Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30836
         (738 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY095084-1|AAM11412.1|  133|Drosophila melanogaster RE49709p pro...    99   3e-21
AY071722-1|AAL49344.1|  133|Drosophila melanogaster RH38554p pro...    99   3e-21
AE014297-4356|AAF56878.1|  133|Drosophila melanogaster CG1458-PA...    99   3e-21
AY128477-1|AAM75070.1|  939|Drosophila melanogaster RE39339p pro...    29   5.0  
AE014298-628|AAF45943.3|  939|Drosophila melanogaster CG3626-PA ...    29   5.0  

>AY095084-1|AAM11412.1|  133|Drosophila melanogaster RE49709p
           protein.
          Length = 133

 Score =   99 bits (238), Expect = 3e-21
 Identities = 49/88 (55%), Positives = 62/88 (70%), Gaps = 5/88 (5%)
 Frame = +2

Query: 11  MYVVSNLVKVTIPNYLSSLPIPDSVGGWFRLGVKDWLALIPPTVVVGGISYYSYQTIKKA 190
           M  +S+LVK ++PNYLSSLP+PDS+GGWF+L  KDWLALIPPTVVV G+ Y +Y     A
Sbjct: 1   MEPISHLVKSSLPNYLSSLPVPDSIGGWFKLSFKDWLALIPPTVVVAGLGYTAYLAYCPA 60

Query: 191 REA-----GSGQINPCIRKDINKVVDLL 259
             A      SG+ N  IRK+  KVVD++
Sbjct: 61  ARASCAAKNSGRCNNHIRKNEPKVVDMI 88



 Score = 94.7 bits (225), Expect = 1e-19
 Identities = 33/46 (71%), Positives = 42/46 (91%)
 Frame = +1

Query: 253 LIDIEDITEKASLCRCWRSKNWPYCDGSHGPHNKETGDNTGPVVVR 390
           +ID+EDI EKA+ CRCW++KNWPYCDGSHG HNK+TGDN GP+V++
Sbjct: 87  MIDVEDIAEKAAFCRCWKTKNWPYCDGSHGEHNKQTGDNVGPIVIK 132


>AY071722-1|AAL49344.1|  133|Drosophila melanogaster RH38554p
           protein.
          Length = 133

 Score =   99 bits (238), Expect = 3e-21
 Identities = 49/88 (55%), Positives = 62/88 (70%), Gaps = 5/88 (5%)
 Frame = +2

Query: 11  MYVVSNLVKVTIPNYLSSLPIPDSVGGWFRLGVKDWLALIPPTVVVGGISYYSYQTIKKA 190
           M  +S+LVK ++PNYLSSLP+PDS+GGWF+L  KDWLALIPPTVVV G+ Y +Y     A
Sbjct: 1   MEPISHLVKSSLPNYLSSLPVPDSIGGWFKLSFKDWLALIPPTVVVAGLGYTAYLAYCPA 60

Query: 191 REA-----GSGQINPCIRKDINKVVDLL 259
             A      SG+ N  IRK+  KVVD++
Sbjct: 61  ARASCAAKNSGRCNNHIRKNEPKVVDMI 88



 Score = 94.7 bits (225), Expect = 1e-19
 Identities = 33/46 (71%), Positives = 42/46 (91%)
 Frame = +1

Query: 253 LIDIEDITEKASLCRCWRSKNWPYCDGSHGPHNKETGDNTGPVVVR 390
           +ID+EDI EKA+ CRCW++KNWPYCDGSHG HNK+TGDN GP+V++
Sbjct: 87  MIDVEDIAEKAAFCRCWKTKNWPYCDGSHGEHNKQTGDNVGPIVIK 132


>AE014297-4356|AAF56878.1|  133|Drosophila melanogaster CG1458-PA
           protein.
          Length = 133

 Score =   99 bits (238), Expect = 3e-21
 Identities = 49/88 (55%), Positives = 62/88 (70%), Gaps = 5/88 (5%)
 Frame = +2

Query: 11  MYVVSNLVKVTIPNYLSSLPIPDSVGGWFRLGVKDWLALIPPTVVVGGISYYSYQTIKKA 190
           M  +S+LVK ++PNYLSSLP+PDS+GGWF+L  KDWLALIPPTVVV G+ Y +Y     A
Sbjct: 1   MEPISHLVKSSLPNYLSSLPVPDSIGGWFKLSFKDWLALIPPTVVVAGLGYTAYLAYCPA 60

Query: 191 REA-----GSGQINPCIRKDINKVVDLL 259
             A      SG+ N  IRK+  KVVD++
Sbjct: 61  ARASCAAKNSGRCNNHIRKNEPKVVDMI 88



 Score = 94.7 bits (225), Expect = 1e-19
 Identities = 33/46 (71%), Positives = 42/46 (91%)
 Frame = +1

Query: 253 LIDIEDITEKASLCRCWRSKNWPYCDGSHGPHNKETGDNTGPVVVR 390
           +ID+EDI EKA+ CRCW++KNWPYCDGSHG HNK+TGDN GP+V++
Sbjct: 87  MIDVEDIAEKAAFCRCWKTKNWPYCDGSHGEHNKQTGDNVGPIVIK 132


>AY128477-1|AAM75070.1|  939|Drosophila melanogaster RE39339p
           protein.
          Length = 939

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +1

Query: 154 YILLLLPDNKKSQRSWQWSNKPLYQEG 234
           Y+ LLL D+      W W  +P+Y++G
Sbjct: 802 YVQLLLNDHDHEVDMWCWGGEPIYRDG 828


>AE014298-628|AAF45943.3|  939|Drosophila melanogaster CG3626-PA
           protein.
          Length = 939

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +1

Query: 154 YILLLLPDNKKSQRSWQWSNKPLYQEG 234
           Y+ LLL D+      W W  +P+Y++G
Sbjct: 802 YVQLLLNDHDHEVDMWCWGGEPIYRDG 828


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,134,407
Number of Sequences: 53049
Number of extensions: 666521
Number of successful extensions: 1544
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1502
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1541
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3334818762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)