Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30838
         (785 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY744466-1|AAV30885.1|  278|Homo sapiens FSHD region gene 2 prot...    34   0.67 
AY028079-2|AAK21977.1|  278|Homo sapiens FSHD Region Gene 2 prot...    34   0.67 
AL731696-1|CAH69901.1|  279|Homo sapiens novel protein similar t...    34   0.67 
AY714545-1|AAU14220.1|  278|Homo sapiens FSHD region gene 2 prot...    31   3.6  

>AY744466-1|AAV30885.1|  278|Homo sapiens FSHD region gene 2 protein
           protein.
          Length = 278

 Score = 33.9 bits (74), Expect = 0.67
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = -3

Query: 462 TCSMHVTQATRPCMTRSRRHRARGFDVTAVSLRMEL 355
           TC  H    +R C  RS+RHR+R   V   S+R  L
Sbjct: 140 TCDAHHRGRSRACTGRSKRHRSRALGVQTPSIRKSL 175


>AY028079-2|AAK21977.1|  278|Homo sapiens FSHD Region Gene 2 protein
           protein.
          Length = 278

 Score = 33.9 bits (74), Expect = 0.67
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = -3

Query: 462 TCSMHVTQATRPCMTRSRRHRARGFDVTAVSLRMEL 355
           TC  H    +R C  RS+RHR+R   V   S+R  L
Sbjct: 140 TCDAHHRGRSRACTGRSKRHRSRALGVQTPSIRKSL 175


>AL731696-1|CAH69901.1|  279|Homo sapiens novel protein similar to
           FSHD Region Gene 2 protein protein.
          Length = 279

 Score = 33.9 bits (74), Expect = 0.67
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = -3

Query: 462 TCSMHVTQATRPCMTRSRRHRARGFDVTAVSLRMEL 355
           TC  H    +R C  RS+RHR+R   V   S+R  L
Sbjct: 141 TCDAHHRGRSRACTGRSKRHRSRALGVQTPSIRKSL 176


>AY714545-1|AAU14220.1|  278|Homo sapiens FSHD region gene 2 protein
           protein.
          Length = 278

 Score = 31.5 bits (68), Expect = 3.6
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = -3

Query: 462 TCSMHVTQATRPCMTRSRRHRARGFDVTAVSLRMEL 355
           TC  H    +R C   S+RHR+R   V   S+R  L
Sbjct: 140 TCDAHHRGHSRACTGHSKRHRSRALGVQTPSIRKSL 175


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,280,886
Number of Sequences: 237096
Number of extensions: 2364023
Number of successful extensions: 4580
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4365
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4580
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9590293096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)