Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30848
(717 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q12874 Cluster: Splicing factor 3A subunit 3; n=31; Bil... 145 1e-33
UniRef50_A7T279 Cluster: Predicted protein; n=1; Nematostella ve... 125 1e-27
UniRef50_Q16EE4 Cluster: Splicing factor 3a; n=2; Culicidae|Rep:... 101 2e-20
UniRef50_Q6TUF1 Cluster: LRRGT00093; n=3; Eutheria|Rep: LRRGT000... 100 7e-20
UniRef50_Q22469 Cluster: Putative uncharacterized protein; n=5; ... 87 5e-16
UniRef50_Q9GUX4 Cluster: Putative splicesome associated protein ... 85 2e-15
UniRef50_Q9FG01 Cluster: Splicing factor 3a; n=6; Magnoliophyta|... 59 1e-07
UniRef50_O59706 Cluster: U2 snRNP-associated protein sap61; n=1;... 57 4e-07
UniRef50_A4QU30 Cluster: Putative uncharacterized protein; n=1; ... 55 2e-06
UniRef50_Q5KJJ3 Cluster: RNA splicing factor PRP9, putative; n=1... 49 1e-04
UniRef50_Q55CK7 Cluster: C2H2 type Zn finger-containing protein;... 48 2e-04
UniRef50_Q4P183 Cluster: Putative uncharacterized protein; n=1; ... 48 3e-04
UniRef50_A0DLK5 Cluster: Chromosome undetermined scaffold_55, wh... 45 0.002
UniRef50_Q7R8D2 Cluster: Splicing factor 3a subunit 3; n=1; Plas... 45 0.002
UniRef50_A4S8M6 Cluster: Predicted protein; n=2; Ostreococcus|Re... 43 0.007
UniRef50_Q6BPR8 Cluster: Similar to sp|P19736 Saccharomyces cere... 42 0.020
UniRef50_Q5CWK8 Cluster: Prp9p-like splicing factor 3a subunit 3... 40 0.046
UniRef50_UPI00006CFDC8 Cluster: splicesome-associated protein, p... 38 0.25
UniRef50_A2DYJ8 Cluster: Zinc finger, C2H2 type family protein; ... 38 0.33
UniRef50_A3LZB0 Cluster: Predicted protein; n=1; Pichia stipitis... 38 0.33
UniRef50_Q4QKW8 Cluster: Putative uncharacterized protein; n=3; ... 35 2.3
UniRef50_Q6LFH6 Cluster: Putative uncharacterized protein; n=1; ... 35 2.3
UniRef50_A4M9W3 Cluster: ATP synthase delta chain; n=1; Petrotog... 34 3.0
UniRef50_A7TQD9 Cluster: Putative uncharacterized protein; n=1; ... 34 3.0
UniRef50_UPI00006CB361 Cluster: hypothetical protein TTHERM_0065... 34 4.0
UniRef50_UPI0000498796 Cluster: zinc finger protein; n=1; Entamo... 34 4.0
UniRef50_A4AL53 Cluster: Putative uncharacterized protein; n=2; ... 33 5.3
UniRef50_Q4YLD3 Cluster: Putative uncharacterized protein; n=1; ... 33 5.3
UniRef50_Q8IKQ6 Cluster: Putative uncharacterized protein; n=2; ... 33 7.0
UniRef50_A7RV46 Cluster: Predicted protein; n=1; Nematostella ve... 33 7.0
UniRef50_Q7U8U5 Cluster: Putative uncharacterized protein; n=1; ... 33 9.3
UniRef50_A0CX83 Cluster: Chromosome undetermined scaffold_3, who... 33 9.3
UniRef50_Q6CJ80 Cluster: Similarity; n=2; Kluyveromyces lactis|R... 33 9.3
>UniRef50_Q12874 Cluster: Splicing factor 3A subunit 3; n=31;
Bilateria|Rep: Splicing factor 3A subunit 3 - Homo
sapiens (Human)
Length = 501
Score = 145 bits (351), Expect = 1e-33
Identities = 66/85 (77%), Positives = 72/85 (84%)
Frame = +2
Query: 254 KHPNEISVPMSVEFEELANQRENPAEDYTVPVEFTDEEGYGKYLDLHSCYEKYINLKGIE 433
KHPNEI VPMSVEFEEL RENP+E+ VEFTDEEGYG+YLDLH CY KYINLK E
Sbjct: 97 KHPNEICVPMSVEFEELLKARENPSEEAQNLVEFTDEEGYGRYLDLHDCYLKYINLKASE 156
Query: 434 KVDYITYLSIFDHLFDIPRERKNSE 508
K+DYITYLSIFD LFDIP+ERKN+E
Sbjct: 157 KLDYITYLSIFDQLFDIPKERKNAE 181
Score = 99.5 bits (237), Expect = 7e-20
Identities = 42/63 (66%), Positives = 55/63 (87%)
Frame = +3
Query: 66 RETINADHRLKNLHDRYIEASIRLKELYEDKDGLRKEEISALSGPHEFQEFYSRLKQIKE 245
R+ IN+DHR + + DRY+E S L++LY+DKDGLRKEE++A+SGP+EF EFY+RLKQIKE
Sbjct: 34 RDQINSDHRTRAMQDRYMEVSGNLRDLYDDKDGLRKEELNAISGPNEFAEFYNRLKQIKE 93
Query: 246 FHR 254
FHR
Sbjct: 94 FHR 96
Score = 90.2 bits (214), Expect = 4e-17
Identities = 39/67 (58%), Positives = 48/67 (71%)
Frame = +1
Query: 511 RNYIRALLTYMKDFVSRVKPLLDQAQEMALGHQEFLKQWESGTFPGWPKETGGALTNVGA 690
+ Y+ LL Y++D+ RVKPL DQ + EF K+WE+GTFPGWPKET ALT+ GA
Sbjct: 183 KRYLEMLLEYLQDYTDRVKPLQDQNELFGKIQAEFEKKWENGTFPGWPKETSSALTHAGA 242
Query: 691 HLDLSAF 711
HLDLSAF
Sbjct: 243 HLDLSAF 249
>UniRef50_A7T279 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 365
Score = 125 bits (301), Expect = 1e-27
Identities = 53/85 (62%), Positives = 66/85 (77%)
Frame = +2
Query: 254 KHPNEISVPMSVEFEELANQRENPAEDYTVPVEFTDEEGYGKYLDLHSCYEKYINLKGIE 433
K+PNE++ PM +EF + REN ED VEFTDEEGYGKYLDLH Y+KY+NLKGIE
Sbjct: 97 KYPNEVTEPMQMEFLRMKENRENNIEDNLPLVEFTDEEGYGKYLDLHEVYDKYLNLKGIE 156
Query: 434 KVDYITYLSIFDHLFDIPRERKNSE 508
K+DY+TYL FD LFDIP+++KN +
Sbjct: 157 KIDYLTYLDTFDRLFDIPKDKKNMD 181
Score = 87.8 bits (208), Expect = 2e-16
Identities = 38/60 (63%), Positives = 50/60 (83%)
Frame = +3
Query: 75 INADHRLKNLHDRYIEASIRLKELYEDKDGLRKEEISALSGPHEFQEFYSRLKQIKEFHR 254
INADHR +NL +R + A+ + LYED+DGLRKEE+S+LSGP+EF EFYSRL+ +KE+HR
Sbjct: 37 INADHRTRNLLERSVIAAESMANLYEDQDGLRKEEVSSLSGPNEFAEFYSRLRSLKEYHR 96
Score = 74.9 bits (176), Expect = 2e-12
Identities = 32/67 (47%), Positives = 43/67 (64%)
Frame = +1
Query: 511 RNYIRALLTYMKDFVSRVKPLLDQAQEMALGHQEFLKQWESGTFPGWPKETGGALTNVGA 690
+ Y+ +LL Y+ F RV+PL D +E++ +EF QW G FPGW K+ AL + GA
Sbjct: 183 KRYLESLLDYLYGFCERVQPLYDLTKELSKVGEEFEGQWAQGNFPGWQKDASSALAHTGA 242
Query: 691 HLDLSAF 711
HLDLSAF
Sbjct: 243 HLDLSAF 249
>UniRef50_Q16EE4 Cluster: Splicing factor 3a; n=2; Culicidae|Rep:
Splicing factor 3a - Aedes aegypti (Yellowfever
mosquito)
Length = 484
Score = 101 bits (241), Expect = 2e-20
Identities = 42/82 (51%), Positives = 61/82 (74%)
Frame = +2
Query: 257 HPNEISVPMSVEFEELANQRENPAEDYTVPVEFTDEEGYGKYLDLHSCYEKYINLKGIEK 436
H N +++P S+EF +L Q +PA V V+F+D E YG+YLDLH C++ Y+NLKG++K
Sbjct: 97 HGNNVAIPASIEFSKLREQLNDPAYLAEV-VKFSDVENYGQYLDLHECFDNYVNLKGVDK 155
Query: 437 VDYITYLSIFDHLFDIPRERKN 502
+DYITYLS F+ D+PR++KN
Sbjct: 156 IDYITYLSEFNRFADVPRKQKN 177
Score = 65.3 bits (152), Expect = 1e-09
Identities = 31/64 (48%), Positives = 45/64 (70%)
Frame = +3
Query: 66 RETINADHRLKNLHDRYIEASIRLKELYEDKDGLRKEEISALSGPHEFQEFYSRLKQIKE 245
++ + ADHR+K +RY S L ELY+DKDG RK+EI+ +S +EF+EFYS+ + E
Sbjct: 34 KDKVLADHRIKIYLERYQSCSKSLLELYQDKDGERKQEITNMS-VNEFKEFYSQFNSLVE 92
Query: 246 FHRN 257
FH+N
Sbjct: 93 FHQN 96
Score = 34.3 bits (75), Expect = 3.0
Identities = 13/50 (26%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +1
Query: 511 RNYIRALLTYMKDFVSRVKPLLDQAQEMALGHQ-EFLKQWESGTFPGWPK 657
+ Y+ L Y++ F++R +PL + + ++ +F W++G PGW +
Sbjct: 181 KKYLELLHDYLQGFITRSRPLFFELEHTVKRNELQFEDLWKNGEAPGWER 230
>UniRef50_Q6TUF1 Cluster: LRRGT00093; n=3; Eutheria|Rep: LRRGT00093
- Rattus norvegicus (Rat)
Length = 230
Score = 99.5 bits (237), Expect = 7e-20
Identities = 48/71 (67%), Positives = 53/71 (74%)
Frame = +2
Query: 254 KHPNEISVPMSVEFEELANQRENPAEDYTVPVEFTDEEGYGKYLDLHSCYEKYINLKGIE 433
KHPNEI VPMSVEFEEL RENP+E+ VEFTDEEGYG+YLDLH CY KYINLK E
Sbjct: 81 KHPNEICVPMSVEFEELLKARENPSEEAQNLVEFTDEEGYGRYLDLHDCYLKYINLKASE 140
Query: 434 KVDYITYLSIF 466
I +L+ F
Sbjct: 141 SFPGI-FLACF 150
Score = 83.0 bits (196), Expect = 7e-15
Identities = 37/60 (61%), Positives = 47/60 (78%)
Frame = +3
Query: 75 INADHRLKNLHDRYIEASIRLKELYEDKDGLRKEEISALSGPHEFQEFYSRLKQIKEFHR 254
+ A L RY+E S L++LY+DKDGLRKEE++A+SGP+EF EFY+RLKQIKEFHR
Sbjct: 21 VMAKEMLTKKSTRYMEVSGNLRDLYDDKDGLRKEELNAISGPNEFAEFYNRLKQIKEFHR 80
>UniRef50_Q22469 Cluster: Putative uncharacterized protein; n=5;
Bilateria|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 500
Score = 86.6 bits (205), Expect = 5e-16
Identities = 36/79 (45%), Positives = 59/79 (74%)
Frame = +2
Query: 254 KHPNEISVPMSVEFEELANQRENPAEDYTVPVEFTDEEGYGKYLDLHSCYEKYINLKGIE 433
++P+E++ P++VEF+++ + NP VEF+DEE YG++LDLH+ Y+K+INLK I+
Sbjct: 97 RNPDELAEPLTVEFQKINEEIINPERAEPDMVEFSDEEAYGRFLDLHAQYDKFINLKNIK 156
Query: 434 KVDYITYLSIFDHLFDIPR 490
+VDY+TYL F+ +IP+
Sbjct: 157 RVDYMTYLLNFEKFTEIPK 175
Score = 73.3 bits (172), Expect = 5e-12
Identities = 31/66 (46%), Positives = 45/66 (68%)
Frame = +3
Query: 57 LQHRETINADHRLKNLHDRYIEASIRLKELYEDKDGLRKEEISALSGPHEFQEFYSRLKQ 236
L H+ +N++ R+K DRY S L + Y+D+DG + E+ ++SGP+EF EFYSRLK
Sbjct: 31 LTHKAKVNSEQRVKTFVDRYYSVSAELAKFYKDEDGSKSMEMDSVSGPNEFAEFYSRLKV 90
Query: 237 IKEFHR 254
IK+ HR
Sbjct: 91 IKDAHR 96
Score = 33.9 bits (74), Expect = 4.0
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +1
Query: 511 RNYIRALLTYMKDFVSRVKPLLDQAQEMALGHQEFLKQWESGTFPGW 651
+ YI +L Y+ F+ R +PL D + +Q + +++G PGW
Sbjct: 185 KEYINSLKDYLVSFMQRTRPLHDLDSVFSEVNQTVERAFKAGNLPGW 231
>UniRef50_Q9GUX4 Cluster: Putative splicesome associated protein
CnSAP1; n=1; Hydra magnipapillata|Rep: Putative
splicesome associated protein CnSAP1 - Hydra
magnipapillata (Hydra)
Length = 125
Score = 84.6 bits (200), Expect = 2e-15
Identities = 34/56 (60%), Positives = 45/56 (80%)
Frame = +2
Query: 341 VPVEFTDEEGYGKYLDLHSCYEKYINLKGIEKVDYITYLSIFDHLFDIPRERKNSE 508
+ VEFTDEEG+GKYLDLH Y ++INLK IE +DY+TYL FD LF+I +++KN +
Sbjct: 3 IMVEFTDEEGFGKYLDLHEAYTQFINLKNIEHIDYLTYLMTFDRLFEISKDKKNHD 58
Score = 66.9 bits (156), Expect = 5e-10
Identities = 29/64 (45%), Positives = 43/64 (67%)
Frame = +1
Query: 514 NYIRALLTYMKDFVSRVKPLLDQAQEMALGHQEFLKQWESGTFPGWPKETGGALTNVGAH 693
NY+ L+ Y+ F+ R KPLL+ +E+ +F ++++G+F GWPKE G ALT+ GA
Sbjct: 61 NYLNTLIDYLYHFLQRAKPLLNLEKELKEALDDFNSKFDAGSFIGWPKEAGSALTHAGAL 120
Query: 694 LDLS 705
LDLS
Sbjct: 121 LDLS 124
>UniRef50_Q9FG01 Cluster: Splicing factor 3a; n=6;
Magnoliophyta|Rep: Splicing factor 3a - Arabidopsis
thaliana (Mouse-ear cress)
Length = 504
Score = 58.8 bits (136), Expect = 1e-07
Identities = 34/95 (35%), Positives = 51/95 (53%)
Frame = +2
Query: 254 KHPNEISVPMSVEFEELANQRENPAEDYTVPVEFTDEEGYGKYLDLHSCYEKYINLKGIE 433
+HP+ V + ++E A +E P + F+ EEG G+YLDLH Y +YIN K E
Sbjct: 103 RHPSGRLVDANEDYE--ARLKEEPI------IAFSGEEGNGRYLDLHDMYNQYINSKFGE 154
Query: 434 KVDYITYLSIFDHLFDIPRERKNSETGITFVHCSL 538
+V+Y YL +F IPR+ K S + ++ L
Sbjct: 155 RVEYSAYLDVFSQPEKIPRKLKLSRQYMKYMEALL 189
Score = 52.4 bits (120), Expect = 1e-05
Identities = 25/61 (40%), Positives = 41/61 (67%), Gaps = 5/61 (8%)
Frame = +3
Query: 87 HRLKNLHDRYIEASIRLKELYEDKDGLRKEEISAL-----SGPHEFQEFYSRLKQIKEFH 251
HR++++ + + + +L E YEDKDG +EI+AL +G + F EFY RLK+I+E+H
Sbjct: 42 HRVRHMIESIMLTTEKLVETYEDKDGAWDDEIAALGGQTATGTNVFSEFYDRLKEIREYH 101
Query: 252 R 254
+
Sbjct: 102 K 102
>UniRef50_O59706 Cluster: U2 snRNP-associated protein sap61; n=1;
Schizosaccharomyces pombe|Rep: U2 snRNP-associated
protein sap61 - Schizosaccharomyces pombe (Fission
yeast)
Length = 492
Score = 57.2 bits (132), Expect = 4e-07
Identities = 23/58 (39%), Positives = 37/58 (63%)
Frame = +2
Query: 353 FTDEEGYGKYLDLHSCYEKYINLKGIEKVDYITYLSIFDHLFDIPRERKNSETGITFV 526
F EE YG+++DL+ CYE+YINL ++ + Y+ YL + IP+ KN +T I ++
Sbjct: 127 FRGEEMYGRFMDLNECYEEYINLSNVQHISYLEYLKNLEDFDQIPKPEKN-QTYINYI 183
Score = 43.6 bits (98), Expect = 0.005
Identities = 18/63 (28%), Positives = 36/63 (57%)
Frame = +3
Query: 66 RETINADHRLKNLHDRYIEASIRLKELYEDKDGLRKEEISALSGPHEFQEFYSRLKQIKE 245
RE + +H+ +++ E S +L +E D L+ +E++ ++ + EFY L +I+E
Sbjct: 35 RERLRLEHQSAQFLNQFRETSKKLLVSHESSDRLKDQEVARINADDDLTEFYKSLGEIQE 94
Query: 246 FHR 254
FH+
Sbjct: 95 FHK 97
Score = 35.1 bits (77), Expect = 1.7
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = +1
Query: 514 NYIRALLTYMKDFVSRVKPLLDQAQEMALGHQEFLKQWESGTFPGW 651
NYI L Y+ F R PL + + +A+ EF WE+G PGW
Sbjct: 181 NYITHLYEYLVSFYRRTHPLSNLDKIIAVFDTEFDAAWEAG-LPGW 225
>UniRef50_A4QU30 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 521
Score = 54.8 bits (126), Expect = 2e-06
Identities = 24/62 (38%), Positives = 38/62 (61%)
Frame = +3
Query: 66 RETINADHRLKNLHDRYIEASIRLKELYEDKDGLRKEEISALSGPHEFQEFYSRLKQIKE 245
R+ +N DH + L ++ + S L +YED +GLR +EI A+ F EFY ++++IKE
Sbjct: 32 RDRLNRDHEVAQLLEQIQKQSSELISMYEDVNGLRSKEIQAIGSGDPFDEFYKQVEEIKE 91
Query: 246 FH 251
H
Sbjct: 92 HH 93
Score = 52.8 bits (121), Expect = 8e-06
Identities = 21/50 (42%), Positives = 33/50 (66%)
Frame = +2
Query: 320 NPAEDYTVPVEFTDEEGYGKYLDLHSCYEKYINLKGIEKVDYITYLSIFD 469
+PA+ Y V + F+ EE +GK+ DL + +E YINL ++ Y+ YL +FD
Sbjct: 116 DPAQPYMVDMIFSGEEAFGKFFDLLAAHEAYINLPNVKHRSYLQYLEVFD 165
>UniRef50_Q5KJJ3 Cluster: RNA splicing factor PRP9, putative; n=1;
Filobasidiella neoformans|Rep: RNA splicing factor PRP9,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 513
Score = 48.8 bits (111), Expect = 1e-04
Identities = 18/40 (45%), Positives = 28/40 (70%)
Frame = +2
Query: 353 FTDEEGYGKYLDLHSCYEKYINLKGIEKVDYITYLSIFDH 472
F+ EE YGK+LDL+ + +Y+NLKG ++ Y+ YL + H
Sbjct: 144 FSGEEAYGKHLDLYLSHSQYLNLKGSTRLSYVAYLDMLKH 183
Score = 41.5 bits (93), Expect = 0.020
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Frame = +3
Query: 66 RETINADHRLKNLHDRYIEASIRLKELYEDKDGLRKEEISALSGP----HEFQEFYSRLK 233
+ + D + + R L E YED GLR E++ LS P + EFY+R
Sbjct: 34 KNVVRRDRKAAEILGRIGTLRKELVEQYEDIPGLRPRELALLSAPAPGEDDLAEFYTRFN 93
Query: 234 QIKEFH-RNI 260
+IK+FH RN+
Sbjct: 94 KIKDFHSRNV 103
Score = 35.9 bits (79), Expect = 1.00
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +1
Query: 517 YIRALLTYMKDFVSRVKPLLDQAQEMALGHQEFLKQWESGTFPGWPKETGGA 672
Y++ L TY+ F R PL++ +++ Q F WE+ GW E GA
Sbjct: 203 YVQTLYTYLLSFFERALPLVNIQKKIKEEEQRFETAWEADQIDGW--ENSGA 252
>UniRef50_Q55CK7 Cluster: C2H2 type Zn finger-containing protein;
n=1; Dictyostelium discoideum AX4|Rep: C2H2 type Zn
finger-containing protein - Dictyostelium discoideum AX4
Length = 544
Score = 48.0 bits (109), Expect = 2e-04
Identities = 27/64 (42%), Positives = 37/64 (57%), Gaps = 5/64 (7%)
Frame = +2
Query: 290 EFEELANQRENPAEDYTVPVEFTDEEGYGKYLDLHSCYEKYINL-----KGIEKVDYITY 454
+F L +R N +T + FT E GK+LDL+ YEKYINL K I +DY+TY
Sbjct: 100 KFPNLKEERNNEPLIFTPSISFTGNEMNGKFLDLNENYEKYINLSFNRNKSI-NLDYLTY 158
Query: 455 LSIF 466
L+ +
Sbjct: 159 LTSY 162
Score = 47.6 bits (108), Expect = 3e-04
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Frame = +3
Query: 66 RETINADHRLKNLHDRYIEASIRLKELYEDKDGLRKEEISALS--GPHEFQEFYSRLKQI 239
+E + HR+ + + IE S L +Y D D RK+E++++S G + FY +L++I
Sbjct: 35 KERVLQSHRVNHYLNSSIECSKSLINIYTDSDHSRKDELTSISGFGTDLYSSFYEKLREI 94
Query: 240 KEFHR 254
K++HR
Sbjct: 95 KDYHR 99
Score = 33.5 bits (73), Expect = 5.3
Identities = 10/44 (22%), Positives = 24/44 (54%)
Frame = +1
Query: 511 RNYIRALLTYMKDFVSRVKPLLDQAQEMALGHQEFLKQWESGTF 642
++Y+ ++ Y+ F+ R +PL + + EF+++W + F
Sbjct: 179 KDYLESVYKYLIHFIERTQPLFELQSSITKSENEFIEKWNNNEF 222
>UniRef50_Q4P183 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 565
Score = 47.6 bits (108), Expect = 3e-04
Identities = 18/41 (43%), Positives = 30/41 (73%)
Frame = +2
Query: 353 FTDEEGYGKYLDLHSCYEKYINLKGIEKVDYITYLSIFDHL 475
F+ EE G++LDL+ +E Y+NLKG++++ Y+ Y+ FD L
Sbjct: 156 FSGEEMAGRFLDLYLHHEAYLNLKGVKRISYLAYIDDFDKL 196
Score = 37.9 bits (84), Expect = 0.25
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = +3
Query: 57 LQHRETINADHRLKNLHDRYIEASIRLKELYEDKDGLRKEEISALSGPH---EFQEFYSR 227
L H++ + H +L DR L Y D+ R+ E+ +LS EFY R
Sbjct: 38 LTHKDKLKRAHEASDLLDRVTSRYQYLDRFYTDEHQERQRELESLSSARADDALGEFYER 97
Query: 228 LKQIKEFH 251
L +++E+H
Sbjct: 98 LARVREYH 105
>UniRef50_A0DLK5 Cluster: Chromosome undetermined scaffold_55, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_55,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 491
Score = 45.2 bits (102), Expect = 0.002
Identities = 21/58 (36%), Positives = 36/58 (62%), Gaps = 6/58 (10%)
Frame = +2
Query: 353 FTDEEGYGKYLDLHSCYEKYINLKGIEKV------DYITYLSIFDHLFDIPRERKNSE 508
F+ EE +G++LD+H+ Y++++NLK +++ DY+ YL F + DIP K E
Sbjct: 121 FSGEEHHGRFLDMHASYKEFLNLKKLKESNKIKIGDYLWYLQNFQNFHDIPLYIKEKE 178
Score = 39.9 bits (89), Expect = 0.061
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Frame = +3
Query: 42 IMVMFLQHR-ETINADHRLKNLHDRYIEASIRLKELYEDKDGLRKEEISALSGP----HE 206
I V+ HR + DHR+ NL + + L + DG +KEE++ L G
Sbjct: 16 IEVIEKTHRYSAVLLDHRIHNLIQMAQKTAADALILIDGADGWKKEEMNYLQGVGGSGDV 75
Query: 207 FQEFYSRLKQIKEFHRNI 260
++ FY R K+IK++H+ +
Sbjct: 76 WENFYERFKEIKDYHKRV 93
Score = 36.3 bits (80), Expect = 0.76
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +1
Query: 511 RNYIRALLTYMKDFVSRVKPLLDQAQEMALGHQEFLKQWESGTFPGW 651
+ Y+ +L Y++ F RV PL D ++ +F QWE+G GW
Sbjct: 183 KRYLINMLEYLRSFYLRVNPLQDVSKIEQKIDIDFQTQWENGQVKGW 229
>UniRef50_Q7R8D2 Cluster: Splicing factor 3a subunit 3; n=1;
Plasmodium yoelii yoelii|Rep: Splicing factor 3a subunit
3 - Plasmodium yoelii yoelii
Length = 585
Score = 44.8 bits (101), Expect = 0.002
Identities = 23/74 (31%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Frame = +3
Query: 63 HRETINADHRLKNLHDRYIEASIRLKELYEDKDGLRKEEISALSGPHE-----FQEFYSR 227
+++ I D+ + L ++ S +L E+Y+D D L+KEEI +SG ++ +Y R
Sbjct: 34 NKKHIFYDYCINYLVEKIQNKSKQLVEIYKDDDNLKKEEIQFISGKTNEENDVWKNYYER 93
Query: 228 LKQIKEFHRNIQMK 269
+K IK++H+ +K
Sbjct: 94 IKYIKDYHKKTNIK 107
>UniRef50_A4S8M6 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 517
Score = 43.2 bits (97), Expect = 0.007
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Frame = +1
Query: 514 NYIRALLTYMKDFVSRVKPLLDQAQEMALGHQEFLKQWESGTFPGWPKETGGA-----LT 678
+Y+ ALL Y++ F R PL + +A +EF ++W+ G PGW E GG T
Sbjct: 179 DYLDALLAYLRSFHERAIPLQFVHKALAQDAEEFERRWKKGECPGW--EDGGVRAVDEKT 236
Query: 679 NVGAHLDLSAF 711
+ +DLSAF
Sbjct: 237 LESSAVDLSAF 247
Score = 41.1 bits (92), Expect = 0.027
Identities = 19/49 (38%), Positives = 26/49 (53%)
Frame = +2
Query: 353 FTDEEGYGKYLDLHSCYEKYINLKGIEKVDYITYLSIFDHLFDIPRERK 499
F+ EE G+YLDLH + Y N E+ DY YL + + PR +K
Sbjct: 124 FSGEENSGRYLDLHESHMTYANATFGERCDYSEYLERCGNFAETPRSKK 172
>UniRef50_Q6BPR8 Cluster: Similar to sp|P19736 Saccharomyces
cerevisiae YDL030w PRP9 pre-mRNA splicing factor; n=1;
Debaryomyces hansenii|Rep: Similar to sp|P19736
Saccharomyces cerevisiae YDL030w PRP9 pre-mRNA splicing
factor - Debaryomyces hansenii (Yeast) (Torulaspora
hansenii)
Length = 518
Score = 41.5 bits (93), Expect = 0.020
Identities = 20/41 (48%), Positives = 26/41 (63%)
Frame = +2
Query: 353 FTDEEGYGKYLDLHSCYEKYINLKGIEKVDYITYLSIFDHL 475
FT +E YGKYLDL YE Y ++ V Y+ YLSI+D +
Sbjct: 170 FTPDELYGKYLDLFPFYETYKSIVD-HNVTYVEYLSIYDQV 209
>UniRef50_Q5CWK8 Cluster: Prp9p-like splicing factor 3a subunit 3
snRNP. C-terminal C2H2; n=3; Cryptosporidium|Rep:
Prp9p-like splicing factor 3a subunit 3 snRNP.
C-terminal C2H2 - Cryptosporidium parvum Iowa II
Length = 493
Score = 40.3 bits (90), Expect = 0.046
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +1
Query: 517 YIRALLTYMKDFVSRVKPLLDQAQEMALGHQEFLKQWESGTFPGW 651
YI LL Y++DF R+ PLLD+ +++F ++W +G W
Sbjct: 172 YITNLLEYLRDFFLRIHPLLDEGTIQTELNKDFEEEWRNGMLSDW 216
>UniRef50_UPI00006CFDC8 Cluster: splicesome-associated protein,
putative; n=1; Tetrahymena thermophila SB210|Rep:
splicesome-associated protein, putative - Tetrahymena
thermophila SB210
Length = 521
Score = 37.9 bits (84), Expect = 0.25
Identities = 14/47 (29%), Positives = 28/47 (59%)
Frame = +1
Query: 511 RNYIRALLTYMKDFVSRVKPLLDQAQEMALGHQEFLKQWESGTFPGW 651
+ Y++ L+ Y+K+F + +PL + + Q+F +W+ G+ PGW
Sbjct: 203 KQYLQNLINYLKEFFLKTQPLTEFSIIDRQIQQDFEYRWKEGSIPGW 249
Score = 35.9 bits (79), Expect = 1.00
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 10/76 (13%)
Frame = +3
Query: 66 RETINADHRLKNLHDRYIEASIRLKELYEDKDGLRKEEISALSG----------PHEFQE 215
++ + D++LKNL + + L +D DG++KEE++ L G P +
Sbjct: 35 KDQVIIDNKLKNLIEMKQSKCMDALILLQDFDGVKKEEMAILEGKKSVSAGTRQPDIWYN 94
Query: 216 FYSRLKQIKEFHRNIQ 263
F RLK IKE+++ Q
Sbjct: 95 FQQRLKDIKEYYKKHQ 110
Score = 33.9 bits (74), Expect = 4.0
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 11/69 (15%)
Frame = +2
Query: 335 YTVPVEFTDEEGYGKYLDLHSCYEKYIN--LKGIEKV---------DYITYLSIFDHLFD 481
Y+ P+ TDE+ GKY+D++ Y ++++ LK +KV DY+ YL FD +
Sbjct: 131 YSEPLFSTDEQ-QGKYVDMNVLYYEFLSFDLKKKKKVRLSEDYHIGDYLWYLEKFDAFHE 189
Query: 482 IPRERKNSE 508
IP K E
Sbjct: 190 IPLALKQKE 198
>UniRef50_A2DYJ8 Cluster: Zinc finger, C2H2 type family protein;
n=1; Trichomonas vaginalis G3|Rep: Zinc finger, C2H2
type family protein - Trichomonas vaginalis G3
Length = 507
Score = 37.5 bits (83), Expect = 0.33
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 7/81 (8%)
Frame = +2
Query: 290 EFEELANQRENPAEDYTVPVE-------FTDEEGYGKYLDLHSCYEKYINLKGIEKVDYI 448
+F+E +R N + TV E F+ EE YG +LDL+ + +YIN+ + Y+
Sbjct: 141 QFQEEKERRRNKKKKKTVISETDEALTKFSGEECYGMFLDLNELHSQYINITK-TSISYL 199
Query: 449 TYLSIFDHLFDIPRERKNSET 511
+L I D K+ +T
Sbjct: 200 EFLEILQKSNDFSNLPKSEQT 220
>UniRef50_A3LZB0 Cluster: Predicted protein; n=1; Pichia
stipitis|Rep: Predicted protein - Pichia stipitis
(Yeast)
Length = 530
Score = 37.5 bits (83), Expect = 0.33
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +2
Query: 353 FTDEEGYGKYLDLHSCYEKYINLKGIEKVDYITYLSIFD 469
++ EE YGKYLDL +E Y N + V Y+ YL +FD
Sbjct: 185 YSTEEVYGKYLDLTKFHEIYRN-QTSSNVSYLEYLKVFD 222
>UniRef50_Q4QKW8 Cluster: Putative uncharacterized protein; n=3;
Haemophilus influenzae|Rep: Putative uncharacterized
protein - Haemophilus influenzae (strain 86-028NP)
Length = 129
Score = 34.7 bits (76), Expect = 2.3
Identities = 19/74 (25%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Frame = +3
Query: 36 YIIMVMFLQHRETINADHR---LKNLHDRYIEASIRLKELYEDKDGLRKEEISALSGPHE 206
+I+ ++++QH +N + + + +LH++ I+ + EL+ED D RK L+
Sbjct: 34 FILALLYMQHTNKLNIERQSAVIDSLHEKVIKRDKIIDELHEDVDEQRKIAEKRLAQEQL 93
Query: 207 FQE-FYSRLKQIKE 245
+E Y++++ IK+
Sbjct: 94 IREQSYAQIQSIKK 107
>UniRef50_Q6LFH6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 6077
Score = 34.7 bits (76), Expect = 2.3
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Frame = -3
Query: 499 LPFTRYVKEMIKYAQVC---NIIYFLNTFQVNVLFITRM*VQILSIAF-FISELDRNCVI 332
L R +K +IKY +C N ++ T ++N+LF +L I F + S+ I
Sbjct: 280 LEIDRIIKFLIKYDDICDQINYVFNYKTHKINILF------NLLDILFLYFSKFQATTQI 333
Query: 331 LSRIFPLICQL 299
+SRIF L+ L
Sbjct: 334 ISRIFKLLNHL 344
>UniRef50_A4M9W3 Cluster: ATP synthase delta chain; n=1; Petrotoga
mobilis SJ95|Rep: ATP synthase delta chain - Petrotoga
mobilis SJ95
Length = 190
Score = 34.3 bits (75), Expect = 3.0
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = +3
Query: 108 DRYIEASIRLKELYEDKDGLRKEEISALSGPHEFQEFYSRLKQIKEFHRNIQMKYL 275
D Y+EA RLK+ E + LR S L P + SR+K + EF I +++L
Sbjct: 29 DEYVEAFQRLKKALESSESLRDMVYSPLIPP---KHIVSRMKDVSEFDDTIFVQFL 81
>UniRef50_A7TQD9 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 517
Score = 34.3 bits (75), Expect = 3.0
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +2
Query: 353 FTDEEGYGKYLDLHSCYEKYINLKGIEKVDYITYLSIFDHLFD 481
FT +E YG+YL+L Y ++N+ + Y+SI + D
Sbjct: 171 FTRDEQYGEYLELERFYNNWLNVIKSANCSILQYMSIIEKFLD 213
>UniRef50_UPI00006CB361 Cluster: hypothetical protein
TTHERM_00657370; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00657370 - Tetrahymena
thermophila SB210
Length = 555
Score = 33.9 bits (74), Expect = 4.0
Identities = 22/95 (23%), Positives = 46/95 (48%), Gaps = 7/95 (7%)
Frame = +3
Query: 12 HILHTMLKYIIMVMFLQHRETI---NADHRLKNLHDRYIEASIRL----KELYEDKDGLR 170
H+ +Y + +QH E + + ++ + D+++ RL +E+YE + L+
Sbjct: 39 HLRVIQFEYQALQEGIQHLENMIQYSVENHENLVRDKFLVKKNRLSRKKREIYEQEQQLQ 98
Query: 171 KEEISALSGPHEFQEFYSRLKQIKEFHRNIQMKYL 275
++E+ P + + L Q+KEFH + +YL
Sbjct: 99 RQEMELNQNPQIKKALFD-LSQLKEFHERKEKQYL 132
>UniRef50_UPI0000498796 Cluster: zinc finger protein; n=1; Entamoeba
histolytica HM-1:IMSS|Rep: zinc finger protein -
Entamoeba histolytica HM-1:IMSS
Length = 460
Score = 33.9 bits (74), Expect = 4.0
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Frame = +3
Query: 69 ETINADHRLKNLHDRYIEASIRLKELYEDKDGLRKEEISALSGPHEFQE----FYSRLKQ 236
+ I +H + L+ + + L LYEDK+G ++EE+ +SG + FY ++Q
Sbjct: 34 DKIKNEHIIMKLNHEINQRTGELISLYEDKNGKKEEELQMISGNGNTTDLLKIFYQGIEQ 93
Query: 237 IK 242
IK
Sbjct: 94 IK 95
>UniRef50_A4AL53 Cluster: Putative uncharacterized protein; n=2;
Actinobacteria (class)|Rep: Putative uncharacterized
protein - marine actinobacterium PHSC20C1
Length = 221
Score = 33.5 bits (73), Expect = 5.3
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +2
Query: 266 EISVPMSVEFEELANQRENPAEDYTVPVEFTDEE 367
++++P+ VEF+EL E+ A DYTV E+ D E
Sbjct: 113 DVTMPVKVEFQELFAYSEDEAFDYTVIDEYVDLE 146
>UniRef50_Q4YLD3 Cluster: Putative uncharacterized protein; n=1;
Plasmodium berghei|Rep: Putative uncharacterized protein
- Plasmodium berghei
Length = 80
Score = 33.5 bits (73), Expect = 5.3
Identities = 17/59 (28%), Positives = 24/59 (40%)
Frame = +3
Query: 102 LHDRYIEASIRLKELYEDKDGLRKEEISALSGPHEFQEFYSRLKQIKEFHRNIQMKYLY 278
+H +YI DKD L+KE + + +E Y L I + I M Y Y
Sbjct: 1 MHKQYINVDFFFSSFNSDKDNLKKETQERIIFAEKCKELYENLSHISGEYVKIYMFYFY 59
>UniRef50_Q8IKQ6 Cluster: Putative uncharacterized protein; n=2;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium falciparum (isolate 3D7)
Length = 3018
Score = 33.1 bits (72), Expect = 7.0
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 6/61 (9%)
Frame = +2
Query: 314 RENPAEDYTVPVEFTDEEGYGKYLDLHSCYEKYINLKGIEKV------DYITYLSIFDHL 475
+EN D+ + E++D+E KY+ YE IN++GI KV DY+ LS+ L
Sbjct: 377 KENHLYDFILNYEYSDDEKKKKYI-----YENGINIQGISKVEFNLHNDYLLILSVNGEL 431
Query: 476 F 478
+
Sbjct: 432 Y 432
>UniRef50_A7RV46 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 400
Score = 33.1 bits (72), Expect = 7.0
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Frame = +2
Query: 338 TVPVE----FTDEEGYGKYLDLHSCYEKYINLKGIEKVDYITYLSIFDHLFDIPRE 493
TVP+E +TDEE K + + +KY++ +V Y+ +FD + ++ R+
Sbjct: 219 TVPIELGLRYTDEEWTQKLMTISEFVDKYVSCSNSSQVAYLAQHQLFDQIPELRRD 274
>UniRef50_Q7U8U5 Cluster: Putative uncharacterized protein; n=1;
Synechococcus sp. WH 8102|Rep: Putative uncharacterized
protein - Synechococcus sp. (strain WH8102)
Length = 335
Score = 32.7 bits (71), Expect = 9.3
Identities = 19/59 (32%), Positives = 36/59 (61%)
Frame = +3
Query: 87 HRLKNLHDRYIEASIRLKELYEDKDGLRKEEISALSGPHEFQEFYSRLKQIKEFHRNIQ 263
++L +H R EA R+ L ED+ GL ++++ +L G QEF ++K+++ RN++
Sbjct: 278 NQLMTMHRRLREAGERIGALKEDQAGL-EQKVESLEG--SLQEFKRKVKRLRIKLRNLK 333
>UniRef50_A0CX83 Cluster: Chromosome undetermined scaffold_3, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_3,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 706
Score = 32.7 bits (71), Expect = 9.3
Identities = 18/69 (26%), Positives = 36/69 (52%)
Frame = +2
Query: 308 NQRENPAEDYTVPVEFTDEEGYGKYLDLHSCYEKYINLKGIEKVDYITYLSIFDHLFDIP 487
NQR NP +V + + E Y ++++C+++ +L G +V+ T L+ D +++
Sbjct: 51 NQR-NPQFSTSVQLNYQFETSYKVLFEVYNCHQEKKHLIGYTEVNIQTLLAAKDQIYNTD 109
Query: 488 RERKNSETG 514
KN + G
Sbjct: 110 ICNKNKKVG 118
>UniRef50_Q6CJ80 Cluster: Similarity; n=2; Kluyveromyces lactis|Rep:
Similarity - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 902
Score = 32.7 bits (71), Expect = 9.3
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +1
Query: 139 KNCMKIKMDYEKKKYQHCQVHMSSRSSIRDLSKLKS 246
KNC K+D EKK+Y H V +S+ +++K +S
Sbjct: 580 KNCCGFKLDTEKKRYVHTAVKRVKANSLPNIAKPES 615
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 710,644,035
Number of Sequences: 1657284
Number of extensions: 14092305
Number of successful extensions: 39951
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 38228
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39919
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57851245060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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