Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30833
         (686 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    22   6.3  
AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced prot...    22   6.3  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   8.3  
AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding prote...    21   8.3  
AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-bind...    21   8.3  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   8.3  

>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +1

Query: 466 MFQLLQGHAPETSGD 510
           MF+LL G  P T GD
Sbjct: 555 MFELLTGTPPFTGGD 569


>AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 87

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +3

Query: 402 ICNP*SACNCQDGSSSES 455
           +  P +  NC  GSSS+S
Sbjct: 9   LATPRTGTNCSSGSSSDS 26


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = -2

Query: 166 CNLCTKRFCQDQYITHH 116
           CN+C K F     +T H
Sbjct: 94  CNICGKTFAVPARLTRH 110


>AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding protein
           ASP2 protein.
          Length = 142

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 8/31 (25%), Positives = 17/31 (54%)
 Frame = +2

Query: 71  TTICQPNEYIVPDNAVMGDVLVLTKPLGTQV 163
           T + +  EY++PD     D L +++ + T +
Sbjct: 24  TVVAKYMEYLMPDIMPCADELHISEDIATNI 54


>AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-binding
           protein ASP2 protein.
          Length = 142

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 8/31 (25%), Positives = 17/31 (54%)
 Frame = +2

Query: 71  TTICQPNEYIVPDNAVMGDVLVLTKPLGTQV 163
           T + +  EY++PD     D L +++ + T +
Sbjct: 24  TVVAKYMEYLMPDIMPCADELHISEDIATNI 54


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -3

Query: 63  PPIVHQGLMTVCPPVTDVPAS 1
           PPI +   M+  PP+ ++P S
Sbjct: 418 PPIPNMSNMSGMPPLPNMPGS 438


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,493
Number of Sequences: 438
Number of extensions: 4547
Number of successful extensions: 14
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20952180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)