Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30835
         (722 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    23   1.9  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    23   1.9  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    23   1.9  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    23   2.5  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    22   4.4  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   7.6  

>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = +2

Query: 161 PNLHPTTTRMAF*KKVNSPHYFQSIESNT*KMLALGTENT*RTS 292
           P   PTT+  +  +  N       + SNT  ML+L   NT RT+
Sbjct: 216 PAEFPTTSSSSALESPNPASRSSCLGSNTSSMLSLNCLNTGRTN 259


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = +2

Query: 161 PNLHPTTTRMAF*KKVNSPHYFQSIESNT*KMLALGTENT*RTS 292
           P   PTT+  +  +  N       + SNT  ML+L   NT RT+
Sbjct: 5   PAEFPTTSSSSALESPNPASRSSCLGSNTSSMLSLNCLNTGRTN 48


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = +2

Query: 161 PNLHPTTTRMAF*KKVNSPHYFQSIESNT*KMLALGTENT*RTS 292
           P   PTT+  +  +  N       + SNT  ML+L   NT RT+
Sbjct: 5   PAEFPTTSSSSALESPNPASRSSCLGSNTSSMLSLNCLNTGRTN 48


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -1

Query: 692 FLYCT*DVYFSLCLQQFVLLALN 624
           F Y   ++ F LCL  F LL +N
Sbjct: 191 FTYMPYNIVFGLCLTTFGLLPVN 213


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 13/45 (28%), Positives = 20/45 (44%)
 Frame = -2

Query: 529 SYQPLPSFKKVSFLRTNELILIMSHPISSSSTREACSNGTLLDNS 395
           S  PLPS+      +  + I IMS+   ++   +   N  L  NS
Sbjct: 178 SANPLPSYDIPEINKVVDFINIMSYDYHTADQPQTGLNAPLYGNS 222


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -2

Query: 700 PLTFYIVHRMYIFHCVFNNSSYL 632
           PLT  I H  Y  H ++ +S+ +
Sbjct: 337 PLTHNIAHNPYPSHSIYPSSNLM 359


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,183
Number of Sequences: 336
Number of extensions: 3199
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)