Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30836
         (738 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    23   7.4  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    23   7.4  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    23   9.8  

>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 21/97 (21%), Positives = 40/97 (41%), Gaps = 1/97 (1%)
 Frame = +1

Query: 79   FCWRMVSSWS*RLVSTDSAYSCSWRYILLLLPDNKKSQRSWQWSNKP-LYQEGH**SCGL 255
            FCW   S+    L S+ S +     ++   +   + + + ++W + P ++      S G 
Sbjct: 1120 FCWTDSSTVIYWLKSSPSRWKT---FVANRVSQIQNATKEFEWRHVPGIHNPADAVSRGR 1176

Query: 256  IDIEDITEKASLCRCWRSKNWPYCDGSHGPHNKETGD 366
               E + +K      W   +W   D  H P N E+G+
Sbjct: 1177 NPAEVVEDKL----WWHGPDWLVKDPKHWPKNIESGN 1209


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +1

Query: 295 RCWRSKNWPYCDGSHGPHNKETG 363
           + W   +  Y DG+  PHN++ G
Sbjct: 823 KLWDGYSLLYVDGNDYPHNQDLG 845


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +1

Query: 343 PHNKETGDNTGPVVVRHKP 399
           PH ++TG    P  + H+P
Sbjct: 146 PHQRDTGPALFPAPISHRP 164


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 754,079
Number of Sequences: 2352
Number of extensions: 18352
Number of successful extensions: 223
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 223
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 223
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75676146
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)