Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30844
(731 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0884 - 23986393-23987486,23988213-23988314,23988561-239886... 36 0.044
03_04_0134 - 17593449-17594702 36 0.044
05_01_0042 - 290077-290676,291093-291233,291675-291764,292364-29... 35 0.058
02_01_0113 - 854108-854302,854399-854542,854658-854893,855036-85... 35 0.077
05_07_0067 + 27463703-27463705,27464309-27464365,27464779-274648... 34 0.10
03_06_0478 + 34214412-34214846 34 0.10
03_05_0339 + 23287620-23287676,23287784-23287849,23287937-232880... 34 0.10
02_05_0202 + 26708049-26709074 34 0.10
04_04_0734 + 27648661-27649596 33 0.31
03_06_0063 - 31391870-31392679 31 0.71
07_03_1165 - 24459156-24460139 31 0.94
05_03_0314 + 12203589-12204675,12207915-12208861 31 0.94
03_01_0360 + 2815067-2816033,2816120-2816198,2816275-2816342,281... 31 0.94
02_05_0270 + 27335318-27335543,27336878-27337277,27337336-27337357 31 1.2
02_04_0007 - 18858587-18859529,18860434-18860830,18861674-18861812 31 1.2
01_01_0667 + 5099026-5099188,5099262-5099661,5099748-5100648 31 1.2
04_04_0823 + 28383798-28383864,28384475-28384877,28387388-283879... 30 1.6
03_06_0477 + 34210844-34211356 30 1.6
01_05_0421 + 21990034-21990392,21991691-21992681 30 1.6
10_08_0022 - 14225725-14226472,14227997-14228420,14228516-14228573 30 2.2
09_02_0226 - 6007656-6008063,6012166-6012678 30 2.2
03_02_0520 + 9092020-9092079,9092253-9093047 30 2.2
12_02_1180 + 26727171-26727239,26728782-26729642 29 2.9
12_02_0916 - 24271151-24271894 29 2.9
05_05_0200 - 23171803-23171906,23172304-23173951 29 2.9
04_04_0733 + 27639581-27641257 29 2.9
03_05_0255 + 22435027-22435072,22436022-22437085 29 2.9
02_04_0194 + 20820985-20821027,20822168-20822367,20822477-208225... 29 2.9
01_06_1614 - 38648495-38649706 29 2.9
09_06_0235 - 21763470-21764511,21767865-21768261,21768625-217686... 29 3.8
07_03_1151 + 24385272-24386543 29 3.8
05_03_0281 + 11560402-11560569,11561373-11561579,11562966-115631... 29 3.8
01_07_0090 - 41003888-41004716,41005142-41005559,41007010-41007193 29 3.8
12_01_1024 - 10467644-10469274,10469424-10469482,10469820-104703... 29 5.0
07_03_1104 + 24001594-24002139 29 5.0
03_04_0187 - 18236041-18236643 29 5.0
11_08_0066 - 28131521-28132012 28 6.6
09_04_0564 + 18565583-18566449,18569662-18570123 28 6.6
08_02_1172 + 24898290-24899141,24900864-24901328 28 6.6
08_02_0259 - 14974526-14974572,14974670-14974742,14974829-149748... 28 6.6
03_02_0027 + 5100865-5100878,5102241-5102708,5102795-5103021,510... 28 6.6
02_04_0316 - 21978330-21979397 28 6.6
02_01_0719 - 5364430-5364440,5364635-5365055,5365857-5366393 28 6.6
01_06_1412 - 37140654-37141088,37141549-37142214 28 6.6
01_01_0990 + 7847066-7847478,7847713-7848679 28 6.6
11_08_0067 - 28135216-28135728 28 8.8
08_01_0114 - 900530-901191,901269-901338,901536-901640,901721-90... 28 8.8
06_03_0743 + 24069752-24070483,24071890-24072345 28 8.8
03_05_0796 + 27787401-27788831 28 8.8
>12_02_0884 -
23986393-23987486,23988213-23988314,23988561-23988642,
23989231-23989368
Length = 471
Score = 35.5 bits (78), Expect = 0.044
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +1
Query: 436 CNLCGKGFESPEILTGHMLLHSVTECS 516
CN CGK F S + L GHM H V +C+
Sbjct: 385 CNTCGKSFGSGQALGGHMRRHYVRKCN 411
Score = 29.5 bits (63), Expect = 2.9
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +3
Query: 600 RCNICLKTFANPNNLKRHMMIH 665
+C +C K F+ +L+ HMM+H
Sbjct: 179 QCQMCSKVFSTSGSLREHMMMH 200
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +1
Query: 427 ENLCNLCGKGFESPEILTGHMLLH 498
++ CN C K F S L GHM H
Sbjct: 117 KHCCNKCDKSFRSGNALGGHMSCH 140
>03_04_0134 - 17593449-17594702
Length = 417
Score = 35.5 bits (78), Expect = 0.044
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +1
Query: 421 AGENLCNLCGKGFESPEILTGHMLLHSVTECSLTVHSV 534
A + C +CGKGF L GHM HS+TE +V
Sbjct: 14 ATRHSCKVCGKGFACGRSLGGHMRSHSLTEVDAVAAAV 51
>05_01_0042 -
290077-290676,291093-291233,291675-291764,292364-292563,
292685-292743,292827-292942
Length = 401
Score = 35.1 bits (77), Expect = 0.058
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Frame = +1
Query: 349 FLC---DCGEQFQDLTEYEKHQYKHNPAGENLCNL--CGKGFESPEILTGHMLLHS 501
FLC +CG+ F D+ KH + HN + +C CGK F L H L+H+
Sbjct: 87 FLCSYENCGKTFVDVAALRKHAHVHNER-QYICQEPGCGKKFVDSSKLKRHHLIHT 141
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Frame = +3
Query: 510 VLINCPF--CNQLIKRTALTQHIKYGHNNIKPRCNI--CLKTFANPNNLKRHMMIHSDIR 677
+L C + C + A + + HN + C C K F + + LKRH +IH+ +
Sbjct: 85 ILFLCSYENCGKTFVDVAALRKHAHVHNERQYICQEPGCGKKFVDSSKLKRHHLIHTGQK 144
Query: 678 EFEC 689
+F C
Sbjct: 145 DFIC 148
>02_01_0113 -
854108-854302,854399-854542,854658-854893,855036-855315,
856891-857031,857259-857372
Length = 369
Score = 34.7 bits (76), Expect = 0.077
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +3
Query: 603 CNICLKTFANPNNLKRHMMIHSDIREFECDI 695
C C +F P +LK+HM HSD R F C +
Sbjct: 62 CQECGASFQKPAHLKQHMQSHSDERSFICPL 92
>05_07_0067 +
27463703-27463705,27464309-27464365,27464779-27464844,
27464985-27465096,27465281-27465409,27466076-27466191,
27466364-27466440,27466678-27467163,27467255-27467570,
27467618-27467797
Length = 513
Score = 34.3 bits (75), Expect = 0.10
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 12/61 (19%)
Frame = +2
Query: 92 PKNIIKILTSTG--------SDGTILLKS---DN-GVQYLAETQLVNDEEDGDGTSQEVI 235
PK + KIL STG +DG +LKS DN + L + V D+E GDGT+ V+
Sbjct: 39 PKGMDKILQSTGRGRSVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVV 98
Query: 236 L 238
L
Sbjct: 99 L 99
>03_06_0478 + 34214412-34214846
Length = 144
Score = 34.3 bits (75), Expect = 0.10
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +1
Query: 394 EKHQYKHNPAGENLCNLCGKGFESPEILTGHMLLH 498
+K Q K A + C++CG+GFE + L GHM H
Sbjct: 88 KKVQEKPAAAATHECHICGQGFEMGQALGGHMRRH 122
>03_05_0339 +
23287620-23287676,23287784-23287849,23287937-23288048,
23288240-23288368,23288795-23288866,23289245-23289360,
23289494-23289570,23289788-23290273,23290373-23290688,
23290769-23290915
Length = 525
Score = 34.3 bits (75), Expect = 0.10
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 12/61 (19%)
Frame = +2
Query: 92 PKNIIKILTSTG--------SDGTILLKS---DN-GVQYLAETQLVNDEEDGDGTSQEVI 235
PK + KIL STG +DG +LKS DN + L + V D+E GDGT+ V+
Sbjct: 38 PKGMDKILQSTGRGRSVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVV 97
Query: 236 L 238
L
Sbjct: 98 L 98
>02_05_0202 + 26708049-26709074
Length = 341
Score = 34.3 bits (75), Expect = 0.10
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +1
Query: 427 ENLCNLCGKGFESPEILTGHMLLHSV 504
+N C LC + F SP L GHM HSV
Sbjct: 3 KNACKLCYRRFASPRALAGHMRSHSV 28
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 594 KPRCNICLKTFANPNNLKRHMMIHS 668
K C +C + FA+P L HM HS
Sbjct: 3 KNACKLCYRRFASPRALAGHMRSHS 27
>04_04_0734 + 27648661-27649596
Length = 311
Score = 32.7 bits (71), Expect = 0.31
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +1
Query: 427 ENLCNLCGKGFESPEILTGHMLLHSV 504
+N C LC + F +P L GHM HSV
Sbjct: 3 KNTCKLCYRRFGNPRALAGHMRSHSV 28
Score = 29.1 bits (62), Expect = 3.8
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +3
Query: 594 KPRCNICLKTFANPNNLKRHMMIHS 668
K C +C + F NP L HM HS
Sbjct: 3 KNTCKLCYRRFGNPRALAGHMRSHS 27
>03_06_0063 - 31391870-31392679
Length = 269
Score = 31.5 bits (68), Expect = 0.71
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +1
Query: 418 PAG-ENLCNLCGKGFESPEILTGHMLLHSV 504
PAG E C++CGK F S + L GH H V
Sbjct: 92 PAGAEFKCSVCGKSFSSYQALGGHKTSHRV 121
>07_03_1165 - 24459156-24460139
Length = 327
Score = 31.1 bits (67), Expect = 0.94
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 418 PAGENLCNLCGKGFESPEILTGHMLLHSVTECSLTV 525
P G++ CN+CGK + + L GH H + LT+
Sbjct: 214 PKGKHPCNVCGKEYPTGVALGGHKRKHYRKDLDLTL 249
>05_03_0314 + 12203589-12204675,12207915-12208861
Length = 677
Score = 31.1 bits (67), Expect = 0.94
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +1
Query: 436 CNLCGKGFESPEILTGHMLLHSVTECSLTVHSVIN*SKG 552
C+ CG+ F S + L GHM +H L + V+ G
Sbjct: 426 CSFCGREFRSAQALGGHMNVHRRDRARLKLSGVVEDGTG 464
>03_01_0360 +
2815067-2816033,2816120-2816198,2816275-2816342,
2817382-2817464,2821566-2823083
Length = 904
Score = 31.1 bits (67), Expect = 0.94
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 612 CLKTFANPNNLKRHMMIHSDIREFEC 689
C K F++ LKRH +H D R F+C
Sbjct: 824 CGKRFSSHKYLKRHQCVHRDERPFKC 849
>02_05_0270 + 27335318-27335543,27336878-27337277,27337336-27337357
Length = 215
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +3
Query: 552 TALTQHIKYGHNNIKPRCNICLKTFANPNNLKRHMMIHSDIREFECDICFKKFRQKIT 725
T + +H H K +C+ C K +A ++ K H I RE+ CD C F + I+
Sbjct: 157 TGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKI-CGTREYRCD-CGTLFSRLIS 212
>02_04_0007 - 18858587-18859529,18860434-18860830,18861674-18861812
Length = 492
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +3
Query: 552 TALTQHIKYGHNNIKPRCNICLKTFANPNNLKRHMMIHSDIREFECDICFKKFRQK 719
T + +H H K +C+ C K +A ++ K H I +E+ CD C F +K
Sbjct: 127 TGIKKHYSRKHGEKKWKCDRCSKKYAVQSDWKAHTKI-CGTKEYRCD-CGTIFSRK 180
>01_01_0667 + 5099026-5099188,5099262-5099661,5099748-5100648
Length = 487
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +3
Query: 552 TALTQHIKYGHNNIKPRCNICLKTFANPNNLKRHMMIHSDIREFECD 692
T + +H H K +C+ C K +A ++ K H + RE+ CD
Sbjct: 136 TGIKKHFSRKHGEKKWKCDKCSKRYAVHSDWKAHSKV-CGTREYRCD 181
>04_04_0823 +
28383798-28383864,28384475-28384877,28387388-28387932,
28387978-28388594
Length = 543
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +3
Query: 552 TALTQHIKYGHNNIKPRCNICLKTFANPNNLKRHMMIHSDIREFECD 692
T + +H H K +C+ C K +A ++ K H I RE+ CD
Sbjct: 105 TGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKI-CGTREYRCD 150
>03_06_0477 + 34210844-34211356
Length = 170
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 436 CNLCGKGFESPEILTGHMLLH 498
C++CG GFE + L GHM H
Sbjct: 111 CHICGLGFEMGQALGGHMRRH 131
>01_05_0421 + 21990034-21990392,21991691-21992681
Length = 449
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +3
Query: 552 TALTQHIKYGHNNIKPRCNICLKTFANPNNLKRHMMIHSDIREFECD 692
T + +H H K +C+ C K +A ++ K H I RE++CD
Sbjct: 68 TGIKKHFFRKHGEKKWKCDKCSKKYAVHSDWKAHSKI-CGTREYKCD 113
>10_08_0022 - 14225725-14226472,14227997-14228420,14228516-14228573
Length = 409
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +3
Query: 552 TALTQHIKYGHNNIKPRCNICLKTFANPNNLKRHMMIHSDIREFECDICFKKFRQK 719
T + +H H + RC C K +A ++ K H+ + RE+ CD C F +K
Sbjct: 109 TGIKKHFSRKHGEKRWRCERCGKRYAVHSDWKAHVK-NCGTREYRCD-CGILFSRK 162
>09_02_0226 - 6007656-6008063,6012166-6012678
Length = 306
Score = 29.9 bits (64), Expect = 2.2
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3
Query: 603 CNICLKTFANPNNLKRHMMIH 665
C +C KTF+ NNL+ HM H
Sbjct: 157 CPVCCKTFSRYNNLQMHMWGH 177
>03_02_0520 + 9092020-9092079,9092253-9093047
Length = 284
Score = 29.9 bits (64), Expect = 2.2
Identities = 21/66 (31%), Positives = 27/66 (40%)
Frame = +1
Query: 295 EYADDSQIATVLQQEDGSFLCDCGEQFQDLTEYEKHQYKHNPAGENLCNLCGKGFESPEI 474
EY T D FL G DLT E+++ +P+ + CGK F I
Sbjct: 72 EYERSMAACTKALDGDNEFLVSIGSFEGDLTFEEEYRVVGDPSEQTSICSCGK-FNRIGI 130
Query: 475 LTGHML 492
L GH L
Sbjct: 131 LCGHAL 136
>12_02_1180 + 26727171-26727239,26728782-26729642
Length = 309
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +1
Query: 391 YEKHQYKHNPAG-ENLCNLCGKGFESPEILTGHMLLHSVTECSLTVHS 531
Y+ Q++ P G + LCN CG F+S +L + +S T S +HS
Sbjct: 245 YKTPQWRTGPLGPKTLCNACGVRFKSGRLLPEYRPANSPTFVS-DIHS 291
>12_02_0916 - 24271151-24271894
Length = 247
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 421 AGENLCNLCGKGFESPEILTGHMLLH 498
A E+ C++CGK F S + L GH H
Sbjct: 88 AVEHRCSVCGKAFASYQALGGHKASH 113
Score = 28.7 bits (61), Expect = 5.0
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 436 CNLCGKGFESPEILTGHMLLH 498
CN+CGK F + + L GH H
Sbjct: 157 CNVCGKAFPTGQALGGHKRCH 177
>05_05_0200 - 23171803-23171906,23172304-23173951
Length = 583
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = -2
Query: 718 FWRNFLKQMSHSNSLISLCIIM*RFKLFGFANVFKHILHRGLMLLCPYLICCVKAV 551
FW N +++ + S C+ + GF N++ HI L L P+ I + AV
Sbjct: 332 FWDNI--SLAYLSIFCSCCVFGWNMQRLGFGNMYVHIATFMLFCLAPFFIFNLAAV 385
>04_04_0733 + 27639581-27641257
Length = 558
Score = 29.5 bits (63), Expect = 2.9
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +1
Query: 427 ENLCNLCGKGFESPEILTGHMLLHSV 504
++ C +C KGF L GHM H V
Sbjct: 22 KHFCRVCNKGFTCGSALGGHMRAHGV 47
>03_05_0255 + 22435027-22435072,22436022-22437085
Length = 369
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = +1
Query: 436 CNLCGKGFESPEILTGHMLLHSV 504
C LCGK S L GHM HSV
Sbjct: 279 CRLCGKVLASGSALGGHMKSHSV 301
Score = 28.7 bits (61), Expect = 5.0
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = +1
Query: 436 CNLCGKGFESPEILTGHMLLHS 501
C LC K F S L GHM LHS
Sbjct: 26 CKLCNKSFPSYCSLGGHMNLHS 47
>02_04_0194 +
20820985-20821027,20822168-20822367,20822477-20822566,
20822820-20822825,20822866-20823009,20823089-20823580
Length = 324
Score = 29.5 bits (63), Expect = 2.9
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 612 CLKTFANPNNLKRHMMIHSDIREFEC 689
C K F + + LKRH +IH+ + F C
Sbjct: 79 CDKKFLDSSKLKRHFLIHTGEKNFVC 104
>01_06_1614 - 38648495-38649706
Length = 403
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +1
Query: 418 PAGENLCNLCGKGFESPEILTGHMLLH 498
P G + C CGK F + L GHM H
Sbjct: 288 PEGNHPCKTCGKEFSTGVALGGHMRKH 314
>09_06_0235 -
21763470-21764511,21767865-21768261,21768625-21768632,
21769489-21769565
Length = 507
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +3
Query: 552 TALTQHIKYGHNNIKPRCNICLKTFANPNNLKRHMMIHSDIREFECD 692
T + +H H K RC+ C K +A ++ K H RE+ CD
Sbjct: 109 TGIKKHYCRKHGEKKWRCDKCSKRYAVQSDWKAHSKT-CGTREYRCD 154
>07_03_1151 + 24385272-24386543
Length = 423
Score = 29.1 bits (62), Expect = 3.8
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +1
Query: 436 CNLCGKGFESPEILTGHMLLH 498
C +CGKGF L GHM H
Sbjct: 15 CRVCGKGFSCGRSLGGHMRSH 35
>05_03_0281 +
11560402-11560569,11561373-11561579,11562966-11563174,
11563261-11563309,11563611-11563673,11563799-11565472
Length = 789
Score = 29.1 bits (62), Expect = 3.8
Identities = 21/69 (30%), Positives = 26/69 (37%), Gaps = 13/69 (18%)
Frame = +3
Query: 531 CNQ-LIKRTALTQHIKYGHNNIK------------PRCNICLKTFANPNNLKRHMMIHSD 671
C Q L RT L QH+K G + + P C C +F N L HM
Sbjct: 129 CEQKLYTRTQLNQHVKTGDSEVDGSEVERSGFAGHPMCEFCRSSFYGDNELYTHM----S 184
Query: 672 IREFECDIC 698
+ C IC
Sbjct: 185 REHYSCHIC 193
>01_07_0090 - 41003888-41004716,41005142-41005559,41007010-41007193
Length = 476
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +3
Query: 552 TALTQHIKYGHNNIKPRCNICLKTFANPNNLKRHMMIHSDIREFECD 692
T + +H H K +C+ C K +A ++ K H + RE++CD
Sbjct: 149 TGIKKHFCRKHGEKKWKCDRCGKRYAVHSDWKAHSKV-CGTREYKCD 194
>12_01_1024 - 10467644-10469274,10469424-10469482,10469820-10470357,
10470975-10471666,10471912-10472062,10473797-10473864,
10473964-10474042,10474763-10474765,10476427-10477255
Length = 1349
Score = 28.7 bits (61), Expect = 5.0
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
Frame = +3
Query: 558 LTQHIKYGHNNIKP-RCNI--CLKTFANPNNLKRHMMIHSDIREFECDI--CFKKFR 713
L QH K H + +P +C C K F P HM +H+ +R +EC C + FR
Sbjct: 1270 LLQHRKV-HIDERPLKCTWKGCKKAFKWPWARTEHMRVHTGVRPYECQEPGCGQTFR 1325
>07_03_1104 + 24001594-24002139
Length = 181
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +1
Query: 436 CNLCGKGFESPEILTGHMLLH 498
C+LCGK F S + L GH H
Sbjct: 29 CSLCGKAFASYQALGGHKASH 49
>03_04_0187 - 18236041-18236643
Length = 200
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/56 (28%), Positives = 24/56 (42%)
Frame = +1
Query: 436 CNLCGKGFESPEILTGHMLLHSVTECSLTVHSVIN*SKGQP*RNILSTDTITSNHG 603
C++CGK F S + L GH H + VI+ + S+ T T+ G
Sbjct: 50 CSVCGKAFPSHQALGGHKASHRKPPTAALPMHVIDAPPPPSAEDTASSSTTTTTSG 105
>11_08_0066 - 28131521-28132012
Length = 163
Score = 28.3 bits (60), Expect = 6.6
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 436 CNLCGKGFESPEILTGHMLLH 498
C +CG GF+ + L GHM H
Sbjct: 113 CEVCGLGFQMGQALGGHMRRH 133
>09_04_0564 + 18565583-18566449,18569662-18570123
Length = 442
Score = 28.3 bits (60), Expect = 6.6
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 603 CNICLKTFANPNNLKRHMMIH 665
C +C KTF NN++ HM H
Sbjct: 275 CPVCFKTFNRYNNMQMHMWGH 295
>08_02_1172 + 24898290-24899141,24900864-24901328
Length = 438
Score = 28.3 bits (60), Expect = 6.6
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 603 CNICLKTFANPNNLKRHMMIH 665
C +C KTF NN++ HM H
Sbjct: 270 CPVCFKTFNRYNNMQMHMWGH 290
>08_02_0259 -
14974526-14974572,14974670-14974742,14974829-14974891,
14975030-14975097,14975172-14975295,14976434-14976493,
14976744-14976806,14976902-14977942,14978027-14978093,
14978188-14978303,14978454-14978540,14978749-14978838,
14979128-14979214,14979366-14979428,14979509-14979566,
14980174-14980231,14980349-14980416,14980508-14980587,
14981084-14981147,14981321-14981392,14981517-14981576,
14982344-14982398,14982487-14982520,14983845-14983931,
14984036-14984122,14984211-14984408,14984509-14984639,
14984739-14984838
Length = 1066
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 131 DGTILLKSDNGVQYLAETQLVNDEEDGDGTSQE 229
D +K D+G T+ V+DE+DG+ T +E
Sbjct: 142 DDETKIKQDSGRNVKRRTEEVDDEDDGNDTDEE 174
>03_02_0027 +
5100865-5100878,5102241-5102708,5102795-5103021,
5103670-5104577
Length = 538
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +3
Query: 552 TALTQHIKYGHNNIKPRCNICLKTFANPNNLKRHMMIHSDIREFECD 692
T + +H H K +C+ C K +A ++ K H RE+ CD
Sbjct: 109 TGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHTKTCGS-REYRCD 154
>02_04_0316 - 21978330-21979397
Length = 355
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 603 CNICLKTFANPNNLKRHMMIHSD 671
C+IC K F NL+ HM H D
Sbjct: 146 CDICGKGFRRDANLRMHMRAHGD 168
>02_01_0719 - 5364430-5364440,5364635-5365055,5365857-5366393
Length = 322
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +3
Query: 603 CNICLKTFANPNNLKRHMMIH 665
C +C KTF NNL+ HM H
Sbjct: 165 CPVCRKTFNRYNNLQMHMWGH 185
>01_06_1412 - 37140654-37141088,37141549-37142214
Length = 366
Score = 28.3 bits (60), Expect = 6.6
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 603 CNICLKTFANPNNLKRHMMIH 665
C++C KTF NN++ HM H
Sbjct: 208 CHVCNKTFNRYNNMQMHMWGH 228
>01_01_0990 + 7847066-7847478,7847713-7848679
Length = 459
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +3
Query: 552 TALTQHIKYGHNNIKPRCNICLKTFANPNNLKRHMMIHSDIREFECD 692
T + +H H K +C+ C K +A ++ K H RE+ CD
Sbjct: 86 TGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD 131
>11_08_0067 - 28135216-28135728
Length = 170
Score = 27.9 bits (59), Expect = 8.8
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +1
Query: 436 CNLCGKGFESPEILTGHMLLH 498
C++CGK F + + L GHM H
Sbjct: 101 CDMCGKVFATGQALGGHMRRH 121
>08_01_0114 - 900530-901191,901269-901338,901536-901640,901721-901831,
901912-902016,902245-902391,903273-903354,903445-903786,
903873-904177,904259-904435,904799-904852,905171-905254,
905855-905968,906048-906321,907552-907926,908003-908267,
908352-908538,908615-909052,909895-909966,910037-910630,
911471-911623,911700-911828,912326-912657,912705-912840,
913046-913491,913580-915087,915169-915431,915622-915738,
915844-916014,916743-916845,916930-916988,918360-918461,
918560-918649,918727-918877,919745-919830,919926-920102,
920915-920978,921859-922008,923132-923211,923311-923376,
924540-924747,925502-925575,925761-925848,926140-926312,
926541-926609,926698-926741,927074-927167,927290-927366,
927475-927552,927992-928085
Length = 3314
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -1
Query: 386 VKSWNCSPQSHKNDPSSCCKTV-AI*LSSAYSITSSEPSY 270
+KS C P NDP CC +V + ++ S S+P+Y
Sbjct: 2069 MKSSVCYPSHPSNDPFRCCVSVEEYSIPTSSSTQKSQPNY 2108
>06_03_0743 + 24069752-24070483,24071890-24072345
Length = 395
Score = 27.9 bits (59), Expect = 8.8
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 603 CNICLKTFANPNNLKRHMMIH 665
C +C KTF NN++ HM H
Sbjct: 230 CPVCYKTFNRYNNMQMHMWGH 250
>03_05_0796 + 27787401-27788831
Length = 476
Score = 27.9 bits (59), Expect = 8.8
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +1
Query: 433 LCNLCGKGFESPEILTGHMLLH 498
+C++CG+ F S + L GH+L H
Sbjct: 248 VCSICGRCFGSHQALGGHVLGH 269
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,280,643
Number of Sequences: 37544
Number of extensions: 350189
Number of successful extensions: 973
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 968
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1921741964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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