Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30844
(731 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein ... 46 1e-06
CR954257-11|CAJ14162.1| 415|Anopheles gambiae predicted protein... 26 1.0
AJ237706-1|CAB40347.1| 570|Anopheles gambiae putative 5'-nucleo... 25 2.4
AJ438610-4|CAD27476.1| 593|Anopheles gambiae putative transcrip... 25 3.2
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi... 24 5.6
AF395080-1|AAK97462.1| 537|Anopheles gambiae zinc finger transc... 23 9.7
>AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein
protein.
Length = 680
Score = 46.0 bits (104), Expect = 1e-06
Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Frame = +3
Query: 522 CPFCNQL-IKRTALTQHIKYGHNNIKP-RCNICLKTFANPNNLK--RHMMIHSDIREFEC 689
C C+ ++ + L +HI+ H KP +C C T+A+P+ K RHM IH+ + + C
Sbjct: 214 CTECDYASVELSKLKRHIRT-HTGEKPFQCPHC--TYASPDKFKLTRHMRIHTGEKPYSC 270
Query: 690 DICFKKFRQKITMQ 731
D+CF +F Q +++
Sbjct: 271 DVCFARFTQSNSLK 284
Score = 42.7 bits (96), Expect = 1e-05
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +3
Query: 516 INCPFCNQLIK-RTALTQHIKYGHNNIKPRCNICLKTFANPNNLKRHMMIHSDIREFECD 692
I C C+ R + H K RC C + +L+ H+++H+D + ++CD
Sbjct: 327 IKCKRCDSTFPDRYSYKMHAKTHEGEKCYRCEYCPYASISMRHLESHLLLHTDQKPYKCD 386
Query: 693 ICFKKFRQK 719
C + FRQK
Sbjct: 387 QCAQTFRQK 395
Score = 41.5 bits (93), Expect = 3e-05
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Frame = +3
Query: 522 CPFCNQLIK-RTALTQHIKYGHNNIKP-RCNICLKTFANPNNLKRHMMIH--SDIREFEC 689
CP C + LT+H++ H KP C++C F N+LK H MIH + F+C
Sbjct: 242 CPHCTYASPDKFKLTRHMRI-HTGEKPYSCDVCFARFTQSNSLKAHKMIHQVGNKPVFQC 300
Query: 690 DIC 698
+C
Sbjct: 301 KLC 303
Score = 39.1 bits (87), Expect = 1e-04
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +3
Query: 522 CPFCNQLIKRTA-LTQHIKYGHNNIKP-RCNICLKTFANPNNLKRHMMIHSDIREFECDI 695
C C+ + L +HI+Y H + +P +C C + LKRH+ H+ + F+C
Sbjct: 185 CKHCDNCFTTSGELIRHIRYRHTHERPHKCTECDYASVELSKLKRHIRTHTGEKPFQCPH 244
Query: 696 C 698
C
Sbjct: 245 C 245
Score = 31.9 bits (69), Expect = 0.021
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +3
Query: 603 CNICLKTFANPNNLKRHMMIHSDIREFECDICFKKFRQKITMQ 731
CN C T L RH+ HS+ R +C +C + F+ ++Q
Sbjct: 129 CNYCNYTSNKLFLLSRHLKTHSEDRPHKCVVCERGFKTLASLQ 171
Score = 29.9 bits (64), Expect = 0.085
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +3
Query: 522 CPFCNQLIKRTALTQHIKYGHNNIKP-RCNICLKTFANPNNLKRHM 656
CP+ + I L H+ H + KP +C+ C +TF LKRHM
Sbjct: 360 CPYAS--ISMRHLESHLLL-HTDQKPYKCDQCAQTFRQKQLLKRHM 402
Score = 27.1 bits (57), Expect = 0.60
Identities = 14/47 (29%), Positives = 17/47 (36%)
Frame = +1
Query: 361 CGEQFQDLTEYEKHQYKHNPAGENLCNLCGKGFESPEILTGHMLLHS 501
C F D Y+ H H C C S L H+LLH+
Sbjct: 332 CDSTFPDRYSYKMHAKTHEGEKCYRCEYCPYASISMRHLESHLLLHT 378
>CR954257-11|CAJ14162.1| 415|Anopheles gambiae predicted protein
protein.
Length = 415
Score = 26.2 bits (55), Expect = 1.0
Identities = 21/92 (22%), Positives = 37/92 (40%), Gaps = 4/92 (4%)
Frame = +3
Query: 468 RNFDRAHAPSQCD*VLINCPFCNQLIKRTALTQHIKYGHNNIKPRCNICLKTFANPNNLK 647
+ D A AP+ L CP C L LT + + + + + N +
Sbjct: 278 QQLDTAAAPTNHH--LYRCPACGNLF--VELTNFYNHSCTKAPAQDGVAVASSNNQSQPA 333
Query: 648 RH----MMIHSDIREFECDICFKKFRQKITMQ 731
R + I S+ + F+C++C +R K+ Q
Sbjct: 334 RTGGSAVTITSEGQRFQCNLCDMSYRTKLQYQ 365
>AJ237706-1|CAB40347.1| 570|Anopheles gambiae putative
5'-nucleotidase protein.
Length = 570
Score = 25.0 bits (52), Expect = 2.4
Identities = 11/57 (19%), Positives = 25/57 (43%)
Frame = +2
Query: 41 NLTHINEELITGDMMKDPKNIIKILTSTGSDGTILLKSDNGVQYLAETQLVNDEEDG 211
N ++ + D+ K P ++ + G++G + + Y+A + D +DG
Sbjct: 452 NTAQVSGMTVVADLSKKPYERVQSIDIVGANGAKTALKKDQIYYVAVPSYLADGKDG 508
>AJ438610-4|CAD27476.1| 593|Anopheles gambiae putative
transcription factor protein.
Length = 593
Score = 24.6 bits (51), Expect = 3.2
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +2
Query: 371 NSKT*QNMKNININITQPVRIYATCVEKVLNHQKF*QGTCSFT-V*LSAH 517
NS+T N+ +ININ+ CV++VL H+ +G+ F+ + LS H
Sbjct: 500 NSQT--NIDDININVEA-----FPCVDEVLKHELSLEGSLDFSNLPLSIH 542
>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
channel alpha subunitprotein.
Length = 2139
Score = 23.8 bits (49), Expect = 5.6
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +1
Query: 292 IEYADDSQIATVLQQEDGSFL 354
+ YADDS T + +E+G+ +
Sbjct: 602 LPYADDSNAVTPMSEENGAII 622
>AF395080-1|AAK97462.1| 537|Anopheles gambiae zinc finger
transcription factor pannier protein.
Length = 537
Score = 23.0 bits (47), Expect = 9.7
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +1
Query: 406 YKHNPAGENLCNLCGKGFE 462
++ N GE +CN CG F+
Sbjct: 188 WRRNNDGEPVCNACGLYFK 206
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 722,201
Number of Sequences: 2352
Number of extensions: 15033
Number of successful extensions: 36
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74844540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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