Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30848
(717 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66524-1|CAA91420.2| 500|Caenorhabditis elegans Hypothetical pr... 87 2e-17
AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein. 33 0.27
AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (droso... 33 0.27
AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (droso... 33 0.27
AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (droso... 33 0.27
AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (droso... 33 0.27
AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein. 33 0.27
AC006713-4|AAK68404.1| 321|Caenorhabditis elegans Hypothetical ... 31 1.1
Z50872-4|CAA90757.2| 498|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z69646-7|CAA93471.3| 1484|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z68493-4|CAA92791.1| 520|Caenorhabditis elegans Hypothetical pr... 29 4.4
AF003144-1|AAB54196.2| 235|Caenorhabditis elegans Hypothetical ... 29 4.4
Z98866-21|CAD56612.1| 743|Caenorhabditis elegans Hypothetical p... 28 5.8
Z98866-20|CAB11567.1| 734|Caenorhabditis elegans Hypothetical p... 28 5.8
Z81530-6|CAB04310.1| 329|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z78065-5|CAB01515.1| 954|Caenorhabditis elegans Hypothetical pr... 28 7.7
U41107-6|AAC71165.3| 340|Caenorhabditis elegans Hypothetical pr... 28 7.7
>Z66524-1|CAA91420.2| 500|Caenorhabditis elegans Hypothetical
protein T13H5.4 protein.
Length = 500
Score = 86.6 bits (205), Expect = 2e-17
Identities = 36/79 (45%), Positives = 59/79 (74%)
Frame = +2
Query: 254 KHPNEISVPMSVEFEELANQRENPAEDYTVPVEFTDEEGYGKYLDLHSCYEKYINLKGIE 433
++P+E++ P++VEF+++ + NP VEF+DEE YG++LDLH+ Y+K+INLK I+
Sbjct: 97 RNPDELAEPLTVEFQKINEEIINPERAEPDMVEFSDEEAYGRFLDLHAQYDKFINLKNIK 156
Query: 434 KVDYITYLSIFDHLFDIPR 490
+VDY+TYL F+ +IP+
Sbjct: 157 RVDYMTYLLNFEKFTEIPK 175
Score = 73.3 bits (172), Expect = 2e-13
Identities = 31/66 (46%), Positives = 45/66 (68%)
Frame = +3
Query: 57 LQHRETINADHRLKNLHDRYIEASIRLKELYEDKDGLRKEEISALSGPHEFQEFYSRLKQ 236
L H+ +N++ R+K DRY S L + Y+D+DG + E+ ++SGP+EF EFYSRLK
Sbjct: 31 LTHKAKVNSEQRVKTFVDRYYSVSAELAKFYKDEDGSKSMEMDSVSGPNEFAEFYSRLKV 90
Query: 237 IKEFHR 254
IK+ HR
Sbjct: 91 IKDAHR 96
Score = 33.9 bits (74), Expect = 0.12
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +1
Query: 511 RNYIRALLTYMKDFVSRVKPLLDQAQEMALGHQEFLKQWESGTFPGW 651
+ YI +L Y+ F+ R +PL D + +Q + +++G PGW
Sbjct: 185 KEYINSLKDYLVSFMQRTRPLHDLDSVFSEVNQTVERAFKAGNLPGW 231
>AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein.
Length = 4250
Score = 32.7 bits (71), Expect = 0.27
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 598 LGHQEFLKQWESGT-FPGWPKETGGALTNVGAHLDLSAF 711
+GH F++Q +SG+ F G ++ GA G HLDL F
Sbjct: 390 IGHGSFIQQQQSGSQFGGTAYQSKGAQAPAGTHLDLPNF 428
>AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin
(drosophila actin-binding)homolog protein 1, isoform b
protein.
Length = 4203
Score = 32.7 bits (71), Expect = 0.27
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 598 LGHQEFLKQWESGT-FPGWPKETGGALTNVGAHLDLSAF 711
+GH F++Q +SG+ F G ++ GA G HLDL F
Sbjct: 331 IGHGSFIQQQQSGSQFGGTAYQSKGAQAPAGTHLDLPNF 369
>AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin
(drosophila actin-binding)homolog protein 1, isoform a
protein.
Length = 4488
Score = 32.7 bits (71), Expect = 0.27
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 598 LGHQEFLKQWESGT-FPGWPKETGGALTNVGAHLDLSAF 711
+GH F++Q +SG+ F G ++ GA G HLDL F
Sbjct: 628 IGHGSFIQQQQSGSQFGGTAYQSKGAQAPAGTHLDLPNF 666
>AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin
(drosophila actin-binding)homolog protein 1, isoform d
protein.
Length = 4369
Score = 32.7 bits (71), Expect = 0.27
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 598 LGHQEFLKQWESGT-FPGWPKETGGALTNVGAHLDLSAF 711
+GH F++Q +SG+ F G ++ GA G HLDL F
Sbjct: 628 IGHGSFIQQQQSGSQFGGTAYQSKGAQAPAGTHLDLPNF 666
>AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin
(drosophila actin-binding)homolog protein 1, isoform c
protein.
Length = 4447
Score = 32.7 bits (71), Expect = 0.27
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 598 LGHQEFLKQWESGT-FPGWPKETGGALTNVGAHLDLSAF 711
+GH F++Q +SG+ F G ++ GA G HLDL F
Sbjct: 628 IGHGSFIQQQQSGSQFGGTAYQSKGAQAPAGTHLDLPNF 666
>AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein.
Length = 4219
Score = 32.7 bits (71), Expect = 0.27
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 598 LGHQEFLKQWESGT-FPGWPKETGGALTNVGAHLDLSAF 711
+GH F++Q +SG+ F G ++ GA G HLDL F
Sbjct: 331 IGHGSFIQQQQSGSQFGGTAYQSKGAQAPAGTHLDLPNF 369
>AC006713-4|AAK68404.1| 321|Caenorhabditis elegans Hypothetical
protein Y119D3A.1 protein.
Length = 321
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +3
Query: 81 ADHRLKNLHDRYIEASIRL-KELYEDKDGLRKEEISALSGPHEFQEFYSR 227
A + L+ +E S +L LYED + EE++ SG EF++FY +
Sbjct: 109 AKNNATELYFSSLEKSNKLGASLYEDSENAGAEEMNISSGTIEFKDFYHK 158
>Z50872-4|CAA90757.2| 498|Caenorhabditis elegans Hypothetical
protein C05D12.1 protein.
Length = 498
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = -3
Query: 355 ELDRNCVILSRIFPLICQLFKFYRHGYRYF 266
+L R+ +ILS + +IC LF FY+ G+ ++
Sbjct: 284 QLHRDMMILSVVIQVICVLFIFYQAGWVWY 313
>Z69646-7|CAA93471.3| 1484|Caenorhabditis elegans Hypothetical protein
F57C7.4 protein.
Length = 1484
Score = 29.1 bits (62), Expect = 3.3
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = -1
Query: 321 FSL*FANSSNSTDMGTDISFGCFYETL*FA*VSNRTPGTHVDLTMLIFLLFV 166
FS FA+S +S + G+ S C Y L A +SN+ G + L +FL ++
Sbjct: 1065 FSSYFASSYSSWNCGSGTSSTCRYVCLGTAWISNQALGDNSYLAEALFLSYI 1116
>Z68493-4|CAA92791.1| 520|Caenorhabditis elegans Hypothetical
protein C33A12.6 protein.
Length = 520
Score = 28.7 bits (61), Expect = 4.4
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = +2
Query: 296 EELANQRENPAEDYTVPVEFTDEEGYGKYLDLHSCYEKYINLKGIEKVDYITYLSIF 466
E L NQ NP E VEF G LD + ++ YI ++ + + +S+F
Sbjct: 435 EMLTNQPTNPKETLIKYVEFAARFGKLPSLDNYGRHQSYIEYFFLDIIAILAVISLF 491
>AF003144-1|AAB54196.2| 235|Caenorhabditis elegans Hypothetical
protein C55C2.4 protein.
Length = 235
Score = 28.7 bits (61), Expect = 4.4
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 8/69 (11%)
Frame = +2
Query: 308 NQRENPA-EDYTVPVEFTDEEGYGKYLDLHSCYEKYINL-------KGIEKVDYITYLSI 463
NQ E+ EDY E GYG Y +++ C ++L K +EK+ ++ Y+S+
Sbjct: 166 NQEEDDDDEDYDDEEEDQGNGGYGFYAEIYLCVVFGLSLITILILIKELEKILFLIYMSL 225
Query: 464 FDHLFDIPR 490
+PR
Sbjct: 226 LFRKIYLPR 234
>Z98866-21|CAD56612.1| 743|Caenorhabditis elegans Hypothetical
protein Y49E10.23b protein.
Length = 743
Score = 28.3 bits (60), Expect = 5.8
Identities = 18/59 (30%), Positives = 29/59 (49%)
Frame = +3
Query: 57 LQHRETINADHRLKNLHDRYIEASIRLKELYEDKDGLRKEEISALSGPHEFQEFYSRLK 233
L+H E + ++R+K R S L E + D LRK+ I A H Q++ +L+
Sbjct: 217 LKH-ERFDFENRMKIAEKRVESLSSNLSESKQQGDMLRKQLIQAKDDKHIIQQYEVKLQ 274
>Z98866-20|CAB11567.1| 734|Caenorhabditis elegans Hypothetical
protein Y49E10.23a protein.
Length = 734
Score = 28.3 bits (60), Expect = 5.8
Identities = 18/59 (30%), Positives = 29/59 (49%)
Frame = +3
Query: 57 LQHRETINADHRLKNLHDRYIEASIRLKELYEDKDGLRKEEISALSGPHEFQEFYSRLK 233
L+H E + ++R+K R S L E + D LRK+ I A H Q++ +L+
Sbjct: 217 LKH-ERFDFENRMKIAEKRVESLSSNLSESKQQGDMLRKQLIQAKDDKHIIQQYEVKLQ 274
>Z81530-6|CAB04310.1| 329|Caenorhabditis elegans Hypothetical
protein F36D1.8 protein.
Length = 329
Score = 27.9 bits (59), Expect = 7.7
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +2
Query: 404 EKYINLKGIEKVDYITYLSIFDHLFDIPRERKNSETGITFVHCSLI*KILC 556
EK +N G+E D+I FDH F + ++K GI L+ I+C
Sbjct: 52 EKIVNFTGVE--DFIPPFVDFDHGFFVAPDKKLLGCGIPKSMSQLMSNIMC 100
>Z78065-5|CAB01515.1| 954|Caenorhabditis elegans Hypothetical
protein T09E8.2 protein.
Length = 954
Score = 27.9 bits (59), Expect = 7.7
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Frame = +3
Query: 201 HEFQEFYSRLKQIKEFHRNIQMKYLYPCL*NL--KSWQIKGKILLRITQFLSSSLMKKAM 374
H +Y R KQ + RN MKY + C K + G + +R L S+L ++
Sbjct: 88 HSQARYYDRYKQQEYTRRNDFMKYCHVCRKKTVGKLRVLPGDLRMRKVWILRSNLDEERS 147
Query: 375 ESIW 386
+W
Sbjct: 148 AELW 151
>U41107-6|AAC71165.3| 340|Caenorhabditis elegans Hypothetical
protein F55C12.6 protein.
Length = 340
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/52 (23%), Positives = 26/52 (50%)
Frame = +2
Query: 443 YITYLSIFDHLFDIPRERKNSETGITFVHCSLI*KILCPELNLFWIRLKKWL 598
YI+Y ++D IP+ + + E + V+ + +L + ++F K W+
Sbjct: 164 YISYYELYDFKVPIPKIKDDCEIVVKNVNTKTVTDVLKYDTSIFPFNRKNWI 215
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,892,717
Number of Sequences: 27780
Number of extensions: 355820
Number of successful extensions: 1004
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 955
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1003
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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