Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30832
         (622 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8IIC2 Cluster: Putative uncharacterized protein; n=4; ...    35   1.8  
UniRef50_Q73I84 Cluster: Prophage LambdaW1, ankyrin repeat domai...    34   3.1  
UniRef50_Q5U0T9 Cluster: AT16405p; n=3; Sophophora|Rep: AT16405p...    33   5.5  
UniRef50_A5E1U9 Cluster: Putative uncharacterized protein; n=1; ...    33   5.5  
UniRef50_Q550D3 Cluster: Putative uncharacterized protein; n=2; ...    33   7.3  
UniRef50_Q23WM3 Cluster: Protein kinase domain containing protei...    33   7.3  
UniRef50_Q20456 Cluster: Putative uncharacterized protein hum-4;...    33   7.3  
UniRef50_A4GFC9 Cluster: Pex24p; n=1; Pichia angusta|Rep: Pex24p...    32   9.6  

>UniRef50_Q8IIC2 Cluster: Putative uncharacterized protein; n=4;
            Plasmodium|Rep: Putative uncharacterized protein -
            Plasmodium falciparum (isolate 3D7)
          Length = 1653

 Score = 34.7 bits (76), Expect = 1.8
 Identities = 22/83 (26%), Positives = 38/83 (45%)
 Frame = -1

Query: 256  HNYVDTPKSFFTLKIFSITTNISLVSYSSRFKRENLNLRFPMTVSKIQFFLLVLKFEYFD 77
            +NY+ T  S  T+++ +  TN  +V     F  +   +R+    +K+  F +    + FD
Sbjct: 1311 YNYIATGSSDETIELINADTNFDIVQVYDNFDDK---VRYVQLKNKL-LFAISNDLKLFD 1366

Query: 76   YKSSDLNFYLNFKNVANSYKHFY 8
             +    N YLN  N  NSY   +
Sbjct: 1367 IRVGKKNIYLNNINNFNSYNKLF 1389


>UniRef50_Q73I84 Cluster: Prophage LambdaW1, ankyrin repeat domain
           protein; n=4; Wolbachia|Rep: Prophage LambdaW1, ankyrin
           repeat domain protein - Wolbachia pipientis wMel
          Length = 701

 Score = 33.9 bits (74), Expect = 3.1
 Identities = 22/76 (28%), Positives = 38/76 (50%)
 Frame = -1

Query: 256 HNYVDTPKSFFTLKIFSITTNISLVSYSSRFKRENLNLRFPMTVSKIQFFLLVLKFEYFD 77
           HNY    + FFT     +   ++ +    R+K  NLN  + +T++  QFF  + +F +  
Sbjct: 270 HNY-HVERCFFTDNQKKLRKELNNILNRHRYKEGNLN--YIVTLTLFQFFEDLERFLHEH 326

Query: 76  YKSSDLNFYLNFKNVA 29
             + DL   LN +N+A
Sbjct: 327 KNNKDLKVVLNTRNIA 342


>UniRef50_Q5U0T9 Cluster: AT16405p; n=3; Sophophora|Rep: AT16405p -
            Drosophila melanogaster (Fruit fly)
          Length = 1767

 Score = 33.1 bits (72), Expect = 5.5
 Identities = 17/46 (36%), Positives = 27/46 (58%)
 Frame = -1

Query: 253  NYVDTPKSFFTLKIFSITTNISLVSYSSRFKRENLNLRFPMTVSKI 116
            NY++  KS  T+K F   T+I L+  + R K E+L ++  M  +KI
Sbjct: 1214 NYIEEMKSRATIKSFKFKTSIQLLKDAMRLKYESLLIQGQMVRTKI 1259


>UniRef50_A5E1U9 Cluster: Putative uncharacterized protein; n=1;
           Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
           uncharacterized protein - Lodderomyces elongisporus
           (Yeast) (Saccharomyces elongisporus)
          Length = 269

 Score = 33.1 bits (72), Expect = 5.5
 Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
 Frame = -1

Query: 244 DTPK-SFFTLKIFSITTNISLVSYSSRFKRENLNLRFPMTVSKIQFFLLVLKFEYFDYKS 68
           D PK S FTL +  I T +  V    ++  ENL+LRF + V K+Q  L +   +Y   K 
Sbjct: 134 DKPKFSDFTL-VDEILTQVGGVERFEQYGLENLDLRFEL-VKKLQSSLGIELNDYTISKC 191

Query: 67  SDL-NFYLNFKNVANS 23
            +L + Y+  +NV N+
Sbjct: 192 HNLKDLYVEIENVVNT 207


>UniRef50_Q550D3 Cluster: Putative uncharacterized protein; n=2;
            Dictyostelium discoideum|Rep: Putative uncharacterized
            protein - Dictyostelium discoideum AX4
          Length = 1462

 Score = 32.7 bits (71), Expect = 7.3
 Identities = 25/99 (25%), Positives = 45/99 (45%)
 Frame = -1

Query: 328  LQWTFLQRTNHIAFSFELNF**VRHNYVDTPKSFFTLKIFSITTNISLVSYSSRFKRENL 149
            L W+    +  +  +F++ F       +DT  SF+   +F +  +   V Y ++FK + L
Sbjct: 1191 LHWSRFDISTFLLANFDIQFFSFPRFALDTHYSFYQEAVFILNNHFDKVRYPNKFKYD-L 1249

Query: 148  NLRFPMTVSKIQFFLLVLKFEYFDYKSSDLNFYLNFKNV 32
            N+ F  T   I F  +++ F     K  + N Y  F N+
Sbjct: 1250 NV-FNDTTFPIAFLSVLIDFL---SKRKNSNHYEKFMNI 1284


>UniRef50_Q23WM3 Cluster: Protein kinase domain containing protein;
           n=1; Tetrahymena thermophila SB210|Rep: Protein kinase
           domain containing protein - Tetrahymena thermophila
           SB210
          Length = 358

 Score = 32.7 bits (71), Expect = 7.3
 Identities = 11/25 (44%), Positives = 20/25 (80%)
 Frame = -1

Query: 91  FEYFDYKSSDLNFYLNFKNVANSYK 17
           F+Y D KSS ++F++NFK++ N ++
Sbjct: 286 FQYLDNKSSYVSFWMNFKDILNEFE 310


>UniRef50_Q20456 Cluster: Putative uncharacterized protein hum-4;
           n=2; Caenorhabditis|Rep: Putative uncharacterized
           protein hum-4 - Caenorhabditis elegans
          Length = 2557

 Score = 32.7 bits (71), Expect = 7.3
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = +2

Query: 410 NVNNFYEIYFLFSEQIMLPFTIKALDEFYFI 502
           N N FYE+Y   S+++   F IK L +F++I
Sbjct: 182 NFNIFYEVYHGLSDEMKAKFGIKGLQKFFYI 212


>UniRef50_A4GFC9 Cluster: Pex24p; n=1; Pichia angusta|Rep: Pex24p -
           Pichia angusta (Yeast) (Hansenula polymorpha)
          Length = 554

 Score = 32.3 bits (70), Expect = 9.6
 Identities = 18/43 (41%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
 Frame = +1

Query: 262 LIKNLTRMK-TLYDSYVVKKSIVKQ*RKHYFNRF*LIRVTMVL 387
           +IK +TRM+ ++Y++Y  K    K+  KH+FN   LI +T+VL
Sbjct: 331 IIKMMTRMQDSIYENYSFKDE--KRSTKHFFNLIALILITVVL 371


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 507,976,500
Number of Sequences: 1657284
Number of extensions: 9113900
Number of successful extensions: 19755
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 19063
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19749
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 45221970467
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)