Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30852
         (524 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    24   0.94 
AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochr...    22   3.8  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   5.0  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   5.0  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.8 bits (49), Expect = 0.94
 Identities = 14/50 (28%), Positives = 26/50 (52%)
 Frame = -2

Query: 523 FFFFFYALRVYSPLHLDIIKECLHSFKVYFHCISFLSRTHGMTTSIYRQS 374
           FF   Y L V+S L   ++++ + +F+     + FLS   G+    YR++
Sbjct: 348 FFPINYTL-VFSVLKQYVMQQQVKNFRHSVRSVFFLSEIFGLVNLKYRET 396


>AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -2

Query: 85  KDLKPVTLETLTMFPLVLIKCGIAN 11
           K L+ V LETL M+P V I   + N
Sbjct: 46  KYLERVLLETLRMYPPVPIITRVIN 70


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 10/33 (30%), Positives = 13/33 (39%)
 Frame = -2

Query: 466 KECLHSFKVYFHCISFLSRTHGMTTSIYRQSGT 368
           KEC   F  +  C  +    HG  T    + GT
Sbjct: 476 KECKQDFMPHELCDKYYRCVHGKPTEFACRPGT 508


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -1

Query: 59  NVDDVSFSFNQMRNCQ 12
           ++ +V FSFN +RN Q
Sbjct: 93  DLTEVYFSFNSVRNVQ 108


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,001
Number of Sequences: 336
Number of extensions: 2561
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12678017
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)