Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30829
(602 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P50882 Cluster: 60S ribosomal protein L9; n=17; Eukaryo... 154 1e-36
UniRef50_P32969 Cluster: 60S ribosomal protein L9; n=86; Eukaryo... 128 1e-28
UniRef50_P49210 Cluster: 60S ribosomal protein L9; n=55; Eukaryo... 112 7e-24
UniRef50_O02376 Cluster: 60S ribosomal protein L9; n=1; Haemonch... 109 4e-23
UniRef50_Q10232 Cluster: 60S ribosomal protein L9-A; n=6; Eukary... 108 1e-22
UniRef50_Q54XI5 Cluster: 60S ribosomal protein L9; n=1; Dictyost... 103 4e-21
UniRef50_Q4P4X4 Cluster: Putative uncharacterized protein; n=1; ... 101 1e-20
UniRef50_P05738 Cluster: 60S ribosomal protein L9-A; n=40; Eukar... 98 2e-19
UniRef50_Q7QU08 Cluster: GLP_108_35846_36403; n=1; Giardia lambl... 93 6e-18
UniRef50_Q9AW64 Cluster: 60S ribosomal protein L9; n=1; Guillard... 89 1e-16
UniRef50_UPI0001554F35 Cluster: PREDICTED: similar to Chain A, S... 87 3e-16
UniRef50_UPI00004985C5 Cluster: 60S ribosomal protein L9; n=2; E... 87 4e-16
UniRef50_A0DI71 Cluster: Chromosome undetermined scaffold_51, wh... 82 1e-14
UniRef50_UPI0000D9FBAF Cluster: PREDICTED: similar to 60S riboso... 80 5e-14
UniRef50_Q8SSF7 Cluster: 60S RIBOSOMAL PROTEIN L9; n=1; Encephal... 76 6e-13
UniRef50_Q8U015 Cluster: 50S ribosomal protein L6P; n=14; Euryar... 71 3e-11
UniRef50_Q5JJG4 Cluster: 50S ribosomal protein L6P; n=3; Archaea... 69 1e-10
UniRef50_O28370 Cluster: 50S ribosomal protein L6P; n=4; Euryarc... 65 1e-09
UniRef50_A0RVY9 Cluster: Ribosomal protein L6P/L9E; n=1; Cenarch... 64 2e-09
UniRef50_UPI0000DA368E Cluster: PREDICTED: similar to 60S riboso... 64 3e-09
UniRef50_A2GN76 Cluster: Ribosomal protein L6, putative; n=2; Tr... 63 6e-09
UniRef50_A1RXT3 Cluster: Ribosomal protein L6; n=2; Thermoprotei... 62 1e-08
UniRef50_A3CT13 Cluster: 50S ribosomal protein L6P; n=2; Methano... 61 2e-08
UniRef50_UPI000021E22B Cluster: PREDICTED: similar to ribosomal ... 60 4e-08
UniRef50_UPI0000DA3DDB Cluster: PREDICTED: similar to 60S riboso... 59 7e-08
UniRef50_O05637 Cluster: 50S ribosomal protein L6P; n=8; Thermop... 59 7e-08
UniRef50_Q8ZVA7 Cluster: 50S ribosomal protein L6P; n=5; Thermop... 57 3e-07
UniRef50_Q74MR6 Cluster: 50S ribosomal protein L6P; n=1; Nanoarc... 56 5e-07
UniRef50_Q3LWE8 Cluster: Ribosomal protein L9; n=1; Bigelowiella... 55 1e-06
UniRef50_A7DSX9 Cluster: Ribosomal protein L6; n=1; Candidatus N... 55 1e-06
UniRef50_Q97BW0 Cluster: 50S ribosomal protein L6P; n=1; Thermop... 55 1e-06
UniRef50_P14135 Cluster: 50S ribosomal protein L6P; n=5; Halobac... 53 5e-06
UniRef50_Q673R2 Cluster: 50S ribosomal protein L6P; n=2; environ... 52 8e-06
UniRef50_Q6L1B1 Cluster: 50S ribosomal protein L6P; n=3; Thermop... 50 4e-05
UniRef50_A4M9T7 Cluster: 50S ribosomal protein L6; n=3; Thermoto... 49 1e-04
UniRef50_Q8PV34 Cluster: 50S ribosomal protein L6P; n=4; Methano... 49 1e-04
UniRef50_Q8TW14 Cluster: 50S ribosomal protein L6P; n=3; cellula... 48 2e-04
UniRef50_Q661C7 Cluster: 50S ribosomal protein L6; n=9; cellular... 46 5e-04
UniRef50_Q5AEN3 Cluster: Putative uncharacterized protein; n=1; ... 46 0.001
UniRef50_Q8ETW8 Cluster: 50S ribosomal protein L6; n=40; Bacteri... 44 0.002
UniRef50_A0BWM5 Cluster: Chromosome undetermined scaffold_132, w... 44 0.003
UniRef50_Q48D51 Cluster: 50S ribosomal protein L6; n=6; Proteoba... 44 0.004
UniRef50_Q6E6D2 Cluster: Large subunit ribosomal protein L9e; n=... 42 0.015
UniRef50_Q9ZAE4 Cluster: 50S ribosomal protein L6; n=4; cellular... 41 0.026
UniRef50_P46898 Cluster: 50S ribosomal protein L6; n=7; Bacilli|... 40 0.045
UniRef50_Q8R7W9 Cluster: 50S ribosomal protein L6; n=22; Bacteri... 40 0.060
UniRef50_A5GIT1 Cluster: 50S ribosomal protein L6; n=7; Bacteria... 38 0.14
UniRef50_Q3ZZN4 Cluster: 50S ribosomal protein L6; n=7; Bacteria... 38 0.14
UniRef50_Q9RSL3 Cluster: 50S ribosomal protein L6; n=65; cellula... 37 0.42
UniRef50_Q83ER1 Cluster: 50S ribosomal protein L6; n=108; Proteo... 37 0.42
UniRef50_Q7UN05 Cluster: 50S ribosomal protein L6; n=3; Planctom... 36 0.56
UniRef50_A5LSZ6 Cluster: 50S ribosomal protein L6; n=1; Streptoc... 36 0.97
UniRef50_Q8A491 Cluster: 50S ribosomal protein L6; n=34; Bacteri... 35 1.3
UniRef50_Q6YR07 Cluster: 50S ribosomal protein L6; n=16; Firmicu... 35 1.7
UniRef50_Q11HR7 Cluster: 50S ribosomal protein L6; n=73; Proteob... 35 1.7
UniRef50_Q4QI55 Cluster: Putative uncharacterized protein; n=3; ... 34 2.3
UniRef50_Q0ID19 Cluster: 50S ribosomal protein L6; n=6; Bacteria... 34 2.3
UniRef50_Q6KI40 Cluster: 50S ribosomal protein l6; n=4; Mycoplas... 34 3.0
UniRef50_Q2JIL3 Cluster: 50S ribosomal protein L6; n=44; cellula... 34 3.0
UniRef50_Q9A8T8 Cluster: 50S ribosomal protein L6; n=16; Bacteri... 33 3.9
UniRef50_Q9ZI38 Cluster: 50S ribosomal protein L6; n=2; Aquifex ... 33 3.9
UniRef50_Q8TMD2 Cluster: Putative uncharacterized protein; n=3; ... 33 5.2
UniRef50_O67565 Cluster: 50S ribosomal protein L6; n=1; Aquifex ... 33 5.2
UniRef50_Q2PRK5 Cluster: Odorant receptor; n=4; Danio rerio|Rep:... 33 6.9
UniRef50_A0DZ50 Cluster: Citrate synthase; n=6; Paramecium tetra... 33 6.9
UniRef50_Q9ZCS0 Cluster: 50S ribosomal protein L6; n=10; Rickett... 33 6.9
UniRef50_Q7VQD3 Cluster: 50S ribosomal subunit protein L6; n=2; ... 32 9.1
UniRef50_Q98PZ7 Cluster: 50S ribosomal protein L6; n=29; Bacteri... 32 9.1
UniRef50_Q5FM76 Cluster: 50S ribosomal protein L6; n=10; Firmicu... 32 9.1
>UniRef50_P50882 Cluster: 60S ribosomal protein L9; n=17;
Eukaryota|Rep: 60S ribosomal protein L9 - Drosophila
melanogaster (Fruit fly)
Length = 190
Score = 154 bits (374), Expect = 1e-36
Identities = 72/84 (85%), Positives = 78/84 (92%)
Frame = +3
Query: 258 GFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELII 437
GFQYKMRAVYAHFPINCVT+E N++IEIRNFLGEKYIRRV+MAPGVTVVNS QKDELI+
Sbjct: 85 GFQYKMRAVYAHFPINCVTSENNTVIEIRNFLGEKYIRRVEMAPGVTVVNSTAQKDELIV 144
Query: 438 EGNSLEDVSSSAALIQQSTTVKNK 509
EGN +E VS SAALIQQSTTVKNK
Sbjct: 145 EGNDIESVSGSAALIQQSTTVKNK 168
Score = 120 bits (288), Expect = 3e-26
Identities = 56/83 (67%), Positives = 68/83 (81%)
Frame = +1
Query: 7 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFG 186
M+ I +NQ VKIP + VK+R+VT+ G RG LKR+FKHLA+D+ M + R LKVEKWFG
Sbjct: 1 MRTINSNQCVKIPKDIKASVKARVVTITGTRGTLKRSFKHLALDMYMPDKRTLKVEKWFG 60
Query: 187 SKKELAAVRTVCSHVENMIKGVT 255
+KKELAAVRTVCSH+ENMIKGVT
Sbjct: 61 TKKELAAVRTVCSHIENMIKGVT 83
Score = 39.9 bits (89), Expect = 0.045
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +2
Query: 509 DIRKFLDGLYVSEKTTVV 562
DIRKFLDGLYVSEKTTVV
Sbjct: 169 DIRKFLDGLYVSEKTTVV 186
>UniRef50_P32969 Cluster: 60S ribosomal protein L9; n=86;
Eukaryota|Rep: 60S ribosomal protein L9 - Homo sapiens
(Human)
Length = 192
Score = 128 bits (308), Expect = 1e-28
Identities = 61/84 (72%), Positives = 70/84 (83%)
Frame = +3
Query: 258 GFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELII 437
GF+YKMR+VYAHFPIN V E S++EIRNFLGEKYIRRV+M PGV S QKDELI+
Sbjct: 87 GFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRPGVACSVSQAQKDELIL 146
Query: 438 EGNSLEDVSSSAALIQQSTTVKNK 509
EGN +E VS+SAALIQQ+TTVKNK
Sbjct: 147 EGNDIELVSNSAALIQQATTVKNK 170
Score = 102 bits (245), Expect = 6e-21
Identities = 45/85 (52%), Positives = 66/85 (77%), Gaps = 2/85 (2%)
Frame = +1
Query: 7 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRL--LKVEKW 180
MK I++NQ V IP+ + + +K R V VKGPRG L+R+F H+ V++ ++ + L+V+KW
Sbjct: 1 MKTILSNQTVDIPENVDITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKKKKRLRVDKW 60
Query: 181 FGSKKELAAVRTVCSHVENMIKGVT 255
+G++KELA VRT+CSHV+NMIKGVT
Sbjct: 61 WGNRKELATVRTICSHVQNMIKGVT 85
Score = 34.7 bits (76), Expect = 1.7
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +2
Query: 509 DIRKFLDGLYVSEKTTV 559
DIRKFLDG+YVSEK TV
Sbjct: 171 DIRKFLDGIYVSEKGTV 187
>UniRef50_P49210 Cluster: 60S ribosomal protein L9; n=55;
Eukaryota|Rep: 60S ribosomal protein L9 - Oryza sativa
subsp. japonica (Rice)
Length = 190
Score = 112 bits (269), Expect = 7e-24
Identities = 53/85 (62%), Positives = 64/85 (75%)
Frame = +3
Query: 255 KGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELI 434
KG++YKMR VYAHFPIN T N+ IEIRNFLGEK +R+V M GVT++ S K KDEL+
Sbjct: 85 KGYRYKMRFVYAHFPINASITNSNTAIEIRNFLGEKKVRKVDMLEGVTILRSEKVKDELV 144
Query: 435 IEGNSLEDVSSSAALIQQSTTVKNK 509
++GN +E VS SAALI Q VKNK
Sbjct: 145 LDGNDIELVSRSAALINQKCHVKNK 169
Score = 99 bits (238), Expect = 4e-20
Identities = 44/85 (51%), Positives = 68/85 (80%), Gaps = 1/85 (1%)
Frame = +1
Query: 7 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMV-NPRLLKVEKWF 183
MK I+A++ ++IP+G+TV V +++VTV+GPRG L RNFKHL +D +++ R L+V+ WF
Sbjct: 1 MKTILASETMEIPEGVTVQVAAKVVTVEGPRGKLTRNFKHLNLDFQLLEGGRKLQVDAWF 60
Query: 184 GSKKELAAVRTVCSHVENMIKGVTK 258
G+++ +AA+RT SHV+N+I GVTK
Sbjct: 61 GTRRTMAAIRTAISHVQNLITGVTK 85
Score = 34.3 bits (75), Expect = 2.3
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +2
Query: 509 DIRKFLDGLYVSEKTTVVLD 568
DIRKFLDG+YVS+K T+ D
Sbjct: 170 DIRKFLDGIYVSDKGTITED 189
>UniRef50_O02376 Cluster: 60S ribosomal protein L9; n=1; Haemonchus
contortus|Rep: 60S ribosomal protein L9 - Haemonchus
contortus (Barber pole worm)
Length = 141
Score = 109 bits (263), Expect = 4e-23
Identities = 48/84 (57%), Positives = 64/84 (76%)
Frame = +1
Query: 7 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFG 186
MK + +N V PDG+T VK+R+V V GPRG LKR+F+HL +++ V L+V KWFG
Sbjct: 1 MKLVESNDTVDFPDGVTFTVKNRVVHVTGPRGTLKRDFRHLHMEMERVGKNQLRVRKWFG 60
Query: 187 SKKELAAVRTVCSHVENMIKGVTK 258
+KE+AA+RTVCSH++NMIKGVTK
Sbjct: 61 VRKEIAAIRTVCSHIQNMIKGVTK 84
Score = 64.1 bits (149), Expect = 2e-09
Identities = 27/43 (62%), Positives = 33/43 (76%)
Frame = +3
Query: 255 KGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKM 383
KGF+YKMR+VYAHFPIN +G +EIRNFLGEK +R V +
Sbjct: 84 KGFRYKMRSVYAHFPINVTLQDGGRTVEIRNFLGEKIVRPVPL 126
>UniRef50_Q10232 Cluster: 60S ribosomal protein L9-A; n=6;
Eukaryota|Rep: 60S ribosomal protein L9-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 190
Score = 108 bits (259), Expect = 1e-22
Identities = 52/85 (61%), Positives = 64/85 (75%)
Frame = +3
Query: 255 KGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELI 434
+GF+YKMR VYAHFPIN TE +++EIRNFLGE+ R +K PGVTV S KDE+I
Sbjct: 84 QGFRYKMRLVYAHFPININLTENGTVVEIRNFLGERITRVIKCLPGVTVSISSAVKDEII 143
Query: 435 IEGNSLEDVSSSAALIQQSTTVKNK 509
+EGNSLE+VS SAA I+Q V+NK
Sbjct: 144 LEGNSLENVSQSAANIKQICNVRNK 168
Score = 73.3 bits (172), Expect = 4e-12
Identities = 36/101 (35%), Positives = 60/101 (59%)
Frame = +1
Query: 10 KQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGS 189
+ I ++ + IP G+TV +K+R VTV GPRG LK+N +H+ ++++ +K W GS
Sbjct: 3 RDIYKDETLTIPKGVTVDIKARNVTVTGPRGTLKQNLRHVDIEMKK-QGNTIKFIVWHGS 61
Query: 190 KKELAAVRTVCSHVENMIKGVTKASNTRCVLCMLTSPLTVS 312
+K A +R+V S + NMI GVT+ + L P+ ++
Sbjct: 62 RKHNACIRSVYSIINNMIIGVTQGFRYKMRLVYAHFPININ 102
>UniRef50_Q54XI5 Cluster: 60S ribosomal protein L9; n=1;
Dictyostelium discoideum AX4|Rep: 60S ribosomal protein
L9 - Dictyostelium discoideum AX4
Length = 206
Score = 103 bits (246), Expect = 4e-21
Identities = 44/85 (51%), Positives = 61/85 (71%)
Frame = +3
Query: 255 KGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELI 434
KG++YKMR VYAHFPIN T+G ++EIRNF GEK +RR+++ G+T + K KDE++
Sbjct: 102 KGYEYKMRFVYAHFPINVAVTDGGRVVEIRNFFGEKIVRRIELLDGITCYRNEKAKDEIV 161
Query: 435 IEGNSLEDVSSSAALIQQSTTVKNK 509
+ GNSLE +S S A IQ + +K K
Sbjct: 162 LTGNSLELLSQSCATIQLRSAIKYK 186
Score = 81.0 bits (191), Expect = 2e-14
Identities = 37/87 (42%), Positives = 55/87 (63%)
Frame = +1
Query: 52 LTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHV 231
+TV VK R V V GPRG L ++F H +VDI +V + L V+ WFG++K++A ++T+ S +
Sbjct: 34 VTVDVKGRSVKVTGPRGTLSKSFDHASVDINLVGKKELTVDLWFGNRKQIACIKTITSII 93
Query: 232 ENMIKGVTKASNTRCVLCMLTSPLTVS 312
ENMI GVTK + P+ V+
Sbjct: 94 ENMITGVTKGYEYKMRFVYAHFPINVA 120
>UniRef50_Q4P4X4 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 252
Score = 101 bits (242), Expect = 1e-20
Identities = 46/84 (54%), Positives = 59/84 (70%)
Frame = +3
Query: 258 GFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELII 437
GFQYKMRAVYAHFPIN + EIRNFLGEK +R + M GVT+ QKD++++
Sbjct: 147 GFQYKMRAVYAHFPINIIIAGDKKSAEIRNFLGEKRVRNIAMLEGVTIQEDKAQKDQVLV 206
Query: 438 EGNSLEDVSSSAALIQQSTTVKNK 509
EGN ++ VS SAAL+ +T V+NK
Sbjct: 207 EGNDIDLVSQSAALLHGATLVRNK 230
Score = 37.1 bits (82), Expect = 0.32
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Frame = +1
Query: 103 VLKRNFKHLAVDIRMVNP---RLLKVEKWFGSKKELAAVRTVCSHVENMIKGVT 255
V +++ KH+ +D R++ + +K W +K A +RT + V NMIKGVT
Sbjct: 92 VSQQSLKHMNLDARIIKSPAGQKIKFVVWHAGRKHAACLRTAQACVANMIKGVT 145
Score = 33.9 bits (74), Expect = 3.0
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +1
Query: 7 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRN 117
M QI + +P ++V V SR+ TVKGPRG L ++
Sbjct: 1 MLQIFKELDLAVPADVSVSVSSRVFTVKGPRGSLTKS 37
>UniRef50_P05738 Cluster: 60S ribosomal protein L9-A; n=40;
Eukaryota|Rep: 60S ribosomal protein L9-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 191
Score = 97.9 bits (233), Expect = 2e-19
Identities = 48/87 (55%), Positives = 62/87 (71%), Gaps = 2/87 (2%)
Frame = +3
Query: 255 KGFQYKMRAVYAHFPINC--VTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDE 428
KG++YKMR VYAHFPIN V +G IE+RNFLG+K IR V + GVT+ S KDE
Sbjct: 84 KGYKYKMRYVYAHFPINVNIVEKDGAKFIEVRNFLGDKKIRNVPVRDGVTIEFSTNVKDE 143
Query: 429 LIIEGNSLEDVSSSAALIQQSTTVKNK 509
+++ GNS+EDVS +AA +QQ V+NK
Sbjct: 144 IVLSGNSVEDVSQNAADLQQICRVRNK 170
Score = 89.4 bits (212), Expect = 6e-17
Identities = 43/84 (51%), Positives = 59/84 (70%)
Frame = +1
Query: 7 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFG 186
MK I Q++++P+G+TV +KSR+V V GPRG L +N KH+ V VN +L+KV G
Sbjct: 1 MKYIQTEQQIEVPEGVTVSIKSRIVKVVGPRGTLTKNLKHIDVTFTKVNNQLIKVAVHNG 60
Query: 187 SKKELAAVRTVCSHVENMIKGVTK 258
+K +AA+RTV S V+NMI GVTK
Sbjct: 61 GRKHVAALRTVKSLVDNMITGVTK 84
>UniRef50_Q7QU08 Cluster: GLP_108_35846_36403; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_108_35846_36403 - Giardia lamblia
ATCC 50803
Length = 185
Score = 92.7 bits (220), Expect = 6e-18
Identities = 44/84 (52%), Positives = 55/84 (65%)
Frame = +3
Query: 258 GFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELII 437
GF+YKMR YAHFPI + N IEIRNF+ + RR++ PGVT+ S KDELI+
Sbjct: 83 GFEYKMRLAYAHFPIAATVVDNNKAIEIRNFMHQIKTRRIECLPGVTIAMSTNVKDELIL 142
Query: 438 EGNSLEDVSSSAALIQQSTTVKNK 509
G S+EDVS +AA I +S V NK
Sbjct: 143 RGISIEDVSHTAARIHESLKVPNK 166
Score = 71.3 bits (167), Expect = 2e-11
Identities = 33/80 (41%), Positives = 47/80 (58%)
Frame = +1
Query: 16 IVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKK 195
+ ++ +K+P + + R+VTVKG +G L R+F H +DI N + V WF K
Sbjct: 3 LCSSMTIKVPTDVECTINKRVVTVKGKKGTLVRDFSHAPLDITHANDTI-SVAVWFPRGK 61
Query: 196 ELAAVRTVCSHVENMIKGVT 255
A RT+CSH+ENM KGVT
Sbjct: 62 RNALPRTICSHIENMFKGVT 81
>UniRef50_Q9AW64 Cluster: 60S ribosomal protein L9; n=1; Guillardia
theta|Rep: 60S ribosomal protein L9 - Guillardia theta
(Cryptomonas phi)
Length = 188
Score = 88.6 bits (210), Expect = 1e-16
Identities = 42/84 (50%), Positives = 57/84 (67%)
Frame = +3
Query: 258 GFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELII 437
GF+Y ++ +YAHFPIN T+ S +EIRNFLGEK IR++ M GV + + +KDE+ +
Sbjct: 86 GFEYILQPIYAHFPINLSITDDGSCLEIRNFLGEKRIRKIYMGQGVKIKKNEAKKDEISV 145
Query: 438 EGNSLEDVSSSAALIQQSTTVKNK 509
G+ L VS +AA IQQS KNK
Sbjct: 146 FGSDLNLVSLNAASIQQSCQAKNK 169
Score = 54.4 bits (125), Expect = 2e-06
Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Frame = +1
Query: 7 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRL-LKVEKWF 183
M I +K+KIP + + K+R ++ G G + R+F+ + IR + + + W
Sbjct: 1 MLTIKTIRKIKIPKNVKIKTKARKISATGSLGSIIRSFEKTQISIRYFEKKKEIILLLWM 60
Query: 184 GSKKELAAVRTVCSHVENMIKGVT 255
KK+LA + T+ SH+ NMI GV+
Sbjct: 61 AGKKQLAKLNTIASHITNMIVGVS 84
>UniRef50_UPI0001554F35 Cluster: PREDICTED: similar to Chain A,
Solution Structure Of The N-Terminal Domain Of Human
Ribosomal Protein L9; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to Chain A, Solution Structure Of The
N-Terminal Domain Of Human Ribosomal Protein L9 -
Ornithorhynchus anatinus
Length = 143
Score = 87.0 bits (206), Expect = 3e-16
Identities = 49/110 (44%), Positives = 71/110 (64%), Gaps = 3/110 (2%)
Frame = +1
Query: 7 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLK--VEKW 180
MK I++NQ V IP + + +K R V VKGP+G L R+F H+ V++ ++ +L K V+KW
Sbjct: 1 MKTILSNQTVDIPANIGIILKGRTVIVKGPQGSLHRDFNHINVELSLLGKKLKKFHVDKW 60
Query: 181 FGSKKELAAVRTVCSHVENMIKGVTKASNTRCVLCMLTSPLTVSPL-RVI 327
+G++KELA V T+CS V+N IK VT T V + TV+PL RV+
Sbjct: 61 WGNRKELATVHTICSPVQNTIKWVT--LGTSRVKESVGKEKTVTPLDRVV 108
>UniRef50_UPI00004985C5 Cluster: 60S ribosomal protein L9; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L9 - Entamoeba histolytica HM-1:IMSS
Length = 197
Score = 86.6 bits (205), Expect = 4e-16
Identities = 42/85 (49%), Positives = 55/85 (64%)
Frame = +3
Query: 255 KGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELI 434
KG+QYKMR VYAHFP+ V + I+++NFLGEK R ++M GV V KDE+
Sbjct: 94 KGYQYKMRVVYAHFPVTLVIADDGKSIQVQNFLGEKRTRHIEMYDGVVV--KKLGKDEIC 151
Query: 435 IEGNSLEDVSSSAALIQQSTTVKNK 509
+EGN +E VS SAA I + V+NK
Sbjct: 152 LEGNDVEKVSQSAANIHAANLVRNK 176
Score = 68.9 bits (161), Expect = 9e-11
Identities = 34/103 (33%), Positives = 60/103 (58%), Gaps = 9/103 (8%)
Frame = +1
Query: 28 QKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDI-------RMVNPR--LLKVEKW 180
+ V IP+G+ + + + + V GPRG L R F+H VDI + P+ ++ ++ W
Sbjct: 9 EHVVIPEGVNIEINRKNIKVTGPRGSLTREFQHPKVDIYASKLVVKKEGPKENVVVIDMW 68
Query: 181 FGSKKELAAVRTVCSHVENMIKGVTKASNTRCVLCMLTSPLTV 309
+G++++ A VRT+ SH++NMI GVTK + + P+T+
Sbjct: 69 YGNRRDSAVVRTIASHIKNMITGVTKGYQYKMRVVYAHFPVTL 111
>UniRef50_A0DI71 Cluster: Chromosome undetermined scaffold_51, whole
genome shotgun sequence; n=6; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_51, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 196
Score = 81.8 bits (193), Expect = 1e-14
Identities = 40/85 (47%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Frame = +3
Query: 258 GFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVV-NSPKQKDELI 434
G+++KM YAHFPI +EI+NFLGEK IR +K PGVT+ N ++K+ L
Sbjct: 94 GYKFKMVLAYAHFPIIINLIGNGQGVEIKNFLGEKIIRTIKCLPGVTITRNEAEEKNVLT 153
Query: 435 IEGNSLEDVSSSAALIQQSTTVKNK 509
++GN L +VS + ALI Q+ VKNK
Sbjct: 154 LQGNDLNNVSLTCALIHQACAVKNK 178
Score = 70.1 bits (164), Expect = 4e-11
Identities = 39/111 (35%), Positives = 62/111 (55%), Gaps = 9/111 (8%)
Frame = +1
Query: 7 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRM---VNPR------ 159
MK I+ + V IP+ + + KS++V VKGPRG L +NF+H A+DI++ VN +
Sbjct: 1 MKYILTEEHVPIPEKIEITQKSKVVKVKGPRGELTKNFRHSALDIQVQKKVNKKNNVAKS 60
Query: 160 LLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKASNTRCVLCMLTSPLTVS 312
+ V W +K+ V +V S + NMI+GVT + VL P+ ++
Sbjct: 61 RVSVRMWQSYRKQRCQVNSVASQIRNMIRGVTTGYKFKMVLAYAHFPIIIN 111
>UniRef50_UPI0000D9FBAF Cluster: PREDICTED: similar to 60S ribosomal
protein L9, partial; n=1; Macaca mulatta|Rep: PREDICTED:
similar to 60S ribosomal protein L9, partial - Macaca
mulatta
Length = 179
Score = 79.8 bits (188), Expect = 5e-14
Identities = 43/86 (50%), Positives = 56/86 (65%), Gaps = 4/86 (4%)
Frame = +1
Query: 7 MKQIVANQKVKIP-DGLTVHV--KSRLVTVKGPRGVLKRNFKHLAVDIRMVNP-RLLKVE 174
MK I + ++IP DG TV V KSR + V G G L+R F+H+ VD+++V R + VE
Sbjct: 60 MKTIHSQIDIQIPEDGSTVKVTLKSRHIVVSGKYGKLERTFRHIPVDMKLVEDGRKITVE 119
Query: 175 KWFGSKKELAAVRTVCSHVENMIKGV 252
WFG K A +RTVCSH+ENMI GV
Sbjct: 120 MWFGLTKNKACIRTVCSHIENMITGV 145
Score = 47.2 bits (107), Expect = 3e-04
Identities = 21/31 (67%), Positives = 23/31 (74%)
Frame = +3
Query: 261 FQYKMRAVYAHFPINCVTTEGNSIIEIRNFL 353
+QYK+R VYAHFPIN T S IEIRNFL
Sbjct: 149 YQYKLRFVYAHFPINSNITNDGSTIEIRNFL 179
>UniRef50_Q8SSF7 Cluster: 60S RIBOSOMAL PROTEIN L9; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L9 -
Encephalitozoon cuniculi
Length = 204
Score = 76.2 bits (179), Expect = 6e-13
Identities = 39/86 (45%), Positives = 51/86 (59%)
Frame = +3
Query: 258 GFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELII 437
GF Y M+AVY HF IN E I+ ++NFLGEK ++R +M G V ++KD ++I
Sbjct: 104 GFAYTMKAVYNHFSINMEIKEDGKILLVKNFLGEKNVKRFRMR-GAARVRLDERKDTIVI 162
Query: 438 EGNSLEDVSSSAALIQQSTTVKNKIS 515
EG SL DVS SA I KN+ S
Sbjct: 163 EGPSLSDVSQSAGTITNECKAKNRDS 188
Score = 43.2 bits (97), Expect = 0.005
Identities = 26/85 (30%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Frame = +1
Query: 7 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRG-VLKRNFKH-LAVDIRMVNPRLLKVEKW 180
+ +I+ + VK+P+ T + ++ T +GP+G +++ +H L DI N +++ W
Sbjct: 21 LMRILVTRIVKVPEDCTATQEGKIFTFQGPKGSIVEDCTRHPLTFDIHEGN---IRIRLW 77
Query: 181 FGSKKELAAVRTVCSHVENMIKGVT 255
G +K +A TV S + N IK VT
Sbjct: 78 NGKRKAMALAITVESLLRNAIKAVT 102
>UniRef50_Q8U015 Cluster: 50S ribosomal protein L6P; n=14;
Euryarchaeota|Rep: 50S ribosomal protein L6P -
Pyrococcus furiosus
Length = 184
Score = 70.5 bits (165), Expect = 3e-11
Identities = 38/82 (46%), Positives = 55/82 (67%)
Frame = +3
Query: 255 KGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELI 434
+GF YK++ VY+HFPI+ V +G+ +I I NFLGEK R+ K+ PGVTV + E+I
Sbjct: 84 EGFTYKLKVVYSHFPIS-VKVQGDEVI-IENFLGEKAPRKAKILPGVTV---KVRGQEII 138
Query: 435 IEGNSLEDVSSSAALIQQSTTV 500
+EG E V +AA I+Q+T +
Sbjct: 139 VEGIDKEAVGQTAANIEQATRI 160
Score = 59.3 bits (137), Expect = 7e-08
Identities = 32/94 (34%), Positives = 55/94 (58%)
Frame = +1
Query: 28 QKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAA 207
++V+IP+G+ V V+ V VKGP+G L+R F + I + ++ + K F +K++A
Sbjct: 9 EEVEIPEGVEVTVEGYKVKVKGPKGELEREFFWPGIQIFTEDGNVV-IYKDFPRRKDVAI 67
Query: 208 VRTVCSHVENMIKGVTKASNTRCVLCMLTSPLTV 309
RT +H+ NMIKGVT+ + + P++V
Sbjct: 68 ARTFAAHIRNMIKGVTEGFTYKLKVVYSHFPISV 101
>UniRef50_Q5JJG4 Cluster: 50S ribosomal protein L6P; n=3;
Archaea|Rep: 50S ribosomal protein L6P - Pyrococcus
kodakaraensis (Thermococcus kodakaraensis)
Length = 184
Score = 68.5 bits (160), Expect = 1e-10
Identities = 36/94 (38%), Positives = 58/94 (61%)
Frame = +1
Query: 28 QKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAA 207
++++IP+G+ V V+ V VKGP+G L+R K+ V I + +++ + K F KK++A
Sbjct: 9 EEIEIPEGVEVTVEGNTVKVKGPKGELQRELKYPGVQIFTEDGKVV-IYKEFPRKKDVAI 67
Query: 208 VRTVCSHVENMIKGVTKASNTRCVLCMLTSPLTV 309
VRT +H+ NMIKGVT+ R + P+TV
Sbjct: 68 VRTFKAHINNMIKGVTEGFKYRLKVVYSHFPMTV 101
Score = 66.5 bits (155), Expect = 5e-10
Identities = 35/82 (42%), Positives = 54/82 (65%)
Frame = +3
Query: 255 KGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELI 434
+GF+Y+++ VY+HFP+ V +G+ ++ I NFLGEK RR K+ PGVTV + E+
Sbjct: 84 EGFKYRLKVVYSHFPMT-VKVQGDEVV-IENFLGEKNPRRAKILPGVTV---KVKGSEIE 138
Query: 435 IEGNSLEDVSSSAALIQQSTTV 500
+EG E V +AA I+Q+T +
Sbjct: 139 VEGIDKEAVGQTAANIEQATRI 160
>UniRef50_O28370 Cluster: 50S ribosomal protein L6P; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L6P -
Archaeoglobus fulgidus
Length = 196
Score = 64.9 bits (151), Expect = 1e-09
Identities = 34/85 (40%), Positives = 53/85 (62%)
Frame = +3
Query: 255 KGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELI 434
+GF+Y ++ VYAHFPI V EGN +I I NF+GEK+ RR K+ V S + ++
Sbjct: 102 EGFEYHLKVVYAHFPIK-VRVEGNEVI-IENFIGEKHPRRAKIVGRAQVEISGQ---DIY 156
Query: 435 IEGNSLEDVSSSAALIQQSTTVKNK 509
+ G +E+ +AA ++Q+T +K K
Sbjct: 157 VRGIDIEECGQTAANLEQATKIKRK 181
Score = 33.1 bits (72), Expect = 5.2
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Frame = +1
Query: 13 QIVANQKVKIPDGLTVHVKS---RLVTVK--GPRGVLKRNFKHLAVDIRMVNPRLLKVEK 177
++ + V++P+ + + ++ R T+K GP+G R K+ V I + + ++ +V
Sbjct: 17 EVYEERVVEVPEDVQLTIEGDSFRGYTLKAVGPKGENTRYLKYRGVFIEVGDGKV-RVYT 75
Query: 178 WFGSKKELAAVRTVCSHVENMIKGV 252
KK A V T H+EN+I GV
Sbjct: 76 TSPKKKHKAMVGTFAGHIENLITGV 100
>UniRef50_A0RVY9 Cluster: Ribosomal protein L6P/L9E; n=1;
Cenarchaeum symbiosum|Rep: Ribosomal protein L6P/L9E -
Cenarchaeum symbiosum
Length = 165
Score = 64.5 bits (150), Expect = 2e-09
Identities = 34/84 (40%), Positives = 54/84 (64%)
Frame = +3
Query: 258 GFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELII 437
G+ K++ VYAHFPI + +G I+ + NF GE+ R+ K+ G VV+ + +++I+
Sbjct: 69 GYTIKLKVVYAHFPIT-IKQDGAMIL-VENFQGERSARKAKIVGGTKVVS---KGEDVIV 123
Query: 438 EGNSLEDVSSSAALIQQSTTVKNK 509
G+ L DVS +AA ++Q T VKNK
Sbjct: 124 TGHVLTDVSQTAANLEQGTKVKNK 147
>UniRef50_UPI0000DA368E Cluster: PREDICTED: similar to 60S ribosomal
protein L9; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 60S ribosomal protein L9 - Rattus norvegicus
Length = 92
Score = 63.7 bits (148), Expect = 3e-09
Identities = 32/75 (42%), Positives = 46/75 (61%)
Frame = +3
Query: 210 EDSLFTCREHD*RSNKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAP 389
++ L +C EHD GF Y+MR+VYA FP N + E S+IE + +G+KYI RV++
Sbjct: 20 QNHLQSCSEHD---QGGFHYRMRSVYAGFPTNVIIQENGSVIEHWSAMGKKYIHRVQIRT 76
Query: 390 GVTVVNSPKQKDELI 434
V S QK+EL+
Sbjct: 77 SVAFYASQAQKNELM 91
>UniRef50_A2GN76 Cluster: Ribosomal protein L6, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein L6,
putative - Trichomonas vaginalis G3
Length = 197
Score = 62.9 bits (146), Expect = 6e-09
Identities = 34/85 (40%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Frame = +3
Query: 258 GFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTV-VNSPKQKDELI 434
G++YKM VY+HFPI +E + F+G K + V GV + N KDE+
Sbjct: 93 GWRYKMHFVYSHFPIKHTCSEDGRTFDFNGFMGHKEHKIVTAPEGVRIWSNESVAKDEIN 152
Query: 435 IEGNSLEDVSSSAALIQQSTTVKNK 509
IEG +LEDVS I Q T +K+K
Sbjct: 153 IEGANLEDVSLVCGQIHQLTKIKDK 177
Score = 44.4 bits (100), Expect = 0.002
Identities = 28/89 (31%), Positives = 47/89 (52%), Gaps = 7/89 (7%)
Frame = +1
Query: 10 KQIVANQKVKIPDGLTVHVKSRLVTVK--GPR----GVLKRNFKHLAVDIRM-VNPRLLK 168
+ ++ + KIP+ + VKS +VT++ P+ L ++ HL +D N +
Sbjct: 3 RPVLHQEHFKIPENIKCTVKSGVVTIEHQDPKDKKTSKLVKDLSHLKLDFEYDENDHQIV 62
Query: 169 VEKWFGSKKELAAVRTVCSHVENMIKGVT 255
WFG++K LA + T+ V+NMI GVT
Sbjct: 63 ARCWFGNRKLLARIGTLFGIVKNMITGVT 91
>UniRef50_A1RXT3 Cluster: Ribosomal protein L6; n=2;
Thermoprotei|Rep: Ribosomal protein L6 - Thermofilum
pendens (strain Hrk 5)
Length = 191
Score = 61.7 bits (143), Expect = 1e-08
Identities = 34/102 (33%), Positives = 57/102 (55%), Gaps = 1/102 (0%)
Frame = +1
Query: 7 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHL-AVDIRMVNPRLLKVEKWF 183
M+ + + V IP+G+ VHV + V V+GP G ++++F H + IR V + VE +
Sbjct: 1 MRVLQKTESVPIPEGVKVHVNGKRVEVEGPLGKVEKDFSHARRISIR-VEGNSVVVETFH 59
Query: 184 GSKKELAAVRTVCSHVENMIKGVTKASNTRCVLCMLTSPLTV 309
+KK+ A V T+ S + NMI GVTK + + P+++
Sbjct: 60 ATKKDYALVGTIASIINNMIIGVTKGYRYKLKIVYAHFPMSL 101
Score = 61.3 bits (142), Expect = 2e-08
Identities = 35/85 (41%), Positives = 55/85 (64%)
Frame = +3
Query: 255 KGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELI 434
KG++YK++ VYAHFP++ + E + II I NFLGE+ R + PG V +KD++I
Sbjct: 84 KGYRYKLKIVYAHFPMS-LKVEKDKII-IENFLGERGKRIAGIMPGAKV---KIEKDDVI 138
Query: 435 IEGNSLEDVSSSAALIQQSTTVKNK 509
+EG L+ V+ +AA I +T ++ K
Sbjct: 139 VEGIDLDAVAQTAANIHLATHLRGK 163
>UniRef50_A3CT13 Cluster: 50S ribosomal protein L6P; n=2;
Methanomicrobiales|Rep: 50S ribosomal protein L6P -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 174
Score = 61.3 bits (142), Expect = 2e-08
Identities = 35/84 (41%), Positives = 51/84 (60%)
Frame = +3
Query: 258 GFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELII 437
G++Y+M+ VY+HFPI + +GN +EI NFLGEK R K+ GVTV DE+ I
Sbjct: 81 GYEYRMKVVYSHFPIQ-LKQQGNR-LEITNFLGEKQPRIAKIIEGVTVKIG---NDEVTI 135
Query: 438 EGNSLEDVSSSAALIQQSTTVKNK 509
G E V ++AA I+ +T + +
Sbjct: 136 TGIDKEKVGNTAANIEHATRITKR 159
Score = 46.4 bits (105), Expect = 5e-04
Identities = 26/75 (34%), Positives = 44/75 (58%)
Frame = +1
Query: 28 QKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAA 207
++V+IP G+ V + ++TV GP+G L R+ + +D+ MV + V K+ LA
Sbjct: 5 RQVEIPPGVDVTLDGGVLTVSGPKGTLVRDMRFPQIDL-MVEGGEVVVSTASEKKRILAM 63
Query: 208 VRTVCSHVENMIKGV 252
T+ +H +NMI+GV
Sbjct: 64 TGTLEAHAKNMIRGV 78
>UniRef50_UPI000021E22B Cluster: PREDICTED: similar to ribosomal
protein L9; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L9 - Rattus norvegicus
Length = 77
Score = 60.1 bits (139), Expect = 4e-08
Identities = 35/84 (41%), Positives = 52/84 (61%), Gaps = 2/84 (2%)
Frame = +1
Query: 7 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRL--LKVEKW 180
M+ I NQ VKIP+ + +V VK RG L+R+F H+ +++R++ R L+V+KW
Sbjct: 1 MRIIHINQAVKIPEN------AHIVIVKDTRGTLQRDFNHINIELRLLAKRKKQLQVDKW 54
Query: 181 FGSKKELAAVRTVCSHVENMIKGV 252
+ K LA T+ SHV+NMIK V
Sbjct: 55 LKTMK-LATAHTIYSHVQNMIKRV 77
>UniRef50_UPI0000DA3DDB Cluster: PREDICTED: similar to 60S ribosomal
protein L9; n=3; Euarchontoglires|Rep: PREDICTED:
similar to 60S ribosomal protein L9 - Rattus norvegicus
Length = 145
Score = 59.3 bits (137), Expect = 7e-08
Identities = 38/84 (45%), Positives = 49/84 (58%)
Frame = +3
Query: 258 GFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELII 437
GF+YK+R+VYAHFP+N V +M GV S QKDELI+
Sbjct: 52 GFRYKVRSVYAHFPLNVV----------------------QMRTGVACSVSQAQKDELIL 89
Query: 438 EGNSLEDVSSSAALIQQSTTVKNK 509
EGN E VS+SAALIQ++T V+N+
Sbjct: 90 EGNDTELVSNSAALIQKATAVENQ 113
Score = 42.3 bits (95), Expect = 0.008
Identities = 21/43 (48%), Positives = 26/43 (60%)
Frame = +1
Query: 193 KELAAVRTVCSHVENMIKGVTKASNTRCVLCMLTSPLTVSPLR 321
KELA VRT+CSHV+NMIKGV+ + PL V +R
Sbjct: 30 KELATVRTICSHVQNMIKGVSLGFRYKVRSVYAHFPLNVVQMR 72
Score = 32.3 bits (70), Expect = 9.1
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = +2
Query: 509 DIRKFLDGLYVSEKTTV 559
DIRKF+DG+YVSEK T+
Sbjct: 114 DIRKFVDGIYVSEKGTM 130
>UniRef50_O05637 Cluster: 50S ribosomal protein L6P; n=8;
Thermoprotei|Rep: 50S ribosomal protein L6P - Sulfolobus
acidocaldarius
Length = 189
Score = 59.3 bits (137), Expect = 7e-08
Identities = 28/81 (34%), Positives = 53/81 (65%)
Frame = +3
Query: 258 GFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELII 437
G++Y ++ + HFPI+ V G+ + ++ N +GEK IRR K+ PGV V + +++++
Sbjct: 88 GYRYYLKVISTHFPIS-VKVSGDEV-QVSNLIGEKNIRRAKILPGVKVT---VKGEDIVV 142
Query: 438 EGNSLEDVSSSAALIQQSTTV 500
EG+ + +V+ +AA I+ ST +
Sbjct: 143 EGSDIYNVAQTAANIESSTKI 163
Score = 48.0 bits (109), Expect = 2e-04
Identities = 23/82 (28%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Frame = +1
Query: 7 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRM-VNPRLLKVEKWF 183
+K ++++IPD + V +++ ++ VKGP+G + ++F + A IR+ +N + +E F
Sbjct: 4 LKAAYIREEIQIPDKVKVSLENNVLKVKGPKGEVIKDFSY-AKGIRIQLNEGKIILETTF 62
Query: 184 GSKKELAAVRTVCSHVENMIKG 249
+++ A + ++ +H++NMI G
Sbjct: 63 ADRRKKALLYSIIAHIKNMITG 84
>UniRef50_Q8ZVA7 Cluster: 50S ribosomal protein L6P; n=5;
Thermoproteaceae|Rep: 50S ribosomal protein L6P -
Pyrobaculum aerophilum
Length = 196
Score = 57.2 bits (132), Expect = 3e-07
Identities = 31/80 (38%), Positives = 50/80 (62%)
Frame = +3
Query: 255 KGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELI 434
+G++YK++ +Y HFP+ V +GN ++ I NFLG K + + GV V K K++++
Sbjct: 88 RGWRYKLKVIYTHFPM-LVKVQGNQLV-IENFLGRKSKITLNIPKGVKV--EVKGKEDIV 143
Query: 435 IEGNSLEDVSSSAALIQQST 494
IEG E VS+ AA +Q +T
Sbjct: 144 IEGIDRELVSTFAAAVQAAT 163
Score = 41.1 bits (92), Expect = 0.020
Identities = 25/89 (28%), Positives = 52/89 (58%), Gaps = 5/89 (5%)
Frame = +1
Query: 7 MKQIVANQKVKIPDGLTVHVKSR-----LVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKV 171
M+ + + ++V+IP G++V ++ +V VKGP G + + FK+ V + + + +++ +
Sbjct: 1 MRVVYSVEEVEIPKGVSVSIERTGPFDYIVKVKGPLGEVTKEFKNTPVVMSLQDGKIV-M 59
Query: 172 EKWFGSKKELAAVRTVCSHVENMIKGVTK 258
E + K+E A + T ++NM GVT+
Sbjct: 60 EVFKARKREYAILGTYKGILKNMFLGVTR 88
>UniRef50_Q74MR6 Cluster: 50S ribosomal protein L6P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L6P -
Nanoarchaeum equitans
Length = 192
Score = 56.4 bits (130), Expect = 5e-07
Identities = 27/101 (26%), Positives = 55/101 (54%)
Frame = +1
Query: 7 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFG 186
M+ + ++ IP+ + V ++ ++ V GP+G ++R F H + + VN + +E +F
Sbjct: 1 MRIPIIKYEIPIPENVKVSYENNILKVSGPKGEVERKFYHPLIKLS-VNDNKIILETYFA 59
Query: 187 SKKELAAVRTVCSHVENMIKGVTKASNTRCVLCMLTSPLTV 309
+++E + T SH++NM++GV R +C P+ V
Sbjct: 60 TRREKRLINTWRSHIKNMLEGVQNPFVYRLKVCYTHFPMRV 100
Score = 52.0 bits (119), Expect = 1e-05
Identities = 39/112 (34%), Positives = 57/112 (50%), Gaps = 8/112 (7%)
Frame = +3
Query: 198 ACRREDSLF-TCREHD*RSNKGFQ----YKMRAVYAHFPINCVTTEGNSIIEIRNFLGEK 362
A RRE L T R H +G Q Y+++ Y HFP+ V EGN +I + NFLGEK
Sbjct: 59 ATRREKRLINTWRSHIKNMLEGVQNPFVYRLKVCYTHFPMR-VKLEGNKLI-VENFLGEK 116
Query: 363 --YIRRVKMAPGVTV-VNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNK 509
I+ + V V + K + E+++E E A++I+QST +K
Sbjct: 117 APIIKELPYLDKVKVKIEQNKDETEIVVESPDKEKAGIVASMIEQSTRFLHK 168
>UniRef50_Q3LWE8 Cluster: Ribosomal protein L9; n=1; Bigelowiella
natans|Rep: Ribosomal protein L9 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 190
Score = 54.8 bits (126), Expect = 1e-06
Identities = 27/86 (31%), Positives = 45/86 (52%)
Frame = +3
Query: 252 NKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDEL 431
+KGF Y ++ VY+HFPI+ + + +EI N G K I + V V + K E+
Sbjct: 85 SKGFTYLLKIVYSHFPISVKYIQNENTLEITNLFGLKRIDSFFIPSSVQVCTNNLNKKEI 144
Query: 432 IIEGNSLEDVSSSAALIQQSTTVKNK 509
I+ +E + ++LIQ ++ NK
Sbjct: 145 ILLSKDIETLGILSSLIQNKCSINNK 170
Score = 47.6 bits (108), Expect = 2e-04
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Frame = +1
Query: 7 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDI--RMVNPRLLKVEKW 180
MK ++ + +P + + +K + + KG G L + F + V+I + + L V +
Sbjct: 1 MKHVLVQSIINVPKDVKIRIKEKTIYTKGINGELSKKFNNKNVNIIYKKNDSNSLIVRCY 60
Query: 181 FGSKKELAAVRTVCSHVENMIKGVTK 258
+ +K A VRT+ S + NMI GV+K
Sbjct: 61 YNNKSSSAIVRTITSIIYNMIIGVSK 86
>UniRef50_A7DSX9 Cluster: Ribosomal protein L6; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L6
- Candidatus Nitrosopumilus maritimus SCM1
Length = 185
Score = 54.8 bits (126), Expect = 1e-06
Identities = 33/85 (38%), Positives = 50/85 (58%)
Frame = +3
Query: 255 KGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELI 434
+G+ KM+ V+AHFPI V EG I+ I NF GE+ R + V+ PK +D ++
Sbjct: 86 EGYTIKMKVVFAHFPIT-VKVEGKKIL-IENFQGERAPRSTHIMGNTKVI--PKGED-VL 140
Query: 435 IEGNSLEDVSSSAALIQQSTTVKNK 509
+ G D++ +AA I+ +T VKNK
Sbjct: 141 LTGEVWTDITQTAANIELTTKVKNK 165
Score = 43.2 bits (97), Expect = 0.005
Identities = 22/93 (23%), Positives = 50/93 (53%)
Frame = +1
Query: 31 KVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAV 210
+V+IP+G+TV ++ +GP G +NF+++ V I + + + + ++ K++ A +
Sbjct: 12 QVEIPEGVTVTQNKNMLLFEGPLGKTHKNFRNIPVKIEIADGK-VNLKTIGERKRDYAIL 70
Query: 211 RTVCSHVENMIKGVTKASNTRCVLCMLTSPLTV 309
T S + N+ +G+ + + + P+TV
Sbjct: 71 HTARSIIRNICEGLVEGYTIKMKVVFAHFPITV 103
>UniRef50_Q97BW0 Cluster: 50S ribosomal protein L6P; n=1;
Thermoplasma volcanium|Rep: 50S ribosomal protein L6P -
Thermoplasma volcanium
Length = 178
Score = 54.8 bits (126), Expect = 1e-06
Identities = 31/83 (37%), Positives = 53/83 (63%)
Frame = +3
Query: 255 KGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELI 434
+GFQY+M+ Y+HFP+ V+ +G +++ I NF GE+ R ++ G T V+ + D L
Sbjct: 83 EGFQYEMKIDYSHFPMR-VSVKGKTVV-IENFFGERSPRTAEIV-GETQVS--VKGDRLF 137
Query: 435 IEGNSLEDVSSSAALIQQSTTVK 503
+ G S +DV +AA I+++T +K
Sbjct: 138 LNGPSKKDVGETAANIERATIIK 160
>UniRef50_P14135 Cluster: 50S ribosomal protein L6P; n=5;
Halobacteriaceae|Rep: 50S ribosomal protein L6P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 178
Score = 53.2 bits (122), Expect = 5e-06
Identities = 33/85 (38%), Positives = 49/85 (57%)
Frame = +3
Query: 255 KGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELI 434
+G++Y M Y+HFP+ V EG+ ++ I NFLGEK RR + G T V +EL
Sbjct: 79 EGWEYGMEVFYSHFPMQ-VNVEGDEVV-IENFLGEKAPRRTTI-HGDTDVEI--DGEELT 133
Query: 435 IEGNSLEDVSSSAALIQQSTTVKNK 509
+ G +E V +AA I+Q T + +K
Sbjct: 134 VSGPDIEAVGQTAADIEQLTRINDK 158
Score = 36.3 bits (80), Expect = 0.56
Identities = 20/76 (26%), Positives = 40/76 (52%)
Frame = +1
Query: 31 KVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAV 210
+++IP+ + +TV+G G + R + +D+ V+ + +E + K ++ +
Sbjct: 5 ELEIPEDVDAEQDHLDITVEGDNGSVTRRLWYPDIDVS-VDGDTVVIESDEDNAKTMSTI 63
Query: 211 RTVCSHVENMIKGVTK 258
T SH+ENM GVT+
Sbjct: 64 GTFQSHIENMFHGVTE 79
>UniRef50_Q673R2 Cluster: 50S ribosomal protein L6P; n=2;
environmental samples|Rep: 50S ribosomal protein L6P -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 188
Score = 52.4 bits (120), Expect = 8e-06
Identities = 30/88 (34%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Frame = +3
Query: 252 NKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAP--GVTVVNSPKQKD 425
+ GF+YK++AVY+HFP+ + GN + + N GEK + RV P V + K
Sbjct: 83 DSGFEYKLKAVYSHFPMT-IRVNGNQ-MTVTNLFGEK-VPRVAALPWSPAEVEVKVQNKT 139
Query: 426 ELIIEGNSLEDVSSSAALIQQSTTVKNK 509
++ + G E V +AA I++S +KN+
Sbjct: 140 DVTVSGADREKVGQTAANIERSCRIKNR 167
Score = 42.7 bits (96), Expect = 0.006
Identities = 27/93 (29%), Positives = 43/93 (46%)
Frame = +1
Query: 31 KVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAV 210
K+ +P+G+T V VTV L R F+H +++R + L+V KKE A
Sbjct: 10 KISLPEGVTAAVNGNDVTVAKDGNSLTREFRHPRIEVRDSSGE-LEVFVNLPRKKEKALA 68
Query: 211 RTVCSHVENMIKGVTKASNTRCVLCMLTSPLTV 309
T +H+ NM +GV + P+T+
Sbjct: 69 GTWAAHLTNMARGVDSGFEYKLKAVYSHFPMTI 101
>UniRef50_Q6L1B1 Cluster: 50S ribosomal protein L6P; n=3;
Thermoplasmatales|Rep: 50S ribosomal protein L6P -
Picrophilus torridus
Length = 180
Score = 50.0 bits (114), Expect = 4e-05
Identities = 28/84 (33%), Positives = 47/84 (55%)
Frame = +3
Query: 255 KGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELI 434
KGF+Y M+ + HFP+ V+ G+ +I + NFLGEK R K+ G V + D +
Sbjct: 83 KGFEYHMKIDFTHFPMR-VSVRGDKLI-VENFLGEKSPRSAKIVDGCKV---SVKGDRIT 137
Query: 435 IEGNSLEDVSSSAALIQQSTTVKN 506
I G + +AA I+++T +++
Sbjct: 138 INGIDKRKIGETAANIERATYIRH 161
>UniRef50_A4M9T7 Cluster: 50S ribosomal protein L6; n=3;
Thermotogaceae|Rep: 50S ribosomal protein L6 - Petrotoga
mobilis SJ95
Length = 186
Score = 48.8 bits (111), Expect = 1e-04
Identities = 34/86 (39%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Frame = +1
Query: 19 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNF-KHLAVDIRMVNPRLLK----VEKWF 183
+A++ IPDG+ + V + + +KG G L N ++L VD R N ++K V K
Sbjct: 6 IADKPTIIPDGVELSVDGQTIKIKGKNGELSLNLPEYLEVD-RDNNELMIKTKEGVVKRS 64
Query: 184 GSKKELAAVR-TVCSHVENMIKGVTK 258
+K L A+R T SHV NMIKGVT+
Sbjct: 65 SDEKRLKALRGTFTSHVRNMIKGVTE 90
>UniRef50_Q8PV34 Cluster: 50S ribosomal protein L6P; n=4;
Methanomicrobia|Rep: 50S ribosomal protein L6P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 176
Score = 48.8 bits (111), Expect = 1e-04
Identities = 25/92 (27%), Positives = 51/92 (55%)
Frame = +1
Query: 34 VKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVR 213
++IP+G++V + + T KGP+G ++R F + + I + ++ V+ K++ A V
Sbjct: 9 IEIPEGVSVSLSQDVFTAKGPKGTVERTFWYPGIKIEVREGEVV-VDAESSRKEQKAMVG 67
Query: 214 TVCSHVENMIKGVTKASNTRCVLCMLTSPLTV 309
T SH++N+I GV++ + + P+ V
Sbjct: 68 TFASHLKNLIIGVSEGFECKMNIVYAHFPMQV 99
>UniRef50_Q8TW14 Cluster: 50S ribosomal protein L6P; n=3; cellular
organisms|Rep: 50S ribosomal protein L6P - Methanopyrus
kandleri
Length = 204
Score = 47.6 bits (108), Expect = 2e-04
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 KGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMA-PGVTVVNSPKQKDEL 431
+G +YK++ VY+HFP + + I NF+GE R ++ P T V Q ++
Sbjct: 101 EGHEYKLKLVYSHFPPEVKVDQKEGKVYIENFMGENVPRVAEIVDPENTEV--IVQGQDI 158
Query: 432 IIEGNSLEDVSSSAALIQQSTTVKNK 509
I+ G E V +AA ++Q+T +K++
Sbjct: 159 IVRGIDKEAVGQTAANLEQATYIKDR 184
Score = 39.9 bits (89), Expect = 0.045
Identities = 24/86 (27%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Frame = +1
Query: 16 IVANQKVKIPDGLTVHVKSRL-----VTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKW 180
IV ++VKI D + + + R VTVKGP+G + + F + V + + + ++ +
Sbjct: 17 IVMEERVKIKDDVEIEISQREDRRYEVTVKGPKGEVTKEFYYPDVYLWVEDDEVV-IAAT 75
Query: 181 FGSKKELAAVRTVCSHVENMIKGVTK 258
++++ A + + +++ENM KGVT+
Sbjct: 76 RSNRRQKAILGMIKAYIENMQKGVTE 101
>UniRef50_Q661C7 Cluster: 50S ribosomal protein L6; n=9; cellular
organisms|Rep: 50S ribosomal protein L6 - Borrelia
garinii
Length = 180
Score = 46.4 bits (105), Expect = 5e-04
Identities = 27/75 (36%), Positives = 45/75 (60%)
Frame = +1
Query: 34 VKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVR 213
+KIPD + + VK LV V+G RG L ++ K ++++++ N ++ V + F KK A
Sbjct: 9 IKIPDTVKIDVKGNLVIVEGTRGKLVQDIKD-SINVKVENGSVI-VNRAFNDKKTKAYHG 66
Query: 214 TVCSHVENMIKGVTK 258
S + NM+KGVT+
Sbjct: 67 LYRSLIFNMVKGVTE 81
>UniRef50_Q5AEN3 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 140
Score = 45.6 bits (103), Expect = 0.001
Identities = 33/87 (37%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Frame = -1
Query: 509 LILDCSRLLNESSRARDIFQRVAFND*FILLFWRVNDSHTRCHLYPSDVFLTQEVTYLNN 330
L+ D + LLN SS R+ FQ V N+ FILL R T S+ F TQE++ N
Sbjct: 39 LVSDTTDLLNISSILRNSFQGVTRNNQFILLSRRNFHGDTFMDFNFSNSFFTQEISNFNV 98
Query: 329 *ITL--SGDTVNGEVSIHSTHLVLEAF 255
+T+ + VN E+ I+ +HLV F
Sbjct: 99 ILTIFFNNVNVNWEMRINKSHLVFVTF 125
>UniRef50_Q8ETW8 Cluster: 50S ribosomal protein L6; n=40;
Bacteria|Rep: 50S ribosomal protein L6 - Oceanobacillus
iheyensis
Length = 178
Score = 44.4 bits (100), Expect = 0.002
Identities = 28/80 (35%), Positives = 44/80 (55%)
Frame = +1
Query: 19 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 198
V + V+IP+G+ + + + VTVKGP+G L R H + I + +L VE+ K+
Sbjct: 4 VGLKPVEIPEGVELKLDNNTVTVKGPKGELSREL-HPDMKIN-IEDNVLTVERPSDHKEH 61
Query: 199 LAAVRTVCSHVENMIKGVTK 258
A T S + NM+ GV+K
Sbjct: 62 RALHGTTRSLINNMVIGVSK 81
>UniRef50_A0BWM5 Cluster: Chromosome undetermined scaffold_132,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_132,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 167
Score = 44.0 bits (99), Expect = 0.003
Identities = 23/70 (32%), Positives = 42/70 (60%), Gaps = 9/70 (12%)
Frame = +1
Query: 73 RLVTVKGPRGVLKRNFKHLAVDIRMVNP-------RLLKVE--KWFGSKKELAAVRTVCS 225
+L+ + GPRG+L RNFKH ++DI++ L+K+E K+ V+++ +
Sbjct: 53 KLIMIIGPRGILNRNFKHASLDIQVQKEIKEIKQIGLIKIEYQDVVQYSKQRFQVKSIAA 112
Query: 226 HVENMIKGVT 255
++NMI+G+T
Sbjct: 113 QIKNMIRGIT 122
Score = 33.5 bits (73), Expect = 3.9
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +3
Query: 390 GVTVVNSP-KQKDELIIEGNSLEDVSSSAALIQQSTTVKNK 509
GV + ++K+ LI+ N L +VS + ALI Q+ VKNK
Sbjct: 124 GVVITRKEAEEKNVLILSANDLNNVSLTCALIHQACAVKNK 164
>UniRef50_Q48D51 Cluster: 50S ribosomal protein L6; n=6;
Proteobacteria|Rep: 50S ribosomal protein L6 -
Pseudomonas syringae pv. phaseolicola (strain 1448A /
Race 6)
Length = 179
Score = 43.6 bits (98), Expect = 0.004
Identities = 26/81 (32%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Frame = +1
Query: 19 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPR-LLKVEKWFGSKK 195
VA VK+P G+ V + +L++VKGP+G L+ H +V++ +V L+ G ++
Sbjct: 4 VAKNPVKLPSGVEVKLVGQLLSVKGPKGTLEL-IIHSSVEVEIVEEAGELRFAARNGDQQ 62
Query: 196 ELAAVRTVCSHVENMIKGVTK 258
A T + V NM++GV++
Sbjct: 63 TRAMAGTTRALVNNMVQGVSQ 83
>UniRef50_Q6E6D2 Cluster: Large subunit ribosomal protein L9e; n=1;
Antonospora locustae|Rep: Large subunit ribosomal
protein L9e - Antonospora locustae (Nosema locustae)
Length = 160
Score = 41.5 bits (93), Expect = 0.015
Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Frame = +1
Query: 7 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKH--LAVDIRMVNPRL 162
MK+++ +KV+IP+G +V + R++TV+G R R+ H L +D+ + RL
Sbjct: 1 MKRLLCEEKVEIPEGCSVEILERVMTVRGKRATAVRDLSHFVLTMDVHEGHVRL 54
>UniRef50_Q9ZAE4 Cluster: 50S ribosomal protein L6; n=4; cellular
organisms|Rep: 50S ribosomal protein L6 - Thermotoga
maritima
Length = 184
Score = 40.7 bits (91), Expect = 0.026
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Frame = +1
Query: 19 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNF-KHLAVDIR----MVNPRLLKVEKWF 183
+A + + +P G+TV +K +V VKGP+G L + F ++ +++ V P ++ +
Sbjct: 4 LAKKPIVLPQGVTVEIKDNVVKVKGPKGELSQEFLPYVKIEVEGNEVWVRPNEEQIIRKS 63
Query: 184 GSKKELAAVRTVCSHVENMIKGVTK 258
+K T S + NM+ GVT+
Sbjct: 64 DWRKVKMFQGTYWSLIRNMVVGVTE 88
>UniRef50_P46898 Cluster: 50S ribosomal protein L6; n=7;
Bacilli|Rep: 50S ribosomal protein L6 - Bacillus
subtilis
Length = 179
Score = 39.9 bits (89), Expect = 0.045
Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Frame = +1
Query: 19 VANQKVKIPDGLTVHVK-SRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKK 195
V + ++IP +TV + + V VKGP+G L R F H ++I+ V +L V + K+
Sbjct: 4 VGKKLLEIPSDVTVTLNDNNTVAVKGPKGELTRTF-HPDMEIK-VEDNVLTVARPSDQKE 61
Query: 196 ELAAVRTVCSHVENMIKGVTK 258
A T S + NM++GV+K
Sbjct: 62 HRALHGTTRSLLGNMVEGVSK 82
>UniRef50_Q8R7W9 Cluster: 50S ribosomal protein L6; n=22;
Bacteria|Rep: 50S ribosomal protein L6 -
Thermoanaerobacter tengcongensis
Length = 180
Score = 39.5 bits (88), Expect = 0.060
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Frame = +1
Query: 34 VKIPDGLTVHVK-SRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAV 210
+ IP G+ V V +VTVKG +G L++ F + V+I + + ++ K K+E A
Sbjct: 9 IPIPKGVEVKVSPDNVVTVKGAKGTLEKKFPPI-VNIEVRDGEVVVTRKG-DDKEERAMH 66
Query: 211 RTVCSHVENMIKGVTK 258
T + + NM+KGVT+
Sbjct: 67 GTTRAIIANMVKGVTE 82
>UniRef50_A5GIT1 Cluster: 50S ribosomal protein L6; n=7;
Bacteria|Rep: 50S ribosomal protein L6 - Synechococcus
sp. (strain WH7803)
Length = 179
Score = 38.3 bits (85), Expect = 0.14
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Frame = +1
Query: 19 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 198
+ + IPD ++V + VTVKGP+G LKR V + V+ ++ K++
Sbjct: 4 IGKSPIPIPDKVSVSLDGLAVTVKGPKGELKRTLPD-GVTVNQVDNTIVVAPT--SEKRQ 60
Query: 199 LAAVRTVC-SHVENMIKGVTK 258
+C + V NMI+GV+K
Sbjct: 61 SRERHGLCRTLVANMIEGVSK 81
>UniRef50_Q3ZZN4 Cluster: 50S ribosomal protein L6; n=7;
Bacteria|Rep: 50S ribosomal protein L6 - Dehalococcoides
sp. (strain CBDB1)
Length = 182
Score = 38.3 bits (85), Expect = 0.14
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +1
Query: 19 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFK 123
+ +K+P G+ V + VTVKGP+G L R+F+
Sbjct: 4 IGKMPIKVPPGIKVDINGNDVTVKGPKGTLSRSFR 38
>UniRef50_Q9RSL3 Cluster: 50S ribosomal protein L6; n=65; cellular
organisms|Rep: 50S ribosomal protein L6 - Deinococcus
radiodurans
Length = 185
Score = 36.7 bits (81), Expect = 0.42
Identities = 23/79 (29%), Positives = 42/79 (53%)
Frame = +1
Query: 19 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 198
+ Q + +P G+TV+ + + VKGP+G L + + + +R +LL VE+ ++K
Sbjct: 4 IGKQPIAVPSGVTVNAQDGVFKVKGPKGELTVPY-NTELTVRQDGDQLL-VERPSDAQKH 61
Query: 199 LAAVRTVCSHVENMIKGVT 255
A + V N +KGV+
Sbjct: 62 RALHGLTRTLVANAVKGVS 80
>UniRef50_Q83ER1 Cluster: 50S ribosomal protein L6; n=108;
Proteobacteria|Rep: 50S ribosomal protein L6 - Coxiella
burnetii
Length = 178
Score = 36.7 bits (81), Expect = 0.42
Identities = 27/88 (30%), Positives = 41/88 (46%)
Frame = +1
Query: 19 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 198
VA +KIP G+ V+V + +TVKG G L R H AV + + L + S
Sbjct: 5 VAKNPIKIPTGVEVNVAGQQITVKGKLGTLTRVI-HRAVKVTKTDAELQTICA-NDSPGS 62
Query: 199 LAAVRTVCSHVENMIKGVTKASNTRCVL 282
A T + + NM++GV + V+
Sbjct: 63 NALAGTARAVLANMVQGVHTGFQRKLVM 90
>UniRef50_Q7UN05 Cluster: 50S ribosomal protein L6; n=3;
Planctomycetaceae|Rep: 50S ribosomal protein L6 -
Rhodopirellula baltica
Length = 181
Score = 36.3 bits (80), Expect = 0.56
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +1
Query: 19 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKH 126
+ N+ V IP G+TV + R + V+GP+G K +FKH
Sbjct: 4 IGNKPVAIPSGVTVSIADRNIDVEGPKG--KLSFKH 37
>UniRef50_A5LSZ6 Cluster: 50S ribosomal protein L6; n=1;
Streptococcus pneumoniae SP9-BS68|Rep: 50S ribosomal
protein L6 - Streptococcus pneumoniae SP9-BS68
Length = 139
Score = 35.5 bits (78), Expect = 0.97
Identities = 23/80 (28%), Positives = 42/80 (52%)
Frame = +1
Query: 19 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 198
+ N+ + +P G+ + +VTVKGP+G L R F ++IR V + + + SK+
Sbjct: 4 IGNKVIVLPAGVELANNDNVVTVKGPKGELTREFSK-DIEIR-VEGTEITLHRPNDSKEM 61
Query: 199 LAAVRTVCSHVENMIKGVTK 258
T + + NM+ GV++
Sbjct: 62 KTIHGTTRALLNNMVVGVSE 81
>UniRef50_Q8A491 Cluster: 50S ribosomal protein L6; n=34;
Bacteria|Rep: 50S ribosomal protein L6 - Bacteroides
thetaiotaomicron
Length = 189
Score = 35.1 bits (77), Expect = 1.3
Identities = 24/79 (30%), Positives = 45/79 (56%), Gaps = 4/79 (5%)
Frame = +1
Query: 34 VKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVE---KWFGSKKELA 204
+ IP G+TV +K +VTVKGP+G L + + + A+++ + + + E + + K+
Sbjct: 9 ISIPAGVTVTLKDDVVTVKGPKGELSQ-YVNPAINVAIEDGHVTLTENEKEMIDNPKQKH 67
Query: 205 AVRTVC-SHVENMIKGVTK 258
A + S V NM+ GV++
Sbjct: 68 AFHGLYRSLVHNMVVGVSE 86
>UniRef50_Q6YR07 Cluster: 50S ribosomal protein L6; n=16;
Firmicutes|Rep: 50S ribosomal protein L6 - Onion yellows
phytoplasma
Length = 184
Score = 34.7 bits (76), Expect = 1.7
Identities = 21/82 (25%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Frame = +1
Query: 19 VANQKVKIPDGLTVHVKSR-LVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKK 195
V N+ +++P+ + V +K R ++V+GP+G L+ F H + + N + K +
Sbjct: 4 VGNKAIEVPNAVKVDIKDRNFISVEGPKGKLEYQFNH---RLTITNENKVITVKRPNDEI 60
Query: 196 ELAAVR-TVCSHVENMIKGVTK 258
+ + T + + NM++GV+K
Sbjct: 61 FMKKIHGTTRALLSNMVEGVSK 82
>UniRef50_Q11HR7 Cluster: 50S ribosomal protein L6; n=73;
Proteobacteria|Rep: 50S ribosomal protein L6 -
Mesorhizobium sp. (strain BNC1)
Length = 177
Score = 34.7 bits (76), Expect = 1.7
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +1
Query: 19 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLK 111
+ + V +P G+T +V ++VT KGP+G LK
Sbjct: 4 IGKKPVPVPQGVTANVDGQVVTAKGPKGELK 34
>UniRef50_Q4QI55 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 946
Score = 34.3 bits (75), Expect = 2.3
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = -1
Query: 245 LIMFSTCEQTVLTAASSFLDPNHFSTFRRRGFTMRMSTA--KCLKFLLRTPRGPLTVTRR 72
L +F+ C ++V+ A+S L P+H + R GF + TA + FL R PL + R
Sbjct: 22 LELFAACRESVVHVAASHLLPDHVAVTTRNGFVELIDTATGEFRLFLTYLDRIPLDASLR 81
Query: 71 DFT 63
F+
Sbjct: 82 CFS 84
>UniRef50_Q0ID19 Cluster: 50S ribosomal protein L6; n=6;
Bacteria|Rep: 50S ribosomal protein L6 - Synechococcus
sp. (strain CC9311)
Length = 179
Score = 34.3 bits (75), Expect = 2.3
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +1
Query: 19 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 198
+ + IPD + V + VTVKGP+G LKR V + V+ ++ +K+
Sbjct: 4 IGKNPIPIPDKVNVTLSGLAVTVKGPKGELKRTLPS-GVSVNQVDNSIVVAPT--STKRS 60
Query: 199 LAAVRTVC-SHVENMIKGVTK 258
+C + V NM+ GV++
Sbjct: 61 SRERHGLCRTLVANMVIGVSQ 81
>UniRef50_Q6KI40 Cluster: 50S ribosomal protein l6; n=4;
Mycoplasma|Rep: 50S ribosomal protein l6 - Mycoplasma
mobile
Length = 179
Score = 33.9 bits (74), Expect = 3.0
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Frame = +1
Query: 19 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHL-AVDIRMVNPRLLKVEKWFGSKK 195
V + + +P + +++K+ LV +KG GVL N L A+++ + ++ + K
Sbjct: 4 VGRRVLTLPKDVELNIKNNLVEIKGKLGVLTFNVNPLIAIEVENHEVKTIRANE---EKH 60
Query: 196 ELAAVRTVCSHVENMIKGVTK 258
T S +ENMI GV+K
Sbjct: 61 TKQLHGTTNSIIENMIIGVSK 81
>UniRef50_Q2JIL3 Cluster: 50S ribosomal protein L6; n=44; cellular
organisms|Rep: 50S ribosomal protein L6 - Synechococcus
sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria
bacteriumYellowstone B-Prime)
Length = 181
Score = 33.9 bits (74), Expect = 3.0
Identities = 21/89 (23%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Frame = +1
Query: 19 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 198
+ + + +P + + + + + VKGP+G L R+ L + ++ N ++L V + +
Sbjct: 4 IGRRPIALPAKVEIQIDGQHIAVKGPKGQLSRSLPPL-ITVQQ-NAQMLTVSR-LNDSRP 60
Query: 199 LAAVRTVC-SHVENMIKGVTKASNTRCVL 282
+ +C + V NM+ GV+K R L
Sbjct: 61 ARQLHGLCRTLVANMVDGVSKGFERRLEL 89
>UniRef50_Q9A8T8 Cluster: 50S ribosomal protein L6; n=16;
Bacteria|Rep: 50S ribosomal protein L6 - Caulobacter
crescentus (Caulobacter vibrioides)
Length = 177
Score = 33.5 bits (73), Expect = 3.9
Identities = 23/79 (29%), Positives = 37/79 (46%)
Frame = +1
Query: 19 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 198
+ + V IP G+ V + + VTVKGP+G L V+++ LL + +K+
Sbjct: 4 IGKKAVAIPSGVQVTLAGQTVTVKGPKGQLSWTIAD-EVEVKQEGAELLLAPR-VDTKRA 61
Query: 199 LAAVRTVCSHVENMIKGVT 255
+ V NM+ GVT
Sbjct: 62 KGMWGLSRTLVANMVHGVT 80
>UniRef50_Q9ZI38 Cluster: 50S ribosomal protein L6; n=2; Aquifex
pyrophilus|Rep: 50S ribosomal protein L6 - Aquifex
pyrophilus
Length = 187
Score = 33.5 bits (73), Expect = 3.9
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Frame = +1
Query: 67 KSRLVTVKGPRGVLKRNFKHLAVDIRM-VNPRLLKVEKWFGSKKELAAVRTVCSHVENMI 243
K VTV+GP+G L+ N H + + + R +K+++ A T+ + ++NMI
Sbjct: 22 KEHKVTVEGPKGKLELNI-HPDIKVTLNQQERWIKLDRPSDRSFHKAIHGTMAALIKNMI 80
Query: 244 KGVTK 258
KGVT+
Sbjct: 81 KGVTE 85
>UniRef50_Q8TMD2 Cluster: Putative uncharacterized protein; n=3;
Euryarchaeota|Rep: Putative uncharacterized protein -
Methanosarcina acetivorans
Length = 255
Score = 33.1 bits (72), Expect = 5.2
Identities = 21/65 (32%), Positives = 33/65 (50%)
Frame = +3
Query: 324 NSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVK 503
+SI + NF +K+ R V + PGV V +S + KDE G DV + +Q T+
Sbjct: 51 SSIGQAENFSRKKFFRGVVLPPGVPVTSSGRIKDETGFPG----DVVIKDGIWKQGKTIF 106
Query: 504 NKISE 518
N + +
Sbjct: 107 NVVDD 111
>UniRef50_O67565 Cluster: 50S ribosomal protein L6; n=1; Aquifex
aeolicus|Rep: 50S ribosomal protein L6 - Aquifex
aeolicus
Length = 183
Score = 33.1 bits (72), Expect = 5.2
Identities = 23/83 (27%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Frame = +1
Query: 19 VANQKVKIPDGLTVHV--KSRLVTVKGPRGVLKRNFKHLAVDIRM-VNPRLLKVEKWFGS 189
+A + + P+ + V+ K + V+GP+G L+ N H + + + R +K+++
Sbjct: 4 LAKKPIPYPENVKVNYVEKEHKIVVEGPKGKLELNV-HPDIKVTVNQQERWIKLDRPTDR 62
Query: 190 KKELAAVRTVCSHVENMIKGVTK 258
A T+ + V+NMIKGVT+
Sbjct: 63 SFHKAIHGTMAALVKNMIKGVTE 85
>UniRef50_Q2PRK5 Cluster: Odorant receptor; n=4; Danio rerio|Rep:
Odorant receptor - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 319
Score = 32.7 bits (71), Expect = 6.9
Identities = 22/102 (21%), Positives = 51/102 (50%), Gaps = 5/102 (4%)
Frame = -2
Query: 601 YYYTYLMFLYVI--*HNSCFLRYIKTIQELSDILFLTVVDC*MRAAELETSSKELPSMIS 428
YYY +L F+Y+I NSC + I + L ++ V + + ++ S+ +P ++
Sbjct: 30 YYYIFLFFIYIITVLGNSCLMSVIIMDRNLHTPKYIAVFN--LSLTDICESTAVIPQLL- 86
Query: 427 SSFCFGELTT---VTPGAIFTLLMYFSPKKLRISIIELPSVV 311
+F FG + ++F++L++ + + L ++++ V
Sbjct: 87 DTFLFGNQMMPYGLCMSSMFSVLLFLAMQSLTLTVLSFDRFV 128
>UniRef50_A0DZ50 Cluster: Citrate synthase; n=6; Paramecium
tetraurelia|Rep: Citrate synthase - Paramecium
tetraurelia
Length = 459
Score = 32.7 bits (71), Expect = 6.9
Identities = 28/111 (25%), Positives = 47/111 (42%), Gaps = 1/111 (0%)
Frame = -1
Query: 560 QQLFSQIHKDHPRTF*YLILDCSRLLNESSRARDIFQRVAF-ND*FILLFWRVNDSHTRC 384
QQ++ Q P+ + Y D LL + R + R + N I ++ +
Sbjct: 173 QQVYDQGKVSKPQYWEYFYEDAMDLLAKIPRVAALIYRHKYKNGEIISADDNLDWAGNYA 232
Query: 383 HLYPSDVFLTQEVTYLNN*ITLSGDTVNGEVSIHSTHLVLEAFVTPLIMFS 231
H+ + F +E L +++ D G VS H+THLV A P + +S
Sbjct: 233 HMLGYNKFEVREC--LRGYLSIHADHEGGNVSAHTTHLVGSALADPYLSYS 281
>UniRef50_Q9ZCS0 Cluster: 50S ribosomal protein L6; n=10;
Rickettsieae|Rep: 50S ribosomal protein L6 - Rickettsia
prowazekii
Length = 177
Score = 32.7 bits (71), Expect = 6.9
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = +1
Query: 19 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFK-HLAVDIRMVNPRLLKVEKWFGSKK 195
V + IP+G+ V + V + GP+G L + FK ++A+ ++ L V+ +K
Sbjct: 4 VGKLPITIPEGVKVGLNDLEVKISGPKGELSKTFKGNIAI---IMEENKLVVKPLAVNKN 60
Query: 196 ELAAVRTVCSHVENMIKGV 252
A T S + NMI GV
Sbjct: 61 ARAMWGTARSIICNMITGV 79
>UniRef50_Q7VQD3 Cluster: 50S ribosomal subunit protein L6; n=2;
Candidatus Blochmannia|Rep: 50S ribosomal subunit
protein L6 - Blochmannia floridanus
Length = 181
Score = 32.3 bits (70), Expect = 9.1
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Frame = +1
Query: 7 MKQIVANQKVK-IPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWF 183
M+QI + + IP+ + + ++ + V G G L F H + ++ N + L V +
Sbjct: 1 MEQISGYKSIICIPNEIQITIQDCCILVVGVLGNLSYKF-HNFIGVQFSNVKNLIVYSRY 59
Query: 184 GSKKELAAVRTVCSHVENMIKGVTK 258
+ A + T CS + +MI GVT+
Sbjct: 60 RNHVNRALLGTTCSLINSMIVGVTE 84
>UniRef50_Q98PZ7 Cluster: 50S ribosomal protein L6; n=29;
Bacteria|Rep: 50S ribosomal protein L6 - Mycoplasma
pulmonis
Length = 179
Score = 32.3 bits (70), Expect = 9.1
Identities = 24/80 (30%), Positives = 38/80 (47%)
Frame = +1
Query: 19 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 198
V + ++IP G V + VKG G L R F V+I+ N + + VE+ K
Sbjct: 4 VGKRIIQIPSGTEVKIDGSFFEVKGKLGSLSRLFSPF-VNIKHENNQ-ISVERLNELKPT 61
Query: 199 LAAVRTVCSHVENMIKGVTK 258
T + + NM+KGV++
Sbjct: 62 KQLHGTTNALIANMVKGVSE 81
>UniRef50_Q5FM76 Cluster: 50S ribosomal protein L6; n=10;
Firmicutes|Rep: 50S ribosomal protein L6 - Lactobacillus
acidophilus
Length = 176
Score = 32.3 bits (70), Expect = 9.1
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +1
Query: 34 VKIPDGLTVHVKSRLVTVKGPRGVLKRNF 120
+++PD +TV + +TVKGP+G L R F
Sbjct: 9 IEVPDSVTVTKEGDNITVKGPKGELTRYF 37
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 603,877,830
Number of Sequences: 1657284
Number of extensions: 12194313
Number of successful extensions: 30444
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 29529
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30404
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 42732687689
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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