Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30846
(620 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_37033| Best HMM Match : Annexin (HMM E-Value=0) 75 4e-14
SB_26806| Best HMM Match : Annexin (HMM E-Value=0) 62 5e-10
SB_35578| Best HMM Match : Annexin (HMM E-Value=1e-19) 61 8e-10
SB_6006| Best HMM Match : Annexin (HMM E-Value=2.4e-25) 46 3e-05
SB_47771| Best HMM Match : Annexin (HMM E-Value=0) 42 3e-04
SB_7681| Best HMM Match : Annexin (HMM E-Value=0) 40 0.002
SB_15593| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.061
SB_49976| Best HMM Match : SEC-C (HMM E-Value=0.95) 29 4.0
SB_49312| Best HMM Match : Mucin (HMM E-Value=0.19) 29 4.0
SB_54673| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_18393| Best HMM Match : RCSD (HMM E-Value=2.6) 28 7.0
>SB_37033| Best HMM Match : Annexin (HMM E-Value=0)
Length = 287
Score = 75.4 bits (177), Expect = 4e-14
Identities = 37/86 (43%), Positives = 52/86 (60%)
Frame = +3
Query: 255 LISELKSELTGNLENVIVALMTPLPHFYAKELHDAVSGIXTDEEAIIEILCTLSNYGIRT 434
LI +LKSE+ G E+ ++ALMTP + A L A+ G+ TDE +IE+L T +N I
Sbjct: 134 LIKDLKSEVGGYFEDTVIALMTPPAEYDATLLRKAIKGLGTDEAVLIEVLTTRTNDEIIA 193
Query: 435 ISAFYEQLYGKSLESDLKGDTSGHLR 512
I Y L+ + LE D+ GDTSG +
Sbjct: 194 IRNAYNTLFSRDLEKDIAGDTSGKFK 219
Score = 37.9 bits (84), Expect = 0.007
Identities = 18/68 (26%), Positives = 34/68 (50%)
Frame = +3
Query: 378 DEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHLRDCACRCAWPIAMKTR 557
D +A++ +LC+ +N + IS Y+ ++G+ L DLK + G+ D P A
Sbjct: 103 DNKALMYLLCSRTNSQRQRISLEYKTMFGRDLIKDLKSEVGGYFEDTVIALMTPPAEYDA 162
Query: 558 ASMKAQLK 581
++ +K
Sbjct: 163 TLLRKAIK 170
Score = 32.3 bits (70), Expect = 0.33
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +2
Query: 134 LRKAMKGFGTDEKAIIDVLCRR 199
LRKA+KG GTDE +I+VL R
Sbjct: 165 LRKAIKGLGTDEAVLIEVLTTR 186
>SB_26806| Best HMM Match : Annexin (HMM E-Value=0)
Length = 829
Score = 61.7 bits (143), Expect = 5e-10
Identities = 29/83 (34%), Positives = 48/83 (57%)
Frame = +3
Query: 255 LISELKSELTGNLENVIVALMTPLPHFYAKELHDAVSGIXTDEEAIIEILCTLSNYGIRT 434
L+ +L ++ ++ + +L+ P + L+ A+ G+ T E +IEILCT SN I+
Sbjct: 490 LVEQLDGKVAIDVHEAVTSLLLPATKADVRSLYYAMKGLGTKEAQLIEILCTRSNAEIQE 549
Query: 435 ISAFYEQLYGKSLESDLKGDTSG 503
I Y + YG+SL D+K +TSG
Sbjct: 550 IKQEYNKKYGRSLTDDMKSETSG 572
Score = 33.1 bits (72), Expect = 0.19
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = +3
Query: 342 KELHDAVSGIXTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHLRD 515
++LH+AV+ + + I +I Y++ YG SLE D+K +TSG D
Sbjct: 60 EDLHEAVAAMLLPGNEADARTLYFAMKNIDSIKEEYQKKYGCSLEDDVKEETSGDFED 117
Score = 29.1 bits (62), Expect = 3.0
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +2
Query: 131 TLRKAMKGFGTDEKAIIDVLCRR 199
+L AMKG GT E +I++LC R
Sbjct: 520 SLYYAMKGLGTKEAQLIEILCTR 542
>SB_35578| Best HMM Match : Annexin (HMM E-Value=1e-19)
Length = 146
Score = 60.9 bits (141), Expect = 8e-10
Identities = 30/59 (50%), Positives = 41/59 (69%)
Frame = +3
Query: 255 LISELKSELTGNLENVIVALMTPLPHFYAKELHDAVSGIXTDEEAIIEILCTLSNYGIR 431
L+++LKSEL+GNLE ++A+M P + AK L + G TDEE +I+ILCT SN G R
Sbjct: 34 LMNDLKSELSGNLEECLLAMMEPSVLYDAKCLRRGMRGAGTDEETLIDILCTRSNQGNR 92
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = +3
Query: 375 TDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHLRDC 518
T+E +I IL SN I Y+ +YGK L +DLK + SG+L +C
Sbjct: 2 TNEAELIGILANRSNAQRVEIRKRYKTMYGKDLMNDLKSELSGNLEEC 49
Score = 35.1 bits (77), Expect = 0.046
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +2
Query: 134 LRKAMKGFGTDEKAIIDVLCRR 199
LR+ M+G GTDE+ +ID+LC R
Sbjct: 65 LRRGMRGAGTDEETLIDILCTR 86
>SB_6006| Best HMM Match : Annexin (HMM E-Value=2.4e-25)
Length = 803
Score = 45.6 bits (103), Expect = 3e-05
Identities = 20/57 (35%), Positives = 35/57 (61%)
Frame = +3
Query: 249 QGLISELKSELTGNLENVIVALMTPLPHFYAKELHDAVSGIXTDEEAIIEILCTLSN 419
Q ++ L+ L ++++ + + + F AK LHDA+ G+ TDE+ +IEI+CT N
Sbjct: 396 QDILEALQPHLGDDVKDPVESFFSSSSAFDAKCLHDAIKGLGTDEDLLIEIICTRKN 452
Score = 44.0 bits (99), Expect = 1e-04
Identities = 25/59 (42%), Positives = 32/59 (54%)
Frame = +3
Query: 255 LISELKSELTGNLENVIVALMTPLPHFYAKELHDAVSGIXTDEEAIIEILCTLSNYGIR 431
L ELKS L + + +L AK L++A G TDE+A+I ILCT SN G R
Sbjct: 53 LNEELKSVLDEEIMKALESLAEEAAMKDAKTLYEATKGFGTDEDALISILCTRSNKGQR 111
Score = 35.9 bits (79), Expect = 0.027
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +2
Query: 131 TLRKAMKGFGTDEKAIIDVLCRR 199
TL +A KGFGTDE A+I +LC R
Sbjct: 83 TLYEATKGFGTDEDALISILCTR 105
Score = 30.3 bits (65), Expect = 1.3
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +2
Query: 134 LRKAMKGFGTDEKAIIDVLCRR 199
L A+KG GTDE +I+++C R
Sbjct: 429 LHDAIKGLGTDEDLLIEIICTR 450
>SB_47771| Best HMM Match : Annexin (HMM E-Value=0)
Length = 529
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/59 (37%), Positives = 35/59 (59%)
Frame = +3
Query: 339 AKELHDAVSGIXTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHLRD 515
A++L A+ G +DEEAIIE+L + + I+ ++Q Y K L ++LK + SG D
Sbjct: 308 AEKLKKAMKGFGSDEEAIIEVLQSCNLEQRLAIAQSFKQQYDKDLVNELKSELSGKFED 366
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +3
Query: 255 LISELKSELTGNLENVIVALMTPLPHFYAKELHDAVSGIXTDEEAII 395
L++ELKSEL+G E+ IVAL+ P A LH A+ + I+
Sbjct: 352 LVNELKSELSGKFEDAIVALLLPPEQLDANALHGAMQAKRVSADEIV 398
Score = 35.5 bits (78), Expect = 0.035
Identities = 15/19 (78%), Positives = 19/19 (100%)
Frame = +2
Query: 134 LRKAMKGFGTDEKAIIDVL 190
L+KAMKGFG+DE+AII+VL
Sbjct: 311 LKKAMKGFGSDEEAIIEVL 329
Score = 27.9 bits (59), Expect = 7.0
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +2
Query: 131 TLRKAMKGFGTDEKAIIDVLCRR 199
+L AMKG GT E +I+ LC R
Sbjct: 123 SLYYAMKGLGTKEAQLIETLCTR 145
>SB_7681| Best HMM Match : Annexin (HMM E-Value=0)
Length = 426
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/83 (25%), Positives = 44/83 (53%)
Frame = +3
Query: 255 LISELKSELTGNLENVIVALMTPLPHFYAKELHDAVSGIXTDEEAIIEILCTLSNYGIRT 434
+++ + E++G+L+ + P +F A L ++ G TD+ +I ++ + S +
Sbjct: 63 IMNSIDREMSGDLKAGLQCARNPAEYF-ADRLWKSMKGAGTDDSLLIRVVVSRSEVDLVE 121
Query: 435 ISAFYEQLYGKSLESDLKGDTSG 503
I A + Q Y K++ ++GD SG
Sbjct: 122 IKASFLQKYHKTVYKMIEGDCSG 144
>SB_15593| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1593
Score = 34.7 bits (76), Expect = 0.061
Identities = 22/72 (30%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Frame = +3
Query: 303 IVALMTPLPHFYAK-ELHDAVSGIXTDEEA---IIEILCTLSNYGIRTISAFYEQLYGKS 470
+V + +F K E+HDA+ G T+ ++ +++ L ++YG + S + +L G S
Sbjct: 537 VVTVFNMTSNFTTKSEVHDAIDGAVTENDSYRKVLDFLKEWASYGNKEYSEAWIRLDGIS 596
Query: 471 LESDLKGDTSGH 506
+E+ LKG +S H
Sbjct: 597 VEA-LKGKSSWH 607
>SB_49976| Best HMM Match : SEC-C (HMM E-Value=0.95)
Length = 1037
Score = 28.7 bits (61), Expect = 4.0
Identities = 26/114 (22%), Positives = 48/114 (42%), Gaps = 5/114 (4%)
Frame = +3
Query: 255 LISELKSELTGNLENVIVALMTPLPHFYAKELHDAVSGIXTDEEAIIEILC---TLSNYG 425
L+ +K+E TGN E + + +PHF++ + + S + E + +S G
Sbjct: 692 LLQFIKAERTGNWELHLASTAAMIPHFFSMDRPNYSSWKSKNPRVFEEFMAGNHAVSRSG 751
Query: 426 IRTISAFYEQLYGKSLESD--LKGDTSGHLRDCACRCAWPIAMKTRASMKAQLK 581
+ + +S+ +D KG G ++ A W + RAS+ LK
Sbjct: 752 QPFSQVWTDMALEQSVNADSKSKGGIVGISQNPAALQRWFLTSHERASVTTALK 805
>SB_49312| Best HMM Match : Mucin (HMM E-Value=0.19)
Length = 925
Score = 28.7 bits (61), Expect = 4.0
Identities = 18/70 (25%), Positives = 27/70 (38%)
Frame = +1
Query: 262 ANSRVNSPATWKMSSSH**LPCPTSTLRSSTMLSQEXEPTKKPSSRSCARFPTMVSVPYP 441
A N P T S +P T+ + ++ +PTK S + PT+ +P
Sbjct: 206 AKGTYNFPLTKSTKSQPATIPVSTTKFPTEAQTTEYLQPTKTSLSSTAPPHPTVYRLPST 265
Query: 442 HFTNNCTARA 471
NN T A
Sbjct: 266 ESINNFTDTA 275
>SB_54673| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 337
Score = 28.3 bits (60), Expect = 5.3
Identities = 12/43 (27%), Positives = 26/43 (60%)
Frame = +1
Query: 181 RRALPPRHRASLEIAETFKTNYGKD*LANSRVNSPATWKMSSS 309
R+A+ R++ ++ + + K+NY ++ +AN + N WK +S
Sbjct: 243 RKAMASRNKVNIALRQA-KSNYYRNKIANQKNNPKEAWKTINS 284
>SB_18393| Best HMM Match : RCSD (HMM E-Value=2.6)
Length = 249
Score = 27.9 bits (59), Expect = 7.0
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -1
Query: 611 HHRRPVLQHRL*LSLHRCPGFHRDWP 534
HH+ P LQH+ L H+ P H P
Sbjct: 69 HHKTPYLQHKTPLRQHKTPLRHHKTP 94
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,230,991
Number of Sequences: 59808
Number of extensions: 338511
Number of successful extensions: 952
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 856
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 950
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1536271375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -