Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30852
(524 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12716| Best HMM Match : E3_binding (HMM E-Value=9.7) 55 3e-08
SB_15764| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 7e-08
SB_23903| Best HMM Match : adh_short (HMM E-Value=7.3e-34) 54 1e-07
SB_13156| Best HMM Match : adh_short (HMM E-Value=0.00022) 51 5e-07
SB_50727| Best HMM Match : adh_short (HMM E-Value=8.9e-08) 51 7e-07
SB_8926| Best HMM Match : adh_short (HMM E-Value=1.5e-15) 50 1e-06
SB_27289| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06
SB_9273| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 5e-06
SB_58732| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 6e-06
SB_9401| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 6e-06
SB_26576| Best HMM Match : LMWPc (HMM E-Value=5.60519e-45) 47 1e-05
SB_3252| Best HMM Match : adh_short (HMM E-Value=4.8e-10) 47 1e-05
SB_6559| Best HMM Match : adh_short (HMM E-Value=4.3) 43 2e-04
SB_27292| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_39007| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 7e-04
SB_32367| Best HMM Match : adh_short (HMM E-Value=1.7e-07) 40 0.001
SB_38785| Best HMM Match : adh_short (HMM E-Value=2.4e-06) 39 0.003
SB_44869| Best HMM Match : adh_short (HMM E-Value=5.4e-23) 38 0.005
SB_34916| Best HMM Match : adh_short (HMM E-Value=4.8e-06) 38 0.005
SB_43004| Best HMM Match : FAD_binding_4 (HMM E-Value=1.4e-18) 37 0.009
SB_44870| Best HMM Match : adh_short (HMM E-Value=5.4e-11) 37 0.009
SB_39237| Best HMM Match : adh_short (HMM E-Value=1.6e-11) 37 0.012
SB_58583| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.015
SB_26063| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.027
SB_39030| Best HMM Match : adh_short (HMM E-Value=5.5e-34) 31 0.44
SB_28773| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.44
SB_28889| Best HMM Match : ANF_receptor (HMM E-Value=1.1e-34) 31 0.77
SB_28642| Best HMM Match : RVT_1 (HMM E-Value=8.4e-39) 30 1.0
SB_28495| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_8042| Best HMM Match : DUF803 (HMM E-Value=0) 29 1.8
SB_43204| Best HMM Match : DnaB (HMM E-Value=2.8) 29 2.3
SB_33399| Best HMM Match : Ank (HMM E-Value=0) 29 3.1
SB_47084| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_26483| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_4593| Best HMM Match : Ion_trans (HMM E-Value=2.9e-40) 28 5.4
SB_20643| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_14553| Best HMM Match : adh_short (HMM E-Value=4.2e-08) 27 9.5
>SB_12716| Best HMM Match : E3_binding (HMM E-Value=9.7)
Length = 133
Score = 55.2 bits (127), Expect = 3e-08
Identities = 30/93 (32%), Positives = 53/93 (56%), Gaps = 2/93 (2%)
Frame = +3
Query: 3 LTMLAIPHLIKTKGNIVNVSSVTGLRSFPNVLAYCISKSAIDQFTRCVALEVALKGVRVN 182
+T+ +P + K G +VN+SS+ G S PN Y ++K ++ F+ + EV+ GV+V
Sbjct: 27 VTLTFLPLIRKCGGRVVNISSIAGRLSIPNTGPYSVTKYGVEAFSDALRREVSPWGVKVT 86
Query: 183 AVNPGVIATGLHKK--GEGSMNEEQYKLFWQNA 275
V PG G H + EG++ E++ + W++A
Sbjct: 87 LVEPG----GFHTRFLAEGAL-EKKLQTLWESA 114
>SB_15764| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 54.0 bits (124), Expect = 7e-08
Identities = 29/71 (40%), Positives = 45/71 (63%), Gaps = 2/71 (2%)
Frame = +3
Query: 3 LTMLAIPHLIKT-KGNIVNVSSV-TGLRSFPNVLAYCISKSAIDQFTRCVALEVALKGVR 176
+T IP + + G+I+N++SV + ++ PN AY SK+A+ FT+ +A + KG+R
Sbjct: 122 MTKECIPKMRQQGSGSIINMASVASSIKGAPNRFAYGTSKAAVIGFTKAIAADYITKGIR 181
Query: 177 VNAVNPGVIAT 209
VNAV PG I T
Sbjct: 182 VNAVCPGTIYT 192
Score = 42.3 bits (95), Expect = 2e-04
Identities = 20/34 (58%), Positives = 26/34 (76%)
Frame = +2
Query: 293 GRPGDAKEVSSVIVFLASDAASNITGATLPVDGG 394
GR G +EV++V+VFLASD +S ITG + VDGG
Sbjct: 219 GRFGKPEEVANVVVFLASDESSFITGQCITVDGG 252
>SB_23903| Best HMM Match : adh_short (HMM E-Value=7.3e-34)
Length = 253
Score = 53.6 bits (123), Expect = 1e-07
Identities = 30/63 (47%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +3
Query: 42 GNIVNVSSVTGLRSFPN-VLAYCISKSAIDQFTRCVALEVALKGVRVNAVNPGVIATGLH 218
G IVN+SS P + Y K AID T +A EVA G+RVNAV PGVI T +H
Sbjct: 141 GAIVNLSSAAARLGAPGEYIDYAAVKGAIDSMTLGLAKEVAADGIRVNAVRPGVIETEIH 200
Query: 219 KKG 227
G
Sbjct: 201 ASG 203
Score = 41.5 bits (93), Expect = 4e-04
Identities = 20/45 (44%), Positives = 32/45 (71%)
Frame = +2
Query: 263 LAKCAETHALGRPGDAKEVSSVIVFLASDAASNITGATLPVDGGR 397
+A+ +++ +GR G A+EV+ I++LAS+ AS +GA L V GGR
Sbjct: 209 VARVSQSVPMGRGGLAREVAEAILWLASEQASYTSGALLDVSGGR 253
>SB_13156| Best HMM Match : adh_short (HMM E-Value=0.00022)
Length = 233
Score = 51.2 bits (117), Expect = 5e-07
Identities = 32/101 (31%), Positives = 47/101 (46%)
Frame = +3
Query: 3 LTMLAIPHLIKTKGNIVNVSSVTGLRSFPNVLAYCISKSAIDQFTRCVALEVALKGVRVN 182
+T +P L + KG +VN+SSV G+ AYCISK + F+ + E++ GV V
Sbjct: 75 MTKAFLPLLKREKGRVVNISSVAGMVPLQRSSAYCISKFGVSVFSDALRREMSPWGVGVV 134
Query: 183 AVNPGVIATGLHKKGEGSMNEEQYKLFWQNAQRPTLSADLG 305
V PG T + + +E K W PT + G
Sbjct: 135 LVEPGAFKT---QATDPKATKENIKGLWDRLD-PTTREEYG 171
>SB_50727| Best HMM Match : adh_short (HMM E-Value=8.9e-08)
Length = 272
Score = 50.8 bits (116), Expect = 7e-07
Identities = 25/67 (37%), Positives = 39/67 (58%)
Frame = +3
Query: 3 LTMLAIPHLIKTKGNIVNVSSVTGLRSFPNVLAYCISKSAIDQFTRCVALEVALKGVRVN 182
L+ A PHL ++ G+I+N+ + R N YC+SK+ + T+ +A + A VRVN
Sbjct: 131 LSQAAFPHLKRSHGSIINMIDIHAERPLANHSVYCVSKAGLHMCTQALAKDFA-PDVRVN 189
Query: 183 AVNPGVI 203
V+PG I
Sbjct: 190 GVSPGFI 196
>SB_8926| Best HMM Match : adh_short (HMM E-Value=1.5e-15)
Length = 537
Score = 50.0 bits (114), Expect = 1e-06
Identities = 25/70 (35%), Positives = 39/70 (55%)
Frame = +3
Query: 39 KGNIVNVSSVTGLRSFPNVLAYCISKSAIDQFTRCVALEVALKGVRVNAVNPGVIATGLH 218
+G IVNVSS+ G +AY +K AI+ T +A ++A G+RVN ++PG+ T +
Sbjct: 424 RGVIVNVSSIHGTEGQSGKVAYAATKGAINAMTLPMARDLAKLGIRVNTISPGIFNTPMF 483
Query: 219 KKGEGSMNEE 248
G + E
Sbjct: 484 MAGRTKESRE 493
>SB_27289| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 605
Score = 48.8 bits (111), Expect = 3e-06
Identities = 24/71 (33%), Positives = 41/71 (57%)
Frame = +3
Query: 3 LTMLAIPHLIKTKGNIVNVSSVTGLRSFPNVLAYCISKSAIDQFTRCVALEVALKGVRVN 182
+T +P + +G +VNVSS+ G+ P++ AY I+K ++ F+ + E++ GVRV
Sbjct: 58 VTKTFLPLVKMARGRVVNVSSIAGIVVVPSMAAYSITKYGVEAFSDALRREMSPWGVRVI 117
Query: 183 AVNPGVIATGL 215
+ PG T L
Sbjct: 118 IIEPGGFKTPL 128
>SB_9273| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 240
Score = 48.0 bits (109), Expect = 5e-06
Identities = 25/90 (27%), Positives = 47/90 (52%)
Frame = +3
Query: 3 LTMLAIPHLIKTKGNIVNVSSVTGLRSFPNVLAYCISKSAIDQFTRCVALEVALKGVRVN 182
+T +P + + +G IVNV+S+ G + P Y +SK + F+ + E+A G+ V+
Sbjct: 54 VTKTFLPLVKRARGRIVNVTSIAGRFTLPFASPYSVSKYGAEAFSDAIRRELAPFGISVS 113
Query: 183 AVNPGVIATGLHKKGEGSMNEEQYKLFWQN 272
V PG T + + + +Q++ W+N
Sbjct: 114 IVEPGFFRTKMPTRENLT---QQWETLWEN 140
>SB_58732| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 47.6 bits (108), Expect = 6e-06
Identities = 22/39 (56%), Positives = 27/39 (69%)
Frame = +2
Query: 284 HALGRPGDAKEVSSVIVFLASDAASNITGATLPVDGGRH 400
H L R G+ E+++ I FL S+ AS IT A LPVDGGRH
Sbjct: 272 HMLNRLGEPAEIAAAISFLCSEDASFITAADLPVDGGRH 310
Score = 46.4 bits (105), Expect = 1e-05
Identities = 21/52 (40%), Positives = 35/52 (67%)
Frame = +3
Query: 42 GNIVNVSSVTGLRSFPNVLAYCISKSAIDQFTRCVALEVALKGVRVNAVNPG 197
G +VN++S++ R+ P Y SK AI T+C+AL++A +RVN+++PG
Sbjct: 181 GAVVNLASISAHRAQPVHWTYSSSKGAIISMTKCMALDLAKDHIRVNSLSPG 232
>SB_9401| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 321
Score = 47.6 bits (108), Expect = 6e-06
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +3
Query: 3 LTMLAIPHLIKTK-GNIVNVSSVTGLRSFPNVLAYCISKSAIDQFTRCVALEVALKGVRV 179
+T IPH+ K + G++VN+ SV G+ P YC SK A++ + +A + ++
Sbjct: 153 MTNAVIPHMKKQRAGHVVNIGSVLGIVGTPFSEIYCASKFAVEGYAEAMAPVLGKFNIKT 212
Query: 180 NAVNPGVIATGLHKKGEGSMNE 245
+ PG +AT + +E
Sbjct: 213 TIIEPGPVATNFASNAKAIRDE 234
>SB_26576| Best HMM Match : LMWPc (HMM E-Value=5.60519e-45)
Length = 620
Score = 46.8 bits (106), Expect = 1e-05
Identities = 22/69 (31%), Positives = 38/69 (55%)
Frame = +3
Query: 42 GNIVNVSSVTGLRSFPNVLAYCISKSAIDQFTRCVALEVALKGVRVNAVNPGVIATGLHK 221
G+I+N+SS+ Y SK+ ++ T+ A+E+A G+R NA+ PG I T + +
Sbjct: 401 GSIINISSIVAKSGNMGQANYAASKAGVEGLTKVCAIELARFGIRCNAILPGFIDTPMTR 460
Query: 222 KGEGSMNEE 248
K + E+
Sbjct: 461 KVPAHITEQ 469
Score = 34.7 bits (76), Expect = 0.047
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +2
Query: 290 LGRPGDAKEVSSVIVFLASDAASNITGATLPVDG 391
LGR G ++ V+ FLA D +S ITGA++ V G
Sbjct: 476 LGRFGQPSNIADVVSFLACDESSYITGASIDVTG 509
>SB_3252| Best HMM Match : adh_short (HMM E-Value=4.8e-10)
Length = 289
Score = 46.8 bits (106), Expect = 1e-05
Identities = 23/59 (38%), Positives = 35/59 (59%)
Frame = +3
Query: 42 GNIVNVSSVTGLRSFPNVLAYCISKSAIDQFTRCVALEVALKGVRVNAVNPGVIATGLH 218
G I+N++SV P+ AY +K A+ T+ +ALE+ + VNAV PG IAT ++
Sbjct: 169 GRIINITSVHEHTPLPDASAYTAAKHALGGLTKAMALELVRHKILVNAVAPGAIATPMN 227
>SB_6559| Best HMM Match : adh_short (HMM E-Value=4.3)
Length = 253
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/44 (47%), Positives = 27/44 (61%)
Frame = +2
Query: 269 KCAETHALGRPGDAKEVSSVIVFLASDAASNITGATLPVDGGRH 400
K ++ + R G+ +E S V+ FL S AS ITG LPVDGG H
Sbjct: 208 KRIQSTPMRRFGEGREFSQVVSFLCSPRASFITGVALPVDGGLH 251
>SB_27292| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 739
Score = 41.5 bits (93), Expect = 4e-04
Identities = 27/101 (26%), Positives = 48/101 (47%)
Frame = +3
Query: 3 LTMLAIPHLIKTKGNIVNVSSVTGLRSFPNVLAYCISKSAIDQFTRCVALEVALKGVRVN 182
+T +P + +G +VNVSS+ GL + Y I+K ++ F+ + E+ GVRV+
Sbjct: 28 VTKTFLPLVKMARGRVVNVSSIVGLIANELTAPYSITKYGVEAFSDVLRREMLPWGVRVS 87
Query: 183 AVNPGVIATGLHKKGEGSMNEEQYKLFWQNAQRPTLSADLG 305
+ P T L ++ ++Y W N P + + G
Sbjct: 88 IIEPQAFKTPLW----DNIATKKYMSLW-NGLDPEMKKEYG 123
>SB_39007| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 115
Score = 40.7 bits (91), Expect = 7e-04
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = +3
Query: 69 TGLRSFPNVLAYCISKSAIDQFTRCVALEVALKGVRVNAVNPGVIATGL-HKKGEGSMNE 245
+G S P++ YCISK A++ F+ + LE+ GV+V V PG T + HK E
Sbjct: 34 SGYISVPSIGVYCISKFAVEAFSSALRLELEPWGVKVIVVEPGGYRTEMTHKHNLIQALE 93
Query: 246 EQYK 257
+ +K
Sbjct: 94 QNWK 97
>SB_32367| Best HMM Match : adh_short (HMM E-Value=1.7e-07)
Length = 384
Score = 39.9 bits (89), Expect = 0.001
Identities = 20/41 (48%), Positives = 26/41 (63%)
Frame = +2
Query: 269 KCAETHALGRPGDAKEVSSVIVFLASDAASNITGATLPVDG 391
K +T R G+ +EVS + FL S AAS ITG+T+ VDG
Sbjct: 236 KIRQTLPAKRCGETEEVSGAVCFLLSPAASYITGSTIKVDG 276
Score = 35.9 bits (79), Expect = 0.020
Identities = 18/54 (33%), Positives = 31/54 (57%)
Frame = +3
Query: 42 GNIVNVSSVTGLRSFPNVLAYCISKSAIDQFTRCVALEVALKGVRVNAVNPGVI 203
G+IVN+ V + +PN+ +++ + T +A+E G+R+N V PGVI
Sbjct: 167 GSIVNII-VDFFKGYPNMAHTGAARAGVHNLTMSLAVEWISNGIRINNVAPGVI 219
>SB_38785| Best HMM Match : adh_short (HMM E-Value=2.4e-06)
Length = 267
Score = 38.7 bits (86), Expect = 0.003
Identities = 21/59 (35%), Positives = 29/59 (49%)
Frame = +3
Query: 39 KGNIVNVSSVTGLRSFPNVLAYCISKSAIDQFTRCVALEVALKGVRVNAVNPGVIATGL 215
+G I N +SV AY SK I T +A ++A G+RVN + PG+ T L
Sbjct: 153 RGVITNTASVAAFDGQMGQAAYSASKGGIVGMTLPIARDLARNGIRVNTIAPGLFLTPL 211
>SB_44869| Best HMM Match : adh_short (HMM E-Value=5.4e-23)
Length = 228
Score = 37.9 bits (84), Expect = 0.005
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Frame = +3
Query: 18 IPHLIKT-KGNIVNVSSVTGLRSFPNVLAYCISKSAIDQFTRCVALEVALKGVRVNAVNP 194
+P +IK KG IVN SS G + YC +K I+ TR +A+E+ + A++P
Sbjct: 123 LPKMIKAGKGVIVNFSSGYGKAGKAKMAPYCATKWGIEGLTRALAMELP-PSMACIALDP 181
Query: 195 GVIAT 209
G++ T
Sbjct: 182 GMVNT 186
>SB_34916| Best HMM Match : adh_short (HMM E-Value=4.8e-06)
Length = 251
Score = 37.9 bits (84), Expect = 0.005
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Frame = +3
Query: 15 AIPHLIKTKGNIVNVSSVTGLRSFPN---VLAYCISKSAIDQFTRCVALEVALKGVRVNA 185
++P L K IVN+SS T L S + + A SK A++ T+ +++++ G+ A
Sbjct: 140 SVPDLKTGKALIVNISSKTSLISDNHSGGMYASRASKCALNMVTKSLSVDLKKDGILAVA 199
Query: 186 VNPGVIATGLHKKGEGSMNEEQ 251
VNPG + T K + E+
Sbjct: 200 VNPGFVKTRKEFKDAAPLTPEE 221
>SB_43004| Best HMM Match : FAD_binding_4 (HMM E-Value=1.4e-18)
Length = 1067
Score = 37.1 bits (82), Expect = 0.009
Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 1/93 (1%)
Frame = +3
Query: 36 TKGNIVNVSSVTGLRSFPNVLAYCISKSAIDQFTRCVALEVALKGVRVNAVNPGVIATGL 215
TK I N+SS+ ++++ YC+ K++ D +A E VR+ PG + T +
Sbjct: 927 TKRYIANISSLMAIQAWKGFSLYCVGKASRDMAHSVLATEE--DDVRILNYAPGPLDTDM 984
Query: 216 HK-KGEGSMNEEQYKLFWQNAQRPTLSADLGMP 311
+ E S N+E +L + P+L ++ +P
Sbjct: 985 NNIIQEWSYNQEGKELLLTTPKVPSLRVEIILP 1017
>SB_44870| Best HMM Match : adh_short (HMM E-Value=5.4e-11)
Length = 236
Score = 37.1 bits (82), Expect = 0.009
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Frame = +3
Query: 18 IPHLI--KTKGNIVNVSSVTGLRSFPNVLAYCISKSAIDQFTRCVALEVALKGVRVNAVN 191
+P +I K KG IVN +S G P V YC +K A++ ++ +A E+ + + VN
Sbjct: 128 LPSMIEAKRKGVIVNFTSGWGRCVAPEVAPYCTTKWALEGLSKALAEELP-EYLTCVPVN 186
Query: 192 PGVIATGLHKKGEGSMNEEQY 254
PG+I T + + G +
Sbjct: 187 PGIINTPMLQTNFGRQGASMF 207
>SB_39237| Best HMM Match : adh_short (HMM E-Value=1.6e-11)
Length = 305
Score = 36.7 bits (81), Expect = 0.012
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Frame = +3
Query: 27 LIKTKGNIVNVSSVTGLRSFPNVLAYCISKSAIDQFTRCVALEVA---LKGVRVNAVNPG 197
L K G++VN++S G P + YC SK F + +E++ GV+ V P
Sbjct: 191 LAKNHGHVVNIASSAGFFGVPGMCDYCSSKFGAVGFDESLRMELSSLGKTGVKTTVVCPY 250
Query: 198 VIATGL 215
I TG+
Sbjct: 251 YINTGM 256
>SB_58583| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 135
Score = 36.3 bits (80), Expect = 0.015
Identities = 19/37 (51%), Positives = 24/37 (64%)
Frame = +3
Query: 99 AYCISKSAIDQFTRCVALEVALKGVRVNAVNPGVIAT 209
AY ISK+ + T+ +A E A G+RVN V PGVI T
Sbjct: 38 AYSISKTTLLGLTKALADECADIGIRVNCVAPGVIKT 74
>SB_26063| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 426
Score = 35.5 bits (78), Expect = 0.027
Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 4/102 (3%)
Frame = +3
Query: 3 LTMLAIPHLI-KTKGNIVNVSSVTGLRSFPNVLAYCISKSAIDQFTRCVA-LEVALKGVR 176
LT IP + G+I+N+ S+ G+R P YC SK A++ +A L + V
Sbjct: 315 LTKAVIPKMKGNPSGHIINIPSIGGIRGVPFNAIYCSSKFAVEGMAESLAPLLRKITNVE 374
Query: 177 VNAVNPGVIA--TGLHKKGEGSMNEEQYKLFWQNAQRPTLSA 296
V +A T + + +E+ K +NA+ +SA
Sbjct: 375 PGPVKTAFVANSTEMAPVYDDEGVDEETKQLLENAKTKMMSA 416
>SB_39030| Best HMM Match : adh_short (HMM E-Value=5.5e-34)
Length = 527
Score = 31.5 bits (68), Expect = 0.44
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = +3
Query: 42 GNIVNVSSVTGLRSFPNVLAYCISKSAIDQFTRCVALEVALKGVRVNAVNPGVIAT 209
G+I+N+SS G P YC SK A++ + +A + GV+ A++ G + +
Sbjct: 136 GHIINISSTAGHTGMPFTGLYCASKFAVEGLSESLAPLLRKFGVKF-ALSTGYLVS 190
>SB_28773| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 80
Score = 31.5 bits (68), Expect = 0.44
Identities = 21/69 (30%), Positives = 30/69 (43%)
Frame = +3
Query: 99 AYCISKSAIDQFTRCVALEVALKGVRVNAVNPGVIATGLHKKGEGSMNEEQYKLFWQNAQ 278
AYCISK + F+ + E++ GV V V PG T + + +E K W
Sbjct: 9 AYCISKFGVSVFSDALRREMSPWGVGVVLVEPGAFKT---QATDPKATKENIKGLWDRLD 65
Query: 279 RPTLSADLG 305
PT + G
Sbjct: 66 -PTTREEYG 73
>SB_28889| Best HMM Match : ANF_receptor (HMM E-Value=1.1e-34)
Length = 933
Score = 30.7 bits (66), Expect = 0.77
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = -2
Query: 316 FFGIPRSAESVGLCAFCQKSLYCSSFILPSPFLCKPVAITPGLTAFTRTPFN 161
++G+P + S + LY S+F+ PF A TPGL F FN
Sbjct: 42 YWGVPMISYSCSSSDLTNRKLY-STFVRTQPFSRSYEASTPGLLRFLMNSFN 92
>SB_28642| Best HMM Match : RVT_1 (HMM E-Value=8.4e-39)
Length = 1750
Score = 30.3 bits (65), Expect = 1.0
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Frame = +3
Query: 27 LIKTKGNIVNVSSVTGLRSFPNV--LAYCISKSAIDQFTRCVALE---VALKGVRVNAVN 191
L + +G+IV +SSV+G SFP + YC SK F ++ E + GV+ V
Sbjct: 1346 LEQNQGHIVTISSVSG--SFPTAFQVEYCASKYGAVGFHDALSHELYTLGKDGVKTTLVQ 1403
Query: 192 PGVIATGL 215
P TG+
Sbjct: 1404 PFFFDTGI 1411
>SB_28495| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6753
Score = 29.5 bits (63), Expect = 1.8
Identities = 19/54 (35%), Positives = 26/54 (48%)
Frame = +3
Query: 27 LIKTKGNIVNVSSVTGLRSFPNVLAYCISKSAIDQFTRCVALEVALKGVRVNAV 188
L K + +V G SFP +L +S A+D F VA ++ GV V AV
Sbjct: 2208 LQKGLSEVKSVFQTYGRTSFPRILFTMLSSHALDDFA-TVAADLRKSGVMVYAV 2260
>SB_8042| Best HMM Match : DUF803 (HMM E-Value=0)
Length = 603
Score = 29.5 bits (63), Expect = 1.8
Identities = 11/41 (26%), Positives = 24/41 (58%)
Frame = +3
Query: 78 RSFPNVLAYCISKSAIDQFTRCVALEVALKGVRVNAVNPGV 200
++FP + Y +K ++ ++ + E+A GV+V + PG+
Sbjct: 214 KAFPGLAIYSGTKFFVEALSQGLRQEIAGSGVKVTTIQPGI 254
>SB_43204| Best HMM Match : DnaB (HMM E-Value=2.8)
Length = 268
Score = 29.1 bits (62), Expect = 2.3
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Frame = +3
Query: 105 CISKSAIDQFTRCVALEVALKGVRVNAVNPGVI---ATG-LHKKGEGSMNE 245
C+SKSA+ + R +L A K VN GV+ ATG L+ G+GS E
Sbjct: 141 CLSKSAVARAKRRQSLYAASKSPAVNDNRNGVLFQNATGNLNCSGDGSTEE 191
>SB_33399| Best HMM Match : Ank (HMM E-Value=0)
Length = 1416
Score = 28.7 bits (61), Expect = 3.1
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = -2
Query: 169 PFNATSKATHLVN*SIADLEMQYARTLGKDLKPVTLETLTMFPL 38
P +AT +A HL++ I D E L + P++ TL+ FP+
Sbjct: 963 PADATRQAHHLISALIKDPECDINDVLPRRKTPLSPRTLSSFPI 1006
>SB_47084| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 355
Score = 28.3 bits (60), Expect = 4.1
Identities = 20/57 (35%), Positives = 32/57 (56%)
Frame = +3
Query: 96 LAYCISKSAIDQFTRCVALEVALKGVRVNAVNPGVIATGLHKKGEGSMNEEQYKLFW 266
+ Y SK A FT ++ + +GV VNA+ PG++ TGL + + M+ + LFW
Sbjct: 235 VGYGRSKLANFLFTHELSKRLP-QGVTVNALCPGMVWTGLGRTSK--MSWKMKLLFW 288
>SB_26483| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1702
Score = 28.3 bits (60), Expect = 4.1
Identities = 22/67 (32%), Positives = 32/67 (47%)
Frame = -2
Query: 517 FFFYALRVYSPLHLDIIKECLHSFKVYFHCISFLSRTHGMTTSIYRQSGTSNVACSITS* 338
+F+ + RV + L SF+V + I+F SRT T Y Q G + S+T+
Sbjct: 1155 YFWGSFRVLGSFRVLGSFRVLGSFRVLYRPIAFASRTLTATERNYSQFGKEGL--SLTT- 1211
Query: 337 ENDD*RY 317
E DD Y
Sbjct: 1212 ERDDNEY 1218
>SB_4593| Best HMM Match : Ion_trans (HMM E-Value=2.9e-40)
Length = 1120
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/47 (29%), Positives = 19/47 (40%)
Frame = -3
Query: 393 PPSTGKVAPVMLLAASLAKKTMTEDTSLASPGLPRAWVSAHFAKKAY 253
PP T K P+ + A S K + L P A + HF +Y
Sbjct: 614 PPGTAKPQPLFIRAVSKKKHETCKQPFLVRPNPSYACATCHFEDPSY 660
>SB_20643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 162
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +3
Query: 102 YCISKSAIDQFTRCVALEVALKGVRVNAVNPGVIATGLHKKGEG 233
Y SK AI FTR +A + GV +++PG+I T ++ G
Sbjct: 45 YGNSKLAIILFTRELAKRLKDTGVTTYSLHPGIIMTDFAREISG 88
>SB_14553| Best HMM Match : adh_short (HMM E-Value=4.2e-08)
Length = 319
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +3
Query: 102 YCISKSAIDQFTRCVALEVALKGVRVNAVNPGVIATGLHKKGEG 233
Y SK AI FTR +A + GV +++PG+I T ++ G
Sbjct: 202 YGNSKLAIILFTRELAKRLKDTGVTTYSLHPGIIMTDFAREISG 245
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,304,192
Number of Sequences: 59808
Number of extensions: 308771
Number of successful extensions: 819
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 757
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 819
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1184975377
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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