F+
Sbjct: 1696 YKKFKENPDLSLKDWAKGKDVKECPICKSTIEKTDGCNHLQCRCGK--HICWTCLDVFTQ 1753
Query: 340 SSNLQRHVRDIH 375
+ H+R IH
Sbjct: 1754 AEPCYAHLRTIH 1765
>At2g41835.1 68415.m05170 zinc finger (C2H2 type, AN1-like) family
protein contains Pfam domain, PF00096: Zinc finger, C2H2
type; contains Pfam domain, PF01428: AN1-like Zinc
finger
Length = 279
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/57 (26%), Positives = 23/57 (40%), Gaps = 8/57 (14%)
Frame = +1
Query: 310 CKYCERSFSISSNLQRHVRDIHNKERPFR--------CPLCDRCFGQQTNLDRHLKK 456
C C FS ++L HV H + + CP C R F +L H+++
Sbjct: 215 CPQCGAKFSSVTSLVEHVEKTHERNKKQNHGNVTVDVCPRCSRGFRDPVDLVNHIER 271
>At2g28710.1 68415.m03490 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 156
Score = 27.9 bits (59), Expect = 6.7
Identities = 23/87 (26%), Positives = 34/87 (39%), Gaps = 3/87 (3%)
Frame = +1
Query: 223 YACKFCGKVFPAAN-LTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRDIHNKERPFR- 396
+ACK C K FP+ L H +H S+ L+ H + +P +
Sbjct: 34 FACKTCNKEFPSFQALGGHRASHRR---------------SAALEGHAPPSPKRVKPVKH 78
Query: 397 -CPLCDRCFGQQTNLDRHLKKHEAEGG 474
CP+C F L H++KH G
Sbjct: 79 ECPICGAEFAVGQALGGHMRKHRGGSG 105
>At1g30760.1 68414.m03761 FAD-binding domain-containing protein
similar to SP|P30986 reticuline oxidase precursor
(Berberine-bridge-forming enzyme) (BBE)
(Tetrahydroprotoberberine synthase) [Eschscholzia
californica]; contains PF01565 FAD binding domain
Length = 534
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -2
Query: 634 YVKELLDLEGSEGFWERYVE 575
YV+E + +EG EG WE+ +E
Sbjct: 385 YVEEPIPVEGLEGLWEKLLE 404
>At1g24625.1 68414.m03099 zinc finger (C2H2 type) family protein
(ZFP7) identical to zinc finger protein, ZFP7
gi|790685|gb|AAA87303; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 209
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +1
Query: 268 TRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRDIHNKER 387
T+ + + + C YC R F S L H ++ H +ER
Sbjct: 47 TKSTKCEANPRVFSCNYCRRKFYSSQALGGH-QNAHKRER 85
>At5g07390.1 68418.m00846 respiratory burst oxidase protein A
(RbohA) / NADPH oxidase identical to respiratory burst
oxidase protein A from Arabidopsis thaliana [gi:3242781]
Length = 902
Score = 27.5 bits (58), Expect = 8.9
Identities = 10/37 (27%), Positives = 22/37 (59%)
Frame = -2
Query: 412 YRRADTGKVAPCCECLSRVAADSMRLKTSARSIYICR 302
YR+ +V C C+++ AA++++L + + +CR
Sbjct: 366 YRKRSAYEVMGVCVCIAKGAAETLKLNMAMILLPVCR 402
>At4g25610.1 68417.m03689 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 586
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 298 QPYKCKYCERSFSISSNLQRHVRDIHNKER 387
Q KC+ C R F N +RH R +H ++R
Sbjct: 59 QMQKCEKCSREFCSPVNFRRHNR-MHRRQR 87
>At3g04700.1 68416.m00504 expressed protein
Length = 191
Score = 27.5 bits (58), Expect = 8.9
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = -2
Query: 562 GGEHVTFPMKERISSKYARLAPYLQN--SVNRRLQPRASSNADRGLSAARSTY 410
G + F E K P L +VNR+L P S ++ R SA+ ST+
Sbjct: 92 GSIELGFGFNEEAGQKLCNTLPALDLYFAVNRQLSPLPSPSSSRSSSASASTF 144
>At2g47090.1 68415.m05882 zinc finger (C2H2 type) family protein
contains Prosite PS00028: Zinc finger, C2H2 type, domain
Length = 745
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +1
Query: 229 CKFCGKVFPAANLTRHLRTHTGEQPYKCKYCER 327
C+FC + F N L TH + Y C C+R
Sbjct: 200 CEFCKRPFYGDN---ELYTHMSREHYTCHICQR 229
>At1g30970.1 68414.m03792 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 367
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = +1
Query: 310 CKYCERSFSISSNLQRHVRDIHNKERPFRCPLCDRCFGQQTNLDRH-LKKHEAEGGDSPS 486
C YC+R F L + H K + F+C +C + + + H L+ H+ P+
Sbjct: 14 CYYCDREFDDEKILVQ-----HQKAKHFKCHVCHKKLSTASGMVIHVLQVHKENVTKVPN 68
Query: 487 SAD 495
+ D
Sbjct: 69 AKD 71
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,296,965
Number of Sequences: 28952
Number of extensions: 304003
Number of successful extensions: 1398
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 1105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1378
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1467502800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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