Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30837
(745 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 148 4e-36
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 147 9e-36
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 145 3e-35
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 132 2e-31
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 88 6e-18
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 1e-12
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 58 1e-08
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 42 7e-04
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 31 0.99
SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5) 31 1.3
SB_51671| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015) 30 2.3
SB_24762| Best HMM Match : Astacin (HMM E-Value=0) 29 3.0
SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3) 29 3.0
SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_9053| Best HMM Match : TIG (HMM E-Value=0) 29 5.3
SB_33576| Best HMM Match : Pentaxin (HMM E-Value=1.3e-06) 29 5.3
SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_42630| Best HMM Match : Ets (HMM E-Value=0) 28 9.2
SB_45916| Best HMM Match : Cadherin (HMM E-Value=0) 28 9.2
SB_34715| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_7343| Best HMM Match : EGF (HMM E-Value=0) 28 9.2
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 148 bits (359), Expect = 4e-36
Identities = 72/79 (91%), Positives = 76/79 (96%)
Frame = +2
Query: 509 AYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDV 688
AYF+DSQRQATKDAGTI+GLNVLRIINEPTAAAIAYGLDKK ERNVLI+DLGGGTFDV
Sbjct: 148 AYFHDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGVERNVLIYDLGGGTFDV 207
Query: 689 SILTIEDGIFEVKSTAGDT 745
S+LTIEDGIFEVKSTAGDT
Sbjct: 208 SVLTIEDGIFEVKSTAGDT 226
Score = 132 bits (319), Expect = 3e-31
Identities = 59/85 (69%), Positives = 70/85 (82%)
Frame = +3
Query: 255 PNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKHKIKVAYKGEDKTFFPEEVSSM 434
P NT+FDAKRLIGRKF+D V DM HWPF V+ +G + KI+V +KGE K+FFPEE+SSM
Sbjct: 63 PENTVFDAKRLIGRKFDDPVVARDMTHWPFHVIREGERPKIQVEFKGEKKSFFPEEISSM 122
Query: 435 VLTKMKETAEAYLGKTVQNAVITVP 509
VLTKMKETAEAYLG V +AV+TVP
Sbjct: 123 VLTKMKETAEAYLGAKVTDAVVTVP 147
Score = 132 bits (318), Expect = 4e-31
Identities = 61/63 (96%), Positives = 62/63 (98%)
Frame = +1
Query: 70 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 249
MAK PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF+DTERLIGDAAKNQVA
Sbjct: 1 MAKTPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVA 60
Query: 250 MNP 258
MNP
Sbjct: 61 MNP 63
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 147 bits (356), Expect = 9e-36
Identities = 72/79 (91%), Positives = 74/79 (93%)
Frame = +2
Query: 509 AYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDV 688
AYFNDSQRQATKDAG ISGLNVLRIINEPTAAAIAYGLDKK ERNVLIFDLGGGTFDV
Sbjct: 241 AYFNDSQRQATKDAGVISGLNVLRIINEPTAAAIAYGLDKKVGQERNVLIFDLGGGTFDV 300
Query: 689 SILTIEDGIFEVKSTAGDT 745
S+L+IEDGIFEVKST GDT
Sbjct: 301 SVLSIEDGIFEVKSTHGDT 319
Score = 132 bits (319), Expect = 3e-31
Identities = 60/64 (93%), Positives = 62/64 (96%)
Frame = +1
Query: 70 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 249
M KAPA+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTD ERL+GDAAKNQVA
Sbjct: 1 MTKAPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDEERLVGDAAKNQVA 60
Query: 250 MNPT 261
MNPT
Sbjct: 61 MNPT 64
Score = 109 bits (262), Expect = 2e-24
Identities = 62/110 (56%), Positives = 71/110 (64%), Gaps = 25/110 (22%)
Frame = +3
Query: 255 PNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKHKIKVAYKGEDKTFFPEEV--- 425
P NTIFDAKRLIGR+F+D V+ DMKHW FEVV++ G+ K+KV YKGE KTFF EEV
Sbjct: 63 PTNTIFDAKRLIGRRFDDPGVKDDMKHWSFEVVNEAGRPKVKVEYKGETKTFFAEEVVNE 122
Query: 426 ----------------------SSMVLTKMKETAEAYLGKTVQNAVITVP 509
SSMVL KMKETAEAYLG V +AV+TVP
Sbjct: 123 AGRPKVKVEYKGETKTFFAEEISSMVLNKMKETAEAYLGCKVTDAVVTVP 172
Score = 47.6 bits (108), Expect = 1e-05
Identities = 22/30 (73%), Positives = 26/30 (86%)
Frame = +3
Query: 420 EVSSMVLTKMKETAEAYLGKTVQNAVITVP 509
++SSMVL KMKETAEAYLG V +AV+TVP
Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVP 240
Score = 35.5 bits (78), Expect = 0.046
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 509 AYFNDSQRQATKDAG 553
AYFNDSQRQATKDAG
Sbjct: 173 AYFNDSQRQATKDAG 187
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 145 bits (352), Expect = 3e-35
Identities = 70/80 (87%), Positives = 77/80 (96%), Gaps = 1/80 (1%)
Frame = +2
Query: 509 AYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDV 688
AYFNDSQRQATKDAGTI+GLNVLR+INEPTAAA+AYGLDK +GE+NVLIFDLGGGTFDV
Sbjct: 148 AYFNDSQRQATKDAGTIAGLNVLRVINEPTAAALAYGLDKSLSGEKNVLIFDLGGGTFDV 207
Query: 689 SILTIEDG-IFEVKSTAGDT 745
SILTI+DG +FEVKSTAGDT
Sbjct: 208 SILTIDDGSLFEVKSTAGDT 227
Score = 133 bits (322), Expect = 1e-31
Identities = 62/85 (72%), Positives = 73/85 (85%)
Frame = +3
Query: 255 PNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKHKIKVAYKGEDKTFFPEEVSSM 434
P NTIFDAKRLIGR+++DATVQ+DMK WPF+++SD K KI+V YKGE KTF EE+SSM
Sbjct: 63 PENTIFDAKRLIGRRYDDATVQSDMKLWPFKIISDNNKPKIQVEYKGERKTFAAEEISSM 122
Query: 435 VLTKMKETAEAYLGKTVQNAVITVP 509
VL KMKETAEAYLG+ V +AVITVP
Sbjct: 123 VLGKMKETAEAYLGQKVTSAVITVP 147
Score = 127 bits (306), Expect = 1e-29
Identities = 57/63 (90%), Positives = 61/63 (96%)
Frame = +1
Query: 70 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 249
M KAPA+GIDLGTTYSCVGVFQ+GKVEIIANDQGNRTTPSYV FTDTERL+GDAAKNQVA
Sbjct: 1 MGKAPAIGIDLGTTYSCVGVFQNGKVEIIANDQGNRTTPSYVGFTDTERLVGDAAKNQVA 60
Query: 250 MNP 258
+NP
Sbjct: 61 LNP 63
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 132 bits (320), Expect = 2e-31
Identities = 61/79 (77%), Positives = 73/79 (92%)
Frame = +2
Query: 509 AYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDV 688
AYFND+QRQATKDAG I+GL V+RIINEPTAAAIAYG+DKK GE+N+L+FDLGGGTFDV
Sbjct: 846 AYFNDAQRQATKDAGAIAGLTVMRIINEPTAAAIAYGMDKK-EGEKNILVFDLGGGTFDV 904
Query: 689 SILTIEDGIFEVKSTAGDT 745
S+LTI++G+FEV +T GDT
Sbjct: 905 SLLTIDNGVFEVVATNGDT 923
Score = 111 bits (268), Expect = 4e-25
Identities = 53/85 (62%), Positives = 66/85 (77%)
Frame = +3
Query: 255 PNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKHKIKVAYKGEDKTFFPEEVSSM 434
P NT+FDAKRLIGR ++D +VQ D+K +PF+VV K ++V K E KTF EE+S+M
Sbjct: 761 PENTVFDAKRLIGRSWDDTSVQNDLKFFPFKVVDKNKKPHVQVKVKDEIKTFAAEEISAM 820
Query: 435 VLTKMKETAEAYLGKTVQNAVITVP 509
VLTKMKETAEAYLGK V +AV+TVP
Sbjct: 821 VLTKMKETAEAYLGKKVTHAVVTVP 845
Score = 99 bits (238), Expect = 2e-21
Identities = 46/58 (79%), Positives = 52/58 (89%), Gaps = 1/58 (1%)
Frame = +1
Query: 88 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNP 258
+GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAFT+ ERLIGD AKNQ+ NP
Sbjct: 704 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTEEGERLIGDGAKNQLTTNP 761
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 88.2 bits (209), Expect = 6e-18
Identities = 43/78 (55%), Positives = 57/78 (73%)
Frame = +2
Query: 509 AYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDV 688
A F+ QR AT A +++G+ VLR+INEPTAAA+AYGL KK G NV++ DLGGGT DV
Sbjct: 178 AEFDIKQRNATVKAASLAGITVLRVINEPTAAALAYGLHKK-EGVANVMVVDLGGGTLDV 236
Query: 689 SILTIEDGIFEVKSTAGD 742
S+L I+ G+F + AG+
Sbjct: 237 SLLNIQGGMFVTMAMAGN 254
Score = 65.3 bits (152), Expect = 5e-11
Identities = 29/63 (46%), Positives = 43/63 (68%), Gaps = 2/63 (3%)
Frame = +1
Query: 76 KAPAVGIDLGTTYSCVGVFQ--HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 249
K +GIDLGTTYSCVG +Q G+++I +++ ++ PS VAFTD L+G+ A +Q
Sbjct: 30 KPKIIGIDLGTTYSCVGAYQAISGRIDIFSDENDDKVVPSLVAFTDKGVLVGEKALSQAE 89
Query: 250 MNP 258
+NP
Sbjct: 90 INP 92
Score = 59.3 bits (137), Expect = 3e-09
Identities = 37/105 (35%), Positives = 52/105 (49%), Gaps = 1/105 (0%)
Frame = +3
Query: 255 PNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDG-GKHKIKVAYKGEDKTFFPEEVSS 431
P NTI+DAKR IG+ F + K + F V +D G V KG PEE+
Sbjct: 92 PKNTIYDAKRFIGKTFTKQELLEIGKLYQFRVTTDKRGNAGFLVGKKGNFTVITPEEIGG 151
Query: 432 MVLTKMKETAEAYLGKTVQNAVITVPRTSMTLKDKPQKMQVPSLA 566
V+ K++ AE L TV AV++VP +K + ++ SLA
Sbjct: 152 YVIKKLRTMAERNLTTTVTKAVMSVP-AEFDIKQRNATVKAASLA 195
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 70.9 bits (166), Expect = 1e-12
Identities = 37/84 (44%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Frame = +3
Query: 261 NTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKHKIKVAYKGEDKTFFPEEVSSMV 437
NTI KR IGRKF D VQ ++ H P++VV I+V Y G+ + F PE+V +M+
Sbjct: 121 NTISQFKRFIGRKFSDPAVQKEIPHLPYKVVELPNDSIGIQVQYLGKQEVFSPEQVMAML 180
Query: 438 LTKMKETAEAYLGKTVQNAVITVP 509
T++K TAE L V + VI+VP
Sbjct: 181 FTRLKTTAEIALKTKVTDCVISVP 204
Score = 58.0 bits (134), Expect = 8e-09
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Frame = +2
Query: 488 ECSYHGSAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKG---TGERNVLI 658
+C +Y+ D QR+ DA +GLN LR++N+ TA ++AYG+ K+ RNV+
Sbjct: 198 DCVISVPSYYTDRQRRCMLDASATAGLNCLRLMNDTTAVSLAYGIYKQDLPTDKPRNVVF 257
Query: 659 FDLGGGTFDVSILTIEDGIFEVKSTA 736
D+G + V I G +V STA
Sbjct: 258 VDIGHSSLQVCITAFLKGQLKVLSTA 283
Score = 49.6 bits (113), Expect = 3e-06
Identities = 22/52 (42%), Positives = 33/52 (63%)
Frame = +1
Query: 88 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ 243
VG D+G + V + G +E +AN+ +R TPS+V+ D +RLIG + KNQ
Sbjct: 4 VGFDVGNQSCYIAVARGGGIETVANEFSDRCTPSFVSLGDKQRLIGTSGKNQ 55
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 57.6 bits (133), Expect = 1e-08
Identities = 40/73 (54%), Positives = 44/73 (60%), Gaps = 26/73 (35%)
Frame = +2
Query: 509 AYFNDSQRQATKDAGTISGLN------------------------VLRIINEPTAAAIAY 616
A+FND+QRQATKDAGTI+GL+ VLRIINEPTAAAIAY
Sbjct: 47 AHFNDAQRQATKDAGTIAGLDVLSRTASERPPSRFRRRRPHGRSRVLRIINEPTAAAIAY 106
Query: 617 GLDKK--GTGERN 649
GLDK G ERN
Sbjct: 107 GLDKARGGKAERN 119
Score = 50.4 bits (115), Expect = 2e-06
Identities = 23/45 (51%), Positives = 34/45 (75%)
Frame = +3
Query: 375 IKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVP 509
I V GE ++F PE++S++VL ++K AEA+LG+ V+ AVITVP
Sbjct: 2 IAVEVCGEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVP 46
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 53.2 bits (122), Expect = 2e-07
Identities = 21/32 (65%), Positives = 28/32 (87%)
Frame = +2
Query: 650 VLIFDLGGGTFDVSILTIEDGIFEVKSTAGDT 745
+ ++DLGGGTFD+SIL I+ G+FEVK+T GDT
Sbjct: 2 IAVYDLGGGTFDISILEIQKGVFEVKATNGDT 33
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 44.4 bits (100), Expect = 1e-04
Identities = 23/66 (34%), Positives = 41/66 (62%), Gaps = 4/66 (6%)
Frame = +2
Query: 512 YFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKK----GTGERNVLIFDLGGGT 679
+FN ++R+A A + GLNVL+I+N TA A+ YGL ++ T E++ + +D+G +
Sbjct: 115 FFNQAERRALLRAAELVGLNVLQIMNSNTAVALNYGLFQQKSFNDTLEKHFMFYDMGASS 174
Query: 680 FDVSIL 697
+I+
Sbjct: 175 TVATIV 180
Score = 33.9 bits (74), Expect = 0.14
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +3
Query: 387 YKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVP 509
Y+ D TF PEE+ M+L + E + +++ V+TVP
Sbjct: 73 YQQSDVTFTPEELMGMILNHSRFIGEQFADHPIKDVVLTVP 113
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 41.5 bits (93), Expect = 7e-04
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +1
Query: 139 GKVEIIANDQGNRTTPSYVAFTDTERLI 222
G IIAND G+R TP+ VAF+DTE+LI
Sbjct: 83 GNTTIIANDAGDRVTPAMVAFSDTEKLI 110
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 31.1 bits (67), Expect = 0.99
Identities = 15/25 (60%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = +1
Query: 148 EIIANDQGNRTTPSYVAFT-DTERL 219
++I N +G+RTTPS VAFT + ERL
Sbjct: 7 KVIENAEGSRTTPSVVAFTPEGERL 31
>SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5)
Length = 634
Score = 30.7 bits (66), Expect = 1.3
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +2
Query: 650 VLIFDLGGGTFDVSILTIEDGIFEVK 727
V I+DLG GT++++IL E G++ ++
Sbjct: 319 VPIYDLGNGTYEMAILFHEPGVYSIR 344
>SB_51671| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 665
Score = 29.9 bits (64), Expect = 2.3
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +3
Query: 57 LKIQNGKSTRSRN-RSGYHVLLRWCLPAREGGDHRQRPGQQDHSVLCCVHRHRASHRRCR 233
L++ N + ++ + R GY L R C R + +R + H++L R +RC
Sbjct: 225 LRLVNTRDDKTHDKRPGYRKLSRVC-GGRRPNEPYERTARV-HTILSTETETRFCAKRCA 282
Query: 234 QEPGGDEPNNTIFDA 278
G +P NT F+A
Sbjct: 283 GTASGMDPKNTPFNA 297
>SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015)
Length = 600
Score = 29.9 bits (64), Expect = 2.3
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +2
Query: 656 IFDLGGGTFDVSILTIEDGIFEV 724
+FDLG G+++V L +E G++ V
Sbjct: 311 VFDLGNGSYEVLFLVMEPGVYRV 333
>SB_24762| Best HMM Match : Astacin (HMM E-Value=0)
Length = 733
Score = 29.5 bits (63), Expect = 3.0
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -3
Query: 551 LHLLWLVFESH*STRNRDNCILHSFAKIS 465
++ LWL F + S+ + D C+LHS A ++
Sbjct: 415 IYTLWLDFSRYYSSASSDICVLHSIAHLA 443
>SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3)
Length = 350
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = -1
Query: 256 GSSPPGSWRHLR*DARCL*TQHKTEWSCCPGRW 158
GS PPG W R +AR T +T +SC PG W
Sbjct: 206 GSCPPGFWCRKRREARAA-TDLET-YSCPPGFW 236
>SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1324
Score = 29.1 bits (62), Expect = 4.0
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 7/69 (10%)
Frame = -1
Query: 733 GGFHLEDTILDGKDGHVEGTAAEVK--DKYISFSSTLFVKTVSNRSSS--RFIDDSENVQ 566
G F L D+ G++GH EG+ +EV + ++ + F +T S S F ++S ++Q
Sbjct: 285 GVFVLVDSKDSGENGHTEGSNSEVGTIENFVKTQTKQFKQTACKYSESNLEFNENSAHLQ 344
Query: 565 ---ARDGTC 548
AR TC
Sbjct: 345 VYNARISTC 353
>SB_9053| Best HMM Match : TIG (HMM E-Value=0)
Length = 2990
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 16 HVC*VVLRTSNKTD*KYKMAKAPAVGIDL 102
HVC +V T K K ++K PA GI+L
Sbjct: 1200 HVCNIVSNTETKITCKLDVSKTPAPGIEL 1228
>SB_33576| Best HMM Match : Pentaxin (HMM E-Value=1.3e-06)
Length = 799
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -2
Query: 744 VSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVP 631
++PA+ S +PS V +D VP P I+ + VP
Sbjct: 268 LTPAISTQSTLPSGTVTLDQHNVPHPSGTITLDQHNVP 305
>SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1506
Score = 28.3 bits (60), Expect = 7.0
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = -1
Query: 463 SAVSFIFVSTMELTSSGKKVLSSPLYATLILCLPPSLTTSKGQCFMSACTVASSNLRPMR 284
S F+F ST + +S +KV+ SPL + + P+ G S C V NL
Sbjct: 1108 SPAKFVFTSTGIVRASTRKVVPSPLRRSKVPPTVPAQRLFNGDRVESICNV--QNLSRCP 1165
Query: 283 RLASNIVL 260
++++ VL
Sbjct: 1166 KISNATVL 1173
>SB_42630| Best HMM Match : Ets (HMM E-Value=0)
Length = 631
Score = 27.9 bits (59), Expect = 9.2
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +2
Query: 98 IWVPRTLALVSSSTGRWRSSPTTRATGPLRLMLRSQTPSVSSEMPPRT 241
IW P+ L++S R+S + PLR L P VSS +P T
Sbjct: 42 IWPPKKQHLMASYPSTSRASASRSHLFPLRTGLPPVPPLVSSPLPSPT 89
>SB_45916| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 1774
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = -1
Query: 658 DKYISFSSTLFVKTVSNRSSSRFIDDSEN 572
+K ISF +LF+ VSN S+ R+I +E+
Sbjct: 752 NKVISFGPSLFMDKVSNASAGRYICIAES 780
>SB_34715| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 977
Score = 27.9 bits (59), Expect = 9.2
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +2
Query: 98 IWVPRTLALVSSSTGRWRSSPTTRATGPLRLMLRSQTPSVSSEMPPRT 241
IW P+ L++S R+S + PLR L P VSS +P T
Sbjct: 388 IWPPKKQHLMASYPSTSRASASRSHLFPLRTGLPPVPPLVSSPLPSPT 435
>SB_7343| Best HMM Match : EGF (HMM E-Value=0)
Length = 1233
Score = 27.9 bits (59), Expect = 9.2
Identities = 17/72 (23%), Positives = 29/72 (40%)
Frame = +1
Query: 109 TYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTTQYSMPNVS 288
T++ + H I+ N G +TP + T A + + M PT V+
Sbjct: 559 THTTTSITLHPSSAILDNSLGPASTPRTTISSTTHVSSTPIASSSMVMTPTAINPSATVT 618
Query: 289 SDVSSKMLLCKP 324
+ V S ++ KP
Sbjct: 619 TTVPSTSVVVKP 630
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,768,704
Number of Sequences: 59808
Number of extensions: 592653
Number of successful extensions: 1961
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1757
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1948
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2010148439
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -