Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30844
(731 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 47 3e-06
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 43 5e-05
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 41 2e-04
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 41 2e-04
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 37 0.003
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 34 0.024
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 34 0.024
SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyc... 33 0.042
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 32 0.097
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 32 0.097
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 31 0.13
SPAC17A5.11 |rec12|spo11|endonuclease Rec12|Schizosaccharomyces ... 29 0.68
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 28 1.2
SPAC1002.14 |itt1||ubiquitin-protein ligase E3 |Schizosaccharomy... 27 3.6
SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces... 27 3.6
SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomy... 26 4.8
SPBC1734.06 |rhp18||Rad18 homolog Rhp18|Schizosaccharomyces pomb... 26 6.4
SPAC1F8.02c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 8.4
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 46.8 bits (106), Expect = 3e-06
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Frame = +3
Query: 522 CPF--CNQLIKRTALTQHIKYGHNNIKP-RCNICLKTFANPNNLKRHMMIHSDIREFECD 692
C F CN+ R + H N +P +C+IC K+FA ++ +RH +H+ I+ F C
Sbjct: 572 CTFAGCNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAFACV 631
Query: 693 ICFKKF 710
C ++F
Sbjct: 632 TCNQRF 637
Score = 39.9 bits (89), Expect = 4e-04
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +3
Query: 612 CLKTFANPNNLKRHMMIHSDIREFECDICFKKFRQK 719
C K F NLK HM H++ R F+C IC K F ++
Sbjct: 577 CNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQ 612
Score = 25.4 bits (53), Expect = 8.4
Identities = 13/59 (22%), Positives = 23/59 (38%), Gaps = 3/59 (5%)
Frame = +1
Query: 334 QEDGSFLCD---CGEQFQDLTEYEKHQYKHNPAGENLCNLCGKGFESPEILTGHMLLHS 501
+ G+++C C ++F + H H C++C K F H LH+
Sbjct: 565 KSQGNYVCTFAGCNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHT 623
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 42.7 bits (96), Expect = 5e-05
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +3
Query: 531 CNQLIKRTALTQHIKYGHNNIKP-RCNICLKTFANPNNLKRHMMIHSDIREFECDICFKK 707
CN+ I R + H + +P RC++C F ++LKRH+ IH + R + C+ C K+
Sbjct: 450 CNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVCE-CLKR 508
Query: 708 FRQ 716
F +
Sbjct: 509 FNR 511
Score = 29.9 bits (64), Expect = 0.39
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +3
Query: 606 NICLKTFANPNNLKRHMMIHSDIREFECDIC 698
N C K A N++ H+ H R + CD+C
Sbjct: 448 NGCNKRIARKYNVESHIQTHLSDRPYRCDLC 478
Score = 27.9 bits (59), Expect = 1.6
Identities = 15/58 (25%), Positives = 23/58 (39%), Gaps = 3/58 (5%)
Frame = +1
Query: 334 QEDGSFLC---DCGEQFQDLTEYEKHQYKHNPAGENLCNLCGKGFESPEILTGHMLLH 498
+ DG ++C C ++ E H H C+LC GF L H+ +H
Sbjct: 438 EADGKYVCLYNGCNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIH 495
Score = 25.8 bits (54), Expect = 6.4
Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = +3
Query: 522 CPFCNQ-LIKRTALTQHIKYGHNNIKPRCNICLKTFANPNNLKRH 653
C C ++ L +H++ H N +P CLK F + L RH
Sbjct: 475 CDLCKAGFVRHHDLKRHLRI-HENGRPYVCECLKRFNRLDALNRH 518
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 40.7 bits (91), Expect = 2e-04
Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +3
Query: 522 CPFCNQLIKRTA-LTQHIKYGHNNIKPRCNICLKTFANPNNLKRHMMIH 665
CP C++ KR+ L +HI+ H + KP IC K F+ +NL++H +H
Sbjct: 425 CPECSKKFKRSEHLRRHIRSLHTSEKPFVCICGKRFSRRDNLRQHERLH 473
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 40.7 bits (91), Expect = 2e-04
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +3
Query: 588 NIKPRCNICLKTFANPNNLKRHMMIHSDIREFECDI--CFKKFRQKITMQ 731
N++ RC CL+ F+ P++LK H H+ R F CD C K F + M+
Sbjct: 465 NVRYRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMR 514
Score = 26.6 bits (56), Expect = 3.6
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
Frame = +3
Query: 510 VLINCPFCNQLIKRTALTQHIKYGHNNIKPR-CNI--CLKTFANPNNLKRHMMIH 665
V C C Q R + + Y H +P C+ C K F +N++RH IH
Sbjct: 466 VRYRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 36.7 bits (81), Expect = 0.003
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Frame = +3
Query: 519 NCPFCNQLIKRTA-LTQHIKYGHNNIKPR----CNI--CLKTFANPNNLKRHM-MIHSDI 674
+C C + K A L H+ ++ R C + C K+F + LK+H+ +IH
Sbjct: 205 SCSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHISVIHEGN 264
Query: 675 REFECDICFKKFRQKITMQ 731
F CD C KF K +Q
Sbjct: 265 MAFHCDSCGTKFGYKHMLQ 283
Score = 35.5 bits (78), Expect = 0.008
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 7/73 (9%)
Frame = +3
Query: 513 LINCPF--CNQLIKRTALTQHIKYGHNNIKPR-CNI--CLKTFANPNNLKRHMMIHSDIR 677
+ +CP+ C + R +L + H+N +P C+ C K F ++LK H H++++
Sbjct: 22 IFHCPYEECGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIHKRCHTNVK 81
Query: 678 EFEC--DICFKKF 710
F C D C +F
Sbjct: 82 PFSCHYDGCDAQF 94
Score = 33.1 bits (72), Expect = 0.042
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +3
Query: 612 CLKTFANPNNLKRHMMIHSDIREFECDI--CFKKFRQK 719
C K ++ P+ L++H+ HS+ R F CD C K F +K
Sbjct: 30 CGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRK 67
Score = 29.9 bits (64), Expect = 0.39
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +3
Query: 546 KRTALTQHIKYGHNNIKPRCNICLKTFANPNNLKRHMMIHSDIRE 680
K + L HI+ H P C+IC + F +L+ H+++H E
Sbjct: 190 KWSQLQNHIREAH---VPSCSICGRQFKTAAHLRHHVVLHQTTLE 231
Score = 29.1 bits (62), Expect = 0.68
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +1
Query: 355 CDCGEQFQDLTEYEKH-QYKHNPAGENLCNLCGKGFESPEILTGHMLLHSVT 507
C E F+ ++ + H + H P+ C++CG+ F++ L H++LH T
Sbjct: 182 CVGHEGFEKWSQLQNHIREAHVPS----CSICGRQFKTAAHLRHHVVLHQTT 229
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 33.9 bits (74), Expect = 0.024
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +3
Query: 612 CLKTFANPNNLKRHMMIHSDIREFECDICFKKF 710
C K+F +L+RH H +++ F C C + F
Sbjct: 33 CPKSFTRKEHLRRHERTHENVKAFSCSFCNRAF 65
Score = 30.3 bits (65), Expect = 0.30
Identities = 15/70 (21%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
Frame = +1
Query: 340 DGSFLC---DCGEQFQDLTEYEKHQYKHNPAGENLCNLCGKGFESPEILTGHMLLHSVTE 510
D F C DC + F +H+ H C+ C + F ++L H+ + +
Sbjct: 23 DPRFYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRHVQQMHLQK 82
Query: 511 CSLTVHSVIN 540
+L+ ++N
Sbjct: 83 QNLSERRMLN 92
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 33.9 bits (74), Expect = 0.024
Identities = 19/62 (30%), Positives = 25/62 (40%)
Frame = +3
Query: 534 NQLIKRTALTQHIKYGHNNIKPRCNICLKTFANPNNLKRHMMIHSDIREFECDICFKKFR 713
N L + LT+ + P C+ C K F NL RH HS C C K +
Sbjct: 11 NVLSAKRKLTEPSLIDSKRVFP-CDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCK 69
Query: 714 QK 719
+K
Sbjct: 70 RK 71
>SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1238
Score = 33.1 bits (72), Expect = 0.042
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = +3
Query: 486 HAPSQCD*VLINCPFCNQLIKRTALTQHIKYGHNNIKPRCNI--CLKTFANPNNLKRHMM 659
H P C V C+ ++ H++ NNI+ C + C K F+N ++ +H+
Sbjct: 1025 HHPKSCSVVKCLWASCDMVLPSEEFEMHLRGHLNNIRLNCEVSNCKKCFSNYEDMFKHLQ 1084
Query: 660 IHSDI 674
HS +
Sbjct: 1085 -HSHL 1088
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 31.9 bits (69), Expect = 0.097
Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +3
Query: 576 YGHNNIKPRCNI--CLKTFANPNNLKRHMMIHSDIREFECDICFKKF 710
Y +I+ +C+ C K+F + +RH H++ + F C C F
Sbjct: 10 YQEGDIRYKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSF 56
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 31.9 bits (69), Expect = 0.097
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Frame = +3
Query: 522 CPFCNQLIKRTA-LTQHIKYGHNNIKPR-CNI--CLKTFANPNNLKRHMMIHSD 671
CP C + R T+HI+ H KP C C K F+ + L RH IH++
Sbjct: 28 CPLCTKAFYRLEHQTRHIRT-HTGEKPHVCTFPGCAKRFSRSDELTRHARIHTN 80
Score = 25.4 bits (53), Expect = 8.4
Identities = 11/39 (28%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Frame = +3
Query: 600 RCNICLKTFANPNNLKRHMMIHSDIREFECDI--CFKKF 710
+C +C K F + RH+ H+ + C C K+F
Sbjct: 27 KCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRF 65
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 31.5 bits (68), Expect = 0.13
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +3
Query: 603 CNICLKTFANPNNLKRHMMIHSDIREFEC 689
C C + FA +LKRH+ H++ + F C
Sbjct: 72 CETCTRAFARLEHLKRHIRSHTNEKPFTC 100
>SPAC17A5.11 |rec12|spo11|endonuclease Rec12|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 345
Score = 29.1 bits (62), Expect = 0.68
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -1
Query: 431 FSPAGLCLY*CFSYSVKSWNCSPQS 357
+ P GLC+Y CF Y +++ P S
Sbjct: 230 WDPHGLCIYSCFKYGSNAYSHEPHS 254
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 28.3 bits (60), Expect = 1.2
Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Frame = +3
Query: 603 CNICLKTFANPNNLKRHMMIHSDIREFECDI--CFKKFRQK 719
C C + F + RH+ H+ + FEC C K+F ++
Sbjct: 6 CPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRR 46
>SPAC1002.14 |itt1||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 435
Score = 26.6 bits (56), Expect = 3.6
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = +3
Query: 645 KRHMMIHSDIREFECDICFKKF 710
K ++ IR+F+C++CF +F
Sbjct: 160 KNAKLLEFQIRKFQCNVCFDEF 181
>SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 442
Score = 26.6 bits (56), Expect = 3.6
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +3
Query: 594 KP-RCNICLKTFANPNNLKRHMMIHSDIR 677
KP RC +C K + N N LK H HS ++
Sbjct: 397 KPYRCEVCSKRYKNLNGLKYH-RTHSHLQ 424
>SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 922
Score = 26.2 bits (55), Expect = 4.8
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +2
Query: 47 THINEELITGDMMKDPKNIIKILTSTGSDGTILLKSDNGVQYLAETQLVNDEE 205
T ++ ++ +GDM D K+ L S G D + L D +Q+ ET + + E
Sbjct: 166 TVVDTDIDSGDMDVDSKSSDSFLLSVGKDSFMKL-WDLSIQHCVETHVDHQGE 217
>SPBC1734.06 |rhp18||Rad18 homolog Rhp18|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 387
Score = 25.8 bits (54), Expect = 6.4
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +3
Query: 513 LINCPFCNQLIKRTALTQHI 572
L++CP C+ L+ + QH+
Sbjct: 156 LVHCPACSNLVPHNQINQHL 175
>SPAC1F8.02c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 226
Score = 25.4 bits (53), Expect = 8.4
Identities = 15/66 (22%), Positives = 27/66 (40%)
Frame = +1
Query: 265 LKYDGSELVIEYADDSQIATVLQQEDGSFLCDCGEQFQDLTEYEKHQYKHNPAGENLCNL 444
L Y + Y + + ++T + + +GSF CD + Y N A + + +
Sbjct: 42 LTYPNEISELNYVEGNYLSTRIVRFNGSFYCDT-TILSETNNVTGSCYVANCANDTVLEI 100
Query: 445 CGKGFE 462
C G E
Sbjct: 101 CDSGKE 106
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,877,135
Number of Sequences: 5004
Number of extensions: 60338
Number of successful extensions: 197
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 197
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 345237368
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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