Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30836
(738 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66521-18|CAO82066.1| 134|Caenorhabditis elegans Hypothetical p... 89 4e-18
Z66521-17|CAI46628.1| 103|Caenorhabditis elegans Hypothetical p... 89 4e-18
AB031233-1|BAA92262.1| 605|Caenorhabditis elegans kinesin like ... 89 4e-18
Z34802-9|CAB54281.3| 160|Caenorhabditis elegans Hypothetical pr... 31 0.85
U80839-9|AAB37922.2| 302|Caenorhabditis elegans Hypothetical pr... 29 2.6
U41534-1|AAB47593.3| 1437|Caenorhabditis elegans Temporarily ass... 29 4.5
AL022274-1|CAA18357.1| 349|Caenorhabditis elegans Hypothetical ... 29 4.5
Z70781-3|CAA94833.2| 352|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z81595-8|CAB54305.1| 345|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z81595-7|CAB54304.1| 358|Caenorhabditis elegans Hypothetical pr... 28 7.9
U80839-8|AAB37914.1| 238|Caenorhabditis elegans Hypothetical pr... 28 7.9
>Z66521-18|CAO82066.1| 134|Caenorhabditis elegans Hypothetical
protein W02B12.15b protein.
Length = 134
Score = 88.6 bits (210), Expect = 4e-18
Identities = 32/45 (71%), Positives = 39/45 (86%)
Frame = +1
Query: 256 IDIEDITEKASLCRCWRSKNWPYCDGSHGPHNKETGDNTGPVVVR 390
+DIEDI EK + CRCW+S+ WPYCDGSHG HNKETGDN GP++V+
Sbjct: 86 VDIEDIGEKKAFCRCWKSEKWPYCDGSHGKHNKETGDNVGPLIVK 130
>Z66521-17|CAI46628.1| 103|Caenorhabditis elegans Hypothetical
protein W02B12.15a protein.
Length = 103
Score = 88.6 bits (210), Expect = 4e-18
Identities = 32/45 (71%), Positives = 39/45 (86%)
Frame = +1
Query: 256 IDIEDITEKASLCRCWRSKNWPYCDGSHGPHNKETGDNTGPVVVR 390
+DIEDI EK + CRCW+S+ WPYCDGSHG HNKETGDN GP++V+
Sbjct: 55 VDIEDIGEKKAFCRCWKSEKWPYCDGSHGKHNKETGDNVGPLIVK 99
>AB031233-1|BAA92262.1| 605|Caenorhabditis elegans kinesin like
protein protein.
Length = 605
Score = 88.6 bits (210), Expect = 4e-18
Identities = 32/45 (71%), Positives = 39/45 (86%)
Frame = +1
Query: 256 IDIEDITEKASLCRCWRSKNWPYCDGSHGPHNKETGDNTGPVVVR 390
+DIEDI EK + CRCW+S+ WPYCDGSHG HNKETGDN GP++V+
Sbjct: 86 VDIEDIGEKKAFCRCWKSEKWPYCDGSHGKHNKETGDNVGPLIVK 130
>Z34802-9|CAB54281.3| 160|Caenorhabditis elegans Hypothetical
protein M88.7 protein.
Length = 160
Score = 31.1 bits (67), Expect = 0.85
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 289 LCRCWRSKNWPYCDGSH 339
LC C ++ N P+CDGSH
Sbjct: 130 LCNCKQTNNRPFCDGSH 146
>U80839-9|AAB37922.2| 302|Caenorhabditis elegans Hypothetical
protein ZC204.7 protein.
Length = 302
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +1
Query: 475 FKIKHF*SWFVGKCLKRNALYNIISVLFISYKTT 576
F I H S + KCLK+ ++ +IS+ F+S TT
Sbjct: 6 FPILHLPSLALQKCLKQMSVAQLISISFLSKNTT 39
>U41534-1|AAB47593.3| 1437|Caenorhabditis elegans Temporarily
assigned gene nameprotein 213 protein.
Length = 1437
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -3
Query: 280 SQLYPQCQ*VHNFINVLPDTRVYLTTASFSGFFYCLV 170
S L Q Q NFI + D+ YLT+ F YC++
Sbjct: 562 SYLLSQVQTFDNFIGPVVDSLRYLTSLEFDVLTYCII 598
>AL022274-1|CAA18357.1| 349|Caenorhabditis elegans Hypothetical
protein H24D24.1 protein.
Length = 349
Score = 28.7 bits (61), Expect = 4.5
Identities = 24/90 (26%), Positives = 38/90 (42%)
Frame = -3
Query: 430 YTCYLFVFSWLVCV*QRLGRCCRQFLYYEDRDYHHNKANFYSSSICKGMPSQLYPQCQ*V 251
YT +F+ +C RL ++ DYH+ SSIC +P Y C
Sbjct: 59 YTINIFLIGIAICDFIRL----LSYVLLALPDYHYRYQKSIMSSIC--IPPPSYASC--- 109
Query: 250 HNFINVLPDTRVYLTTASFSGFFYCLVRVV 161
F++ P RV+ A + G ++RV+
Sbjct: 110 FLFVHFTPIPRVFQDLAVWFGVAMAVLRVI 139
>Z70781-3|CAA94833.2| 352|Caenorhabditis elegans Hypothetical
protein F57A8.5 protein.
Length = 352
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +3
Query: 42 PFPTICRACRFQILLADGFVLEL 110
P+P C++CRFQ L G LE+
Sbjct: 65 PYPLKCQSCRFQRCLDAGMYLEV 87
>Z81595-8|CAB54305.1| 345|Caenorhabditis elegans Hypothetical
protein T22H2.6b protein.
Length = 345
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +1
Query: 409 IQINSKCSFQKNYVKTNYCIVLFKIKHF 492
I NSK +KN V+ +CI+ F IK+F
Sbjct: 6 INQNSKHITKKNDVRIFFCILYFNIKYF 33
>Z81595-7|CAB54304.1| 358|Caenorhabditis elegans Hypothetical
protein T22H2.6a protein.
Length = 358
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +1
Query: 409 IQINSKCSFQKNYVKTNYCIVLFKIKHF 492
I NSK +KN V+ +CI+ F IK+F
Sbjct: 6 INQNSKHITKKNDVRIFFCILYFNIKYF 33
>U80839-8|AAB37914.1| 238|Caenorhabditis elegans Hypothetical
protein ZC204.10 protein.
Length = 238
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +1
Query: 469 VLFKIKHF*SWFVGKCLKRNALYNIISVLFISYKT 573
V F I S + KCLKR ++ +IS+ F+S KT
Sbjct: 4 VPFPILRLPSSALRKCLKRMSVAQLISISFLSKKT 38
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,366,483
Number of Sequences: 27780
Number of extensions: 353370
Number of successful extensions: 860
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 833
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 860
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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