Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30835
(722 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF010919-1|ABJ97679.1| 324|Homo sapiens HRB2 variant B protein. 136 6e-32
U55766-1|AAB00557.1| 288|Homo sapiens Rev interacting protein R... 134 2e-31
BC033887-1|AAH33887.1| 381|Homo sapiens KRR1, small subunit (SS... 134 2e-31
BC026107-1|AAH26107.1| 381|Homo sapiens KRR1, small subunit (SS... 134 2e-31
BC005225-1|AAH05225.1| 362|Homo sapiens Unknown (protein for IM... 134 2e-31
BC016778-1|AAH16778.1| 381|Homo sapiens KRR1, small subunit (SS... 134 4e-31
DQ323998-1|ABC88600.1| 333|Homo sapiens QKI protein. 31 3.2
BC019917-1|AAH19917.1| 341|Homo sapiens quaking homolog, KH dom... 31 3.2
BC012222-1|AAH12222.1| 293|Homo sapiens QKI protein protein. 31 3.2
AY780788-1|AAV98358.1| 313|Homo sapiens quaking isoform protein. 31 3.2
AL356119-3|CAI23024.1| 325|Homo sapiens quaking homolog, KH dom... 31 3.2
AL356119-2|CAI23023.1| 319|Homo sapiens quaking homolog, KH dom... 31 3.2
AL356119-1|CAI23022.1| 341|Homo sapiens quaking homolog, KH dom... 31 3.2
AL031781-3|CAI21653.1| 325|Homo sapiens quaking homolog, KH dom... 31 3.2
AL031781-2|CAI21652.1| 319|Homo sapiens quaking homolog, KH dom... 31 3.2
AL031781-1|CAI21651.1| 341|Homo sapiens quaking homolog, KH dom... 31 3.2
AK027309-1|BAB55032.1| 323|Homo sapiens protein ( Homo sapiens ... 31 3.2
AF142422-1|AAF63417.1| 341|Homo sapiens QUAKING isoform 3 protein. 31 3.2
AF142421-1|AAF63416.1| 337|Homo sapiens QUAKING isoform 5 protein. 31 3.2
AF142420-1|AAF63415.1| 315|Homo sapiens QUAKING isoform 4 protein. 31 3.2
AF142419-1|AAF63414.1| 363|Homo sapiens QUAKING isoform 6 protein. 31 3.2
AF142418-1|AAF63413.1| 347|Homo sapiens QUAKING isoform 2 protein. 31 3.2
AF142417-1|AAF63412.1| 321|Homo sapiens QUAKING isoform 1 protein. 31 3.2
AB067808-1|BAB69681.1| 325|Homo sapiens RNA binding protein HQK... 31 3.2
AB067801-1|BAB69499.1| 319|Homo sapiens RNA binding protein HQK... 31 3.2
AB067800-1|BAB69498.1| 325|Homo sapiens RNA binding protein HQK... 31 3.2
AB067799-1|BAB69497.1| 319|Homo sapiens RNA binding protein HQK... 31 3.2
AB067798-1|BAB69496.1| 341|Homo sapiens RNA binding protein HQK... 31 3.2
BC062318-1|AAH62318.1| 559|Homo sapiens LAMA1 protein protein. 31 5.5
BC039051-1|AAH39051.1| 747|Homo sapiens LAMA1 protein protein. 31 5.5
>EF010919-1|ABJ97679.1| 324|Homo sapiens HRB2 variant B protein.
Length = 324
Score = 136 bits (330), Expect = 6e-32
Identities = 63/100 (63%), Positives = 78/100 (78%)
Frame = +3
Query: 219 IISKVSRAIPERCWPLVQKILSEHHIVAELDLIEGSLTVKTTRKTWDPYIIIKARDFMKL 398
+ K A + CWPLVQK L+EHH+ A LDLIEGS+TV TT+KT+DPYIII+ARD +KL
Sbjct: 63 LFPKYREAYLKECWPLVQKALNEHHVNATLDLIEGSMTVCTTKKTFDPYIIIRARDLIKL 122
Query: 399 LSRSVPFEQASRVLDDEIGCDIIKINSFVRKKETFLKDGR 518
L+RSV FEQA R+L D++ CDIIKI S VR KE F+K G+
Sbjct: 123 LARSVSFEQAVRILQDDVACDIIKIGSLVRNKERFVKRGQ 162
Score = 104 bits (250), Expect = 3e-22
Identities = 44/67 (65%), Positives = 57/67 (85%)
Frame = +2
Query: 491 KRNLFERRQRLIGPQGVTLKSIELLTECYVLVQGNTVSAVGPYKGLVQVRRIVEDTMKNI 670
K +R QRL+GP+G TLK++ELLT CY++VQGNTVSA+GP+ GL +VR++V DTMKNI
Sbjct: 154 KERFVKRGQRLVGPKGSTLKALELLTNCYIMVQGNTVSAIGPFSGLKEVRKVVLDTMKNI 213
Query: 671 HPMYNIK 691
HP+YNIK
Sbjct: 214 HPIYNIK 220
Score = 66.1 bits (154), Expect = 1e-10
Identities = 32/59 (54%), Positives = 39/59 (66%)
Frame = +1
Query: 106 NMEVEETNSVDNAWAMKIPKFTPDDNPHGLLEESKFATLFPKYREQYLKDAGPWYRKYL 282
N + E +V + W K P F+ +DNP GLLEES FATLFPKYRE YLK+ P +K L
Sbjct: 27 NQDESELLTVPDGW--KEPAFSKEDNPRGLLEESSFATLFPKYREAYLKECWPLVQKAL 83
>U55766-1|AAB00557.1| 288|Homo sapiens Rev interacting protein
Rip-1 protein.
Length = 288
Score = 134 bits (325), Expect = 2e-31
Identities = 62/97 (63%), Positives = 76/97 (78%)
Frame = +3
Query: 219 IISKVSRAIPERCWPLVQKILSEHHIVAELDLIEGSLTVKTTRKTWDPYIIIKARDFMKL 398
+ K A + CWPLVQK L+EHH+ A LDLIEGS+TV TT+KT+DPYIII+ARD +KL
Sbjct: 63 LFPKYREAYLKECWPLVQKALNEHHVNATLDLIEGSMTVCTTKKTFDPYIIIRARDLIKL 122
Query: 399 LSRSVPFEQASRVLDDEIGCDIIKINSFVRKKETFLK 509
L+RSV FEQA R+L D++ CDIIKI S VR KE F+K
Sbjct: 123 LARSVSFEQAVRILQDDVACDIIKIGSLVRNKERFVK 159
Score = 112 bits (270), Expect = 1e-24
Identities = 51/78 (65%), Positives = 65/78 (83%), Gaps = 1/78 (1%)
Frame = +2
Query: 491 KRNLFERRQRLIGPQGVTLKSIELLTECYVLVQGNTVSAVGPYKGLVQVRRIVEDTMKNI 670
K +RRQRLIGP+G TLK++ELLT CY++VQGNTVSA+GP+ GL +VR++V DTMKNI
Sbjct: 154 KERFVKRRQRLIGPKGSTLKALELLTNCYIMVQGNTVSAIGPFSGLKEVRKVVLDTMKNI 213
Query: 671 HPMYNIKS*WLK-EIMKD 721
HP+YNIKS +K E+ KD
Sbjct: 214 HPIYNIKSLMIKRELAKD 231
Score = 66.1 bits (154), Expect = 1e-10
Identities = 32/59 (54%), Positives = 39/59 (66%)
Frame = +1
Query: 106 NMEVEETNSVDNAWAMKIPKFTPDDNPHGLLEESKFATLFPKYREQYLKDAGPWYRKYL 282
N + E +V + W K P F+ +DNP GLLEES FATLFPKYRE YLK+ P +K L
Sbjct: 27 NQDESELLTVPDGW--KEPAFSKEDNPRGLLEESSFATLFPKYREAYLKECWPLVQKAL 83
>BC033887-1|AAH33887.1| 381|Homo sapiens KRR1, small subunit (SSU)
processome component, homolog (yeast) protein.
Length = 381
Score = 134 bits (325), Expect = 2e-31
Identities = 62/97 (63%), Positives = 76/97 (78%)
Frame = +3
Query: 219 IISKVSRAIPERCWPLVQKILSEHHIVAELDLIEGSLTVKTTRKTWDPYIIIKARDFMKL 398
+ K A + CWPLVQK L+EHH+ A LDLIEGS+TV TT+KT+DPYIII+ARD +KL
Sbjct: 63 LFPKYREAYLKECWPLVQKALNEHHVNATLDLIEGSMTVCTTKKTFDPYIIIRARDLIKL 122
Query: 399 LSRSVPFEQASRVLDDEIGCDIIKINSFVRKKETFLK 509
L+RSV FEQA R+L D++ CDIIKI S VR KE F+K
Sbjct: 123 LARSVSFEQAVRILQDDVACDIIKIGSLVRNKERFVK 159
Score = 112 bits (270), Expect = 1e-24
Identities = 51/78 (65%), Positives = 65/78 (83%), Gaps = 1/78 (1%)
Frame = +2
Query: 491 KRNLFERRQRLIGPQGVTLKSIELLTECYVLVQGNTVSAVGPYKGLVQVRRIVEDTMKNI 670
K +RRQRLIGP+G TLK++ELLT CY++VQGNTVSA+GP+ GL +VR++V DTMKNI
Sbjct: 154 KERFVKRRQRLIGPKGSTLKALELLTNCYIMVQGNTVSAIGPFSGLKEVRKVVLDTMKNI 213
Query: 671 HPMYNIKS*WLK-EIMKD 721
HP+YNIKS +K E+ KD
Sbjct: 214 HPIYNIKSLMIKRELAKD 231
Score = 66.1 bits (154), Expect = 1e-10
Identities = 32/59 (54%), Positives = 39/59 (66%)
Frame = +1
Query: 106 NMEVEETNSVDNAWAMKIPKFTPDDNPHGLLEESKFATLFPKYREQYLKDAGPWYRKYL 282
N + E +V + W K P F+ +DNP GLLEES FATLFPKYRE YLK+ P +K L
Sbjct: 27 NQDESELLTVPDGW--KEPAFSKEDNPRGLLEESSFATLFPKYREAYLKECWPLVQKAL 83
>BC026107-1|AAH26107.1| 381|Homo sapiens KRR1, small subunit (SSU)
processome component, homolog (yeast) protein.
Length = 381
Score = 134 bits (325), Expect = 2e-31
Identities = 62/97 (63%), Positives = 76/97 (78%)
Frame = +3
Query: 219 IISKVSRAIPERCWPLVQKILSEHHIVAELDLIEGSLTVKTTRKTWDPYIIIKARDFMKL 398
+ K A + CWPLVQK L+EHH+ A LDLIEGS+TV TT+KT+DPYIII+ARD +KL
Sbjct: 63 LFPKYREAYLKECWPLVQKALNEHHVNATLDLIEGSMTVCTTKKTFDPYIIIRARDLIKL 122
Query: 399 LSRSVPFEQASRVLDDEIGCDIIKINSFVRKKETFLK 509
L+RSV FEQA R+L D++ CDIIKI S VR KE F+K
Sbjct: 123 LARSVSFEQAVRILQDDVACDIIKIGSLVRNKERFVK 159
Score = 111 bits (266), Expect = 3e-24
Identities = 50/78 (64%), Positives = 64/78 (82%), Gaps = 1/78 (1%)
Frame = +2
Query: 491 KRNLFERRQRLIGPQGVTLKSIELLTECYVLVQGNTVSAVGPYKGLVQVRRIVEDTMKNI 670
K +RRQRLIGP+G TLK++ELLT CY++VQGNTVSA+GP+ GL +VR++ DTMKNI
Sbjct: 154 KERFVKRRQRLIGPKGSTLKALELLTNCYIMVQGNTVSAIGPFSGLKEVRKVALDTMKNI 213
Query: 671 HPMYNIKS*WLK-EIMKD 721
HP+YNIKS +K E+ KD
Sbjct: 214 HPIYNIKSLMIKRELAKD 231
Score = 66.1 bits (154), Expect = 1e-10
Identities = 32/59 (54%), Positives = 39/59 (66%)
Frame = +1
Query: 106 NMEVEETNSVDNAWAMKIPKFTPDDNPHGLLEESKFATLFPKYREQYLKDAGPWYRKYL 282
N + E +V + W K P F+ +DNP GLLEES FATLFPKYRE YLK+ P +K L
Sbjct: 27 NQDESELLTVPDGW--KEPAFSKEDNPRGLLEESSFATLFPKYREAYLKECWPLVQKAL 83
>BC005225-1|AAH05225.1| 362|Homo sapiens Unknown (protein for
IMAGE:3685682) protein.
Length = 362
Score = 134 bits (325), Expect = 2e-31
Identities = 62/97 (63%), Positives = 76/97 (78%)
Frame = +3
Query: 219 IISKVSRAIPERCWPLVQKILSEHHIVAELDLIEGSLTVKTTRKTWDPYIIIKARDFMKL 398
+ K A + CWPLVQK L+EHH+ A LDLIEGS+TV TT+KT+DPYIII+ARD +KL
Sbjct: 63 LFPKYREAYLKECWPLVQKALNEHHVNATLDLIEGSMTVCTTKKTFDPYIIIRARDLIKL 122
Query: 399 LSRSVPFEQASRVLDDEIGCDIIKINSFVRKKETFLK 509
L+RSV FEQA R+L D++ CDIIKI S VR KE F+K
Sbjct: 123 LARSVSFEQAVRILQDDVACDIIKIGSLVRNKERFVK 159
Score = 112 bits (270), Expect = 1e-24
Identities = 51/78 (65%), Positives = 65/78 (83%), Gaps = 1/78 (1%)
Frame = +2
Query: 491 KRNLFERRQRLIGPQGVTLKSIELLTECYVLVQGNTVSAVGPYKGLVQVRRIVEDTMKNI 670
K +RRQRLIGP+G TLK++ELLT CY++VQGNTVSA+GP+ GL +VR++V DTMKNI
Sbjct: 154 KERFVKRRQRLIGPKGSTLKALELLTNCYIMVQGNTVSAIGPFSGLKEVRKVVLDTMKNI 213
Query: 671 HPMYNIKS*WLK-EIMKD 721
HP+YNIKS +K E+ KD
Sbjct: 214 HPIYNIKSLMIKRELAKD 231
Score = 66.1 bits (154), Expect = 1e-10
Identities = 32/59 (54%), Positives = 39/59 (66%)
Frame = +1
Query: 106 NMEVEETNSVDNAWAMKIPKFTPDDNPHGLLEESKFATLFPKYREQYLKDAGPWYRKYL 282
N + E +V + W K P F+ +DNP GLLEES FATLFPKYRE YLK+ P +K L
Sbjct: 27 NQDESELLTVPDGW--KEPAFSKEDNPRGLLEESSFATLFPKYREAYLKECWPLVQKAL 83
>BC016778-1|AAH16778.1| 381|Homo sapiens KRR1, small subunit (SSU)
processome component, homolog (yeast) protein.
Length = 381
Score = 134 bits (323), Expect = 4e-31
Identities = 62/97 (63%), Positives = 76/97 (78%)
Frame = +3
Query: 219 IISKVSRAIPERCWPLVQKILSEHHIVAELDLIEGSLTVKTTRKTWDPYIIIKARDFMKL 398
+ K A + CWPLVQK L+EHH+ A LDLIEGS+TV TT+KT+DPYIII+ARD +KL
Sbjct: 63 LFPKYRGAYLKECWPLVQKALNEHHVNATLDLIEGSMTVCTTKKTFDPYIIIRARDLIKL 122
Query: 399 LSRSVPFEQASRVLDDEIGCDIIKINSFVRKKETFLK 509
L+RSV FEQA R+L D++ CDIIKI S VR KE F+K
Sbjct: 123 LARSVSFEQAVRILQDDVACDIIKIGSLVRNKERFVK 159
Score = 112 bits (270), Expect = 1e-24
Identities = 51/78 (65%), Positives = 65/78 (83%), Gaps = 1/78 (1%)
Frame = +2
Query: 491 KRNLFERRQRLIGPQGVTLKSIELLTECYVLVQGNTVSAVGPYKGLVQVRRIVEDTMKNI 670
K +RRQRLIGP+G TLK++ELLT CY++VQGNTVSA+GP+ GL +VR++V DTMKNI
Sbjct: 154 KERFVKRRQRLIGPKGSTLKALELLTNCYIMVQGNTVSAIGPFSGLKEVRKVVLDTMKNI 213
Query: 671 HPMYNIKS*WLK-EIMKD 721
HP+YNIKS +K E+ KD
Sbjct: 214 HPIYNIKSLMIKRELAKD 231
Score = 63.3 bits (147), Expect = 8e-10
Identities = 31/59 (52%), Positives = 38/59 (64%)
Frame = +1
Query: 106 NMEVEETNSVDNAWAMKIPKFTPDDNPHGLLEESKFATLFPKYREQYLKDAGPWYRKYL 282
N + E +V + W K P F+ +DNP GLLEES FATLFPKYR YLK+ P +K L
Sbjct: 27 NQDESELLTVPDGW--KEPAFSKEDNPRGLLEESSFATLFPKYRGAYLKECWPLVQKAL 83
>DQ323998-1|ABC88600.1| 333|Homo sapiens QKI protein.
Length = 333
Score = 31.5 bits (68), Expect = 3.2
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +2
Query: 518 RLIGPQGVTLKSIELLTECYVLVQG 592
R++GP+G+T K +E T C ++V+G
Sbjct: 101 RILGPRGLTAKQLEAETGCKIMVRG 125
>BC019917-1|AAH19917.1| 341|Homo sapiens quaking homolog, KH domain
RNA binding (mouse) protein.
Length = 341
Score = 31.5 bits (68), Expect = 3.2
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +2
Query: 518 RLIGPQGVTLKSIELLTECYVLVQG 592
R++GP+G+T K +E T C ++V+G
Sbjct: 101 RILGPRGLTAKQLEAETGCKIMVRG 125
>BC012222-1|AAH12222.1| 293|Homo sapiens QKI protein protein.
Length = 293
Score = 31.5 bits (68), Expect = 3.2
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +2
Query: 518 RLIGPQGVTLKSIELLTECYVLVQG 592
R++GP+G+T K +E T C ++V+G
Sbjct: 53 RILGPRGLTAKQLEAETGCKIMVRG 77
>AY780788-1|AAV98358.1| 313|Homo sapiens quaking isoform protein.
Length = 313
Score = 31.5 bits (68), Expect = 3.2
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +2
Query: 518 RLIGPQGVTLKSIELLTECYVLVQG 592
R++GP+G+T K +E T C ++V+G
Sbjct: 97 RILGPRGLTAKQLEAETGCKIMVRG 121
>AL356119-3|CAI23024.1| 325|Homo sapiens quaking homolog, KH domain
RNA binding (mouse) protein.
Length = 325
Score = 31.5 bits (68), Expect = 3.2
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +2
Query: 518 RLIGPQGVTLKSIELLTECYVLVQG 592
R++GP+G+T K +E T C ++V+G
Sbjct: 101 RILGPRGLTAKQLEAETGCKIMVRG 125
>AL356119-2|CAI23023.1| 319|Homo sapiens quaking homolog, KH domain
RNA binding (mouse) protein.
Length = 319
Score = 31.5 bits (68), Expect = 3.2
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +2
Query: 518 RLIGPQGVTLKSIELLTECYVLVQG 592
R++GP+G+T K +E T C ++V+G
Sbjct: 101 RILGPRGLTAKQLEAETGCKIMVRG 125
>AL356119-1|CAI23022.1| 341|Homo sapiens quaking homolog, KH domain
RNA binding (mouse) protein.
Length = 341
Score = 31.5 bits (68), Expect = 3.2
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +2
Query: 518 RLIGPQGVTLKSIELLTECYVLVQG 592
R++GP+G+T K +E T C ++V+G
Sbjct: 101 RILGPRGLTAKQLEAETGCKIMVRG 125
>AL031781-3|CAI21653.1| 325|Homo sapiens quaking homolog, KH domain
RNA binding (mouse) protein.
Length = 325
Score = 31.5 bits (68), Expect = 3.2
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +2
Query: 518 RLIGPQGVTLKSIELLTECYVLVQG 592
R++GP+G+T K +E T C ++V+G
Sbjct: 101 RILGPRGLTAKQLEAETGCKIMVRG 125
>AL031781-2|CAI21652.1| 319|Homo sapiens quaking homolog, KH domain
RNA binding (mouse) protein.
Length = 319
Score = 31.5 bits (68), Expect = 3.2
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +2
Query: 518 RLIGPQGVTLKSIELLTECYVLVQG 592
R++GP+G+T K +E T C ++V+G
Sbjct: 101 RILGPRGLTAKQLEAETGCKIMVRG 125
>AL031781-1|CAI21651.1| 341|Homo sapiens quaking homolog, KH domain
RNA binding (mouse) protein.
Length = 341
Score = 31.5 bits (68), Expect = 3.2
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +2
Query: 518 RLIGPQGVTLKSIELLTECYVLVQG 592
R++GP+G+T K +E T C ++V+G
Sbjct: 101 RILGPRGLTAKQLEAETGCKIMVRG 125
>AK027309-1|BAB55032.1| 323|Homo sapiens protein ( Homo sapiens
cDNA FLJ14403 fis, clone HEMBA1003805, highly similar to
Mus musculus KH domain RNA binding protein QKI-5A mRNA.
).
Length = 323
Score = 31.5 bits (68), Expect = 3.2
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +2
Query: 518 RLIGPQGVTLKSIELLTECYVLVQG 592
R++GP+G+T K +E T C ++V+G
Sbjct: 83 RILGPRGLTAKQLEAETGCKIMVRG 107
>AF142422-1|AAF63417.1| 341|Homo sapiens QUAKING isoform 3 protein.
Length = 341
Score = 31.5 bits (68), Expect = 3.2
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +2
Query: 518 RLIGPQGVTLKSIELLTECYVLVQG 592
R++GP+G+T K +E T C ++V+G
Sbjct: 123 RILGPRGLTAKQLEAETGCKIMVRG 147
>AF142421-1|AAF63416.1| 337|Homo sapiens QUAKING isoform 5 protein.
Length = 337
Score = 31.5 bits (68), Expect = 3.2
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +2
Query: 518 RLIGPQGVTLKSIELLTECYVLVQG 592
R++GP+G+T K +E T C ++V+G
Sbjct: 97 RILGPRGLTAKQLEAETGCKIMVRG 121
>AF142420-1|AAF63415.1| 315|Homo sapiens QUAKING isoform 4 protein.
Length = 315
Score = 31.5 bits (68), Expect = 3.2
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +2
Query: 518 RLIGPQGVTLKSIELLTECYVLVQG 592
R++GP+G+T K +E T C ++V+G
Sbjct: 97 RILGPRGLTAKQLEAETGCKIMVRG 121
>AF142419-1|AAF63414.1| 363|Homo sapiens QUAKING isoform 6 protein.
Length = 363
Score = 31.5 bits (68), Expect = 3.2
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +2
Query: 518 RLIGPQGVTLKSIELLTECYVLVQG 592
R++GP+G+T K +E T C ++V+G
Sbjct: 123 RILGPRGLTAKQLEAETGCKIMVRG 147
>AF142418-1|AAF63413.1| 347|Homo sapiens QUAKING isoform 2 protein.
Length = 347
Score = 31.5 bits (68), Expect = 3.2
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +2
Query: 518 RLIGPQGVTLKSIELLTECYVLVQG 592
R++GP+G+T K +E T C ++V+G
Sbjct: 123 RILGPRGLTAKQLEAETGCKIMVRG 147
>AF142417-1|AAF63412.1| 321|Homo sapiens QUAKING isoform 1 protein.
Length = 321
Score = 31.5 bits (68), Expect = 3.2
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +2
Query: 518 RLIGPQGVTLKSIELLTECYVLVQG 592
R++GP+G+T K +E T C ++V+G
Sbjct: 97 RILGPRGLTAKQLEAETGCKIMVRG 121
>AB067808-1|BAB69681.1| 325|Homo sapiens RNA binding protein HQK
protein.
Length = 325
Score = 31.5 bits (68), Expect = 3.2
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +2
Query: 518 RLIGPQGVTLKSIELLTECYVLVQG 592
R++GP+G+T K +E T C ++V+G
Sbjct: 101 RILGPRGLTAKQLEAETGCKIMVRG 125
>AB067801-1|BAB69499.1| 319|Homo sapiens RNA binding protein HQK-7B
protein.
Length = 319
Score = 31.5 bits (68), Expect = 3.2
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +2
Query: 518 RLIGPQGVTLKSIELLTECYVLVQG 592
R++GP+G+T K +E T C ++V+G
Sbjct: 101 RILGPRGLTAKQLEAETGCKIMVRG 125
>AB067800-1|BAB69498.1| 325|Homo sapiens RNA binding protein HQK-7
protein.
Length = 325
Score = 31.5 bits (68), Expect = 3.2
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +2
Query: 518 RLIGPQGVTLKSIELLTECYVLVQG 592
R++GP+G+T K +E T C ++V+G
Sbjct: 101 RILGPRGLTAKQLEAETGCKIMVRG 125
>AB067799-1|BAB69497.1| 319|Homo sapiens RNA binding protein HQK-6
protein.
Length = 319
Score = 31.5 bits (68), Expect = 3.2
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +2
Query: 518 RLIGPQGVTLKSIELLTECYVLVQG 592
R++GP+G+T K +E T C ++V+G
Sbjct: 101 RILGPRGLTAKQLEAETGCKIMVRG 125
>AB067798-1|BAB69496.1| 341|Homo sapiens RNA binding protein HQK-5
protein.
Length = 341
Score = 31.5 bits (68), Expect = 3.2
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +2
Query: 518 RLIGPQGVTLKSIELLTECYVLVQG 592
R++GP+G+T K +E T C ++V+G
Sbjct: 101 RILGPRGLTAKQLEAETGCKIMVRG 125
>BC062318-1|AAH62318.1| 559|Homo sapiens LAMA1 protein protein.
Length = 559
Score = 30.7 bits (66), Expect = 5.5
Identities = 31/100 (31%), Positives = 42/100 (42%), Gaps = 4/100 (4%)
Frame = +1
Query: 19 VPNSK*ISLLNL---FNKKIISLLATLHLIKTNMEV-EETNSVDNAWAMKIPKFTPDDNP 186
+P + SLL + F+ I +L+ L L+ N V E +D W + PK PD
Sbjct: 112 IPEGEGTSLLTMRRSFHGCIKNLIFNLELLDFNSAVGHEQVDLDTCWLSERPKLAPDAED 171
Query: 187 HGLLEESKFATLFPKYREQYLKDAGPWYRKYLANITLLQN 306
LL E + FP EQ + DA Y L QN
Sbjct: 172 SKLLPEPR---AFP---EQCVVDAALEYVPGAHQFGLTQN 205
>BC039051-1|AAH39051.1| 747|Homo sapiens LAMA1 protein protein.
Length = 747
Score = 30.7 bits (66), Expect = 5.5
Identities = 31/100 (31%), Positives = 42/100 (42%), Gaps = 4/100 (4%)
Frame = +1
Query: 19 VPNSK*ISLLNL---FNKKIISLLATLHLIKTNMEV-EETNSVDNAWAMKIPKFTPDDNP 186
+P + SLL + F+ I +L+ L L+ N V E +D W + PK PD
Sbjct: 300 IPEGEGTSLLTMRRSFHGCIKNLIFNLELLDFNSAVGHEQVDLDTCWLSERPKLAPDAED 359
Query: 187 HGLLEESKFATLFPKYREQYLKDAGPWYRKYLANITLLQN 306
LL E + FP EQ + DA Y L QN
Sbjct: 360 SKLLPEPR---AFP---EQCVVDAALEYVPGAHQFGLTQN 393
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,294,435
Number of Sequences: 237096
Number of extensions: 1729078
Number of successful extensions: 3824
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 3755
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3824
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8511181328
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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