Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30848
         (717 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    24   1.7  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    24   1.7  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    23   2.9  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    23   2.9  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    23   2.9  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    23   3.8  
AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              21   8.8  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    21   8.8  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   8.8  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = +2

Query: 263 NEISVPMSVEFEELANQRENPAEDYTVPVE 352
           N IS+ + +E+E + N + N     T+P+E
Sbjct: 70  NHISLTLDLEYELVENLQANEKPWSTLPIE 99


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = +2

Query: 263 NEISVPMSVEFEELANQRENPAEDYTVPVE 352
           N IS+ + +E+E + N + N     T+P+E
Sbjct: 108 NHISLTLDLEYELVENLQANEKPWSTLPIE 137


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = +1

Query: 178 KYQHCQVHMSSRSSIRDLSKLKSFIETSK 264
           + QHC++HM  R      S L  F   SK
Sbjct: 385 RMQHCELHMQPRKKNCCRSWLSKFPTRSK 413


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = +1

Query: 178 KYQHCQVHMSSRSSIRDLSKLKSFIETSK 264
           + QHC++HM  R      S L  F   SK
Sbjct: 385 RMQHCELHMQPRKKNCCRSWLSKFPTRSK 413


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +2

Query: 323 PAEDYTVPVEFTDEEGYGKYLDLHSCYEKYINLKGIEKV 439
           P+ DY + V      G+G+Y  +   Y+K  +  G++ V
Sbjct: 487 PSTDYAIQVRAKTTRGWGEYTPV--VYKKTPHAMGLDYV 523


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = -2

Query: 413 CTFHNTNVGPNTFHSLLHQ*TRQELCN 333
           C   NT + PNTF  +    T    CN
Sbjct: 323 CWDTNTELNPNTFILVAENNTTMVFCN 349


>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 12/54 (22%), Positives = 27/54 (50%)
 Frame = +1

Query: 82  LIIV*RIYMIDILKPL*DLKNCMKIKMDYEKKKYQHCQVHMSSRSSIRDLSKLK 243
           LI++  IY  + +  + D +NC  ++ +    K ++ ++    R+   D+S  K
Sbjct: 15  LILIIFIYSNETIAQVTDDENCETLQSEVHITKDEYDEIGRLKRTCSGDISVTK 68


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 12/54 (22%), Positives = 27/54 (50%)
 Frame = +1

Query: 82  LIIV*RIYMIDILKPL*DLKNCMKIKMDYEKKKYQHCQVHMSSRSSIRDLSKLK 243
           LI++  IY  + +  + D +NC  ++ +    K ++ ++    R+   D+S  K
Sbjct: 15  LILIIFIYSNETIAQVTDDENCETLQSEVHITKDEYDEIGRLKRTCSGDISVTK 68


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 9/25 (36%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
 Frame = +2

Query: 383 LDLHSCYEKYINLKG-IEKVDYITY 454
           L LH C+ +  N+KG +  VD + +
Sbjct: 556 LSLHKCFMRVENVKGAVWTVDEVEF 580


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,293
Number of Sequences: 438
Number of extensions: 4300
Number of successful extensions: 17
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22170330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)