Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30841
(741 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY146753-1|AAO12068.1| 311|Anopheles gambiae odorant-binding pr... 25 3.2
AY146750-1|AAO12065.1| 311|Anopheles gambiae odorant-binding pr... 25 3.2
AF043443-1|AAC05668.1| 232|Anopheles gambiae putative pupal-spe... 24 4.3
AF043439-1|AAC05664.1| 239|Anopheles gambiae putative pupal-spe... 24 4.3
AF043437-1|AAC05662.1| 239|Anopheles gambiae putative pupal-spe... 24 4.3
AF043434-1|AAC05659.1| 232|Anopheles gambiae putative pupal-spe... 24 4.3
AF043433-2|AAC05657.1| 239|Anopheles gambiae putative pupal-spe... 24 4.3
AB090821-1|BAC57917.1| 353|Anopheles gambiae gag-like protein p... 24 4.3
AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic acetylch... 23 9.9
AY645022-1|AAT92558.1| 165|Anopheles gambiae hairy protein. 23 9.9
AF043436-1|AAC05661.1| 263|Anopheles gambiae putative pupal-spe... 23 9.9
>AY146753-1|AAO12068.1| 311|Anopheles gambiae odorant-binding
protein AgamOBP34 protein.
Length = 311
Score = 24.6 bits (51), Expect = 3.2
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = +1
Query: 244 RTPLCVRHLITALRSACCTEVCRAHRC-YAYCGA 342
RT C+ + CT+V +A +C Y Y GA
Sbjct: 119 RTEACLAENLYTCDDDLCTQVYKAFQCYYQYYGA 152
>AY146750-1|AAO12065.1| 311|Anopheles gambiae odorant-binding
protein AgamOBP37 protein.
Length = 311
Score = 24.6 bits (51), Expect = 3.2
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = +1
Query: 244 RTPLCVRHLITALRSACCTEVCRAHRC-YAYCGA 342
RT C+ + CT+V +A +C Y Y GA
Sbjct: 119 RTEACLAENLYTCDDDLCTQVYKAFQCYYQYYGA 152
>AF043443-1|AAC05668.1| 232|Anopheles gambiae putative
pupal-specific cuticular proteinCP2d protein.
Length = 232
Score = 24.2 bits (50), Expect = 4.3
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +1
Query: 430 STHY*SFICQHSCDCFVQHRLPTKICDIAIPCNTKS 537
S H I QHS QH P + IA P KS
Sbjct: 48 SVHAAPAIYQHSAPAIYQHSAPAIVKTIAQPTIIKS 83
>AF043439-1|AAC05664.1| 239|Anopheles gambiae putative
pupal-specific cuticular proteinCP2b protein.
Length = 239
Score = 24.2 bits (50), Expect = 4.3
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +1
Query: 430 STHY*SFICQHSCDCFVQHRLPTKICDIAIPCNTKS 537
S H I QHS QH P + IA P KS
Sbjct: 48 SVHAAPAIYQHSAPAIYQHSAPAIVKTIAQPTIIKS 83
>AF043437-1|AAC05662.1| 239|Anopheles gambiae putative
pupal-specific cuticular proteinCP2b protein.
Length = 239
Score = 24.2 bits (50), Expect = 4.3
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +1
Query: 430 STHY*SFICQHSCDCFVQHRLPTKICDIAIPCNTKS 537
S H I QHS QH P + IA P KS
Sbjct: 48 SVHAAPAIYQHSAPAIYQHSAPAIVKTIAQPTIIKS 83
>AF043434-1|AAC05659.1| 232|Anopheles gambiae putative
pupal-specific cuticular proteinCP2d protein.
Length = 232
Score = 24.2 bits (50), Expect = 4.3
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +1
Query: 430 STHY*SFICQHSCDCFVQHRLPTKICDIAIPCNTKS 537
S H I QHS QH P + IA P KS
Sbjct: 48 SVHAAPAIYQHSAPAIYQHSAPAIVKTIAQPTIIKS 83
>AF043433-2|AAC05657.1| 239|Anopheles gambiae putative
pupal-specific cuticular proteinprotein.
Length = 239
Score = 24.2 bits (50), Expect = 4.3
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +1
Query: 430 STHY*SFICQHSCDCFVQHRLPTKICDIAIPCNTKS 537
S H I QHS QH P + IA P KS
Sbjct: 48 SVHAAPAIYQHSAPAIYQHSAPAIVKTIAQPTIIKS 83
>AB090821-1|BAC57917.1| 353|Anopheles gambiae gag-like protein
protein.
Length = 353
Score = 24.2 bits (50), Expect = 4.3
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Frame = +3
Query: 15 VVTQISATMSGGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTH--VIN 188
+VT+++ + G+D+LA +EDV + L E T +++RR DGT +
Sbjct: 202 IVTEMAEVLITGIDMLA-KKEDVERGL----QRALERTAVAATTSLWERR-DGTQRARVR 255
Query: 189 LRRTWEKLVLAARAVV 236
L R L+L R VV
Sbjct: 256 LPRRDTDLLLDKRIVV 271
>AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 3 protein.
Length = 710
Score = 23.0 bits (47), Expect = 9.9
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = -3
Query: 652 HGRRTNQPQHPSAGHGEAHH 593
HG T+ H S G G HH
Sbjct: 416 HGSPTHLHNHRSGGGGRHHH 435
>AY645022-1|AAT92558.1| 165|Anopheles gambiae hairy protein.
Length = 165
Score = 23.0 bits (47), Expect = 9.9
Identities = 9/34 (26%), Positives = 15/34 (44%)
Frame = -3
Query: 640 TNQPQHPSAGHGEAHHEASTLHVPTTTTSNQ*SG 539
T+ P H +H+E H ++SN +G
Sbjct: 68 TSSPYHAPPSPANSHYEPMECHSAVNSSSNSSTG 101
>AF043436-1|AAC05661.1| 263|Anopheles gambiae putative
pupal-specific cuticular proteinCP2c protein.
Length = 263
Score = 23.0 bits (47), Expect = 9.9
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +1
Query: 451 ICQHSCDCFVQHRLPTKICDIAIPCNTKS 537
I QHS QH P + IA P KS
Sbjct: 79 IYQHSAPAIYQHSAPAIVKTIAQPTIIKS 107
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 841,581
Number of Sequences: 2352
Number of extensions: 19680
Number of successful extensions: 38
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76091949
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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