Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30844
(731 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein ... 42 6e-04
At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein ... 42 6e-04
At4g35700.1 68417.m05067 zinc finger (C2H2 type) family protein ... 38 0.005
At2g48100.2 68415.m06021 exonuclease family protein contains Pfa... 38 0.007
At2g48100.1 68415.m06020 exonuclease family protein contains Pfa... 38 0.007
At4g35610.1 68417.m05058 zinc finger (C2H2 type) family protein ... 36 0.037
At2g45120.1 68415.m05615 zinc finger (C2H2 type) family protein ... 35 0.048
At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein ... 35 0.064
At5g20890.1 68418.m02481 chaperonin, putative similar to SWISS-P... 34 0.085
At1g26610.1 68414.m03241 zinc finger (C2H2 type) family protein ... 33 0.15
At5g60470.1 68418.m07584 zinc finger (C2H2 type) family protein ... 33 0.26
At5g15480.1 68418.m01812 zinc finger (C2H2 type) family protein ... 32 0.45
At3g45260.1 68416.m04887 zinc finger (C2H2 type) family protein ... 31 0.79
At5g56200.1 68418.m07012 zinc finger (C2H2 type) family protein ... 31 1.0
At5g03150.1 68418.m00263 zinc finger (C2H2 type) family protein ... 30 1.4
At4g02670.1 68417.m00362 zinc finger (C2H2 type) family protein ... 30 1.4
At1g34790.1 68414.m04337 transparent testa 1 protein (TT1) / zin... 30 1.4
At4g17810.1 68417.m02657 zinc finger (C2H2 type) family protein ... 30 1.8
At4g04404.1 68417.m00636 zinc finger (C2H2 type) family protein ... 30 1.8
At2g17180.1 68415.m01984 zinc finger (C2H2 type) family protein ... 30 1.8
At5g06070.1 68418.m00673 zinc finger (C2H2 type) family protein ... 29 2.4
At4g35280.1 68417.m05013 zinc finger (C2H2 type) family protein ... 29 2.4
At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein ... 29 2.4
At3g29340.1 68416.m03684 zinc finger (C2H2 type) family protein ... 29 2.4
At3g04870.2 68416.m00529 zeta-carotene desaturase (ZDS1) / carot... 29 2.4
At3g04870.1 68416.m00528 zeta-carotene desaturase (ZDS1) / carot... 29 2.4
At2g01620.1 68415.m00088 expressed protein 29 2.4
At1g61620.1 68414.m06943 expressed protein contains Pfam profile... 29 2.4
At1g08290.1 68414.m00915 zinc finger (C2H2 type) protein (WIP3) ... 29 2.4
At5g66730.1 68418.m08412 zinc finger (C2H2 type) family protein ... 29 3.2
At5g40310.1 68418.m04890 exonuclease family protein contains exo... 29 3.2
At3g53820.1 68416.m05946 zinc finger (C2H2 type) family protein ... 29 3.2
At3g23140.1 68416.m02916 zinc finger (C2H2 type) family protein ... 29 3.2
At1g27730.1 68414.m03389 zinc finger (C2H2 type) family protein ... 29 3.2
At3g27970.1 68416.m03491 exonuclease family protein contains exo... 29 4.2
At3g18360.1 68416.m02335 VQ motif-containing protein contains PF... 29 4.2
At3g09290.1 68416.m01103 zinc finger (C2H2 type) family protein ... 29 4.2
At5g67450.1 68418.m08504 zinc finger (C2H2 type) protein 1 (AZF1... 28 5.6
At3g57670.1 68416.m06425 zinc finger (C2H2 type) protein (WIP2) ... 28 5.6
At2g26940.1 68415.m03231 zinc finger (C2H2 type) family protein ... 28 5.6
At1g06560.1 68414.m00695 NOL1/NOP2/sun family protein contains P... 28 5.6
At1g03840.1 68414.m00365 zinc finger (C2H2 type) family protein ... 28 5.6
At5g41460.1 68418.m05035 fringe-related protein strong similarit... 28 7.3
At5g22890.1 68418.m02677 zinc finger (C2H2 type) family protein ... 28 7.3
At3g60580.1 68416.m06777 zinc finger (C2H2 type) family protein ... 28 7.3
At3g20880.1 68416.m02640 zinc finger (C2H2 type) protein (WIP4) ... 28 7.3
At3g19580.1 68416.m02483 zinc finger (C2H2 type) protein 2 (AZF2... 28 7.3
At1g65130.1 68414.m07384 ubiquitin carboxyl-terminal hydrolase-r... 28 7.3
At1g51220.1 68414.m05761 zinc finger (C2H2 type) protein (WIP5) ... 28 7.3
At1g13290.1 68414.m01543 zinc finger (C2H2 type) family protein ... 28 7.3
At5g43540.1 68418.m05323 zinc finger (C2H2 type) family protein ... 27 9.7
At5g43170.1 68418.m05269 zinc finger (C2H2 type) protein 3 (AZF3... 27 9.7
At5g36260.1 68418.m04374 aspartyl protease family protein contai... 27 9.7
At5g25840.1 68418.m03066 expressed protein 27 9.7
At3g49930.1 68416.m05460 zinc finger (C2H2 type) family protein ... 27 9.7
At3g13950.1 68416.m01761 expressed protein 27 9.7
At3g13810.1 68416.m01744 zinc finger (C2H2 type) family protein ... 27 9.7
At2g28200.1 68415.m03424 zinc finger (C2H2 type) family protein ... 27 9.7
At2g24090.1 68415.m02877 ribosomal protein L35 family protein co... 27 9.7
>At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 412
Score = 41.5 bits (93), Expect = 6e-04
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
Frame = +3
Query: 516 INCPFCNQLIKRTALTQHIKYGHNNIKP---RCNI--CLKTFANPNNLKRHM-MIHSDIR 677
INC C + + +H++ + P +C + C TF+ +NL++HM +H DIR
Sbjct: 275 INCEICGSKHLKKNIKRHLRTHDEDSSPGEIKCEVEGCSSTFSKASNLQKHMKAVHDDIR 334
Query: 678 EFECDI--CFKKFRQK 719
F C C +F K
Sbjct: 335 PFVCGFPGCGMRFAYK 350
Score = 34.3 bits (75), Expect = 0.085
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = +3
Query: 603 CNICLKTFANPNNLKRHMMIHSDIREFEC--DICFKKFRQK 719
C C F P +LK+HM HS R F C D C +R+K
Sbjct: 68 CQECGAEFKKPAHLKQHMQSHSLERSFTCYVDDCAASYRRK 108
>At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 324
Score = 41.5 bits (93), Expect = 6e-04
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
Frame = +3
Query: 516 INCPFCNQLIKRTALTQHIKYGHNNIKP---RCNI--CLKTFANPNNLKRHM-MIHSDIR 677
INC C + + +H++ + P +C + C TF+ +NL++HM +H DIR
Sbjct: 187 INCEICGSKHLKKNIKRHLRTHDEDSSPGEIKCEVEGCSSTFSKASNLQKHMKAVHDDIR 246
Query: 678 EFECDI--CFKKFRQK 719
F C C +F K
Sbjct: 247 PFVCGFPGCGMRFAYK 262
>At4g35700.1 68417.m05067 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 275
Score = 38.3 bits (85), Expect = 0.005
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +1
Query: 403 QYKHNPAGENLCNLCGKGFESPEILTGHMLLH 498
Q H P G +CN+CGKGF S + + GH+ H
Sbjct: 133 QLTHLPQGPPMCNVCGKGFASWKAVFGHLRQH 164
>At2g48100.2 68415.m06021 exonuclease family protein contains Pfam
domain PF00929: exonuclease
Length = 344
Score = 37.9 bits (84), Expect = 0.007
Identities = 16/64 (25%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +3
Query: 522 CPFCNQLI-KRTALTQHIKYGHNNI-KPRCNICLKTFANPNNLKRHMMIHSDIREFECDI 695
C C ++ +R L +H+K ++++ +PRC +CLK + +++ H+ + + + C
Sbjct: 19 CVACYKMFNRREHLVEHMKISYHSLHQPRCGVCLKHCKSFESVREHLNVPDHLSKGNCKA 78
Query: 696 CFKK 707
F K
Sbjct: 79 IFTK 82
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +3
Query: 588 NIKPRCNICLKTFANPNNLKRHMMI-HSDIREFECDICFK 704
+++ RC C K F +L HM I + + + C +C K
Sbjct: 14 SVRHRCVACYKMFNRREHLVEHMKISYHSLHQPRCGVCLK 53
>At2g48100.1 68415.m06020 exonuclease family protein contains Pfam
domain PF00929: exonuclease
Length = 344
Score = 37.9 bits (84), Expect = 0.007
Identities = 16/64 (25%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +3
Query: 522 CPFCNQLI-KRTALTQHIKYGHNNI-KPRCNICLKTFANPNNLKRHMMIHSDIREFECDI 695
C C ++ +R L +H+K ++++ +PRC +CLK + +++ H+ + + + C
Sbjct: 19 CVACYKMFNRREHLVEHMKISYHSLHQPRCGVCLKHCKSFESVREHLNVPDHLSKGNCKA 78
Query: 696 CFKK 707
F K
Sbjct: 79 IFTK 82
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +3
Query: 588 NIKPRCNICLKTFANPNNLKRHMMI-HSDIREFECDICFK 704
+++ RC C K F +L HM I + + + C +C K
Sbjct: 14 SVRHRCVACYKMFNRREHLVEHMKISYHSLHQPRCGVCLK 53
>At4g35610.1 68417.m05058 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 271
Score = 35.5 bits (78), Expect = 0.037
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +1
Query: 412 HNPAGENLCNLCGKGFESPEILTGHMLLH 498
H P G +C++CG+GF S + + GHM H
Sbjct: 132 HPPKGPPVCHICGRGFGSWKAVFGHMRAH 160
>At2g45120.1 68415.m05615 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 314
Score = 35.1 bits (77), Expect = 0.048
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +1
Query: 376 QDLTEYEKHQYKHNPA-GENLCNLCGKGFESPEILTGHMLLHSVTECSLT 522
+D T+++ YK + + G C CGK F+S + L GH H + +T
Sbjct: 175 EDETDHDSEDYKSSKSRGRFKCETCGKVFKSYQALGGHRASHKKNKACMT 224
>At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein
contains Pfam PF00096: Zinc finger, C2H2 type
Length = 387
Score = 34.7 bits (76), Expect = 0.064
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Frame = +1
Query: 349 FLCD---CGEQFQDLTEYEKHQYKHNPAGENLCNL--CGKGFESPEILTGHMLLHS 501
++CD CG++F D ++ ++H H +C CGK F L HM HS
Sbjct: 108 YVCDQEGCGKKFLDSSKLKRHYLIHTGERNYICTYEGCGKAFSLDFNLRSHMKTHS 163
Score = 32.7 bits (71), Expect = 0.26
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Frame = +1
Query: 349 FLCD---CGEQFQDLTEYEKHQYKHNPAGENLCNL--CGKGFESPEILTGHMLLHS 501
FLC CG+ F D++ KH + H + +C+ CGK F L H L+H+
Sbjct: 79 FLCSYDGCGKTFFDVSALRKHSHIHGER-QYVCDQEGCGKKFLDSSKLKRHYLIHT 133
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = +3
Query: 612 CLKTFANPNNLKRHMMIHSDIREFECDI--CFKKF 710
C KTF + + L++H IH + R++ CD C KKF
Sbjct: 86 CGKTFFDVSALRKHSHIHGE-RQYVCDQEGCGKKF 119
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = +3
Query: 612 CLKTFANPNNLKRHMMIHSDIREFEC--DICFKKF 710
C K F + + LKRH +IH+ R + C + C K F
Sbjct: 115 CGKKFLDSSKLKRHYLIHTGERNYICTYEGCGKAF 149
>At5g20890.1 68418.m02481 chaperonin, putative similar to
SWISS-PROT:P78371- T-complex protein 1, beta subunit
(TCP-1-beta) [Homo sapiens]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 527
Score = 34.3 bits (75), Expect = 0.085
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 12/61 (19%)
Frame = +2
Query: 92 PKNIIKILTSTG--------SDGTILLKS---DN-GVQYLAETQLVNDEEDGDGTSQEVI 235
PK + KIL STG +DG +LKS DN + L + V D+E GDGT+ V+
Sbjct: 40 PKGMDKILQSTGRGHAVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVV 99
Query: 236 L 238
L
Sbjct: 100 L 100
>At1g26610.1 68414.m03241 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 455
Score = 33.5 bits (73), Expect = 0.15
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = +1
Query: 436 CNLCGKGFESPEILTGHMLLHSVTE 510
C CGKGF S + L GHM HS E
Sbjct: 95 CRECGKGFVSSKALCGHMACHSERE 119
>At5g60470.1 68418.m07584 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 392
Score = 32.7 bits (71), Expect = 0.26
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = +3
Query: 552 TALTQHIKYGHNNIKPRCNICLKTFANPNNLKRHMMIHSDIREFECDICFKKFRQK 719
T + +H H K +C+ C K +A ++ K H I REF CD C F +K
Sbjct: 68 TGIKKHFSRKHGEKKWKCDKCSKKYAVISDWKAHNKICGS-REFRCD-CGTLFSRK 121
>At5g15480.1 68418.m01812 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 402
Score = 31.9 bits (69), Expect = 0.45
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 427 ENLCNLCGKGFESPEILTGHMLLHSVTEC 513
E+ C LC K F S + L GH H +++C
Sbjct: 357 EHRCRLCNKIFSSYQALGGHQTFHRMSKC 385
>At3g45260.1 68416.m04887 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 446
Score = 31.1 bits (67), Expect = 0.79
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +3
Query: 552 TALTQHIKYGHNNIKPRCNICLKTFANPNNLKRHMMIHSDIREFECDICFKKFRQK 719
T + +H H K +C+ C K +A ++ K H I +E+ CD C F +K
Sbjct: 130 TGIKKHFSRKHGEKKWKCDKCSKKYAVMSDWKAHSKI-CGTKEYRCD-CGTLFSRK 183
>At5g56200.1 68418.m07012 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 493
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 412 HNPAGENLCNLCGKGFESPEILTGHMLLH 498
HN G+++CN+C K F + + L GH H
Sbjct: 407 HN--GDHVCNICHKSFSTGQALGGHKRCH 433
>At5g03150.1 68418.m00263 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 503
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +3
Query: 552 TALTQHIKYGHNNIKPRCNICLKTFANPNNLKRHMMIHSDIREFECDICFKKFRQK 719
T + +H H K +C C K +A ++ K H RE++CD C F +K
Sbjct: 144 TGIKKHYSRKHGEKKWKCEKCSKKYAVQSDWKAHAKT-CGTREYKCD-CGTLFSRK 197
>At4g02670.1 68417.m00362 zinc finger (C2H2 type) family protein
similar to potato PCP1 zinc finger protein, GenBank
accession number X82328 contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 402
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = +3
Query: 552 TALTQHIKYGHNNIKPRCNICLKTFANPNNLKRHMMIHSDIREFECDICFKKFRQKIT 725
T + +H H K +C C K +A ++ K H I R++ CD C F +K T
Sbjct: 144 TGIKKHFCRKHGEKKWKCEKCSKFYAVQSDWKAHTKI-CGTRDYRCD-CGTLFSRKDT 199
>At1g34790.1 68414.m04337 transparent testa 1 protein (TT1) / zinc
finger (C2H2 type) protein TT1 identical to transparent
testa 1 GI:18253279 from [Arabidopsis thaliana];
contains Pfam profile PF00096: Zinc finger, C2H2 type
Length = 303
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3
Query: 603 CNICLKTFANPNNLKRHMMIH 665
C++C KTF NNL+ HM H
Sbjct: 147 CHVCFKTFNRYNNLQMHMWGH 167
>At4g17810.1 68417.m02657 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 180
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = +1
Query: 418 PAGENLCNLCGKGFESPEILTGHMLLHSVTECSLTVH 528
P CN C + F S + L GHM +H S H
Sbjct: 36 PPRSYTCNFCRREFRSAQALGGHMNVHRRDRASSRAH 72
>At4g04404.1 68417.m00636 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 230
Score = 29.9 bits (64), Expect = 1.8
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +1
Query: 436 CNLCGKGFESPEILTGHMLLH 498
C +CGK FE + L GH LH
Sbjct: 93 CQICGKSFECYQALGGHRRLH 113
>At2g17180.1 68415.m01984 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 270
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +1
Query: 376 QDLTEYEKHQYKHNPAGEN-LCNLCGKGFESPEILTGHMLLH 498
Q++ + +K + +G N CN+C + F S + L GHM H
Sbjct: 192 QEIVDQDKGKSVKLVSGMNHRCNICSRVFSSGQALGGHMRCH 233
>At5g06070.1 68418.m00673 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 226
Score = 29.5 bits (63), Expect = 2.4
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +1
Query: 436 CNLCGKGFESPEILTGHMLLH 498
C+ CG+ F+S + L GHM +H
Sbjct: 57 CSFCGREFKSAQALGGHMNVH 77
>At4g35280.1 68417.m05013 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 284
Score = 29.5 bits (63), Expect = 2.4
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 421 AGENLCNLCGKGFESPEILTGHMLLH 498
+G + CN+C + F S + L GHM H
Sbjct: 219 SGHHKCNICFRVFSSGQALGGHMRCH 244
>At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 452
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +3
Query: 552 TALTQHIKYGHNNIKPRCNICLKTFANPNNLKRHMMIHSDIREFECD 692
T + +H H K +C+ C K +A ++ K H I +E++CD
Sbjct: 124 TGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKI-CGTKEYKCD 169
>At3g29340.1 68416.m03684 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 650
Score = 29.5 bits (63), Expect = 2.4
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 436 CNLCGKGFESPEILTGHMLLH 498
C +CGK FE + L GH +H
Sbjct: 45 CKICGKSFECYQALGGHQRIH 65
Score = 24.6 bits (51), Expect(2) = 6.2
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +1
Query: 436 CNLCGKGFESPEILTGHMLLHSVTECSL 519
C +CGK F L GH LH T+ L
Sbjct: 100 CKVCGKIFGCYRGLGGHTKLHRSTKREL 127
Score = 21.8 bits (44), Expect(2) = 6.2
Identities = 12/35 (34%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Frame = +1
Query: 334 QEDGSFLCD-CGEQFQDLTEYEKHQYKHNPAGENL 435
Q S C CG+ F+ HQ H P E L
Sbjct: 38 QSKSSHKCKICGKSFECYQALGGHQRIHRPIKEKL 72
>At3g04870.2 68416.m00529 zeta-carotene desaturase (ZDS1) / carotene
7,8-desaturase identical to SP|Q38893 Zeta-carotene
desaturase, chloroplast precursor (EC 1.14.99.30)
(Carotene 7,8-desaturase) {Arabidopsis thaliana}
Length = 558
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +1
Query: 277 GSELVIEYADDSQIATVLQQEDGSFLCDCGEQFQDLTE 390
GS +Y D + AT+ ++ S++CD GE+ +L +
Sbjct: 505 GSYTKQDYIDSMEGATLSGRQASSYICDAGEELAELNK 542
>At3g04870.1 68416.m00528 zeta-carotene desaturase (ZDS1) / carotene
7,8-desaturase identical to SP|Q38893 Zeta-carotene
desaturase, chloroplast precursor (EC 1.14.99.30)
(Carotene 7,8-desaturase) {Arabidopsis thaliana}
Length = 558
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +1
Query: 277 GSELVIEYADDSQIATVLQQEDGSFLCDCGEQFQDLTE 390
GS +Y D + AT+ ++ S++CD GE+ +L +
Sbjct: 505 GSYTKQDYIDSMEGATLSGRQASSYICDAGEELAELNK 542
>At2g01620.1 68415.m00088 expressed protein
Length = 292
Score = 29.5 bits (63), Expect = 2.4
Identities = 11/40 (27%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
Frame = +3
Query: 591 IKPRCNICLKTFANPNNLKRHMMIHSDIR---EFECDICF 701
+ P+C C K + ++ +RH + +D FEC+ C+
Sbjct: 239 VLPKCRFCNKPYCTNHSSRRHEIAITDAASRPSFECEACY 278
>At1g61620.1 68414.m06943 expressed protein contains Pfam profile:
PF01363 FYVE zinc finger
Length = 310
Score = 29.5 bits (63), Expect = 2.4
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = +3
Query: 561 TQHIKYGHNNIKP--RCNICLKTFANPNNL-KRHMMIHSDIREFECDICFKKFRQK 719
TQ + G ++IKP C++CLK F +P K H+ I EC + KK Q+
Sbjct: 27 TQRERLGRDSIKPFDACSLCLKPFIDPMCCHKGHVFCRECI--LECFLAQKKDIQR 80
>At1g08290.1 68414.m00915 zinc finger (C2H2 type) protein (WIP3)
identical to WIP3 protein [Arabidopsis thaliana]
gi|18027014|gb|AAL55723; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 337
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/27 (48%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = +3
Query: 603 CNICLKTFANPNNLKRHMMIH-SDIRE 680
C+IC KTF NN++ HM H S+ R+
Sbjct: 182 CSICSKTFNRYNNMQMHMWGHGSEFRK 208
>At5g66730.1 68418.m08412 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 500
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +3
Query: 552 TALTQHIKYGHNNIKPRCNICLKTFANPNNLKRHMMIHSDIREFECD 692
T + +H H K +C C K +A ++ K H I +E++CD
Sbjct: 122 TGIKKHFCRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTKEYKCD 167
>At5g40310.1 68418.m04890 exonuclease family protein contains
exonuclease domain, Pfam:PF00929
Length = 348
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/48 (27%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = +3
Query: 522 CPFC-NQLIKRTALTQHIKYGHNNI-KPRCNICLKTFANPNNLKRHMM 659
C C Q K+ L +H++ ++++ +P C IC K + ++L+ H++
Sbjct: 8 CGGCYRQFNKKEHLVEHMRISYHSVHEPTCGICNKHCRSFDSLREHLI 55
>At3g53820.1 68416.m05946 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 142
Score = 29.1 bits (62), Expect = 3.2
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = +1
Query: 400 HQYKHNPAGENLCNLCGKGFESPEILTGHMLLH 498
+ + + A +C C +GF + + L GHM +H
Sbjct: 11 YSWSGSQARPYICEFCERGFSNAQALGGHMNIH 43
>At3g23140.1 68416.m02916 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 172
Score = 29.1 bits (62), Expect = 3.2
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +1
Query: 436 CNLCGKGFESPEILTGHMLLH 498
C++C +GF +P+ L GH +H
Sbjct: 23 CDICKRGFTNPQALGGHNNIH 43
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = +3
Query: 579 GHNNIKPRCNICLKTFANPNNLKRHMMIHSDIRE 680
G N C+IC + F NP L H IH RE
Sbjct: 15 GENRRTYDCDICKRGFTNPQALGGHNNIHRRERE 48
>At1g27730.1 68414.m03389 zinc finger (C2H2 type) family protein
(ZAT10) / salt-tolerance zinc finger protein (STZ)
identical to salt-tolerance zinc finger protein
GB:CAA64820 GI:1565227 from [Arabidopsis thaliana];
contains Pfam domain, PF00096: Zinc finger, C2H2 type;
identical to cDNA zinc finger protein STZ/ZAT10
(STZ/ZAT10) GI:9965730
Length = 227
Score = 29.1 bits (62), Expect = 3.2
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = +1
Query: 430 NLCNLCGKGFESPEILTGHMLLHSVTECSLTVHSVIN*SKGQP*RNILSTDTITSNH 600
++C +C K F S + L GH H ++ SV N S+G ST ++S+H
Sbjct: 136 HVCTICNKSFPSGQALGGHKRCHYEGNNNINTSSVSN-SEGAG-----STSHVSSSH 186
>At3g27970.1 68416.m03491 exonuclease family protein contains
exonuclease domain, Pfam:PF00929
Length = 354
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +3
Query: 522 CPFC-NQLIKRTALTQHIKYG-HNNIKPRCNICLKTFANPNNLKRHMM 659
C C Q K L +H+K H+ +P C +C K + +L+ H++
Sbjct: 17 CAACYRQFNKLEHLVEHMKISYHSGHEPTCGVCKKHCRSFESLREHLI 64
>At3g18360.1 68416.m02335 VQ motif-containing protein contains
PF05678: VQ motif
Length = 285
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/46 (30%), Positives = 28/46 (60%)
Frame = +2
Query: 20 AQITEVENLTHINEELITGDMMKDPKNIIKILTSTGSDGTILLKSD 157
A + ++ +TH +E+L G+ M DP ++K + T S+ T+ K++
Sbjct: 93 ALVQKLTGMTHSDEDLGGGNAMTDP-GVVKSINRTVSEPTVDRKNN 137
>At3g09290.1 68416.m01103 zinc finger (C2H2 type) family protein ;
contains Pfam profile: PF00096 Zinc finger, C2H2 type
Length = 172
Score = 28.7 bits (61), Expect = 4.2
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +1
Query: 415 NPAGENLCNLCGKGFESPEILTGHMLLH 498
N + +C+ C +GF + + L GHM +H
Sbjct: 30 NQSRSYVCSFCIRGFSNAQALGGHMNIH 57
>At5g67450.1 68418.m08504 zinc finger (C2H2 type) protein 1 (AZF1)
identical to Cys2/His2-type zinc finger protein 1
[Arabidopsis thaliana] gi|6009887|dbj|BAA85108
Length = 245
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = +1
Query: 436 CNLCGKGFESPEILTGHMLLH-SVTECSLT 522
C +CGK F S + L GH H T S+T
Sbjct: 99 CTVCGKSFSSYQALGGHKTSHRKPTNTSIT 128
>At3g57670.1 68416.m06425 zinc finger (C2H2 type) protein (WIP2)
identical to WIP2 protein [Arabidopsis thaliana]
gi|18027012|gb|AAL55722; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 383
Score = 28.3 bits (60), Expect = 5.6
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 603 CNICLKTFANPNNLKRHMMIH 665
C +C KTF NN++ HM H
Sbjct: 219 CPVCFKTFNRYNNMQMHMWGH 239
>At2g26940.1 68415.m03231 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 286
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 424 GENLCNLCGKGFESPEILTGHMLLH 498
G+ C LCGK F++ L GHM H
Sbjct: 117 GKIRCCLCGKEFQTMHSLFGHMRRH 141
Score = 27.9 bits (59), Expect = 7.3
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +1
Query: 418 PAGENLCNLCGKGFESPEILTGHMLLHSV 504
P ++ C +C K F S + GH+ +HS+
Sbjct: 45 PQRKHFCVICEKQFSSGKAYGGHVRIHSI 73
>At1g06560.1 68414.m00695 NOL1/NOP2/sun family protein contains Pfam
profile PF01189: NOL1/NOP2/sun family
Length = 599
Score = 28.3 bits (60), Expect = 5.6
Identities = 20/74 (27%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Frame = +2
Query: 8 DSNHAQITEVENLT-HINEELITGDMMKDPKNIIKILTSTGSDGTILLKSDNGVQYLAET 184
D +H ++ V+NL+ + IT + K++ L +T ++ TIL+ DN + +
Sbjct: 328 DRSHNKVLVVQNLSAEMGFTCITTCKLDALKSVC--LPTTLNESTILINGDNSSSMTSHS 385
Query: 185 QLVNDEEDGDGTSQ 226
+L ++EE TS+
Sbjct: 386 ELSSNEEMTSVTSR 399
>At1g03840.1 68414.m00365 zinc finger (C2H2 type) family protein
contains Zinc finger,C2H2 type,domain contains Pfam
domain, PF00096: Zinc finger, C2H2 type
Length = 506
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = +3
Query: 552 TALTQHIKYGHNNIKPRCNICLKTFANPNNLKRHMMIHSDIREFECD 692
T + +H H K +C C K +A ++ K H RE+ CD
Sbjct: 131 TGIKKHFCRKHGEKKWKCEKCAKRYAVQSDWKAHSKT-CGTREYRCD 176
>At5g41460.1 68418.m05035 fringe-related protein strong similarity
to unknown protein (pir||T13026) similarity to predicted
proteins + similar to hypothetical protein GB:AAC23643
[Arabidopsis thaliana] + weak similarity to Fringe
[Schistocerca gregaria](GI:6573138);Fringe encodes an
extracellular protein that regulates Notch signalling.
Length = 524
Score = 27.9 bits (59), Expect = 7.3
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -1
Query: 491 SMCPVKISGDSKPFPHK 441
S+ PVKISGD+ FP+K
Sbjct: 162 SLPPVKISGDTSKFPYK 178
>At5g22890.1 68418.m02677 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 373
Score = 27.9 bits (59), Expect = 7.3
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +3
Query: 603 CNICLKTFANPNNLKRHMMIHSD 671
C IC K F NL+ HM H D
Sbjct: 219 CQICGKGFKRDANLRMHMRAHGD 241
>At3g60580.1 68416.m06777 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 288
Score = 27.9 bits (59), Expect = 7.3
Identities = 19/48 (39%), Positives = 21/48 (43%), Gaps = 4/48 (8%)
Frame = +1
Query: 385 TEYEKHQY-KHNPA---GENLCNLCGKGFESPEILTGHMLLHSVTECS 516
TE E Y K N A G C CGK F+S + L GH H S
Sbjct: 154 TEEESEGYNKINRATTKGRYKCETCGKVFKSYQALGGHRASHKKNRVS 201
>At3g20880.1 68416.m02640 zinc finger (C2H2 type) protein (WIP4)
identical to WIP4 protein [Arabidopsis thaliana]
gi|18376500|emb|CAC86168; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 412
Score = 27.9 bits (59), Expect = 7.3
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 603 CNICLKTFANPNNLKRHMMIH 665
C +C KTF NN++ HM H
Sbjct: 258 CPLCFKTFNRYNNMQMHMWGH 278
>At3g19580.1 68416.m02483 zinc finger (C2H2 type) protein 2 (AZF2)
identical to Cys2/His2-type zinc finger protein 2
[Arabidopsis thaliana] gi|6009885|dbj|BAA85107
Length = 273
Score = 27.9 bits (59), Expect = 7.3
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
Frame = +1
Query: 418 PAGENL---CNLCGKGFESPEILTGHMLLHSV 504
P +NL CN+C K F S + L GH H +
Sbjct: 99 PESKNLPYKCNVCEKAFPSYQALGGHKASHRI 130
>At1g65130.1 68414.m07384 ubiquitin carboxyl-terminal
hydrolase-related contains Pfam profiles PF00443:
Ubiquitin carboxyl-terminal hydrolase, PF04780: Protein
of unknown function (DUF629), PF04781: Protein of
unknown function (DUF627)
Length = 1086
Score = 27.9 bits (59), Expect = 7.3
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = +3
Query: 549 RTALTQHIKYGHNNIKPR---CNICLKTFANPNNLKRHM 656
R AL Q + + N K R C C K F++P K H+
Sbjct: 211 RDALDQVLTFARENRKWRFWMCRTCSKKFSSPEECKNHL 249
>At1g51220.1 68414.m05761 zinc finger (C2H2 type) protein (WIP5)
identical to WIP5 protein [Arabidopsis thaliana]
gi|18376498|emb|CAC86167; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 337
Score = 27.9 bits (59), Expect = 7.3
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 603 CNICLKTFANPNNLKRHMMIH 665
C +C KTF NN++ HM H
Sbjct: 180 CPLCFKTFNRYNNMQMHMWGH 200
>At1g13290.1 68414.m01543 zinc finger (C2H2 type) family protein
contains Pfam domian PF00096: Zinc finger, C2H2 type
Length = 302
Score = 27.9 bits (59), Expect = 7.3
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 603 CNICLKTFANPNNLKRHMMIH 665
C++C KTF NN++ HM H
Sbjct: 103 CSVCNKTFNRFNNMQMHMWGH 123
>At5g43540.1 68418.m05323 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 137
Score = 27.5 bits (58), Expect = 9.7
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +1
Query: 436 CNLCGKGFESPEILTGHMLLH 498
C C +GF + + L GHM +H
Sbjct: 37 CTFCKRGFTNAQALGGHMNIH 57
>At5g43170.1 68418.m05269 zinc finger (C2H2 type) protein 3 (AZF3)
identical to Cys2/His2-type zinc finger protein 3
[Arabidopsis thaliana] gi|6009889|dbj|BAA85109
Length = 193
Score = 27.5 bits (58), Expect = 9.7
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +1
Query: 430 NLCNLCGKGFESPEILTGHMLLH 498
++C++CGK F + + L GH H
Sbjct: 118 HVCSVCGKSFATGQALGGHKRCH 140
>At5g36260.1 68418.m04374 aspartyl protease family protein contains
Pfam profile: PF00026 eukaryotic aspartyl protease
Length = 482
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +2
Query: 35 VENLTHINEELITGDMMKDPKNIIKILTSTGSDGTILLKSDNGVQYLAE 181
V N H N L D+ DP ++ L ST DG ++ S + YL +
Sbjct: 272 VPNQVHYNVILKGMDVDGDPIDLPPSLASTNGDGGTIIDSGTTLAYLPQ 320
>At5g25840.1 68418.m03066 expressed protein
Length = 173
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/73 (21%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = +1
Query: 316 IATVLQQEDGSFLCDCGEQFQDLTEYEKHQYKHNPAGENLCNLCGKGFES--PEILTGHM 489
++ + + ED C+C ++ T H+ + +G+ +C LC K E ++ +
Sbjct: 37 LSAISEVEDAK--CECCGMSEECTPEYIHRVRSKFSGKLICGLCEKAVEGEMEKMNNSEV 94
Query: 490 LLHSVTECSLTVH 528
L+ E ++ VH
Sbjct: 95 LMEKRREEAVKVH 107
>At3g49930.1 68416.m05460 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 215
Score = 27.5 bits (58), Expect = 9.7
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 436 CNLCGKGFESPEILTGHMLLH 498
C++CGK F S + L GH H
Sbjct: 96 CSVCGKSFPSYQALGGHKTSH 116
>At3g13950.1 68416.m01761 expressed protein
Length = 207
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/41 (31%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Frame = -3
Query: 141 IVPSDPVLVR-ILIMFLGSFIISPVINSSLICVKFSTSVIC 22
+V SD ++R IL++++G +++ PV+ + V+F +IC
Sbjct: 153 LVQSDDQIIRYILLIYVGFWVVFPVLILLIQLVRFIGWLIC 193
>At3g13810.1 68416.m01744 zinc finger (C2H2 type) family protein
similar to finger protein pcp1 GB:S48856 from [Solanum
tuberosum] contains Pfam domain, PF00096: Zinc finger,
C2H2 type
Length = 513
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = +3
Query: 552 TALTQHIKYGHNNIKPRCNICLKTFANPNNLKRHMMIHSDIREFECD 692
T + +H H K +C+ C K +A ++ K H +E+ CD
Sbjct: 161 TGIKKHFCRKHGEKKWKCDKCSKKYAVQSDCKAHSKT-CGTKEYRCD 206
>At2g28200.1 68415.m03424 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 284
Score = 27.5 bits (58), Expect = 9.7
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 436 CNLCGKGFESPEILTGHMLLH 498
C++CG F S + L GHM H
Sbjct: 190 CSICGSEFTSGQALGGHMRRH 210
>At2g24090.1 68415.m02877 ribosomal protein L35 family protein
contains Pfam profile PF01632: ribosomal protein L35
Length = 145
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -1
Query: 518 NEHSVTL*RSMCPVKISGDSKPFPHKLHRFS 426
+ HS++ R++ P+KIS + P KLH F+
Sbjct: 38 SSHSISGLRAVLPLKISTVASPNSQKLHSFT 68
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,653,736
Number of Sequences: 28952
Number of extensions: 306876
Number of successful extensions: 1089
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 945
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1086
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1604469728
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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