Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30842
(616 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_18076| Best HMM Match : GTP_EFTU (HMM E-Value=0.018) 69 2e-12
SB_24641| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 8e-10
SB_4642| Best HMM Match : Kunitz_BPTI (HMM E-Value=6.2e-28) 54 7e-08
SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 9e-08
SB_57724| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 50 1e-06
SB_22840| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 49 3e-06
SB_21308| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 8e-06
SB_53796| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 6e-05
SB_42994| Best HMM Match : NHL (HMM E-Value=8.4e-34) 42 3e-04
SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_59417| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_21309| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_44878| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_8918| Best HMM Match : GTP_EFTU (HMM E-Value=1.09301e-43) 32 0.32
SB_29596| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.74
SB_1682| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_9087| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_28312| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_16054| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_14721| Best HMM Match : Dicty_spore_N (HMM E-Value=6.8) 28 6.9
SB_3005| Best HMM Match : Dicty_spore_N (HMM E-Value=6.8) 28 6.9
>SB_18076| Best HMM Match : GTP_EFTU (HMM E-Value=0.018)
Length = 106
Score = 69.3 bits (162), Expect = 2e-12
Identities = 30/33 (90%), Positives = 32/33 (96%)
Frame = +3
Query: 510 DSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEM 608
DSGKSTTTGHLIYKCGGIDKRTIEKFEKE+ E+
Sbjct: 17 DSGKSTTTGHLIYKCGGIDKRTIEKFEKESSEV 49
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +1
Query: 463 MGKEKTHINIVVIGH 507
M KEK HINIVVIGH
Sbjct: 1 MPKEKIHINIVVIGH 15
>SB_24641| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1120
Score = 60.9 bits (141), Expect = 8e-10
Identities = 21/39 (53%), Positives = 30/39 (76%)
Frame = -2
Query: 252 YMKLYSYNQETKNCEEFIYGGCQGNDNRFSTLAECEQKC 136
Y + + YNQ ++ C++F+YGGCQGN N F + AECE+KC
Sbjct: 237 YFERWFYNQTSRKCKQFVYGGCQGNSNNFESKAECEKKC 275
>SB_4642| Best HMM Match : Kunitz_BPTI (HMM E-Value=6.2e-28)
Length = 65
Score = 54.4 bits (125), Expect = 7e-08
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -2
Query: 252 YMKLYSYNQETKNCEEFIYGGCQGNDNRFSTLAECEQKC 136
YM + + E K C+EFIYGGC GN+NRF T EC++ C
Sbjct: 24 YMPRFYFEIEKKECQEFIYGGCGGNENRFFTKRECQRIC 62
>SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2101
Score = 54.0 bits (124), Expect = 9e-08
Identities = 21/45 (46%), Positives = 31/45 (68%)
Frame = -2
Query: 267 GSLFRYMKLYSYNQETKNCEEFIYGGCQGNDNRFSTLAECEQKCI 133
GS +M LY +N + CE+F Y GC+GN NRF T+ +C++KC+
Sbjct: 689 GSCDGHMPLYFHNSTSGLCEKFHYSGCEGNANRFPTMRKCQRKCM 733
Score = 44.8 bits (101), Expect = 6e-05
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = -2
Query: 240 YSYNQETKNCEEFIYGGCQGNDNRFSTLAECEQKC 136
+ Y+ + C+ F YGGCQGN N F + A C +KC
Sbjct: 642 WHYDMRSSECKMFTYGGCQGNANNFESKAACLKKC 676
Score = 38.7 bits (86), Expect = 0.004
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = -2
Query: 267 GSLFRYMKLYSYNQETKNCEEFIYGGCQGNDNRFSTLAECEQKCIN 130
G+ F + + YN + CE F+Y G GN N F C++ C++
Sbjct: 212 GTGFAFKVHFFYNAAKRLCEPFVYSGMGGNKNNFKDKDACQRACMH 257
>SB_57724| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 3804
Score = 50.0 bits (114), Expect = 1e-06
Identities = 17/39 (43%), Positives = 27/39 (69%)
Frame = -2
Query: 249 MKLYSYNQETKNCEEFIYGGCQGNDNRFSTLAECEQKCI 133
M ++ YN+ T C+ F YGGC GN NRF + +C+++C+
Sbjct: 2135 MVMWFYNKRTGRCQTFNYGGCGGNGNRFRSRRQCQRRCV 2173
>SB_22840| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 4002
Score = 48.8 bits (111), Expect = 3e-06
Identities = 21/47 (44%), Positives = 29/47 (61%)
Frame = -2
Query: 273 RCGSLFRYMKLYSYNQETKNCEEFIYGGCQGNDNRFSTLAECEQKCI 133
RC +L M ++ YN++ C F YGGC GN NRF T CE++C+
Sbjct: 2062 RCRAL---MWMWYYNKKKGRCIRFAYGGCGGNPNRFKTKKACERRCM 2105
>SB_21308| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2641
Score = 47.6 bits (108), Expect = 8e-06
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = -2
Query: 276 WRCGSLFRYMKLYSYNQETKNCEEFIYGGCQGNDNRFSTLAECEQKCIN 130
W+ ++ +S+N +T C++ Y GC GN N F T EC+ C N
Sbjct: 2377 WQSPKCTSHLPKFSFNSQTGQCQQLAYNGCLGNLNNFDTAEECQNTCGN 2425
>SB_53796| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 487
Score = 44.8 bits (101), Expect = 6e-05
Identities = 18/39 (46%), Positives = 22/39 (56%)
Frame = -2
Query: 249 MKLYSYNQETKNCEEFIYGGCQGNDNRFSTLAECEQKCI 133
M + YN + C FIYGGC GN N F T EC+ C+
Sbjct: 38 MPQWYYNFKRHRCIRFIYGGCGGNPNNFDTKNECKSACM 76
>SB_42994| Best HMM Match : NHL (HMM E-Value=8.4e-34)
Length = 750
Score = 42.3 bits (95), Expect = 3e-04
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = -2
Query: 234 YNQETKNCEEFIYGGCQGNDNRFSTLAECEQKC 136
Y+ C EF+YGGC GN N+F + +EC + C
Sbjct: 520 YSTADNACHEFLYGGCGGNANKFDSKSECLEVC 552
>SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3261
Score = 40.3 bits (90), Expect = 0.001
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = -2
Query: 273 RCGSLFRYMKLYSYNQETKNCEEFIYGGCQGNDNRFSTLAECEQKC 136
R GS R+ + Y+ C F+Y GC GN+N F +C + C
Sbjct: 3161 RTGSCSRFTVRWFYDTNRGKCAPFVYTGCGGNENNFMNEQKCLETC 3206
>SB_59417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1822
Score = 38.7 bits (86), Expect = 0.004
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = -2
Query: 213 CEEFIYGGCQGNDNRFSTLAECEQKC 136
C+ F+Y GC GN NRF T +CE C
Sbjct: 238 CKPFVYSGCGGNTNRFVTKRKCEAFC 263
>SB_21309| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1286
Score = 37.9 bits (84), Expect = 0.006
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = -2
Query: 249 MKLYSYNQETKNCEEFIYGGCQGNDNRFSTLAECEQKCI 133
M+ Y Y+ ++ C++ + GC GN N FST+ C + CI
Sbjct: 582 MRAY-YDVTSRQCKQTEFWGCNGNHNLFSTVDSCSKTCI 619
>SB_44878| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1338
Score = 33.9 bits (74), Expect = 0.11
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -2
Query: 267 GSLFRYMKLYSYNQETKNCEEFIYGGCQGNDNRFST 160
G ++ + YN + C+ F++GGC N N F T
Sbjct: 1241 GPCMASIERFYYNAKIGKCQSFVFGGCLPNGNNFKT 1276
>SB_8918| Best HMM Match : GTP_EFTU (HMM E-Value=1.09301e-43)
Length = 547
Score = 32.3 bits (70), Expect = 0.32
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = +3
Query: 546 YKCGGIDKRTIEKFEKEAQEMGK 614
Y G +DKRT+EK+E+EA+E +
Sbjct: 166 YLTGQVDKRTLEKYEREAKEKNR 188
>SB_29596| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 84
Score = 31.1 bits (67), Expect = 0.74
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -2
Query: 222 TKNCEEFIYGGCQGNDNRFSTLA 154
TKNC+ F GGC ND+R LA
Sbjct: 13 TKNCKAFKSGGCPYNDSRLKGLA 35
>SB_1682| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 104
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -2
Query: 222 TKNCEEFIYGGCQGNDNRFSTLA 154
TKNC+ F GGC ND R LA
Sbjct: 21 TKNCKAFKSGGCPYNDPRLKGLA 43
>SB_9087| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 831
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +3
Query: 465 GQGKDSH*HCRHRTRDSGKSTTTGHLIYKCGGIDKR 572
G+G S CRH+ GKS H +YK G KR
Sbjct: 314 GEGSASRYQCRHKNA-RGKSARGAHSLYKKGDPQKR 348
>SB_28312| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 121
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -2
Query: 219 KNCEEFIYGGCQGNDNRFSTLA 154
KNC+ F GGC ND R LA
Sbjct: 14 KNCKAFKSGGCPYNDPRLKGLA 35
>SB_16054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 80
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -2
Query: 219 KNCEEFIYGGCQGNDNRFSTLA 154
KNC+ F GGC ND R LA
Sbjct: 10 KNCKAFKSGGCPYNDPRLKGLA 31
>SB_14721| Best HMM Match : Dicty_spore_N (HMM E-Value=6.8)
Length = 121
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -2
Query: 219 KNCEEFIYGGCQGNDNRFSTLA 154
KNC+ F GGC ND R LA
Sbjct: 14 KNCKAFKSGGCPYNDPRLKGLA 35
>SB_3005| Best HMM Match : Dicty_spore_N (HMM E-Value=6.8)
Length = 117
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -2
Query: 219 KNCEEFIYGGCQGNDNRFSTLA 154
KNC+ F GGC ND R LA
Sbjct: 10 KNCKAFKSGGCPYNDPRLKGLA 31
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,573,495
Number of Sequences: 59808
Number of extensions: 373776
Number of successful extensions: 816
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 781
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 815
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1512078125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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