Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30832
         (622 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    24   0.89 
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    22   4.8  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   4.8  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   4.8  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   4.8  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 24.2 bits (50), Expect = 0.89
 Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
 Frame = +2

Query: 167 PTGIRYKRDIS-CYAEDL*SKKTLWRVYIIVTDLLK 271
           PT  +Y   ++ CYA  L   K LW +Y +  D LK
Sbjct: 34  PTNQKYYPSLAKCYACLLMVVKILWVIYWLQDDALK 69


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +1

Query: 556 RLTCRGSGQVDVISHLKKKKK 618
           RL     G+  +I+HLK KKK
Sbjct: 96  RLVWTLPGKTKMIAHLKDKKK 116


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +1

Query: 556 RLTCRGSGQVDVISHLKKKKK 618
           RL     G+  +I+HLK KKK
Sbjct: 410 RLVWTLPGKTKMIAHLKDKKK 430


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +1

Query: 556 RLTCRGSGQVDVISHLKKKKK 618
           RL     G+  +I+HLK KKK
Sbjct: 643 RLVWTLPGKTKMIAHLKDKKK 663


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +1

Query: 556 RLTCRGSGQVDVISHLKKKKK 618
           RL     G+  +I+HLK KKK
Sbjct: 643 RLVWTLPGKTKMIAHLKDKKK 663


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,307
Number of Sequences: 336
Number of extensions: 2651
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15875032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)