Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30848
         (717 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    26   0.35 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.61 
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    25   0.81 
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   3.3  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   3.3  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   3.3  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   3.3  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    22   5.7  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   7.6  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   7.6  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 25.8 bits (54), Expect = 0.35
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = +1

Query: 508 NRNYIRALLTYMKDFVSRVKPLLDQAQEMALGHQEFLK 621
           N+ Y    +++  DF+ + K LL  A+++ALG +   K
Sbjct: 573 NKTYDFHNMSFENDFIIQPKHLLSIARQVALGMEHLAK 610


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.0 bits (52), Expect = 0.61
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -1

Query: 180 FLLFVIHLYLHTIL*VL*RLQYIYH 106
           F++F IHL  + +L +L  + Y Y+
Sbjct: 219 FIIFTIHLLFYCVLIILLCIYYFYY 243



 Score = 21.8 bits (44), Expect = 5.7
 Identities = 15/43 (34%), Positives = 18/43 (41%)
 Frame = +1

Query: 1   FFFCIYYILC*NIL*WLCFFSIGRL*MLIIV*RIYMIDILKPL 129
           F  CIYY  C  I+  LC +   R   +I     Y    L PL
Sbjct: 281 FLLCIYYFYCALII-LLCIYYFCRA-FIIFPTHFYCAFSLYPL 321


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 24.6 bits (51), Expect = 0.81
 Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
 Frame = +3

Query: 123 ASIRLKELYEDKDG--LRKEEISALSGPHEFQEFYSRLKQIKE 245
           A+IR+  +    +G  +R  ++   SGPH+FQ    RL + K+
Sbjct: 181 AAIRINNILFSAEGVEIRIPDVIKTSGPHKFQPLL-RLPKFKK 222


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 55  NITIIIYFSIVCSICK 8
           NI  I++F +VC  CK
Sbjct: 950 NIIPILFFMLVCFTCK 965


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 55  NITIIIYFSIVCSICK 8
           NI  I++F +VC  CK
Sbjct: 950 NIIPILFFMLVCFTCK 965


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 55  NITIIIYFSIVCSICK 8
           NI  I++F +VC  CK
Sbjct: 950 NIIPILFFMLVCFTCK 965


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 55  NITIIIYFSIVCSICK 8
           NI  I++F +VC  CK
Sbjct: 950 NIIPILFFMLVCFTCK 965


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 7/10 (70%), Positives = 10/10 (100%)
 Frame = +1

Query: 541 MKDFVSRVKP 570
           +KD+VSR+KP
Sbjct: 466 LKDYVSRIKP 475


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/25 (28%), Positives = 12/25 (48%)
 Frame = +1

Query: 595 ALGHQEFLKQWESGTFPGWPKETGG 669
           ++ H +  + W + T   W KE  G
Sbjct: 257 SITHNDDERFWSNATVDDWAKEMAG 281


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/25 (28%), Positives = 17/25 (68%)
 Frame = -3

Query: 475 EMIKYAQVCNIIYFLNTFQVNVLFI 401
           +++K  ++   +Y+L  F +NVL++
Sbjct: 88  KLLKGRKIRKNLYYLLLFVINVLYV 112


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,624
Number of Sequences: 336
Number of extensions: 4025
Number of successful extensions: 17
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19051215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)