Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30835
(722 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_O02394 Cluster: Dribble protein; n=4; Fungi/Metazoa gro... 138 1e-31
UniRef50_A0FIK6 Cluster: HRB2 variant B; n=15; Coelomata|Rep: HR... 136 4e-31
UniRef50_Q13601 Cluster: KRR1 small subunit processome component... 134 2e-30
UniRef50_O16311 Cluster: Putative uncharacterized protein; n=2; ... 129 8e-29
UniRef50_Q54UU6 Cluster: Putative uncharacterized protein; n=1; ... 119 6e-26
UniRef50_P25586 Cluster: Ribosomal RNA assembly protein KRR1; n=... 111 1e-23
UniRef50_Q5N8D1 Cluster: Rev protein (42.9 kD)-like; n=9; Magnol... 109 7e-23
UniRef50_A0E352 Cluster: Chromosome undetermined scaffold_76, wh... 108 2e-22
UniRef50_Q5KHS1 Cluster: RRNA processing-related protein, putati... 105 1e-21
UniRef50_Q587A1 Cluster: Ribosomal RNA assembly protein, putativ... 103 4e-21
UniRef50_Q86E68 Cluster: Clone ZZD933 mRNA sequence; n=1; Schist... 98 2e-19
UniRef50_Q7QYA4 Cluster: GLP_387_52551_53537; n=2; Giardia intes... 89 1e-16
UniRef50_A2EWA3 Cluster: Ribosomal RNA assembly protein mis3, pu... 87 4e-16
UniRef50_Q8SVW2 Cluster: Putative uncharacterized protein ECU04_... 84 3e-15
UniRef50_Q9AW78 Cluster: Rev interacting protein Rip-1-like prot... 77 6e-13
UniRef50_Q6L2G6 Cluster: Putative RNA-binding protein; n=1; Picr... 43 0.007
UniRef50_A7D0D1 Cluster: KH, type 1, domain protein; n=6; Euryar... 37 0.44
UniRef50_Q57885 Cluster: KH domain-containing protein MJ0443; n=... 37 0.44
UniRef50_Q2NEN8 Cluster: Predicted RNA-binding protein; n=3; Met... 36 1.0
UniRef50_Q9V136 Cluster: Predicted RNA-binding protein; n=4; The... 36 1.3
UniRef50_Q3LWA8 Cluster: Putative uncharacterized protein; n=1; ... 35 2.3
UniRef50_Q1VRF0 Cluster: Putative uncharacterized protein; n=1; ... 34 3.1
UniRef50_Q9FKT4 Cluster: RNA-binding protein-like; n=17; Magnoli... 34 4.1
UniRef50_A7T5W9 Cluster: Predicted protein; n=1; Nematostella ve... 34 4.1
UniRef50_UPI000065DAE4 Cluster: Homolog of Homo sapiens "PREDICT... 33 7.1
UniRef50_Q8W574 Cluster: At1g09660/F21M12_5; n=8; Magnoliophyta|... 33 7.1
UniRef50_Q5CLV8 Cluster: Putative uncharacterized protein; n=2; ... 33 7.1
UniRef50_O45180 Cluster: Putative uncharacterized protein; n=2; ... 33 7.1
UniRef50_Q979F9 Cluster: Putative uncharacterized protein TVG123... 33 7.1
UniRef50_Q8I4C4 Cluster: Putative uncharacterized protein; n=2; ... 33 9.4
UniRef50_Q4DJ36 Cluster: Putative uncharacterized protein; n=2; ... 33 9.4
>UniRef50_O02394 Cluster: Dribble protein; n=4; Fungi/Metazoa
group|Rep: Dribble protein - Drosophila melanogaster
(Fruit fly)
Length = 327
Score = 138 bits (335), Expect = 1e-31
Identities = 61/84 (72%), Positives = 74/84 (88%)
Frame = +3
Query: 258 WPLVQKILSEHHIVAELDLIEGSLTVKTTRKTWDPYIIIKARDFMKLLSRSVPFEQASRV 437
WPLV++ L+EHH+ AELDL+EGS+ VKT+RKTWDPYIIIKARD +KL++RSVPFEQA RV
Sbjct: 58 WPLVEQCLAEHHLKAELDLMEGSMVVKTSRKTWDPYIIIKARDMIKLMARSVPFEQAKRV 117
Query: 438 LDDEIGCDIIKINSFVRKKETFLK 509
L D+IGCDIIKI + V KKE F+K
Sbjct: 118 LQDDIGCDIIKIGNLVHKKEKFVK 141
Score = 117 bits (282), Expect = 3e-25
Identities = 56/79 (70%), Positives = 66/79 (83%), Gaps = 1/79 (1%)
Frame = +2
Query: 488 QKRNLFERRQRLIGPQGVTLKSIELLTECYVLVQGNTVSAVGPYKGLVQVRRIVEDTMKN 667
+K +RRQRLIGP G TLKSIELLT+CYVLVQGNTVSA+GPYKGL QVR IV +TM N
Sbjct: 135 KKEKFVKRRQRLIGPNGATLKSIELLTDCYVLVQGNTVSALGPYKGLQQVRDIVLETMNN 194
Query: 668 IHPMYNIKS*WLK-EIMKD 721
+HP+YNIK+ +K E+MKD
Sbjct: 195 VHPIYNIKALMIKRELMKD 213
Score = 82.2 bits (194), Expect = 1e-14
Identities = 35/54 (64%), Positives = 42/54 (77%)
Frame = +1
Query: 124 TNSVDNAWAMKIPKFTPDDNPHGLLEESKFATLFPKYREQYLKDAGPWYRKYLA 285
T VDNAW+MKIP F +DNPHG++EES FATLFPKYRE+YLK+ P + LA
Sbjct: 13 TEPVDNAWSMKIPAFRQEDNPHGMVEESSFATLFPKYRERYLKEVWPLVEQCLA 66
>UniRef50_A0FIK6 Cluster: HRB2 variant B; n=15; Coelomata|Rep: HRB2
variant B - Homo sapiens (Human)
Length = 324
Score = 136 bits (330), Expect = 4e-31
Identities = 63/100 (63%), Positives = 78/100 (78%)
Frame = +3
Query: 219 IISKVSRAIPERCWPLVQKILSEHHIVAELDLIEGSLTVKTTRKTWDPYIIIKARDFMKL 398
+ K A + CWPLVQK L+EHH+ A LDLIEGS+TV TT+KT+DPYIII+ARD +KL
Sbjct: 63 LFPKYREAYLKECWPLVQKALNEHHVNATLDLIEGSMTVCTTKKTFDPYIIIRARDLIKL 122
Query: 399 LSRSVPFEQASRVLDDEIGCDIIKINSFVRKKETFLKDGR 518
L+RSV FEQA R+L D++ CDIIKI S VR KE F+K G+
Sbjct: 123 LARSVSFEQAVRILQDDVACDIIKIGSLVRNKERFVKRGQ 162
Score = 104 bits (250), Expect = 2e-21
Identities = 44/67 (65%), Positives = 57/67 (85%)
Frame = +2
Query: 491 KRNLFERRQRLIGPQGVTLKSIELLTECYVLVQGNTVSAVGPYKGLVQVRRIVEDTMKNI 670
K +R QRL+GP+G TLK++ELLT CY++VQGNTVSA+GP+ GL +VR++V DTMKNI
Sbjct: 154 KERFVKRGQRLVGPKGSTLKALELLTNCYIMVQGNTVSAIGPFSGLKEVRKVVLDTMKNI 213
Query: 671 HPMYNIK 691
HP+YNIK
Sbjct: 214 HPIYNIK 220
Score = 66.1 bits (154), Expect = 8e-10
Identities = 32/59 (54%), Positives = 39/59 (66%)
Frame = +1
Query: 106 NMEVEETNSVDNAWAMKIPKFTPDDNPHGLLEESKFATLFPKYREQYLKDAGPWYRKYL 282
N + E +V + W K P F+ +DNP GLLEES FATLFPKYRE YLK+ P +K L
Sbjct: 27 NQDESELLTVPDGW--KEPAFSKEDNPRGLLEESSFATLFPKYREAYLKECWPLVQKAL 83
>UniRef50_Q13601 Cluster: KRR1 small subunit processome component
homolog; n=44; Eukaryota|Rep: KRR1 small subunit
processome component homolog - Homo sapiens (Human)
Length = 381
Score = 134 bits (325), Expect = 2e-30
Identities = 62/97 (63%), Positives = 76/97 (78%)
Frame = +3
Query: 219 IISKVSRAIPERCWPLVQKILSEHHIVAELDLIEGSLTVKTTRKTWDPYIIIKARDFMKL 398
+ K A + CWPLVQK L+EHH+ A LDLIEGS+TV TT+KT+DPYIII+ARD +KL
Sbjct: 63 LFPKYREAYLKECWPLVQKALNEHHVNATLDLIEGSMTVCTTKKTFDPYIIIRARDLIKL 122
Query: 399 LSRSVPFEQASRVLDDEIGCDIIKINSFVRKKETFLK 509
L+RSV FEQA R+L D++ CDIIKI S VR KE F+K
Sbjct: 123 LARSVSFEQAVRILQDDVACDIIKIGSLVRNKERFVK 159
Score = 112 bits (270), Expect = 7e-24
Identities = 51/78 (65%), Positives = 65/78 (83%), Gaps = 1/78 (1%)
Frame = +2
Query: 491 KRNLFERRQRLIGPQGVTLKSIELLTECYVLVQGNTVSAVGPYKGLVQVRRIVEDTMKNI 670
K +RRQRLIGP+G TLK++ELLT CY++VQGNTVSA+GP+ GL +VR++V DTMKNI
Sbjct: 154 KERFVKRRQRLIGPKGSTLKALELLTNCYIMVQGNTVSAIGPFSGLKEVRKVVLDTMKNI 213
Query: 671 HPMYNIKS*WLK-EIMKD 721
HP+YNIKS +K E+ KD
Sbjct: 214 HPIYNIKSLMIKRELAKD 231
Score = 66.1 bits (154), Expect = 8e-10
Identities = 32/59 (54%), Positives = 39/59 (66%)
Frame = +1
Query: 106 NMEVEETNSVDNAWAMKIPKFTPDDNPHGLLEESKFATLFPKYREQYLKDAGPWYRKYL 282
N + E +V + W K P F+ +DNP GLLEES FATLFPKYRE YLK+ P +K L
Sbjct: 27 NQDESELLTVPDGW--KEPAFSKEDNPRGLLEESSFATLFPKYREAYLKECWPLVQKAL 83
>UniRef50_O16311 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 370
Score = 129 bits (311), Expect = 8e-29
Identities = 57/84 (67%), Positives = 73/84 (86%)
Frame = +3
Query: 258 WPLVQKILSEHHIVAELDLIEGSLTVKTTRKTWDPYIIIKARDFMKLLSRSVPFEQASRV 437
WPL++K L EH + A+LDL+EG++ V+TTRKTWDPYII+KAR+ +KLLSRSVP+EQA RV
Sbjct: 81 WPLIEKALGEHFLKADLDLLEGTMCVRTTRKTWDPYIIMKAREVIKLLSRSVPYEQAIRV 140
Query: 438 LDDEIGCDIIKINSFVRKKETFLK 509
L+DEI C+IIKI+S VR KE F+K
Sbjct: 141 LEDEIYCEIIKISSMVRNKERFVK 164
Score = 95.1 bits (226), Expect = 2e-18
Identities = 46/78 (58%), Positives = 57/78 (73%), Gaps = 1/78 (1%)
Frame = +2
Query: 491 KRNLFERRQRLIGPQGVTLKSIELLTECYVLVQGNTVSAVGPYKGLVQVRRIVEDTMKNI 670
K +RR RLIG G TLK++ELLT+CYV VQG TV AVGP GL Q+ +IV D MKNI
Sbjct: 159 KERFVKRRARLIGNDGATLKALELLTQCYVCVQGGTVCAVGPLAGLKQINQIVTDCMKNI 218
Query: 671 HPMYNIKS*WLK-EIMKD 721
HP+YNIK+ +K E+ K+
Sbjct: 219 HPIYNIKTMMIKRELSKN 236
Score = 56.0 bits (129), Expect = 9e-07
Identities = 25/49 (51%), Positives = 35/49 (71%)
Frame = +1
Query: 136 DNAWAMKIPKFTPDDNPHGLLEESKFATLFPKYREQYLKDAGPWYRKYL 282
D W I F+ +DNP+GLL+ES F++LFPKYRE+Y+K++ P K L
Sbjct: 41 DAEW-WDINTFSKEDNPNGLLQESSFSSLFPKYREKYIKESWPLIEKAL 88
>UniRef50_Q54UU6 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 374
Score = 119 bits (287), Expect = 6e-26
Identities = 54/87 (62%), Positives = 66/87 (75%)
Frame = +3
Query: 249 ERCWPLVQKILSEHHIVAELDLIEGSLTVKTTRKTWDPYIIIKARDFMKLLSRSVPFEQA 428
+ W LV+ +L EH I +LDLIEGS+TV TT+K WDP I+KARD +KLLSRSVPFE A
Sbjct: 73 QEIWKLVENVLHEHGIECKLDLIEGSMTVTTTKKCWDPVAILKARDLIKLLSRSVPFEHA 132
Query: 429 SRVLDDEIGCDIIKINSFVRKKETFLK 509
+VL+D+ CDIIKI FVR KE F+K
Sbjct: 133 QKVLNDDYNCDIIKIGGFVRNKERFVK 159
Score = 114 bits (274), Expect = 2e-24
Identities = 53/78 (67%), Positives = 65/78 (83%), Gaps = 1/78 (1%)
Frame = +2
Query: 491 KRNLFERRQRLIGPQGVTLKSIELLTECYVLVQGNTVSAVGPYKGLVQVRRIVEDTMKNI 670
K +RRQRL+GP G TLK+IELLT+CYVLVQGNTVS++GP+ GLVQVR+IVED +KNI
Sbjct: 154 KERFVKRRQRLVGPDGSTLKAIELLTKCYVLVQGNTVSSIGPWNGLVQVRKIVEDCLKNI 213
Query: 671 HPMYNIKS*WLK-EIMKD 721
HP+YNIK +K E+ KD
Sbjct: 214 HPIYNIKELMIKRELEKD 231
Score = 36.3 bits (80), Expect = 0.77
Identities = 14/21 (66%), Positives = 19/21 (90%)
Frame = +1
Query: 193 LLEESKFATLFPKYREQYLKD 255
L ++S FATLFPKYRE+YL++
Sbjct: 54 LYDDSSFATLFPKYREKYLQE 74
>UniRef50_P25586 Cluster: Ribosomal RNA assembly protein KRR1; n=35;
Eukaryota|Rep: Ribosomal RNA assembly protein KRR1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 316
Score = 111 bits (268), Expect = 1e-23
Identities = 50/84 (59%), Positives = 66/84 (78%)
Frame = +3
Query: 258 WPLVQKILSEHHIVAELDLIEGSLTVKTTRKTWDPYIIIKARDFMKLLSRSVPFEQASRV 437
W V + L +H+I LDL+EGS+TVKTTRKT+DP II+KARD +KLL+RSVPF QA ++
Sbjct: 57 WNDVTRALDKHNIACVLDLVEGSMTVKTTRKTYDPAIILKARDLIKLLARSVPFPQAVKI 116
Query: 438 LDDEIGCDIIKINSFVRKKETFLK 509
L D++ CD+IKI +FV KE F+K
Sbjct: 117 LQDDMACDVIKIGNFVTNKERFVK 140
Score = 110 bits (264), Expect = 4e-23
Identities = 48/74 (64%), Positives = 62/74 (83%)
Frame = +2
Query: 485 SQKRNLFERRQRLIGPQGVTLKSIELLTECYVLVQGNTVSAVGPYKGLVQVRRIVEDTMK 664
+ K +RRQRL+GP G TLK++ELLT+CY+LVQGNTVSA+GP+KGL +VRR+VED MK
Sbjct: 133 TNKERFVKRRQRLVGPNGNTLKALELLTKCYILVQGNTVSAMGPFKGLKEVRRVVEDCMK 192
Query: 665 NIHPMYNIKS*WLK 706
NIHP+Y+IK +K
Sbjct: 193 NIHPIYHIKELMIK 206
Score = 44.4 bits (100), Expect = 0.003
Identities = 24/46 (52%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Frame = +1
Query: 121 ETNSVDNAWAMKIPKFTPDDNPHG--LLEESKFATLFPKYREQYLK 252
+T+ +D W KI +F +DN G EES F TLFPKYRE YLK
Sbjct: 12 DTDDIDK-W--KIEEFKEEDNASGQPFAEESSFMTLFPKYRESYLK 54
>UniRef50_Q5N8D1 Cluster: Rev protein (42.9 kD)-like; n=9;
Magnoliophyta|Rep: Rev protein (42.9 kD)-like - Oryza
sativa subsp. japonica (Rice)
Length = 421
Score = 109 bits (262), Expect = 7e-23
Identities = 50/87 (57%), Positives = 65/87 (74%)
Frame = +3
Query: 249 ERCWPLVQKILSEHHIVAELDLIEGSLTVKTTRKTWDPYIIIKARDFMKLLSRSVPFEQA 428
+ WP+V+ L E + EL+L+EGS+TV TTRKT DPYIIIKA + +KLLSRSVP QA
Sbjct: 101 QEAWPIVKGALKEFGVACELNLVEGSMTVSTTRKTKDPYIIIKANELIKLLSRSVPAPQA 160
Query: 429 SRVLDDEIGCDIIKINSFVRKKETFLK 509
++L+DE+ C IIKI S +R KE F+K
Sbjct: 161 IKILNDEMSCAIIKIGSIIRNKERFVK 187
Score = 87.8 bits (208), Expect = 2e-16
Identities = 44/83 (53%), Positives = 61/83 (73%), Gaps = 2/83 (2%)
Frame = +2
Query: 479 ICSQKRNLFERRQRLIGPQGVTLKSIELLTECYVLVQGNTVSAVGPYKGLVQVRRIVEDT 658
I K +RR RL+GP TLK+IE+LT CY+LVQGNT +A+G +KGL QV R+VED
Sbjct: 178 IIRNKERFVKRRGRLLGPNLSTLKAIEILTGCYILVQGNTAAAMGYWKGLKQVVRVVEDC 237
Query: 659 MKNI-HPMYNIKS*WLK-EIMKD 721
+KN+ HP+Y+IK +K E++K+
Sbjct: 238 IKNVKHPVYHIKELLIKRELVKN 260
Score = 35.5 bits (78), Expect = 1.3
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +1
Query: 154 KIPKFTPDDNPHGLLEESKFATLFPKYR 237
KI +F P N G+LE + F+TLFP+YR
Sbjct: 41 KIEEFDPSWNEGGMLEVTSFSTLFPQYR 68
>UniRef50_A0E352 Cluster: Chromosome undetermined scaffold_76, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_76,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 348
Score = 108 bits (259), Expect = 2e-22
Identities = 50/82 (60%), Positives = 65/82 (79%)
Frame = +3
Query: 264 LVQKILSEHHIVAELDLIEGSLTVKTTRKTWDPYIIIKARDFMKLLSRSVPFEQASRVLD 443
+V+K + +H I AEL+L+EGSLTVKTT KTWDP+ I+KARD +KLL+RSVP +Q R+L+
Sbjct: 67 MVKKSMKDHGIRAELNLMEGSLTVKTTNKTWDPWAIMKARDIIKLLARSVPVQQCLRLLE 126
Query: 444 DEIGCDIIKINSFVRKKETFLK 509
D CDIIKI S+ R KE F+K
Sbjct: 127 DGTFCDIIKIRSYTRNKEKFVK 148
Score = 99.5 bits (237), Expect = 7e-20
Identities = 44/78 (56%), Positives = 61/78 (78%), Gaps = 1/78 (1%)
Frame = +2
Query: 491 KRNLFERRQRLIGPQGVTLKSIELLTECYVLVQGNTVSAVGPYKGLVQVRRIVEDTMKNI 670
K +RRQRLIGP G TLK++ELLT+CY++VQG+TVS +G +K L VR++V DTM+N+
Sbjct: 143 KEKFVKRRQRLIGPNGATLKALELLTDCYIMVQGSTVSVIGNWKNLKTVRKVVVDTMQNV 202
Query: 671 HPMYNIKS*WLK-EIMKD 721
HP+Y+IK +K E+ KD
Sbjct: 203 HPIYSIKELMIKRELSKD 220
Score = 44.8 bits (101), Expect = 0.002
Identities = 19/34 (55%), Positives = 25/34 (73%)
Frame = +1
Query: 154 KIPKFTPDDNPHGLLEESKFATLFPKYREQYLKD 255
KIP+ P + LL ES FATLFPKYRE+Y+++
Sbjct: 30 KIPEIQPGEMNGSLLAESSFATLFPKYREKYIQE 63
>UniRef50_Q5KHS1 Cluster: RRNA processing-related protein, putative;
n=1; Filobasidiella neoformans|Rep: RRNA
processing-related protein, putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 402
Score = 105 bits (252), Expect = 1e-21
Identities = 50/82 (60%), Positives = 61/82 (74%), Gaps = 1/82 (1%)
Frame = +2
Query: 479 ICSQKRNLFERRQRLIGPQGVTLKSIELLTECYVLVQGNTVSAVGPYKGLVQVRRIVEDT 658
I K +RRQR++GP G TLK+IELLTECYVLVQGNTVS +G YKGL +VRRI+ D
Sbjct: 153 IVRNKERFVKRRQRIVGPNGSTLKAIELLTECYVLVQGNTVSVMGSYKGLKEVRRIILDC 212
Query: 659 MKNIHPMYNIKS*WL-KEIMKD 721
M NIHP+Y IK + +E+ KD
Sbjct: 213 MNNIHPIYRIKELMIRRELAKD 234
Score = 103 bits (248), Expect = 3e-21
Identities = 46/84 (54%), Positives = 58/84 (69%)
Frame = +3
Query: 258 WPLVQKILSEHHIVAELDLIEGSLTVKTTRKTWDPYIIIKARDFMKLLSRSVPFEQASRV 437
W + L + + ELDL++G +TVKTTRKTWDPYII K RD +KLL+R V QA ++
Sbjct: 79 WSSITSALEAYGLACELDLVQGKMTVKTTRKTWDPYIIFKGRDLLKLLARGVNAPQAIKI 138
Query: 438 LDDEIGCDIIKINSFVRKKETFLK 509
L+D I CDIIKI VR KE F+K
Sbjct: 139 LEDGIACDIIKIGGIVRNKERFVK 162
Score = 42.3 bits (95), Expect = 0.012
Identities = 21/44 (47%), Positives = 28/44 (63%)
Frame = +1
Query: 121 ETNSVDNAWAMKIPKFTPDDNPHGLLEESKFATLFPKYREQYLK 252
+T+ +D+ WAM+ K + LEES FA LFPKYRE YL+
Sbjct: 34 DTDDIDH-WAMEEFKAPNPETHKPFLEESSFALLFPKYREPYLR 76
>UniRef50_Q587A1 Cluster: Ribosomal RNA assembly protein, putative;
n=6; Trypanosomatidae|Rep: Ribosomal RNA assembly
protein, putative - Trypanosoma brucei
Length = 325
Score = 103 bits (247), Expect = 4e-21
Identities = 43/84 (51%), Positives = 61/84 (72%)
Frame = +3
Query: 258 WPLVQKILSEHHIVAELDLIEGSLTVKTTRKTWDPYIIIKARDFMKLLSRSVPFEQASRV 437
WP V+ +L +H + +LDL+EGS+TV TTR+TWDPY I+KARDF++LL+R+VP QA ++
Sbjct: 85 WPAVETVLGQHQLTGKLDLMEGSMTVATTRRTWDPYAIVKARDFIRLLARNVPLAQAQKI 144
Query: 438 LDDEIGCDIIKINSFVRKKETFLK 509
EI CDII I+ + F+K
Sbjct: 145 FQTEITCDIIPISLKGKSTRRFIK 168
Score = 92.3 bits (219), Expect = 1e-17
Identities = 41/71 (57%), Positives = 53/71 (74%)
Frame = +2
Query: 494 RNLFERRQRLIGPQGVTLKSIELLTECYVLVQGNTVSAVGPYKGLVQVRRIVEDTMKNIH 673
R +RR RLIGP+ TLK++E+LT CYVLVQG TV+ +GP KG QVR+IV+D M NIH
Sbjct: 164 RRFIKRRDRLIGPKAQTLKALEILTGCYVLVQGKTVAVMGPVKGCQQVRKIVDDCMNNIH 223
Query: 674 PMYNIKS*WLK 706
P+Y +K +K
Sbjct: 224 PIYGLKQLLIK 234
Score = 35.1 bits (77), Expect = 1.8
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +1
Query: 157 IPKFTPDDNPHGL--LEESKFATLFPKYREQYLKDAGP 264
+P+ T DD P G + E+ FAT FP Y E Y++ P
Sbjct: 49 VPELTQDDVPGGACCVAETTFATQFPSYLESYIRSIWP 86
>UniRef50_Q86E68 Cluster: Clone ZZD933 mRNA sequence; n=1;
Schistosoma japonicum|Rep: Clone ZZD933 mRNA sequence -
Schistosoma japonicum (Blood fluke)
Length = 343
Score = 97.9 bits (233), Expect = 2e-19
Identities = 45/84 (53%), Positives = 65/84 (77%)
Frame = +3
Query: 258 WPLVQKILSEHHIVAELDLIEGSLTVKTTRKTWDPYIIIKARDFMKLLSRSVPFEQASRV 437
WP +++I+ EHHI E++L E ++ V+TT +T+DP+II+KARD ++LL+RSVP EQA RV
Sbjct: 82 WPALKRIMMEHHIRVEINLAESTMEVRTTPRTFDPFIILKARDVIRLLARSVPLEQAVRV 141
Query: 438 LDDEIGCDIIKINSFVRKKETFLK 509
LDDE DII+IN + +E F+K
Sbjct: 142 LDDETFADIIEIN--MTNRERFVK 163
Score = 76.2 bits (179), Expect = 8e-13
Identities = 35/70 (50%), Positives = 49/70 (70%), Gaps = 1/70 (1%)
Frame = +2
Query: 485 SQKRNLFERRQRLIGPQGVTLKSIELLTECYVLVQGNTVSAVGPYKGLVQVRRIVEDTM- 661
+ + +RR RLIG G TLK++EL T CY++VQG TVS VG Y L +VR+IV+ +
Sbjct: 156 TNRERFVKRRNRLIGHDGETLKALELSTNCYIVVQGKTVSVVGRYNDLKEVRKIVQGCIY 215
Query: 662 KNIHPMYNIK 691
+N+HP Y+IK
Sbjct: 216 ENVHPAYSIK 225
Score = 59.7 bits (138), Expect = 7e-08
Identities = 28/62 (45%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Frame = +1
Query: 100 KTNMEVEETNSVDNAWAMKIPKFTPDDNPHG-LLEESKFATLFPKYREQYLKDAGPWYRK 276
K N E+ E+ V+ K PKF P+DNPHG L S + TLFPKYRE+YL + P ++
Sbjct: 28 KKNDEINESQYVEVPKDWKEPKFNPEDNPHGRLFASSSYLTLFPKYREKYLSEIWPALKR 87
Query: 277 YL 282
+
Sbjct: 88 IM 89
>UniRef50_Q7QYA4 Cluster: GLP_387_52551_53537; n=2; Giardia
intestinalis|Rep: GLP_387_52551_53537 - Giardia lamblia
ATCC 50803
Length = 328
Score = 88.6 bits (210), Expect = 1e-16
Identities = 39/82 (47%), Positives = 60/82 (73%)
Frame = +3
Query: 264 LVQKILSEHHIVAELDLIEGSLTVKTTRKTWDPYIIIKARDFMKLLSRSVPFEQASRVLD 443
L + S++ I AELDL +G++TV+TT KTWDP I+ AR+ + +LSRS+ FEQA R +
Sbjct: 74 LANMLSSKYGIAAELDLQKGTITVQTTDKTWDPAAILSARNMIWMLSRSMTFEQAKRCFE 133
Query: 444 DEIGCDIIKINSFVRKKETFLK 509
+E+ CDII+I + +K++F+K
Sbjct: 134 NEVDCDIIRIKNMASRKDSFIK 155
Score = 70.9 bits (166), Expect = 3e-11
Identities = 35/77 (45%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Frame = +2
Query: 479 ICSQKRNLFERRQRLIGPQGVTLKSIELLTECYVLVQGNTVSAVGPYKGLVQVRRIVEDT 658
+ S+K + +RR R +GP TLK+IELLT+ + VQGNTV+ +G +G+ VR IV D
Sbjct: 146 MASRKDSFIKRRARFVGPNAQTLKAIELLTDTKIQVQGNTVAVMGASRGVGLVRNIVTDC 205
Query: 659 M-KNIHPMYNIKS*WLK 706
+ +NIHP+ +IK+ +K
Sbjct: 206 IERNIHPVQHIKTLMIK 222
Score = 42.3 bits (95), Expect = 0.012
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +1
Query: 112 EVEETNSVDNAWAMKIPKFTPDDNPHG-LLEESKFATLFPKYREQYL 249
E + T D + P+F P+DN G LL+ S F+TLFP YRE Y+
Sbjct: 21 ERDMTGRTDVPEGWREPEFRPEDNKSGALLDVSSFSTLFPMYREPYI 67
>UniRef50_A2EWA3 Cluster: Ribosomal RNA assembly protein mis3,
putative; n=1; Trichomonas vaginalis G3|Rep: Ribosomal
RNA assembly protein mis3, putative - Trichomonas
vaginalis G3
Length = 298
Score = 87.0 bits (206), Expect = 4e-16
Identities = 39/73 (53%), Positives = 57/73 (78%), Gaps = 1/73 (1%)
Frame = +2
Query: 506 ERRQRLIGPQGVTLKSIELLTECYVLVQGNTVSAVGPYKGLVQVRRIVEDTMKNIHPMYN 685
+RRQRL+GP G TLK++ELLT+CY+LVQG+TVS +G +G+ ++V D M NIHP+Y+
Sbjct: 125 KRRQRLLGPGGSTLKALELLTQCYILVQGHTVSIIGNIRGINDASKVVVDCMNNIHPVYH 184
Query: 686 IKS*WLK-EIMKD 721
IK +K ++MK+
Sbjct: 185 IKRLMVKRDLMKN 197
Score = 75.8 bits (178), Expect = 1e-12
Identities = 36/84 (42%), Positives = 53/84 (63%)
Frame = +3
Query: 258 WPLVQKILSEHHIVAELDLIEGSLTVKTTRKTWDPYIIIKARDFMKLLSRSVPFEQASRV 437
W +Q + + I E+D G++++KTT KTWDP I+ ARD +KL++RSVP EQA RV
Sbjct: 42 WKKIQDKMDSYGINIEVDYKNGNISLKTTDKTWDPVAILNARDAIKLVARSVPIEQAFRV 101
Query: 438 LDDEIGCDIIKINSFVRKKETFLK 509
++ +II I +R +E F K
Sbjct: 102 FEEGTESNIIIIGKHIRNQERFNK 125
Score = 37.5 bits (83), Expect = 0.33
Identities = 17/30 (56%), Positives = 19/30 (63%)
Frame = +1
Query: 166 FTPDDNPHGLLEESKFATLFPKYREQYLKD 255
F D + LLEES F LFP YRE+YL D
Sbjct: 11 FQKGDMKYKLLEESSFKVLFPHYREKYLTD 40
>UniRef50_Q8SVW2 Cluster: Putative uncharacterized protein
ECU04_0510; n=1; Encephalitozoon cuniculi|Rep: Putative
uncharacterized protein ECU04_0510 - Encephalitozoon
cuniculi
Length = 283
Score = 84.2 bits (199), Expect = 3e-15
Identities = 35/62 (56%), Positives = 49/62 (79%)
Frame = +2
Query: 506 ERRQRLIGPQGVTLKSIELLTECYVLVQGNTVSAVGPYKGLVQVRRIVEDTMKNIHPMYN 685
+RR RL+GP+ +TLK+I++LT CYVLV G TVS +G ++G+ + ++IV D M NIHPMY
Sbjct: 121 KRRDRLVGPKEMTLKAIQILTRCYVLVHGKTVSIIGGFRGVEEAKKIVVDCMNNIHPMYQ 180
Query: 686 IK 691
IK
Sbjct: 181 IK 182
Score = 62.1 bits (144), Expect = 1e-08
Identities = 32/87 (36%), Positives = 48/87 (55%)
Frame = +3
Query: 249 ERCWPLVQKILSEHHIVAELDLIEGSLTVKTTRKTWDPYIIIKARDFMKLLSRSVPFEQA 428
E+ + + L I +DL + + V T R T DP+I IKA +F+KL+ R V E+A
Sbjct: 35 EQTQKYIVRALEAKKISCRIDLEKRVIDVMTNRSTRDPFIFIKAVNFVKLVGRGVGIEEA 94
Query: 429 SRVLDDEIGCDIIKINSFVRKKETFLK 509
+VL+DE C++I I V + F K
Sbjct: 95 MKVLEDEYFCEVIDIKKMVSSDKVFEK 121
Score = 33.5 bits (73), Expect = 5.4
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +1
Query: 163 KFTPDDNPHGLLEESKFATLFPKYREQYLK 252
KF+ D H E S A +FPKYRE+Y++
Sbjct: 6 KFSDGDFKHEFAEMSSEAVMFPKYREKYIE 35
>UniRef50_Q9AW78 Cluster: Rev interacting protein Rip-1-like
protein; n=1; Guillardia theta|Rep: Rev interacting
protein Rip-1-like protein - Guillardia theta
(Cryptomonas phi)
Length = 262
Score = 76.6 bits (180), Expect = 6e-13
Identities = 34/80 (42%), Positives = 58/80 (72%), Gaps = 1/80 (1%)
Frame = +2
Query: 485 SQKRNLFERRQRLIGPQGVTLKSIELLTECYVLVQGNTVSAVGPYKGLVQVRRIVEDTMK 664
S +++ ++R+RLIG GVT+K+IELLT+CY+L+QGNTV+ +G ++ L I+ +M
Sbjct: 122 SSRQSFLKKRKRLIGNNGVTVKTIELLTKCYILIQGNTVACMGKFRDLKWCINIITKSMT 181
Query: 665 NIHPMYNIKS*WL-KEIMKD 721
N HP++ +K+ + K++M D
Sbjct: 182 NNHPIFYLKNIQIKKKLMND 201
Score = 75.8 bits (178), Expect = 1e-12
Identities = 33/84 (39%), Positives = 55/84 (65%)
Frame = +3
Query: 258 WPLVQKILSEHHIVAELDLIEGSLTVKTTRKTWDPYIIIKARDFMKLLSRSVPFEQASRV 437
W ++ +I+ IV +++ G + + + K +DPY IIKA+DF+ L+ R VP QAS++
Sbjct: 46 WHIINRIMKIRSIVVTINVNLGLVEIMNSLKGFDPYSIIKAKDFITLVCRGVPIFQASKI 105
Query: 438 LDDEIGCDIIKINSFVRKKETFLK 509
D+I C+IIKI+ F +++FLK
Sbjct: 106 FKDDIFCEIIKISKFTSSRQSFLK 129
>UniRef50_Q6L2G6 Cluster: Putative RNA-binding protein; n=1;
Picrophilus torridus|Rep: Putative RNA-binding protein -
Picrophilus torridus
Length = 186
Score = 43.2 bits (97), Expect = 0.007
Identities = 23/59 (38%), Positives = 32/59 (54%)
Frame = +2
Query: 476 FICSQKRNLFERRQRLIGPQGVTLKSIELLTECYVLVQGNTVSAVGPYKGLVQVRRIVE 652
F + + E R R+IG G T + IE LT Y+ V GNTVS +G + G+ + VE
Sbjct: 96 FAGNNSNRINELRGRVIGRNGRTRQIIEELTNTYISVSGNTVSIIGDFIGIGYSKEAVE 154
>UniRef50_A7D0D1 Cluster: KH, type 1, domain protein; n=6;
Euryarchaeota|Rep: KH, type 1, domain protein -
Halorubrum lacusprofundi ATCC 49239
Length = 180
Score = 37.1 bits (82), Expect = 0.44
Identities = 22/51 (43%), Positives = 31/51 (60%)
Frame = +2
Query: 497 NLFERRQRLIGPQGVTLKSIELLTECYVLVQGNTVSAVGPYKGLVQVRRIV 649
+L ++ R+IG G T + IE L+ V+V G+TV AVG + L VRR V
Sbjct: 97 DLQRKKGRIIGENGRTRELIEELSGANVVVYGSTVGAVGQPEELEVVRRAV 147
>UniRef50_Q57885 Cluster: KH domain-containing protein MJ0443; n=6;
Methanococcales|Rep: KH domain-containing protein MJ0443
- Methanococcus jannaschii
Length = 227
Score = 37.1 bits (82), Expect = 0.44
Identities = 21/69 (30%), Positives = 37/69 (53%)
Frame = +3
Query: 276 ILSEHHIVAELDLIEGSLTVKTTRKTWDPYIIIKARDFMKLLSRSVPFEQASRVLDDEIG 455
I E + E+D +G++T+ T K DP + KARD ++ + R E A +++ DE
Sbjct: 40 IEKELGVKLEIDA-DGTVTIYGTDKQKDPLAVWKARDIVRAIGRGFNPEIALKLVSDEYV 98
Query: 456 CDIIKINSF 482
++I I +
Sbjct: 99 LEVIDIEDY 107
>UniRef50_Q2NEN8 Cluster: Predicted RNA-binding protein; n=3;
Methanobacteriaceae|Rep: Predicted RNA-binding protein -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 233
Score = 35.9 bits (79), Expect = 1.0
Identities = 20/73 (27%), Positives = 39/73 (53%)
Frame = +3
Query: 303 ELDLIEGSLTVKTTRKTWDPYIIIKARDFMKLLSRSVPFEQASRVLDDEIGCDIIKINSF 482
++D G++ + +T +T DP I KAR +K + R + A + +D++ +II + +
Sbjct: 37 KIDSDTGNIAISSTDETDDPLAIWKARYMIKAIGRGFNPDIALTLENDDLILEIINLQDY 96
Query: 483 VRKKETFLKDGRG 521
V K + L +G
Sbjct: 97 VGKSKKALVRQKG 109
Score = 32.7 bits (71), Expect = 9.4
Identities = 14/59 (23%), Positives = 30/59 (50%)
Frame = +2
Query: 476 FICSQKRNLFERRQRLIGPQGVTLKSIELLTECYVLVQGNTVSAVGPYKGLVQVRRIVE 652
++ K+ L ++ R+IG G T + + + + + + G TVS +G + + R +E
Sbjct: 96 YVGKSKKALVRQKGRIIGKNGRTRQIMHDMLDVEISIYGKTVSLIGEIENIQMAREAIE 154
>UniRef50_Q9V136 Cluster: Predicted RNA-binding protein; n=4;
Thermococcaceae|Rep: Predicted RNA-binding protein -
Pyrococcus abyssi
Length = 221
Score = 35.5 bits (78), Expect = 1.3
Identities = 17/60 (28%), Positives = 34/60 (56%)
Frame = +3
Query: 306 LDLIEGSLTVKTTRKTWDPYIIIKARDFMKLLSRSVPFEQASRVLDDEIGCDIIKINSFV 485
+D G + + +T++T DP + KARD ++ + R E+A R+L++ +II + +
Sbjct: 71 VDSETGEVWITSTKETDDPLAVWKARDIVQAIGRGFSPERAFRLLNEGEYLEIINLTDII 130
>UniRef50_Q3LWA8 Cluster: Putative uncharacterized protein; n=1;
Bigelowiella natans|Rep: Putative uncharacterized
protein - Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 153
Score = 34.7 bits (76), Expect = 2.3
Identities = 17/73 (23%), Positives = 35/73 (47%)
Frame = +3
Query: 258 WPLVQKILSEHHIVAELDLIEGSLTVKTTRKTWDPYIIIKARDFMKLLSRSVPFEQASRV 437
W + K+ + + + + + P I+ K F++L++R+VP+ Q+ ++
Sbjct: 24 WNRISKLFKSMQLNIIFEQSRRLIIISNQKNCIVPTILFKGLMFIRLVNRNVPYMQSKKI 83
Query: 438 LDDEIGCDIIKIN 476
+D IIKIN
Sbjct: 84 FNDSHIGTIIKIN 96
>UniRef50_Q1VRF0 Cluster: Putative uncharacterized protein; n=1;
Psychroflexus torquis ATCC 700755|Rep: Putative
uncharacterized protein - Psychroflexus torquis ATCC
700755
Length = 901
Score = 34.3 bits (75), Expect = 3.1
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Frame = -2
Query: 541 NTLRSYQPLPSFKKVSFLRTNELILIMSHPISSSSTREACSNGTLLDNSF---MKSRALI 371
N SY P SF + +++ L ++S IS+S+ E+ + GTL DN++ +K+ LI
Sbjct: 149 NKQLSY-PFKSFSIIDYIKEGTLAEVLSFSISNSNLCESLTFGTLADNAYSILLKTNTLI 207
Query: 370 I 368
+
Sbjct: 208 L 208
>UniRef50_Q9FKT4 Cluster: RNA-binding protein-like; n=17;
Magnoliophyta|Rep: RNA-binding protein-like -
Arabidopsis thaliana (Mouse-ear cress)
Length = 315
Score = 33.9 bits (74), Expect = 4.1
Identities = 13/25 (52%), Positives = 20/25 (80%)
Frame = +2
Query: 518 RLIGPQGVTLKSIELLTECYVLVQG 592
RL+GP+G +LK +E T+C VL++G
Sbjct: 185 RLLGPRGNSLKRVEASTDCRVLIRG 209
>UniRef50_A7T5W9 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 144
Score = 33.9 bits (74), Expect = 4.1
Identities = 14/25 (56%), Positives = 20/25 (80%)
Frame = +2
Query: 518 RLIGPQGVTLKSIELLTECYVLVQG 592
R+IGP+G+TL+ IE T C +LV+G
Sbjct: 111 RVIGPRGMTLREIESTTGCKLLVRG 135
>UniRef50_UPI000065DAE4 Cluster: Homolog of Homo sapiens "PREDICTED
"similar to matrilin 2 precursor; n=4; Euteleostomi|Rep:
Homolog of Homo sapiens "PREDICTED "similar to matrilin
2 precursor - Takifugu rubripes
Length = 842
Score = 33.1 bits (72), Expect = 7.1
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +3
Query: 366 IIIKARDFMKL-LSRSVPFEQASRVLDDEIGCDIIKINSFVRKKETFL 506
+I + +FMK+ S SVP + + DD C I+KIN VR F+
Sbjct: 182 VIKEIVNFMKISFSESVPRKSVPQEGDDHFNCAILKINDMVRSHGCFV 229
>UniRef50_Q8W574 Cluster: At1g09660/F21M12_5; n=8;
Magnoliophyta|Rep: At1g09660/F21M12_5 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 298
Score = 33.1 bits (72), Expect = 7.1
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +2
Query: 518 RLIGPQGVTLKSIELLTECYVLVQG 592
R++GP+G +LK +EL T C V ++G
Sbjct: 166 RILGPRGNSLKRVELATHCRVFIRG 190
>UniRef50_Q5CLV8 Cluster: Putative uncharacterized protein; n=2;
Cryptosporidium|Rep: Putative uncharacterized protein -
Cryptosporidium hominis
Length = 1490
Score = 33.1 bits (72), Expect = 7.1
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +1
Query: 139 NAWAMKIPKFTPDDNPHGLLEESKFATLFPKYREQYLKDAGPWYR 273
N+W++ +P + D + L+ ++ T FPK Y K+AG W+R
Sbjct: 633 NSWSLNVPSGSYDKSKVALIVQNLTDTNFPKIFGTY-KNAGSWFR 676
>UniRef50_O45180 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 254
Score = 33.1 bits (72), Expect = 7.1
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +2
Query: 518 RLIGPQGVTLKSIELLTECYVLVQGN 595
R+IGP+G T K +E T C ++++GN
Sbjct: 140 RIIGPRGTTAKQLEKDTGCRIMIRGN 165
>UniRef50_Q979F9 Cluster: Putative uncharacterized protein
TVG1231911; n=4; Thermoplasmatales|Rep: Putative
uncharacterized protein TVG1231911 - Thermoplasma
volcanium
Length = 182
Score = 33.1 bits (72), Expect = 7.1
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +2
Query: 512 RQRLIGPQGVTLKSIELLTECYVLVQGNTVSAVGPY 619
+ R+IG G T IE LT Y+ V G+T+S +G Y
Sbjct: 104 KARVIGTGGKTRAIIEELTGSYLSVYGDTISIIGDY 139
>UniRef50_Q8I4C4 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 380
Score = 32.7 bits (71), Expect = 9.4
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +2
Query: 518 RLIGPQGVTLKSIELLTECYVLVQGNT 598
RL+GP+G T K +E+ T C + + G T
Sbjct: 131 RLLGPRGTTAKQLEVTTGCRITILGRT 157
>UniRef50_Q4DJ36 Cluster: Putative uncharacterized protein; n=2;
Trypanosoma cruzi|Rep: Putative uncharacterized protein
- Trypanosoma cruzi
Length = 869
Score = 32.7 bits (71), Expect = 9.4
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = +2
Query: 512 RQRLIGPQGVTLKSIELLTECYVLVQGNTVSAVGPYKGLVQVRRIVEDTMKNIH 673
R LIG +G L+ IEL + + V+ + V+ G K + R +VE +K H
Sbjct: 418 RTHLIGKRGTNLRRIELESGAKLDVERDAVTLRGTQKAVEAARELVETFLKGQH 471
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 608,967,224
Number of Sequences: 1657284
Number of extensions: 11274581
Number of successful extensions: 29110
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 28353
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29107
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 58677691418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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