Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30833
         (686 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    24   1.0  
DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory pro...    23   3.1  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    22   5.4  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    22   5.4  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   9.5  
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    21   9.5  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   9.5  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 10/23 (43%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
 Frame = -3

Query: 312 LVHQSCCNAIESAHRVHCS-GYA 247
           L +   C  I ++HR HCS GY+
Sbjct: 155 LCNNGTCEDIGNSHRCHCSDGYS 177


>DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory
           protein 18 protein.
          Length = 124

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +2

Query: 92  EYIVPDNAVMGDVL 133
           EY++PDN  + D+L
Sbjct: 19  EYVIPDNIDIDDIL 32


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
 Frame = +1

Query: 262 MDSMSRLN---RIAARLMHKYNAHGSTDVTGFGLLGHAQNLASHQK 390
           +DS S +    + A  L H +N H +++    GL  HA  L S ++
Sbjct: 381 VDSCSNIQTGEQFARLLRHNFNRHLNSNRAPLGLHFHASWLKSKKE 426


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
 Frame = +1

Query: 262 MDSMSRLN---RIAARLMHKYNAHGSTDVTGFGLLGHAQNLASHQK 390
           +DS S +    + A  L H +N H +++    GL  HA  L S ++
Sbjct: 388 VDSCSNIQTGEQFARLLRHNFNRHLNSNRAPLGLHFHASWLKSKKE 433


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +1

Query: 130 IGLDKTSWYTSCSKCSPMVGP 192
           +G+  T+W+ S     PM+ P
Sbjct: 568 LGVALTNWHPSDKSAKPMLKP 588


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/17 (41%), Positives = 8/17 (47%)
 Frame = -2

Query: 166 CNLCTKRFCQDQYITHH 116
           C LC K F     +T H
Sbjct: 80  CRLCKKAFSDSSTLTKH 96


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/17 (41%), Positives = 8/17 (47%)
 Frame = -2

Query: 166 CNLCTKRFCQDQYITHH 116
           C LC K F     +T H
Sbjct: 336 CRLCKKAFSDSSTLTKH 352


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,763
Number of Sequences: 336
Number of extensions: 4388
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)