Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30846
(620 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0008 + 13651997-13652072,13652440-13652541,13653138-136531... 49 3e-06
08_02_0726 + 20452492-20453238,20453676-20453765,20453904-20454107 48 6e-06
06_01_0830 + 6261629-6261704,6261829-6261974,6262086-6262310,626... 42 3e-04
09_03_0079 + 12142390-12142459,12142792-12143006,12143050-121432... 42 4e-04
05_04_0139 + 18355597-18355696,18356665-18356778,18357118-183572... 42 5e-04
01_05_0009 - 17101633-17101836,17101948-17102040,17102122-171023... 38 0.006
02_05_0782 - 31716860-31717150,31717400-31717612,31718497-317186... 37 0.011
04_03_0920 + 20826876-20829293 31 0.56
09_04_0202 - 15544498-15545037,15546043-15546449,15546874-155469... 30 1.3
04_03_0923 + 20843477-20845044,20846081-20846996 30 1.7
08_02_1259 - 25676523-25676624,25676726-25676851,25677023-256771... 29 3.9
06_03_0095 - 16575938-16576585,16577028-16577219,16577294-165773... 29 3.9
10_01_0167 + 1876793-1877402,1877423-1877642,1877760-1879534,188... 28 5.2
03_05_0721 + 27134277-27134666,27135401-27135466,27137036-271371... 28 6.9
05_01_0267 + 2050854-2051682,2051864-2051921,2052518-2052608 27 9.1
>09_04_0008 +
13651997-13652072,13652440-13652541,13653138-13653142,
13653970-13654188,13654686-13654901,13654989-13655078,
13656307-13656507
Length = 302
Score = 48.8 bits (111), Expect = 3e-06
Identities = 25/85 (29%), Positives = 48/85 (56%), Gaps = 3/85 (3%)
Frame = +3
Query: 267 LKSELTGNLENVIVALMTPLPH---FYAKELHDAVSGIXTDEEAIIEILCTLSNYGIRTI 437
+KSE +GN E ++ ++ + ++AK L ++ G+ TD+ +I ++ T + ++ I
Sbjct: 208 VKSETSGNFELALLTILRCAENPAKYFAKVLRKSMKGMGTDDSTLIRVVVTRTEIDMQYI 267
Query: 438 SAFYEQLYGKSLESDLKGDTSGHLR 512
A Y + Y KSL + +TSG+ R
Sbjct: 268 KAEYYKKYKKSLAEAIHSETSGNYR 292
Score = 35.5 bits (78), Expect = 0.034
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +3
Query: 339 AKELHDA-VSGIXTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGH 506
AK+L+ A + TDE+ I I S + ++++ Y +Y +SLE +K +TSG+
Sbjct: 159 AKDLYKAGEKRLGTDEKTFIRIFTERSWAHMASVASAYHHMYDRSLEKVVKSETSGN 215
Score = 32.7 bits (71), Expect = 0.24
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = +3
Query: 339 AKELHDAVSGIXTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSG 503
A L +A+SG D A EI+C+ + ++ + Y +G LE D+ TSG
Sbjct: 76 ATVLREALSGDTIDLRAATEIICSRTPSQLQIMKQTYHAKFGTYLEHDIGQRTSG 130
Score = 29.1 bits (62), Expect = 3.0
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +2
Query: 134 LRKAMKGFGTDEKAIIDVLCRR 199
LRK+MKG GTD+ +I V+ R
Sbjct: 238 LRKSMKGMGTDDSTLIRVVVTR 259
>08_02_0726 + 20452492-20453238,20453676-20453765,20453904-20454107
Length = 346
Score = 48.0 bits (109), Expect = 6e-06
Identities = 27/86 (31%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Frame = +3
Query: 267 LKSELTGN----LENVIVALMTPLPHFYAKELHDAVSGIXTDEEAIIEILCTLSNYGIRT 434
+KSE +GN L ++ +P +F AK LH+A+ G+ T++ +I ++ T + ++
Sbjct: 251 VKSETSGNFGFGLLTILRCAESPAKYF-AKVLHEAMKGLGTNDTTLIRVVTTRAEVDMQY 309
Query: 435 ISAFYEQLYGKSLESDLKGDTSGHLR 512
I A Y + Y +SL + +TSG+ R
Sbjct: 310 IKAEYHRSYKRSLADAVHSETSGNYR 335
Score = 32.7 bits (71), Expect = 0.24
Identities = 20/84 (23%), Positives = 39/84 (46%)
Frame = +3
Query: 249 QGLISELKSELTGNLENVIVALMTPLPHFYAKELHDAVSGIXTDEEAIIEILCTLSNYGI 428
Q L+ L +EL+G+ + ++ + A LH A++G TD A E++C+ + +
Sbjct: 59 QDLLHRLAAELSGHHKRAVLLWVLDPASRDAAVLHQALNGDVTDMRAATEVVCSRTPSQL 118
Query: 429 RTISAFYEQLYGKSLESDLKGDTS 500
+ Y +G L+ D +
Sbjct: 119 LVVRQAYLARFGGGGGGGLEHDVA 142
>06_01_0830 +
6261629-6261704,6261829-6261974,6262086-6262310,
6262910-6263122,6264007-6264300
Length = 317
Score = 42.3 bits (95), Expect = 3e-04
Identities = 23/83 (27%), Positives = 42/83 (50%)
Frame = +3
Query: 255 LISELKSELTGNLENVIVALMTPLPHFYAKELHDAVSGIXTDEEAIIEILCTLSNYGIRT 434
L ++ K E L +I P ++ K + A++G+ TDE ++ I+ T + ++
Sbjct: 222 LKADPKDEFLSTLRAIIRCFCCP-DRYFEKVIRLAIAGMGTDENSLTRIITTRAEVDLKL 280
Query: 435 ISAFYEQLYGKSLESDLKGDTSG 503
I+ Y++ LE + GDTSG
Sbjct: 281 ITEAYQKRNSVPLERAVAGDTSG 303
Score = 33.9 bits (74), Expect = 0.10
Identities = 20/59 (33%), Positives = 26/59 (44%)
Frame = +3
Query: 318 TPLPHFYAKELHDAVSGIXTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGD 494
T L H AK LH+ + ++ II IL T S + Y YG + DLK D
Sbjct: 167 TKLAHSEAKILHEKIQHKAYGDDEIIRILTTRSKAQLIATFNRYNDEYGHPINKDLKAD 225
Score = 31.9 bits (69), Expect = 0.42
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +2
Query: 134 LRKAMKGFGTDEKAIIDVLCRRGIVQASRSRR 229
LRKA +G+GT+E II +L R Q RR
Sbjct: 20 LRKAFQGWGTNEALIISILAHRDAAQRRAIRR 51
>09_03_0079 +
12142390-12142459,12142792-12143006,12143050-12143268,
12143345-12143932
Length = 363
Score = 41.9 bits (94), Expect = 4e-04
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Frame = +3
Query: 255 LISELKSELTGNLENVIVALMTPLPHFYAKEL-HDAVSGIXTDEEAIIEILCTLSNYGIR 431
L+S+ S L+G++ + L P ++ DA+ G D + ++E++CT + +
Sbjct: 81 LVSKHISILSGSIAIRVACLRASEPCVRDADIARDALFGRRIDGDVLVEVVCTRPSGEVA 140
Query: 432 TISAFYEQLYGKSLESDLKGDTSGHLRD 515
I Y+ Y SLE D+ TSG L +
Sbjct: 141 LIRQAYQARYSASLERDVSSRTSGSLNE 168
>05_04_0139 +
18355597-18355696,18356665-18356778,18357118-18357263,
18357365-18357910,18358397-18358600
Length = 369
Score = 41.5 bits (93), Expect = 5e-04
Identities = 20/77 (25%), Positives = 42/77 (54%)
Frame = +3
Query: 276 ELTGNLENVIVALMTPLPHFYAKELHDAVSGIXTDEEAIIEILCTLSNYGIRTISAFYEQ 455
+L L+ + L +P HF A+ + ++ G+ TDEE + + + + + + Y+
Sbjct: 281 QLAAVLKAALWCLTSPEKHF-AEVIRTSILGLGTDEEMLTRGIVSRAEVDMEKVKEEYKV 339
Query: 456 LYGKSLESDLKGDTSGH 506
Y ++ +D++GDTSG+
Sbjct: 340 RYNTTVTADVRGDTSGY 356
Score = 38.3 bits (85), Expect = 0.005
Identities = 25/74 (33%), Positives = 36/74 (48%)
Frame = +3
Query: 291 LENVIVALMTPLPHFYAKELHDAVSGIXTDEEAIIEILCTLSNYGIRTISAFYEQLYGKS 470
+ ++ V P P A+ + AV G TDE A+IEIL + I+ YE LY ++
Sbjct: 47 MASISVPNPAPSPTEDAESIRKAVQGWGTDENALIEILGHRTAAQRAEIAVAYEGLYDET 106
Query: 471 LESDLKGDTSGHLR 512
L L + SG R
Sbjct: 107 LLDRLHSELSGDFR 120
Score = 32.7 bits (71), Expect = 0.24
Identities = 13/27 (48%), Positives = 21/27 (77%)
Frame = +2
Query: 131 TLRKAMKGFGTDEKAIIDVLCRRGIVQ 211
++RKA++G+GTDE A+I++L R Q
Sbjct: 65 SIRKAVQGWGTDENALIEILGHRTAAQ 91
>01_05_0009 -
17101633-17101836,17101948-17102040,17102122-17102334,
17102514-17102651,17102764-17102909,17106264-17106339
Length = 289
Score = 37.9 bits (84), Expect = 0.006
Identities = 23/73 (31%), Positives = 36/73 (49%)
Frame = +3
Query: 291 LENVIVALMTPLPHFYAKELHDAVSGIXTDEEAIIEILCTLSNYGIRTISAFYEQLYGKS 470
+ ++V +TP P A L A G TDE+A+I +L + I YE+ Y ++
Sbjct: 1 MATIVVPPVTPSPAEDADALLKAFQGWGTDEQAVIGVLAHRDATQRKQIRLTYEENYNEN 60
Query: 471 LESDLKGDTSGHL 509
L L+ + SG L
Sbjct: 61 LIQRLQSELSGDL 73
Score = 32.7 bits (71), Expect = 0.24
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +2
Query: 134 LRKAMKGFGTDEKAIIDVLCRRGIVQASRSR 226
L KA +G+GTDE+A+I VL R Q + R
Sbjct: 20 LLKAFQGWGTDEQAVIGVLAHRDATQRKQIR 50
Score = 31.9 bits (69), Expect = 0.42
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = +3
Query: 249 QGLISELKSELTGNLENVIVALMTPLPHFYAKELHDAVSGIXTDEEAIIEILCTLSN 419
+ LI L+SEL+G+LE + + A ++ A I D I+EI CT S+
Sbjct: 59 ENLIQRLQSELSGDLERAMYHWVLDPVERQAVMVNTATKCIHEDYAVIVEIACTNSS 115
>02_05_0782 -
31716860-31717150,31717400-31717612,31718497-31718642,
31718742-31718817
Length = 241
Score = 37.1 bits (82), Expect = 0.011
Identities = 22/87 (25%), Positives = 40/87 (45%)
Frame = +3
Query: 255 LISELKSELTGNLENVIVALMTPLPHFYAKELHDAVSGIXTDEEAIIEILCTLSNYGIRT 434
L ++ K E G L +I P ++ K + A+ G+ TDE ++ I+ T + ++
Sbjct: 147 LKADPKDEFLGTLRAIIRCFTCP-DRYFEKVIRLALGGMGTDENSLTRIITTRAEVDLKL 205
Query: 435 ISAFYEQLYGKSLESDLKGDTSGHLRD 515
I Y++ LE + DT+ D
Sbjct: 206 IKEAYQKRNSVPLERAVAKDTTRDYED 232
Score = 35.9 bits (79), Expect = 0.026
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = +2
Query: 134 LRKAMKGFGTDEKAIIDVLCRRGIVQASRSRR 229
LRKA KG+GT+EK II +L R Q RR
Sbjct: 20 LRKAFKGWGTNEKLIISILAHRDAAQRRAIRR 51
>04_03_0920 + 20826876-20829293
Length = 805
Score = 31.5 bits (68), Expect = 0.56
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +3
Query: 324 LPHFYAKELHDAVSGIXTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSG 503
LPH A+ + A SG + + CT +YG S ++++LY SD D +G
Sbjct: 366 LPH-NAENVQAATSGDECSQVCLSNCSCTAYSYGKDGCSIWHDELYNVKQLSDASSDRNG 424
>09_04_0202 -
15544498-15545037,15546043-15546449,15546874-15546977,
15547580-15547788,15548092-15549428,15551680-15551941
Length = 952
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/65 (26%), Positives = 26/65 (40%), Gaps = 2/65 (3%)
Frame = +3
Query: 285 GNLENV-IVALMTPLPHFYAKELHDAVSGIXTDEEAIIEILCTLSNYGIRTISAFYEQL- 458
GN V +++ P Y+ L V D + I C + YG R + YE
Sbjct: 116 GNRSQVPVISFTATSPSLYSASLPYFVRATLNDSAQVQSIACLIKTYGWREVVPIYEDTD 175
Query: 459 YGKSL 473
YG+ +
Sbjct: 176 YGRGI 180
>04_03_0923 + 20843477-20845044,20846081-20846996
Length = 827
Score = 29.9 bits (64), Expect = 1.7
Identities = 19/80 (23%), Positives = 34/80 (42%)
Frame = +3
Query: 270 KSELTGNLENVIVALMTPLPHFYAKELHDAVSGIXTDEEAIIEILCTLSNYGIRTISAFY 449
+++ TG + LPH A+ + A S + + CT +YG S ++
Sbjct: 348 RTDRTGLTDKFYPVQSIRLPHS-AENVKVATSADECSQACLSNCSCTAYSYGKSGCSVWH 406
Query: 450 EQLYGKSLESDLKGDTSGHL 509
++LY SD D +G +
Sbjct: 407 DELYNVKQLSDSSSDGNGEV 426
>08_02_1259 -
25676523-25676624,25676726-25676851,25677023-25677134,
25677294-25677385,25677751-25677828,25677910-25677989,
25678079-25678181,25678274-25678336,25678988-25679194
Length = 320
Score = 28.7 bits (61), Expect = 3.9
Identities = 17/31 (54%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = -3
Query: 558 PWFS-SRLAMHNDTHNLLSVPTCRLLSPIPG 469
P FS S LA+H T NLLS P C L+ +PG
Sbjct: 126 PIFSLSPLAIH--TRNLLSDPRCTLVVQVPG 154
>06_03_0095 -
16575938-16576585,16577028-16577219,16577294-16577392,
16577496-16577618,16577717-16577929,16578143-16578251,
16578339-16578427,16578604-16578880,16578974-16579084,
16579160-16580508,16581218-16581631
Length = 1207
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +3
Query: 462 GKSLESDLKGDTSGHLRDCACRCAWPIAMKTRASMKAQLKPMLKH 596
GKSL L+ D D A +CA I ++ KA + ++KH
Sbjct: 817 GKSLTYALEDDVKFKFLDLALKCASVICCRSSPKQKALVTRLVKH 861
>10_01_0167 +
1876793-1877402,1877423-1877642,1877760-1879534,
1880019-1880199,1881313-1881529
Length = 1000
Score = 28.3 bits (60), Expect = 5.2
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 348 LHDAVSGIXTDEEAIIEILCTLSNYGIRTISAFY 449
L D +S T EE ++ LC LS+Y ++++ Y
Sbjct: 703 LSDKLSKCKTKEEMLLASLCKLSSYKLQSLHIIY 736
>03_05_0721 +
27134277-27134666,27135401-27135466,27137036-27137191,
27137286-27137453,27137544-27137711
Length = 315
Score = 27.9 bits (59), Expect = 6.9
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 9/64 (14%)
Frame = -2
Query: 184 VDDSLLIGAEALHSLAKGLGIR-GRVER-----LRGVHRGGALVRV---VLLSAHVEILL 32
VDDSL A+A+H L + LG + GR ++ + +H A+ R+ + L H+ I+
Sbjct: 140 VDDSLAQCAKAVHVLCRALGGKTGRSKKGWDIGVNCIHPTAAMARLFSPIKLPVHMPIIE 199
Query: 31 FNSD 20
F+ D
Sbjct: 200 FHQD 203
>05_01_0267 + 2050854-2051682,2051864-2051921,2052518-2052608
Length = 325
Score = 27.5 bits (58), Expect = 9.1
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Frame = +3
Query: 378 DEEA--IIEILCTLSNYGI-RTISAFYEQLYGKSLESDLKGDTSGHLRDCACRCAWPIAM 548
DE A ++ + L++ I R +A E+ + E+ + + L D ACR A P A+
Sbjct: 131 DERAARVLLVAARLAHESISRAAAAAREEADRAAREAAVARKHARELLDAACRAAEPEAL 190
Query: 549 KTRASMKAQLKPMLKHWPP 605
+ + +A + P PP
Sbjct: 191 EAKKKAEAPVAPAAAPPPP 209
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,106,202
Number of Sequences: 37544
Number of extensions: 310565
Number of successful extensions: 871
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 842
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 871
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1502076244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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