Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30842
         (616 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   6.2  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    21   8.2  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   8.2  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    21   8.2  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    21   8.2  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          21   8.2  

>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +3

Query: 342 SEENAISDITRSL*SVVSVKK 404
           SEEN+ SDIT ++ S  S+ +
Sbjct: 412 SEENSQSDITNNVNSPASMNQ 432


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +1

Query: 316 SLMTDVKHAAKKTLSRILHAV 378
           S+ TD  HA   T + +LHAV
Sbjct: 350 SIETDDLHATCGTKNALLHAV 370


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +2

Query: 35  SVYLIVFIQNIIILCTRAA 91
           +VYLI+FIQ  I   T+ A
Sbjct: 365 TVYLIMFIQFDIATTTKGA 383


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +2

Query: 35  SVYLIVFIQNIIILCTRAA 91
           +VYLI+FIQ  I   T+ A
Sbjct: 190 TVYLIMFIQFDIATTTKGA 208


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +1

Query: 268 ASPKACSHIGKSVVGSS 318
           ASPKAC  +     GSS
Sbjct: 171 ASPKACQFLYNQFPGSS 187


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +1

Query: 268 ASPKACSHIGKSVVGSS 318
           ASPKAC  +     GSS
Sbjct: 191 ASPKACQFLYNQFPGSS 207


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,029
Number of Sequences: 336
Number of extensions: 3069
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15666150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)