Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30851
(777 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5UAT5 Cluster: 60S ribosomal protein L6; n=15; Bilater... 183 5e-45
UniRef50_Q9V9W3 Cluster: 60S ribosomal protein L6; n=6; Metazoa|... 107 4e-22
UniRef50_Q02878 Cluster: 60S ribosomal protein L6; n=71; Euteleo... 91 4e-17
UniRef50_Q5DE99 Cluster: 60S ribosomal protein L6; n=1; Schistos... 84 4e-15
UniRef50_A7S4S4 Cluster: Predicted protein; n=5; Eukaryota|Rep: ... 84 4e-15
UniRef50_A3F4R4 Cluster: 60S ribosomal protein L6; n=1; Taenia a... 81 4e-14
UniRef50_Q6B8B0 Cluster: 60S ribosomal protein L6; n=1; Ixodes p... 80 5e-14
UniRef50_Q4N3I8 Cluster: 60S ribosomal protein L6e, putative; n=... 79 1e-13
UniRef50_A7L698 Cluster: 60S ribosomal protein L6; n=1; Artemia ... 79 2e-13
UniRef50_Q1DRV0 Cluster: 60S ribosomal protein L6; n=15; Pezizom... 78 3e-13
UniRef50_Q9C9C6 Cluster: 60S ribosomal protein L6-2; n=11; Eukar... 74 3e-12
UniRef50_Q7XY83 Cluster: 60S ribosomal protein L6; n=1; Griffith... 72 1e-11
UniRef50_Q5CM54 Cluster: 60S ribosomal protein L6; n=2; Cryptosp... 72 2e-11
UniRef50_Q01IK4 Cluster: 60S ribosomal protein L6; n=17; Eukaryo... 71 2e-11
UniRef50_Q54D63 Cluster: 60S ribosomal protein L6; n=2; Eukaryot... 71 3e-11
UniRef50_Q7SH22 Cluster: 60S ribosomal protein L6; n=2; Sordaria... 69 1e-10
UniRef50_P47991 Cluster: 60S ribosomal protein L6; n=2; Caenorha... 66 7e-10
UniRef50_Q4X638 Cluster: 60S ribosomal subunit protein L6e, puta... 64 4e-09
UniRef50_Q02326 Cluster: 60S ribosomal protein L6-A; n=16; Dikar... 62 2e-08
UniRef50_A0N0S1 Cluster: 60S ribosomal protein L6; n=1; Strongyl... 62 2e-08
UniRef50_A0CYT3 Cluster: 60S ribosomal protein L6; n=5; Oligohym... 60 8e-08
UniRef50_UPI0000DA1E66 Cluster: PREDICTED: similar to ribosomal ... 58 3e-07
UniRef50_Q4Q4D3 Cluster: 60S ribosomal protein L6, putative; n=1... 54 5e-06
UniRef50_A2EBD1 Cluster: 60S ribosomal protein L6, putative; n=7... 47 6e-04
UniRef50_A5C5P0 Cluster: 60S ribosomal protein L6; n=1; Vitis vi... 45 0.002
UniRef50_Q8U2L5 Cluster: 50S ribosomal protein L14e; n=5; Archae... 42 0.017
UniRef50_Q8SR91 Cluster: 60S RIBOSOMAL PROTEIN L6; n=1; Encephal... 42 0.023
UniRef50_A7QIH5 Cluster: Chromosome chr12 scaffold_103, whole ge... 40 0.069
UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia... 40 0.069
UniRef50_P54054 Cluster: 50S ribosomal protein L14e; n=8; Euryar... 40 0.092
UniRef50_UPI0000DC20AA Cluster: UPI0000DC20AA related cluster; n... 38 0.21
UniRef50_A0EZZ8 Cluster: 60S ribosomal protein L6; n=5; Euteleos... 37 0.65
UniRef50_A7E738 Cluster: Predicted protein; n=1; Sclerotinia scl... 36 1.5
UniRef50_Q8ZYB4 Cluster: 50S ribosomal protein L14e; n=14; Archa... 36 1.5
UniRef50_A7ET80 Cluster: Putative uncharacterized protein; n=1; ... 35 2.0
UniRef50_Q7UL14 Cluster: Putative uncharacterized protein; n=2; ... 34 3.4
UniRef50_Q9VHM8 Cluster: CG8136-PB, isoform B; n=3; Drosophila m... 34 3.4
UniRef50_A6QSD0 Cluster: Predicted protein; n=1; Ajellomyces cap... 34 3.4
UniRef50_Q4ZTN3 Cluster: Sensor protein; n=5; Pseudomonas|Rep: S... 34 4.6
UniRef50_Q5KML3 Cluster: VpsB, putative; n=2; Basidiomycota|Rep:... 33 6.0
UniRef50_A6SQ32 Cluster: Putative uncharacterized protein; n=1; ... 33 8.0
>UniRef50_Q5UAT5 Cluster: 60S ribosomal protein L6; n=15;
Bilateria|Rep: 60S ribosomal protein L6 - Bombyx mori
(Silk moth)
Length = 273
Score = 183 bits (445), Expect = 5e-45
Identities = 86/90 (95%), Positives = 87/90 (96%)
Frame = +3
Query: 240 GNQNSPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVL 419
G + PLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVL
Sbjct: 83 GTRTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVL 142
Query: 420 VGILPSGLLLVTGPFAFNSCPLRRIPQRYV 509
VGILPSGLLLVTGPFAFNSCPLRRIPQRYV
Sbjct: 143 VGILPSGLLLVTGPFAFNSCPLRRIPQRYV 172
Score = 149 bits (361), Expect = 8e-35
Identities = 74/101 (73%), Positives = 74/101 (73%)
Frame = +2
Query: 461 FCFQFVPATPYSSALCIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXXEGDDIFA 640
F F P IGTSTRISLGNFKLPKHFNDDYF EGDDIFA
Sbjct: 157 FAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFKKNKKCVKRTVKRKEGDDIFA 216
Query: 641 TKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLK 763
TKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLK
Sbjct: 217 TKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLK 257
Score = 111 bits (266), Expect = 2e-23
Identities = 53/64 (82%), Positives = 53/64 (82%)
Frame = +1
Query: 67 STKKPRNYDLGNGVMRFSKSKMFHKKAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGT 246
STKKPRNYDLGNGVMRFSKSKMFHKKAKYKFIG LTVVVKQIGGEKNGGT
Sbjct: 25 STKKPRNYDLGNGVMRFSKSKMFHKKAKYKFIGKKNPKPEKPKKLTVVVKQIGGEKNGGT 84
Query: 247 RTVP 258
RTVP
Sbjct: 85 RTVP 88
>UniRef50_Q9V9W3 Cluster: 60S ribosomal protein L6; n=6;
Metazoa|Rep: 60S ribosomal protein L6 - Drosophila
melanogaster (Fruit fly)
Length = 262
Score = 107 bits (256), Expect = 4e-22
Identities = 53/90 (58%), Positives = 63/90 (70%)
Frame = +3
Query: 240 GNQNSPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVL 419
G + LK+ K+ YPT+ ++ FS+H R R NL GTV ILLAGRH GKRVVL
Sbjct: 75 GERTVFLKKSKASYPTKTFVKKRPSKANFSEHKRNTRRNLTPGTVLILLAGRHQGKRVVL 134
Query: 420 VGILPSGLLLVTGPFAFNSCPLRRIPQRYV 509
+ +L SGLLLVTGPFA NSCPLRR+ QRYV
Sbjct: 135 LKVLASGLLLVTGPFALNSCPLRRVSQRYV 164
Score = 82.2 bits (194), Expect = 1e-14
Identities = 43/101 (42%), Positives = 55/101 (54%)
Frame = +2
Query: 461 FCFQFVPATPYSSALCIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXXEGDDIFA 640
F P S IGTS+++ LG FK+P+H ND YF DIFA
Sbjct: 149 FALNSCPLRRVSQRYVIGTSSKVDLGAFKVPEHLNDAYFRRLKAKKDKKTGEA---DIFA 205
Query: 641 TKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLK 763
KKE++VP+EQRK DQK VD A++K I A P+ K YL+
Sbjct: 206 AKKERFVPNEQRKKDQKEVDAALLKVIKAHPEGKFFAKYLQ 246
Score = 45.2 bits (102), Expect = 0.002
Identities = 25/73 (34%), Positives = 36/73 (49%)
Frame = +1
Query: 73 KKPRNYDLGNGVMRFSKSKMFHKKAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTRT 252
K P N L G++R+SK++M+ ++A Y+ VK+IGG KNGG RT
Sbjct: 19 KHPVNSYLKGGILRYSKAQMYKRRALYRLKDKKSPVVEKAKVPIKKVKKIGGPKNGGERT 78
Query: 253 VPSNVGSPSTPLR 291
V S P +
Sbjct: 79 VFLKKSKASYPTK 91
>UniRef50_Q02878 Cluster: 60S ribosomal protein L6; n=71;
Euteleostomi|Rep: 60S ribosomal protein L6 - Homo
sapiens (Human)
Length = 288
Score = 90.6 bits (215), Expect = 4e-17
Identities = 45/94 (47%), Positives = 62/94 (65%), Gaps = 2/94 (2%)
Frame = +3
Query: 240 GNQNSPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRV 413
G + L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L GRH GKRV
Sbjct: 103 GTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRV 162
Query: 414 VLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVSA 515
V + L SGLLLVTGP N PLRR Q++V A
Sbjct: 163 VFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIA 196
Score = 64.9 bits (151), Expect = 2e-09
Identities = 40/96 (41%), Positives = 50/96 (52%)
Frame = +2
Query: 476 VPATPYSSALCIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXXEGDDIFATKKEK 655
VP I TST+I + N K+PKH D YF EG+ IF T+KEK
Sbjct: 184 VPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYFKKKKLRKPRHQ---EGE-IFDTEKEK 239
Query: 656 YVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLK 763
Y +EQRK DQK VD ++ I A P L+GYL+
Sbjct: 240 YEITEQRKIDQKAVDSQILPKIKAIPQ---LQGYLR 272
Score = 41.1 bits (92), Expect = 0.030
Identities = 24/62 (38%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Frame = +1
Query: 82 RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTR 249
RN L G+ R+S+S M+ +KA KY L V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 250 TV 255
V
Sbjct: 106 VV 107
>UniRef50_Q5DE99 Cluster: 60S ribosomal protein L6; n=1; Schistosoma
japonicum|Rep: 60S ribosomal protein L6 - Schistosoma
japonicum (Blood fluke)
Length = 238
Score = 83.8 bits (198), Expect = 4e-15
Identities = 47/90 (52%), Positives = 58/90 (64%), Gaps = 3/90 (3%)
Frame = +3
Query: 255 PLKRRKSFYPTQE---KIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVG 425
P R Y TQ+ K+R + FS HVR+IR +++ GTV ILLAG H GKRV+ +
Sbjct: 55 PKTRFPRSYVTQQGKRKLRLRRA-KCFSNHVRKIRSSIQPGTVLILLAGPHKGKRVIFLK 113
Query: 426 ILPSGLLLVTGPFAFNSCPLRRIPQRYVSA 515
L SGLLLVTGPF +N PLRR+ Q YV A
Sbjct: 114 ALKSGLLLVTGPFKYNGVPLRRVNQCYVIA 143
Score = 69.7 bits (163), Expect = 7e-11
Identities = 36/101 (35%), Positives = 52/101 (51%)
Frame = +2
Query: 461 FCFQFVPATPYSSALCIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXXEGDDIFA 640
F + VP + I TSTRI + F +PKH +D+YF + +F+
Sbjct: 126 FKYNGVPLRRVNQCYVIATSTRIDISKFDVPKHIDDEYFRRVDLKESKT----DAGKLFS 181
Query: 641 TKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLK 763
T+ +KY S+ RK DQK VD + AI + PD K+L YL+
Sbjct: 182 TETKKYTVSDIRKEDQKLVDNQIRAAIKSHPDSKILHAYLR 222
>UniRef50_A7S4S4 Cluster: Predicted protein; n=5; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 244
Score = 83.8 bits (198), Expect = 4e-15
Identities = 45/92 (48%), Positives = 58/92 (63%)
Frame = +3
Query: 240 GNQNSPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVL 419
G + P++R +YPT++ +R R + ++R ++ GTV ILLAG H GKRVV
Sbjct: 63 GKRVVPVQRESRYYPTED-VRRRLANRK-KPGMAKLRSSITPGTVLILLAGAHRGKRVVF 120
Query: 420 VGILPSGLLLVTGPFAFNSCPLRRIPQRYVSA 515
+ L SGLLLVTGPF N PLRRIPQ YV A
Sbjct: 121 LKQLNSGLLLVTGPFKINGVPLRRIPQSYVIA 152
Score = 48.0 bits (109), Expect = 3e-04
Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Frame = +2
Query: 476 VPATPYSSALCIGTSTRISLGNFKLPKH-FNDDYFXXXXXXXXXXXXXXEGDDIFATKKE 652
VP + I TST I + + KLP+H F D+ + +D+F E
Sbjct: 140 VPLRRIPQSYVIATSTHIDVSDVKLPEHAFADESYFKGEPKKKK-----RSEDMFEEAAE 194
Query: 653 KYVPSEQRKTDQKTVDEAVIKAIGARPDKK 742
+ PSEQR DQK VD+ ++ I A P+ K
Sbjct: 195 EKKPSEQRIADQKAVDDQILPKISAVPNMK 224
Score = 41.9 bits (94), Expect = 0.017
Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Frame = +1
Query: 82 RNYDLGNGVMRFSKSKMFHKKAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTRTVPS 261
RN +L G+ R+S+S ++ K+A YK T K IGG+KNGG R VP
Sbjct: 11 RNPELAPGISRYSRSAIYKKRALYKRKKTGVKKVVQDEPRTKT-KDIGGDKNGGKRVVPV 69
Query: 262 NVGS---PSTPLRRK 297
S P+ +RR+
Sbjct: 70 QRESRYYPTEDVRRR 84
>UniRef50_A3F4R4 Cluster: 60S ribosomal protein L6; n=1; Taenia
asiatica|Rep: 60S ribosomal protein L6 - Taenia asiatica
(Asian tapeworm)
Length = 212
Score = 80.6 bits (190), Expect = 4e-14
Identities = 40/64 (62%), Positives = 46/64 (71%)
Frame = +3
Query: 324 FSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQR 503
F+ H RRIR ++ G V ILLAGRH KRVV + L SGLLLVTGPF +N PLRR+ QR
Sbjct: 86 FADHRRRIRKSITPGKVLILLAGRHRAKRVVFLKSLASGLLLVTGPFKYNGVPLRRVNQR 145
Query: 504 YVSA 515
YV A
Sbjct: 146 YVIA 149
Score = 50.4 bits (115), Expect = 5e-05
Identities = 30/86 (34%), Positives = 41/86 (47%)
Frame = +2
Query: 461 FCFQFVPATPYSSALCIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXXEGDDIFA 640
F + VP + I T TRI + N K+P ND++F D IFA
Sbjct: 132 FKYNGVPLRRVNQRYVIATKTRIKIKNIKIPSQLNDEFFRRQDLKTKKSV-----DKIFA 186
Query: 641 TKKEKYVPSEQRKTDQKTVDEAVIKA 718
+++KY S+ RK QK VD A+I A
Sbjct: 187 EEEKKYTVSDDRKKLQKQVDTALIAA 212
>UniRef50_Q6B8B0 Cluster: 60S ribosomal protein L6; n=1; Ixodes
pacificus|Rep: 60S ribosomal protein L6 - Ixodes
pacificus (western blacklegged tick)
Length = 268
Score = 80.2 bits (189), Expect = 5e-14
Identities = 44/94 (46%), Positives = 59/94 (62%), Gaps = 2/94 (2%)
Frame = +3
Query: 240 GNQNSPLKRRKSFYPTQE--KIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRV 413
G + PLK+ + YPT++ + + +S +P S+ +R + GTV ILLAG H GKRV
Sbjct: 79 GKRVLPLKKERRSYPTEDSPQHKRTSHMKPSSRTRVALRKRITPGTVLILLAGPHRGKRV 138
Query: 414 VLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVSA 515
V + L +GLL VTGP+ N CPLRRI Q YV A
Sbjct: 139 VFLKQLKTGLLPVTGPYGVNGCPLRRINQIYVIA 172
Score = 56.0 bits (129), Expect = 1e-06
Identities = 32/84 (38%), Positives = 47/84 (55%)
Frame = +2
Query: 509 IGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXXEGDDIFATKKEKYVPSEQRKTDQ 688
I TST++ L KLP+ +D YF EG+ IF K +++V SE+ K Q
Sbjct: 171 IATSTKLDLSKVKLPEGLDDRYFKRNKGPKRGRKD--EGE-IFEAKPQEHVVSEEHKKTQ 227
Query: 689 KTVDEAVIKAIGARPDKKVLRGYL 760
VD+ V++A+ A P+KK+L YL
Sbjct: 228 AEVDKQVLEAVKAHPEKKMLLHYL 251
Score = 52.0 bits (119), Expect = 2e-05
Identities = 25/60 (41%), Positives = 33/60 (55%)
Frame = +1
Query: 79 PRNYDLGNGVMRFSKSKMFHKKAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTRTVP 258
P+N+ L GV FS+SKMFHK+ +K V VK++ GEKNGG R +P
Sbjct: 25 PKNHKLPGGVWLFSRSKMFHKRGLFKVKHAAPTKEKRKRKKRVTVKRVKGEKNGGKRVLP 84
>UniRef50_Q4N3I8 Cluster: 60S ribosomal protein L6e, putative; n=3;
Piroplasmida|Rep: 60S ribosomal protein L6e, putative -
Theileria parva
Length = 212
Score = 79.0 bits (186), Expect = 1e-13
Identities = 44/86 (51%), Positives = 56/86 (65%)
Frame = +3
Query: 258 LKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPS 437
L RRK+ K + GR ++ V ++R +LK G V ILL G + GKRVVL+ +L S
Sbjct: 14 LNRRKTVVTRLGKTKVV--GRKYAS-VPKVRESLKPGAVLILLTGSYKGKRVVLLKVLKS 70
Query: 438 GLLLVTGPFAFNSCPLRRIPQRYVSA 515
GLLLVTGPF+FN PLRR+ RYV A
Sbjct: 71 GLLLVTGPFSFNGVPLRRVNSRYVIA 96
>UniRef50_A7L698 Cluster: 60S ribosomal protein L6; n=1; Artemia
franciscana|Rep: 60S ribosomal protein L6 - Artemia
sanfranciscana (Brine shrimp) (Artemia franciscana)
Length = 241
Score = 78.6 bits (185), Expect = 2e-13
Identities = 44/96 (45%), Positives = 55/96 (57%)
Frame = +2
Query: 476 VPATPYSSALCIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXXEGDDIFATKKEK 655
VP L I TSTRI + N K+P+H ND YF EGD IFA+K E+
Sbjct: 135 VPLRRVHQKLVIATSTRIDISNVKVPEHINDTYFRRHKVKKEAK----EGD-IFASKPER 189
Query: 656 YVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLK 763
Y P+EQRK DQ VD ++KAI A+PD +L YL+
Sbjct: 190 YTPTEQRKKDQAEVDVQLLKAIKAQPDAAMLVKYLR 225
Score = 68.1 bits (159), Expect = 2e-10
Identities = 37/85 (43%), Positives = 52/85 (61%)
Frame = +3
Query: 261 KRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSG 440
++ FYP + + +K+ +IR +L+ GT+ ILLAG + GKRVVL+ L SG
Sbjct: 63 RKPPQFYPINSRQKRFHRRLVNNKNPPKIRKSLQPGTILILLAGVNRGKRVVLLKALKSG 122
Query: 441 LLLVTGPFAFNSCPLRRIPQRYVSA 515
LLLV+GP N PLRR+ Q+ V A
Sbjct: 123 LLLVSGPLKVNRVPLRRVHQKLVIA 147
>UniRef50_Q1DRV0 Cluster: 60S ribosomal protein L6; n=15;
Pezizomycotina|Rep: 60S ribosomal protein L6 -
Coccidioides immitis
Length = 206
Score = 77.8 bits (183), Expect = 3e-13
Identities = 38/87 (43%), Positives = 56/87 (64%)
Frame = +3
Query: 255 PLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILP 434
P ++ + +YP ++ + + + H ++RP+L+ GT+ ILLAGR GKRV+L+ L
Sbjct: 26 PSQKAQKWYPADDEPQPKKARK--TAHPTKLRPSLQPGTILILLAGRFRGKRVILLKHLG 83
Query: 435 SGLLLVTGPFAFNSCPLRRIPQRYVSA 515
G+LLVTGPF N PLRR+ RYV A
Sbjct: 84 QGVLLVTGPFKLNGVPLRRVNARYVIA 110
>UniRef50_Q9C9C6 Cluster: 60S ribosomal protein L6-2; n=11;
Eukaryota|Rep: 60S ribosomal protein L6-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 233
Score = 74.1 bits (174), Expect = 3e-12
Identities = 39/87 (44%), Positives = 56/87 (64%)
Frame = +3
Query: 249 NSPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGI 428
++P+++ FYP ++ ++ R +K + +R ++ GTV I+LAGR GKRVV +
Sbjct: 55 DAPVEKPPKFYPAED-VKKPLPNRRTAKPAK-LRASITPGTVLIILAGRFKGKRVVFLKQ 112
Query: 429 LPSGLLLVTGPFAFNSCPLRRIPQRYV 509
L SGLLLVTGPF N PLRR+ Q YV
Sbjct: 113 LASGLLLVTGPFKINGVPLRRVNQAYV 139
Score = 52.0 bits (119), Expect = 2e-05
Identities = 35/93 (37%), Positives = 46/93 (49%)
Frame = +2
Query: 476 VPATPYSSALCIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXXEGDDIFATKKEK 655
VP + A IGTST++ + L K F+D YF EG+ A K+EK
Sbjct: 129 VPLRRVNQAYVIGTSTKVDISGVTLDK-FDDKYFGKVAEKKKKKT---EGEFFEAEKEEK 184
Query: 656 YVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRG 754
+ +K DQK VD A+IKAI A P+ K G
Sbjct: 185 KEIPQGKKDDQKAVDAALIKAIEAVPELKTYLG 217
>UniRef50_Q7XY83 Cluster: 60S ribosomal protein L6; n=1; Griffithsia
japonica|Rep: 60S ribosomal protein L6 - Griffithsia
japonica (Red alga)
Length = 216
Score = 72.1 bits (169), Expect = 1e-11
Identities = 39/87 (44%), Positives = 52/87 (59%)
Frame = +3
Query: 255 PLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILP 434
P K+ +YP +K + K + +RP++K GT+ ILLAG G RVV++ L
Sbjct: 39 PEKKGPKWYPADDKKTPVPSRKNVHKPTK-LRPSIKSGTIVILLAGVFRGSRVVVLKQLD 97
Query: 435 SGLLLVTGPFAFNSCPLRRIPQRYVSA 515
SG LLVTGP+A N PL R+ QRYV A
Sbjct: 98 SGQLLVTGPYAVNRIPLTRVDQRYVIA 124
>UniRef50_Q5CM54 Cluster: 60S ribosomal protein L6; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L6 -
Cryptosporidium hominis
Length = 184
Score = 71.7 bits (168), Expect = 2e-11
Identities = 35/72 (48%), Positives = 48/72 (66%)
Frame = +3
Query: 300 RASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSC 479
R S R S ++R +L+ G VCILLAG + GKRVV++ LPSGL++VTGP+A N
Sbjct: 20 RKYSSRRKASVVAPKLRSSLQPGVVCILLAGPYKGKRVVMLKALPSGLVVVTGPYALNGV 79
Query: 480 PLRRIPQRYVSA 515
P+RR+ Y+ A
Sbjct: 80 PVRRVNPAYIIA 91
>UniRef50_Q01IK4 Cluster: 60S ribosomal protein L6; n=17;
Eukaryota|Rep: 60S ribosomal protein L6 - Oryza sativa
(Rice)
Length = 222
Score = 71.3 bits (167), Expect = 2e-11
Identities = 41/81 (50%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Frame = +3
Query: 276 FYPTQE-KIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLV 452
FYP + K R S +P + ++R ++ GTV ILLAGR GKRVV + L SGLLLV
Sbjct: 53 FYPADDVKPRQPSTRKP---NPTKLRSSITPGTVLILLAGRFMGKRVVFLKQLKSGLLLV 109
Query: 453 TGPFAFNSCPLRRIPQRYVSA 515
TGPF N P+RR+ Q YV A
Sbjct: 110 TGPFKINGVPIRRVNQPYVIA 130
Score = 44.8 bits (101), Expect = 0.002
Identities = 35/95 (36%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Frame = +2
Query: 476 VPATPYSSALCIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXXEGDDIFATKKE- 652
VP + I TST++ + + K F+D YF EG+ +F T+KE
Sbjct: 118 VPIRRVNQPYVIATSTKVDISGVNVEK-FDDKYFSRDKKQKAKKT---EGE-LFETEKEA 172
Query: 653 -KYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRG 754
K +P E +K DQK VD +IKAI A PD K G
Sbjct: 173 TKNLP-EFKKEDQKVVDAELIKAIEAVPDLKTYLG 206
>UniRef50_Q54D63 Cluster: 60S ribosomal protein L6; n=2;
Eukaryota|Rep: 60S ribosomal protein L6 - Dictyostelium
discoideum AX4
Length = 236
Score = 70.9 bits (166), Expect = 3e-11
Identities = 35/57 (61%), Positives = 42/57 (73%)
Frame = +3
Query: 345 IRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVSA 515
+R ++ GTV I+LAGR AGKRVV + L SGL+L+TGPF N PLRRI QRYV A
Sbjct: 87 LRKSITPGTVLIILAGRFAGKRVVALKQLDSGLILITGPFKVNGVPLRRIDQRYVIA 143
Score = 37.1 bits (82), Expect = 0.49
Identities = 28/96 (29%), Positives = 40/96 (41%)
Frame = +2
Query: 476 VPATPYSSALCIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXXEGDDIFATKKEK 655
VP I TST+I + + K+ ND YF D+ K EK
Sbjct: 131 VPLRRIDQRYVIATSTKIDVSSVKVAATINDAYFAAEKKSTTKSEGAFFSDE---KKAEK 187
Query: 656 YVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLK 763
++ R DQK+VD A++ + +K L YLK
Sbjct: 188 KKIADSRVADQKSVDSAILAVL---KKEKFLTVYLK 220
>UniRef50_Q7SH22 Cluster: 60S ribosomal protein L6; n=2;
Sordariaceae|Rep: 60S ribosomal protein L6 - Neurospora
crassa
Length = 207
Score = 69.3 bits (162), Expect = 1e-10
Identities = 38/68 (55%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
Frame = +3
Query: 318 RPFSKHVRRIRPNLKI--GTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRR 491
RP K +R P + GTV ILLAGR GKRVVL+ L G+LLVTGPF N PLRR
Sbjct: 24 RPVRKTIRPWSPRSTLVPGTVLILLAGRFRGKRVVLLKALDQGVLLVTGPFKINGVPLRR 83
Query: 492 IPQRYVSA 515
+ RYV A
Sbjct: 84 VNARYVIA 91
>UniRef50_P47991 Cluster: 60S ribosomal protein L6; n=2;
Caenorhabditis|Rep: 60S ribosomal protein L6 -
Caenorhabditis elegans
Length = 217
Score = 66.5 bits (155), Expect = 7e-10
Identities = 36/94 (38%), Positives = 49/94 (52%)
Frame = +2
Query: 479 PATPYSSALCIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXXEGDDIFATKKEKY 658
P A I TS ++++ K+P+H ND+YF G +IFA+ K +Y
Sbjct: 113 PLRRIGQAFVIATSLKVNVSGVKIPEHINDEYFKRKSTAQKT------GKNIFASGKTEY 166
Query: 659 VPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYL 760
SEQRK D KTVD ++ AI P+ K L GYL
Sbjct: 167 TVSEQRKKDIKTVDAPILAAIKKHPEHKFLFGYL 200
Score = 65.7 bits (153), Expect = 1e-09
Identities = 36/58 (62%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = +3
Query: 345 IRPNLKIGTVCILLAGRHAGKRVVLVGILP-SGLLLVTGPFAFNSCPLRRIPQRYVSA 515
+R L GTV I+LAGRH GKRVV + LP SGLLLVTGP N PLRRI Q +V A
Sbjct: 67 LRKTLTPGTVLIVLAGRHKGKRVVFLKQLPQSGLLLVTGPHKINGFPLRRIGQAFVIA 124
>UniRef50_Q4X638 Cluster: 60S ribosomal subunit protein L6e,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L6e, putative - Plasmodium chabaudi
Length = 241
Score = 64.1 bits (149), Expect = 4e-09
Identities = 25/57 (43%), Positives = 40/57 (70%)
Frame = +3
Query: 339 RRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYV 509
R++R ++++G V I+L G+H GKR ++ +L SGLL V GP+ N PL+R+ RY+
Sbjct: 68 RKMRSSIQVGKVAIILTGKHMGKRCIIAKVLKSGLLAVVGPYEVNGVPLKRVDPRYL 124
>UniRef50_Q02326 Cluster: 60S ribosomal protein L6-A; n=16;
Dikarya|Rep: 60S ribosomal protein L6-A - Saccharomyces
cerevisiae (Baker's yeast)
Length = 176
Score = 62.1 bits (144), Expect = 2e-08
Identities = 35/85 (41%), Positives = 52/85 (61%)
Frame = +3
Query: 261 KRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSG 440
++ +YP+++ + A R ++ +++R +L GTV ILLAGR GKRVV + L
Sbjct: 4 QKAPKWYPSED-VAALKKTRKAARP-QKLRASLVPGTVLILLAGRFRGKRVVYLKHLEDN 61
Query: 441 LLLVTGPFAFNSCPLRRIPQRYVSA 515
LL++GPF N PLRR+ RYV A
Sbjct: 62 TLLISGPFKVNGVPLRRVNARYVIA 86
>UniRef50_A0N0S1 Cluster: 60S ribosomal protein L6; n=1;
Strongyloides papillosus|Rep: 60S ribosomal protein L6 -
Strongyloides papillosus
Length = 127
Score = 61.7 bits (143), Expect = 2e-08
Identities = 35/101 (34%), Positives = 49/101 (48%)
Frame = +2
Query: 461 FCFQFVPATPYSSALCIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXXEGDDIFA 640
F VP + + TST+I + K+P DDYF E DIF
Sbjct: 17 FSINGVPVRRIAQKFVLPTSTKIDVSGVKIPATMTDDYFKRTKYFGK------EKKDIFE 70
Query: 641 TKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLK 763
K++Y ++ RK DQKT+D AV+ +I D K+L GYL+
Sbjct: 71 QGKQEYTLTDARKADQKTIDTAVLGSIKKHTDGKLLAGYLR 111
>UniRef50_A0CYT3 Cluster: 60S ribosomal protein L6; n=5;
Oligohymenophorea|Rep: 60S ribosomal protein L6 -
Paramecium tetraurelia
Length = 208
Score = 59.7 bits (138), Expect = 8e-08
Identities = 40/96 (41%), Positives = 55/96 (57%), Gaps = 8/96 (8%)
Frame = +3
Query: 246 QNSPLKRRK----SFYPTQEK----IRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHA 401
Q+ P K+R ++Y + ++ +R RP + +R+I P G V ILL+GR
Sbjct: 19 QSMPAKKRSVRIGNWYKSDDEKVHFVRKRKAPRPAT--LRKIVP----GQVLILLSGRFQ 72
Query: 402 GKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYV 509
GKRVV + L SGLLLVTGPF N PL+R+ YV
Sbjct: 73 GKRVVFLKQLKSGLLLVTGPFKINGVPLKRVNSAYV 108
>UniRef50_UPI0000DA1E66 Cluster: PREDICTED: similar to ribosomal
protein L6; n=5; Eutheria|Rep: PREDICTED: similar to
ribosomal protein L6 - Rattus norvegicus
Length = 112
Score = 57.6 bits (133), Expect = 3e-07
Identities = 37/85 (43%), Positives = 44/85 (51%)
Frame = +3
Query: 369 TVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVSAPPPEFHSATSN 548
TV I+L GRH GKRVV + L SGLLLVTGP A N PL R+ Q V + F
Sbjct: 13 TVLIILTGRHRGKRVVFLKQLGSGLLLVTGPLALNRVPLCRMHQSVVIS---TFTKVDIC 69
Query: 549 CQNTSMMITSRRIRSASNVQSNAKR 623
TS +T + S Q+ A R
Sbjct: 70 KVKTSKHLTDASFKKQSAAQAQAPR 94
>UniRef50_Q4Q4D3 Cluster: 60S ribosomal protein L6, putative; n=11;
Trypanosomatidae|Rep: 60S ribosomal protein L6, putative
- Leishmania major
Length = 195
Score = 53.6 bits (123), Expect = 5e-06
Identities = 26/58 (44%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Frame = +3
Query: 345 IRPNLKIGTVCILLAGRHAGKRVVLVGILP-SGLLLVTGPFAFNSCPLRRIPQRYVSA 515
+R + G + I+LAGR G+R V++ LP +G L+V+GP +N P+RRI RYV A
Sbjct: 29 LRKSCAPGAIAIILAGRFRGRRAVILKQLPHNGPLVVSGPMKYNGVPIRRIDSRYVIA 86
>UniRef50_A2EBD1 Cluster: 60S ribosomal protein L6, putative; n=7;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L6,
putative - Trichomonas vaginalis G3
Length = 151
Score = 46.8 bits (106), Expect = 6e-04
Identities = 23/56 (41%), Positives = 34/56 (60%)
Frame = +3
Query: 348 RPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVSA 515
RP+LK+GTV I++ G H GKR V+V +G++ + GP P+ I Q Y+ A
Sbjct: 53 RPSLKVGTVVIVVGGEHQGKRAVVVADQGAGIVKIAGPVV----PVNEISQDYLIA 104
>UniRef50_A5C5P0 Cluster: 60S ribosomal protein L6; n=1; Vitis
vinifera|Rep: 60S ribosomal protein L6 - Vitis vinifera
(Grape)
Length = 249
Score = 44.8 bits (101), Expect = 0.002
Identities = 22/37 (59%), Positives = 25/37 (67%)
Frame = +3
Query: 405 KRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVSA 515
KRVV + L SGLLL+TG F N PLRR+ Q YV A
Sbjct: 156 KRVVFLKQLSSGLLLITGSFKINGVPLRRVNQAYVIA 192
>UniRef50_Q8U2L5 Cluster: 50S ribosomal protein L14e; n=5;
Archaea|Rep: 50S ribosomal protein L14e - Pyrococcus
furiosus
Length = 83
Score = 41.9 bits (94), Expect = 0.017
Identities = 19/57 (33%), Positives = 34/57 (59%)
Frame = +3
Query: 351 PNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVSAPP 521
P + +G + +++AGR AG++VV+V I+ +LVTG N RR+ +++ P
Sbjct: 2 PAIDVGRIAVVIAGRRAGQKVVVVDIIDKNFVLVTGA-GLNKVKRRRMNIKHIEPLP 57
>UniRef50_Q8SR91 Cluster: 60S RIBOSOMAL PROTEIN L6; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L6 -
Encephalitozoon cuniculi
Length = 155
Score = 41.5 bits (93), Expect = 0.023
Identities = 28/75 (37%), Positives = 40/75 (53%)
Frame = +3
Query: 291 EKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAF 470
EK +A + +P VRR +L G V ++L G A +RVV + L + L GP +
Sbjct: 10 EKYKARTARKP---RVRRT--DLVKGMVVVVLEGVFASRRVVYLKGLEDNIALCAGPKSI 64
Query: 471 NSCPLRRIPQRYVSA 515
N PL RI +RY+ A
Sbjct: 65 NGIPLFRIDERYLLA 79
>UniRef50_A7QIH5 Cluster: Chromosome chr12 scaffold_103, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_103, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 345
Score = 39.9 bits (89), Expect = 0.069
Identities = 32/107 (29%), Positives = 50/107 (46%)
Frame = +3
Query: 276 FYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVT 455
FYP + ++ + +K ++ +R ++ GTV I+LAGR VV + L SGLLL+T
Sbjct: 207 FYPADD-VKKPLINKHKAKPIK-LRASITPGTVLIILAGR-----VVFLKQLSSGLLLIT 259
Query: 456 GPFAFNSCPLRRIPQRYVSAPPPEFHSATSNCQNTSMMITSRRIRSA 596
G F N P PP S + S ++ ++ R A
Sbjct: 260 GSFKINDVPHSFASSEATGFPPEIAREVYSASFSPSTLVQAQPWRIA 306
>UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia
lamblia ATCC 50803|Rep: 60S ribosomal protein L27 -
Giardia lamblia ATCC 50803
Length = 135
Score = 39.9 bits (89), Expect = 0.069
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = +3
Query: 348 RPNLKIGTVCILLAGRHAGKRVVLVGILP 434
+P +K G VCI+L GRHAGK+ V+V LP
Sbjct: 3 QPIIKPGLVCIVLQGRHAGKKAVIVEALP 31
>UniRef50_P54054 Cluster: 50S ribosomal protein L14e; n=8;
Euryarchaeota|Rep: 50S ribosomal protein L14e -
Methanococcus jannaschii
Length = 80
Score = 39.5 bits (88), Expect = 0.092
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = +3
Query: 351 PNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRI 494
P +++G VCI AGR AGK V+V IL ++V G C ++ +
Sbjct: 2 PAIEVGRVCIKTAGREAGKVCVIVDILDKNFVIVDGLVKRRRCNIKHL 49
>UniRef50_UPI0000DC20AA Cluster: UPI0000DC20AA related cluster; n=2;
Rattus norvegicus|Rep: UPI0000DC20AA UniRef100 entry -
Rattus norvegicus
Length = 261
Score = 38.3 bits (85), Expect = 0.21
Identities = 25/63 (39%), Positives = 34/63 (53%)
Frame = +3
Query: 321 PFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQ 500
P KH + + N TV I++ G+H +RVV + L G LL+TGP A N L R Q
Sbjct: 123 PAFKHEKAVC-NSTPETVLIIITGQH--RRVVFLKQLSRGFLLITGPLALNLVLLYRTHQ 179
Query: 501 RYV 509
+ V
Sbjct: 180 KSV 182
>UniRef50_A0EZZ8 Cluster: 60S ribosomal protein L6; n=5;
Euteleostomi|Rep: 60S ribosomal protein L6 -
Scophthalmus maximus (Turbot)
Length = 54
Score = 36.7 bits (81), Expect = 0.65
Identities = 19/39 (48%), Positives = 24/39 (61%)
Frame = +2
Query: 647 KEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLK 763
KEKY +EQRK DQK VD ++ + P LRGYL+
Sbjct: 3 KEKYQLTEQRKEDQKAVDAQLLTLVKKTPQ---LRGYLR 38
>UniRef50_A7E738 Cluster: Predicted protein; n=1; Sclerotinia
sclerotiorum 1980|Rep: Predicted protein - Sclerotinia
sclerotiorum 1980
Length = 331
Score = 35.5 bits (78), Expect = 1.5
Identities = 29/85 (34%), Positives = 42/85 (49%)
Frame = +3
Query: 513 APPPEFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIRR 692
AP S+TS+ QN S +SR ++++S+ S AKR K T SS+ P +R
Sbjct: 15 APSSTNGSSTSSAQNASGT-SSRTVKTSSS--SPAKRGDVKESSKPSRTVTASSSSPAKR 71
Query: 693 QSTRL*SKPSEPDPTRRCSADTSSG 767
SKPS T+ S+ S+G
Sbjct: 72 DDVNESSKPSR---TKAASSSNSAG 93
>UniRef50_Q8ZYB4 Cluster: 50S ribosomal protein L14e; n=14;
Archaea|Rep: 50S ribosomal protein L14e - Pyrobaculum
aerophilum
Length = 103
Score = 35.5 bits (78), Expect = 1.5
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +3
Query: 357 LKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRI 494
+ IG V + + GR AG++ V+V I+ +++TGP RR+
Sbjct: 5 IDIGRVVVKVLGREAGRKAVVVDIVDENYVVITGPKPITGVKRRRV 50
>UniRef50_A7ET80 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 752
Score = 35.1 bits (77), Expect = 2.0
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = +3
Query: 243 NQNSPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLK 362
N+ LK SF P + + ASS GRP K +R+R LK
Sbjct: 132 NREEELKAMVSFMPHRPAVDASSSGRPMKKDSKRMRNGLK 171
>UniRef50_Q7UL14 Cluster: Putative uncharacterized protein; n=2;
Bacteria|Rep: Putative uncharacterized protein -
Rhodopirellula baltica
Length = 84
Score = 34.3 bits (75), Expect = 3.4
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 6/58 (10%)
Frame = -1
Query: 168 FANELVFSLLV--EHLGFGETHHSVAQIIVPRFFR----RFFLSHRTCRCGSRLGRRF 13
FA EL FS++ EH+G T + P+ FR RF + R+CR G+R RRF
Sbjct: 20 FAGEL-FSVIARCEHIGGPNTDVDRRAVFWPKIFRFAAGRFQSTFRSCRVGARYSRRF 76
>UniRef50_Q9VHM8 Cluster: CG8136-PB, isoform B; n=3; Drosophila
melanogaster|Rep: CG8136-PB, isoform B - Drosophila
melanogaster (Fruit fly)
Length = 441
Score = 34.3 bits (75), Expect = 3.4
Identities = 22/70 (31%), Positives = 36/70 (51%)
Frame = +3
Query: 468 FNSCPLRRIPQRYVSAPPPEFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQK 647
+ P R + + V+ P + H+ + NCQ + + ++ SA+N Q + SLPQ
Sbjct: 39 YRRLPSRSLNRSQVTDVPTKGHTTSENCQLPAQELETK---SATNEQGALGIMSVSLPQT 95
Query: 648 KRNTFHLSSA 677
RN+ H SSA
Sbjct: 96 TRNS-HQSSA 104
>UniRef50_A6QSD0 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 906
Score = 34.3 bits (75), Expect = 3.4
Identities = 34/138 (24%), Positives = 61/138 (44%), Gaps = 5/138 (3%)
Frame = +3
Query: 285 TQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPF 464
+Q A S + + R I+ L + + +L+ RH R VL+ P P
Sbjct: 179 SQTSTPAGSSMKSAQQSQREIKHPLPVNSAAAVLSSRHNHGRAVLLR-RPKAESDHVEPL 237
Query: 465 AFNSCPLRRIPQR--YVSAPPPEFHSATSN--CQNTSMMITSRRIRSASNVQSNAKRVMT 632
+ C L R R ++ A P + N C N++ ++ +R++ N S AK
Sbjct: 238 PGSPC-LNRTTARPLHLRASHPAISNNDVNNMCSNSTSVVQGYSLRNSWNHNSFAKSQFE 296
Query: 633 SLPQ-KKRNTFHLSSAKP 683
+LP +R+T++ +S +P
Sbjct: 297 ALPLCPQRDTYYANSEEP 314
>UniRef50_Q4ZTN3 Cluster: Sensor protein; n=5; Pseudomonas|Rep:
Sensor protein - Pseudomonas syringae pv. syringae
(strain B728a)
Length = 676
Score = 33.9 bits (74), Expect = 4.6
Identities = 19/53 (35%), Positives = 31/53 (58%)
Frame = +3
Query: 315 GRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFN 473
GR ++ R++RP LK+ + + G +A V G L +G+ L+T PFAF+
Sbjct: 617 GRQLAEIARQLRPELKV----LFITG-YAEHAAVRGGFLDTGMQLITKPFAFD 664
>UniRef50_Q5KML3 Cluster: VpsB, putative; n=2; Basidiomycota|Rep:
VpsB, putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 686
Score = 33.5 bits (73), Expect = 6.0
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = -3
Query: 430 RIPTSTTLLPACLPARRMQTVPIFRLGRILRTCLLNGRPPDEARI 296
R+P+ L A L A R Q P ++ +++ T + NG PP+ AR+
Sbjct: 397 RVPSPNKLRLAILYALRYQKSPSAQIPQVVSTLISNGVPPERARL 441
>UniRef50_A6SQ32 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 681
Score = 33.1 bits (72), Expect = 8.0
Identities = 18/46 (39%), Positives = 25/46 (54%)
Frame = +3
Query: 225 R*EEWGNQNSPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLK 362
R EE+ N+ +K SF P + ASS GRP + +R+R LK
Sbjct: 126 RKEEF-NREEEIKAMVSFMPNRPAADASSSGRPMKRDSKRMRTGLK 170
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 778,158,043
Number of Sequences: 1657284
Number of extensions: 15927656
Number of successful extensions: 47209
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 44945
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47151
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 65438977305
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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