Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30828
(658 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P08865 Cluster: 40S ribosomal protein SA; n=242; Eukary... 156 4e-37
UniRef50_Q4KTE2 Cluster: SA; n=2; Fungi/Metazoa group|Rep: SA - ... 143 4e-33
UniRef50_UPI0000E20E16 Cluster: PREDICTED: similar to 33 kDa pro... 135 1e-30
UniRef50_Q9XZ65 Cluster: Laminin receptor-like protein/ p40 ribo... 124 1e-27
UniRef50_P32905 Cluster: 40S ribosomal protein S0-A; n=23; Fungi... 123 4e-27
UniRef50_Q08682 Cluster: 40S ribosomal protein Sa-1; n=19; Magno... 122 6e-27
UniRef50_P46770 Cluster: 40S ribosomal protein SA; n=1; Echinoco... 122 8e-27
UniRef50_Q7QWF5 Cluster: GLP_336_16528_17265; n=1; Giardia lambl... 118 1e-25
UniRef50_Q4N1J1 Cluster: 40S ribosomal protein SA, putative; n=1... 117 2e-25
UniRef50_Q9Y7L8 Cluster: 40S ribosomal protein S0-A; n=11; Ascom... 117 3e-25
UniRef50_Q0DUK0 Cluster: Os03g0182600 protein; n=1; Oryza sativa... 115 9e-25
UniRef50_A2FLG0 Cluster: Ribosomal protein, putative; n=7; Trich... 109 4e-23
UniRef50_Q01CH5 Cluster: B1056G08.113 gene product; n=6; Eukaryo... 107 2e-22
UniRef50_A0ECJ9 Cluster: Chromosome undetermined scaffold_9, who... 99 1e-19
UniRef50_Q9U5P8 Cluster: Putative uncharacterized protein; n=1; ... 98 1e-19
UniRef50_A7NTT5 Cluster: Chromosome chr18 scaffold_1, whole geno... 96 6e-19
UniRef50_Q9AW71 Cluster: 40S ribosomal protein SSA; n=1; Guillar... 96 8e-19
UniRef50_A1RWV4 Cluster: Ribosomal protein S2; n=2; Archaea|Rep:... 92 1e-17
UniRef50_P95993 Cluster: 30S ribosomal protein S2P; n=13; Archae... 85 1e-15
UniRef50_A3H8R8 Cluster: Ribosomal protein S2; n=1; Caldivirga m... 84 2e-15
UniRef50_UPI0000EB0B97 Cluster: UPI0000EB0B97 related cluster; n... 77 3e-13
UniRef50_P57712 Cluster: 30S ribosomal protein S2P; n=2; Thermop... 77 3e-13
UniRef50_Q8TT39 Cluster: 30S ribosomal protein S2P; n=10; Euryar... 77 3e-13
UniRef50_A0RY14 Cluster: Ribosomal protein S2; n=2; Thermoprotei... 75 1e-12
UniRef50_P54109 Cluster: 30S ribosomal protein S2P; n=10; Euryar... 75 1e-12
UniRef50_Q74M65 Cluster: NEQ508; n=1; Nanoarchaeum equitans|Rep:... 71 2e-11
UniRef50_O15585 Cluster: Ribosomal protein SA (P40) / laminin re... 71 2e-11
UniRef50_P29202 Cluster: 30S ribosomal protein S2P; n=12; Euryar... 70 4e-11
UniRef50_Q3LVY7 Cluster: Ribosomal RNA S0; n=1; Bigelowiella nat... 65 1e-09
UniRef50_Q8SS60 Cluster: 40S RIBOSOMAL PROTEIN SA or P40; n=1; E... 64 3e-09
UniRef50_Q6PDB3 Cluster: LOC204010 protein; n=2; Eutheria|Rep: L... 60 5e-08
UniRef50_Q9PRB9 Cluster: 30S ribosomal protein S2; n=1; Ureaplas... 58 2e-07
UniRef50_P75560 Cluster: 30S ribosomal protein S2; n=4; Mycoplas... 57 4e-07
UniRef50_UPI0000EB1146 Cluster: UPI0000EB1146 related cluster; n... 56 1e-06
UniRef50_Q7NAW2 Cluster: RpsB; n=1; Mycoplasma gallisepticum|Rep... 54 4e-06
UniRef50_Q8EUG1 Cluster: Ribosomal protein S2; n=1; Mycoplasma p... 53 7e-06
UniRef50_Q4P1B8 Cluster: Putative uncharacterized protein; n=1; ... 52 1e-05
UniRef50_A3AIV8 Cluster: Putative uncharacterized protein; n=1; ... 51 3e-05
UniRef50_P19679 Cluster: 30S ribosomal protein S2; n=3; Firmicut... 49 9e-05
UniRef50_Q4GXR5 Cluster: Ribosomal protein SAe; n=2; Adephaga|Re... 48 2e-04
UniRef50_Q5A8K1 Cluster: Likely mitochondrial ribosomal protein;... 48 3e-04
UniRef50_Q9ZE61 Cluster: 30S ribosomal protein S2; n=10; Rickett... 48 3e-04
UniRef50_Q98Q36 Cluster: 30S ribosomal protein S2; n=2; Mycoplas... 48 3e-04
UniRef50_Q6F0Q4 Cluster: 30S ribosomal protein S2; n=4; Mollicut... 48 3e-04
UniRef50_Q9RU79 Cluster: 30S ribosomal protein S2; n=7; Bacteria... 48 3e-04
UniRef50_Q862Y3 Cluster: Similar to C10 protein; n=3; Eutheria|R... 47 5e-04
UniRef50_Q9TCC3 Cluster: Ribosomal protein S2; n=1; Nephroselmis... 46 6e-04
UniRef50_UPI0000E48DD5 Cluster: PREDICTED: similar to 34/67 kD l... 46 8e-04
UniRef50_Q1AW68 Cluster: Ribosomal protein S2; n=3; Bacteria|Rep... 46 0.001
UniRef50_Q6BNP9 Cluster: Debaryomyces hansenii chromosome E of s... 46 0.001
UniRef50_P32902 Cluster: 37S ribosomal protein MRP4, mitochondri... 46 0.001
UniRef50_Q9TM33 Cluster: Chloroplast 30S ribosomal protein S2; n... 46 0.001
UniRef50_O84687 Cluster: 30S ribosomal protein S2; n=32; Chlamyd... 45 0.001
UniRef50_Q7NJK2 Cluster: 30S ribosomal protein S2; n=154; cellul... 45 0.002
UniRef50_Q7UKH4 Cluster: 30S ribosomal protein S2; n=3; Planctom... 44 0.002
UniRef50_Q6MGY6 Cluster: 30S ribosomal protein S2; n=3; Deltapro... 44 0.004
UniRef50_Q88VJ4 Cluster: 30S ribosomal protein S2; n=5; Bacteria... 44 0.004
UniRef50_Q3B5U0 Cluster: Ribosomal protein S2; n=1; Pelodictyon ... 42 0.010
UniRef50_Q8KBK6 Cluster: 30S ribosomal protein S2; n=3; Bacteria... 42 0.010
UniRef50_A6EB55 Cluster: 30S ribosomal subunit protein S2; n=3; ... 42 0.013
UniRef50_A5IY48 Cluster: 30S ribosomal protein S2; n=8; Mycoplas... 42 0.013
UniRef50_A3ZXT5 Cluster: Ribosomal protein S2; n=1; Blastopirell... 42 0.013
UniRef50_A1B8E9 Cluster: Ribosomal protein S2; n=5; Bacteria|Rep... 42 0.013
UniRef50_Q8JIE5 Cluster: 67kD laminin receptor/ribosomal protein... 42 0.017
UniRef50_O13970 Cluster: Mitochondrial ribosomal protein subunit... 42 0.017
UniRef50_A6YEB6 Cluster: Ribosomal protein S2; n=1; Chlorokybus ... 41 0.023
UniRef50_A6GAK0 Cluster: Ribosomal protein S2; n=2; Deltaproteob... 41 0.030
UniRef50_A3HWY0 Cluster: 30S ribosomal protein S2; n=1; Algoriph... 41 0.030
UniRef50_Q7MX41 Cluster: 30S ribosomal protein S2; n=23; Bactero... 41 0.030
UniRef50_Q2GCI4 Cluster: Ribosomal protein S2; n=1; Neorickettsi... 40 0.040
UniRef50_Q6YR51 Cluster: 30S ribosomal protein S2; n=2; Candidat... 40 0.069
UniRef50_Q5YS61 Cluster: 30S ribosomal protein S2; n=60; Bacteri... 40 0.069
UniRef50_Q6E782 Cluster: Ribosomal protein S2; n=4; Oomycetes|Re... 39 0.092
UniRef50_A5BFJ2 Cluster: Putative uncharacterized protein; n=1; ... 38 0.16
UniRef50_Q4P627 Cluster: Putative uncharacterized protein; n=1; ... 38 0.16
UniRef50_Q83SL4 Cluster: 30S ribosomal protein S2; n=330; Bacter... 38 0.16
UniRef50_O78482 Cluster: Chloroplast 30S ribosomal protein S2; n... 38 0.16
UniRef50_Q6Q8T9 Cluster: Predicted 30S ribosomal protein S2; n=1... 38 0.21
UniRef50_A7H716 Cluster: Ribosomal protein S2; n=5; Bacteria|Rep... 38 0.21
UniRef50_P66546 Cluster: 30S ribosomal protein S2; n=32; cellula... 38 0.21
UniRef50_Q8M1D9 Cluster: Ribosomal protein S2; n=1; Chaetosphaer... 38 0.28
UniRef50_UPI0000DD86B9 Cluster: PREDICTED: similar to 40S riboso... 37 0.37
UniRef50_Q39F43 Cluster: Ribosomal protein S2; n=11; Proteobacte... 37 0.37
UniRef50_A1ZN20 Cluster: Ribosomal protein S2; n=6; Bacteroidete... 37 0.37
UniRef50_Q6N5Q2 Cluster: 30S ribosomal protein S2; n=95; Bacteri... 37 0.37
UniRef50_Q1MRE3 Cluster: Ribosomal protein S2; n=4; Bacteria|Rep... 37 0.49
UniRef50_Q2UN92 Cluster: Mitochondrial/chloroplast ribosomal pro... 37 0.49
UniRef50_P06354 Cluster: Chloroplast 30S ribosomal protein S2; n... 37 0.49
UniRef50_A7Q681 Cluster: Chromosome undetermined scaffold_55, wh... 36 0.65
UniRef50_A5BWW8 Cluster: Putative uncharacterized protein; n=1; ... 36 0.65
UniRef50_Q0P3M3 Cluster: Rps2 protein; n=1; Ostreococcus tauri|R... 36 0.86
UniRef50_P56797 Cluster: Chloroplast 30S ribosomal protein S2; n... 36 0.86
UniRef50_UPI00015531E2 Cluster: PREDICTED: similar to Ribosomal ... 36 1.1
UniRef50_A1AXW9 Cluster: Ribosomal protein S2; n=1; Candidatus R... 36 1.1
UniRef50_A4R5S3 Cluster: Putative uncharacterized protein; n=1; ... 35 1.5
UniRef50_Q1V2V1 Cluster: Probable 30S ribosomal protein S2; n=2;... 35 2.0
UniRef50_Q1K325 Cluster: Ribosomal protein S2; n=6; Bacteria|Rep... 35 2.0
UniRef50_Q5KI10 Cluster: Ribosomal protein, putative; n=1; Filob... 35 2.0
UniRef50_P46741 Cluster: Mitochondrial ribosomal protein S2; n=1... 35 2.0
UniRef50_UPI00005A3143 Cluster: PREDICTED: similar to 40S riboso... 34 2.6
UniRef50_UPI000023ED36 Cluster: hypothetical protein FG06308.1; ... 34 2.6
UniRef50_Q9GCB8 Cluster: Ribosomal protein S2; n=13; Magnoliophy... 34 2.6
UniRef50_Q0U871 Cluster: Putative uncharacterized protein; n=2; ... 34 2.6
UniRef50_A6R797 Cluster: Putative uncharacterized protein; n=1; ... 34 2.6
UniRef50_O21288 Cluster: Ribosomal protein S2; n=1; Reclinomonas... 34 3.5
UniRef50_Q874M6 Cluster: SWI6; n=3; Saccharomycetales|Rep: SWI6 ... 34 3.5
UniRef50_P46753 Cluster: Mitochondrial ribosomal protein S2; n=1... 33 4.6
UniRef50_Q02AL1 Cluster: Ribosomal protein S2; n=1; Solibacter u... 33 6.0
UniRef50_UPI0000DB6E6C Cluster: PREDICTED: similar to Cdk5 activ... 33 8.0
>UniRef50_P08865 Cluster: 40S ribosomal protein SA; n=242;
Eukaryota|Rep: 40S ribosomal protein SA - Homo sapiens
(Human)
Length = 295
Score = 156 bits (379), Expect = 4e-37
Identities = 67/84 (79%), Positives = 76/84 (90%)
Frame = +1
Query: 4 FTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKS 183
FTNQIQAAFREPRLL+V DP DHQP+TEASYVN+P IALCNTDSPLR+VDIAIPCN K
Sbjct: 108 FTNQIQAAFREPRLLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKG 167
Query: 184 SHSIGLMWWLLAREVLRLRGVLPR 255
+HS+GLMWW+LAREVLR+RG + R
Sbjct: 168 AHSVGLMWWMLAREVLRMRGTISR 191
Score = 41.9 bits (94), Expect = 0.013
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +3
Query: 249 SPDQRWDVVVXLFFYRDPEESEKDEQQAKEQ-XXXXXXXXXXXXXHEDWNETLEPVASWA 425
S + W+V+ L+FYRDPEE EK+EQ A E+ ++ T VA W+
Sbjct: 190 SREHPWEVMPDLYFYRDPEEIEKEEQAAAEKAVTKEEFQGEWTAPAPEFTATQPEVADWS 249
Query: 426 E 428
E
Sbjct: 250 E 250
>UniRef50_Q4KTE2 Cluster: SA; n=2; Fungi/Metazoa group|Rep: SA -
Suberites domuncula (Sponge)
Length = 325
Score = 143 bits (346), Expect = 4e-33
Identities = 63/84 (75%), Positives = 71/84 (84%)
Frame = +1
Query: 4 FTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKS 183
FTNQIQ AFREPRLLIV D DHQPITEA+YVNIPVIA CNT+SPLR++D+AIPCN
Sbjct: 108 FTNQIQKAFREPRLLIVSDARSDHQPITEAAYVNIPVIAFCNTNSPLRYIDVAIPCNNMG 167
Query: 184 SHSIGLMWWLLAREVLRLRGVLPR 255
+S+GLMWWLL REVLRLRG + R
Sbjct: 168 KNSLGLMWWLLCREVLRLRGTISR 191
Score = 39.5 bits (88), Expect = 0.069
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +3
Query: 264 WDVVVXLFFYRDPEESEKDEQQAKE 338
W+V+ LFFYRDPEE EK+EQ E
Sbjct: 195 WEVMPDLFFYRDPEEVEKEEQAKAE 219
>UniRef50_UPI0000E20E16 Cluster: PREDICTED: similar to 33 kDa
protein; n=4; Eutheria|Rep: PREDICTED: similar to 33 kDa
protein - Pan troglodytes
Length = 355
Score = 135 bits (326), Expect = 1e-30
Identities = 58/84 (69%), Positives = 69/84 (82%)
Frame = +1
Query: 4 FTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKS 183
FT+QIQAAFREPRL +V DP DHQP+ EASYVN+P IALCNTDSPL +VDIAIPCN K
Sbjct: 188 FTSQIQAAFREPRLPVVTDPRVDHQPLMEASYVNLPTIALCNTDSPLCYVDIAIPCNNKG 247
Query: 184 SHSIGLMWWLLAREVLRLRGVLPR 255
+HS+G+MWW+L EV R+ G + R
Sbjct: 248 AHSVGVMWWMLVPEVRRISGTISR 271
Score = 37.1 bits (82), Expect = 0.37
Identities = 21/56 (37%), Positives = 29/56 (51%)
Frame = +3
Query: 174 HQVFPLYWFDVVVVGT*SAEASWCASPDQRWDVVVXLFFYRDPEESEKDEQQAKEQ 341
H V ++W V V S S + W+V+ FYRDPEE EK++Q A E+
Sbjct: 249 HSVGVMWWMLVPEV----RRISGTISREHPWEVMTDPCFYRDPEEIEKEKQAAAEK 300
>UniRef50_Q9XZ65 Cluster: Laminin receptor-like protein/ p40
ribosome associated-like protein; n=7; Trypanosoma|Rep:
Laminin receptor-like protein/ p40 ribosome
associated-like protein - Trypanosoma cruzi
Length = 298
Score = 124 bits (300), Expect = 1e-27
Identities = 56/85 (65%), Positives = 67/85 (78%)
Frame = +1
Query: 4 FTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKS 183
FTNQIQ F +PR+L+V DP D Q EAS VNIPVIA C+TD+PL FVDIAIPCN +
Sbjct: 128 FTNQIQKKFMQPRVLLVTDPRTDQQAFREASLVNIPVIAFCDTDAPLEFVDIAIPCNDRR 187
Query: 184 SHSIGLMWWLLAREVLRLRGVLPRT 258
+SI +M+WLLAREVLRLRG +PR+
Sbjct: 188 RYSISMMYWLLAREVLRLRGTIPRS 212
Score = 37.1 bits (82), Expect = 0.37
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = +3
Query: 264 WDVVVXLFFYRDPEESEKDEQ 326
WDV V LFFYRDPEE+ K E+
Sbjct: 215 WDVKVDLFFYRDPEEALKHEE 235
>UniRef50_P32905 Cluster: 40S ribosomal protein S0-A; n=23;
Fungi/Metazoa group|Rep: 40S ribosomal protein S0-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 252
Score = 123 bits (296), Expect = 4e-27
Identities = 57/83 (68%), Positives = 66/83 (79%)
Frame = +1
Query: 1 AFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTK 180
+FTN I +F+EPRL+IV DP D Q I EASYVNIPVIAL + DSP FVD+AIPCN +
Sbjct: 106 SFTNYITRSFKEPRLVIVTDPRSDAQAIKEASYVNIPVIALTDLDSPSEFVDVAIPCNNR 165
Query: 181 SSHSIGLMWWLLAREVLRLRGVL 249
HSIGL+W+LLAREVLRLRG L
Sbjct: 166 GKHSIGLIWYLLAREVLRLRGAL 188
>UniRef50_Q08682 Cluster: 40S ribosomal protein Sa-1; n=19;
Magnoliophyta|Rep: 40S ribosomal protein Sa-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 298
Score = 122 bits (295), Expect = 6e-27
Identities = 55/93 (59%), Positives = 69/93 (74%)
Frame = +1
Query: 4 FTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKS 183
FTNQ+Q +F EPRLLI+ DP DHQPI E + NIP+IA C+TDSP+RFVDI IP N K
Sbjct: 112 FTNQMQTSFSEPRLLILTDPRTDHQPIKEGALGNIPIIAFCDTDSPMRFVDIGIPANNKG 171
Query: 184 SHSIGLMWWLLAREVLRLRGVLPRTSAGMLWXI 282
HSIG ++WLLAR VL++RG + +AG W +
Sbjct: 172 KHSIGCLFWLLARMVLQMRGTI---AAGQKWDV 201
Score = 40.3 bits (90), Expect = 0.040
Identities = 17/29 (58%), Positives = 24/29 (82%), Gaps = 1/29 (3%)
Frame = +3
Query: 258 QRWDVVVXLFFYRDPEESE-KDEQQAKEQ 341
Q+WDV+V LFFYR+PEE++ +DE +A Q
Sbjct: 197 QKWDVMVDLFFYREPEETKPEDEDEAGPQ 225
>UniRef50_P46770 Cluster: 40S ribosomal protein SA; n=1;
Echinococcus granulosus|Rep: 40S ribosomal protein SA -
Echinococcus granulosus
Length = 268
Score = 122 bits (294), Expect = 8e-27
Identities = 58/89 (65%), Positives = 67/89 (75%)
Frame = +1
Query: 1 AFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTK 180
AFTNQIQ+ F+EPRLLIV DP DHQP+ E S VNIPVI CNTDSPL+ VDI IPCN
Sbjct: 107 AFTNQIQSGFKEPRLLIVCDPKGDHQPVREGSAVNIPVIGFCNTDSPLQCVDIGIPCN-N 165
Query: 181 SSHSIGLMWWLLAREVLRLRGVLPRTSAG 267
+SI LM W+LAREV R+ G+ PR+ G
Sbjct: 166 DKYSIALMLWMLAREVRRIWGLDPRSQPG 194
>UniRef50_Q7QWF5 Cluster: GLP_336_16528_17265; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_336_16528_17265 - Giardia lamblia
ATCC 50803
Length = 245
Score = 118 bits (284), Expect = 1e-25
Identities = 53/85 (62%), Positives = 68/85 (80%)
Frame = +1
Query: 4 FTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKS 183
FTN++ + EPRLL+V DP D Q I EASYVNIP I+LCN+D+ L+F+D+AIPCN K+
Sbjct: 113 FTNRMNPNYCEPRLLLVNDPVVDRQAILEASYVNIPTISLCNSDANLKFIDVAIPCNNKT 172
Query: 184 SHSIGLMWWLLAREVLRLRGVLPRT 258
SIGL++WLLAREVLRL+G + RT
Sbjct: 173 PMSIGLIYWLLAREVLRLKGSISRT 197
>UniRef50_Q4N1J1 Cluster: 40S ribosomal protein SA, putative; n=11;
Apicomplexa|Rep: 40S ribosomal protein SA, putative -
Theileria parva
Length = 274
Score = 117 bits (282), Expect = 2e-25
Identities = 59/109 (54%), Positives = 71/109 (65%)
Frame = +1
Query: 7 TNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSS 186
TNQI F EPRLL+ DP D Q + E+SYV++PVIALC+TDSPL +VDIAIPCN K
Sbjct: 109 TNQITQKFIEPRLLVATDPRTDAQSLRESSYVSLPVIALCDTDSPLNYVDIAIPCNNKGK 168
Query: 187 HSIGLMWWLLAREVLRLRGVLPRTSAGMLWXICSSTVTLKKVKRMNNKP 333
SI LM+WLLAREVL LR L R M W + T + ++ KP
Sbjct: 169 ESIALMYWLLAREVLYLRDQLKR---WMPWDVLVDTFFWRDPEQFEQKP 214
>UniRef50_Q9Y7L8 Cluster: 40S ribosomal protein S0-A; n=11;
Ascomycota|Rep: 40S ribosomal protein S0-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 292
Score = 117 bits (281), Expect = 3e-25
Identities = 56/86 (65%), Positives = 66/86 (76%)
Frame = +1
Query: 4 FTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKS 183
FTN I +REPRL++V DP D Q I EAS+VNIPVIALC+TDS L VDIAIP N K
Sbjct: 110 FTNYITRTYREPRLIVVTDPRADAQAIKEASFVNIPVIALCDTDSILNHVDIAIPTNNKG 169
Query: 184 SHSIGLMWWLLAREVLRLRGVLPRTS 261
SIGL+W+LLAREVLR+RG L R++
Sbjct: 170 RKSIGLIWYLLAREVLRVRGTLSRSA 195
Score = 37.9 bits (84), Expect = 0.21
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = +3
Query: 264 WDVVVXLFFYRDPEESEKDEQQAK 335
WDV+ L+FYRDPEE E++E+ K
Sbjct: 197 WDVMPDLYFYRDPEEVEREEEAKK 220
>UniRef50_Q0DUK0 Cluster: Os03g0182600 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os03g0182600 protein -
Oryza sativa subsp. japonica (Rice)
Length = 223
Score = 115 bits (277), Expect = 9e-25
Identities = 52/84 (61%), Positives = 66/84 (78%), Gaps = 1/84 (1%)
Frame = +1
Query: 4 FTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKS 183
FTNQ+Q +F EPRLLI+ DP DHQPI E++ NIP IA C+TDSP+R+VDI IP N K
Sbjct: 30 FTNQLQTSFSEPRLLILTDPRTDHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKG 89
Query: 184 SHSIGLMWWLLAREVLRLRG-VLP 252
+SIG ++WLLAR VL++RG +LP
Sbjct: 90 RNSIGCLFWLLARMVLQMRGTILP 113
Score = 45.6 bits (103), Expect = 0.001
Identities = 17/30 (56%), Positives = 24/30 (80%)
Frame = +3
Query: 252 PDQRWDVVVXLFFYRDPEESEKDEQQAKEQ 341
P +WDV+V LFFYRDPEE+++ E++A Q
Sbjct: 113 PGHKWDVMVDLFFYRDPEEAKEQEEEAPAQ 142
>UniRef50_A2FLG0 Cluster: Ribosomal protein, putative; n=7;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 256
Score = 109 bits (263), Expect = 4e-23
Identities = 52/85 (61%), Positives = 62/85 (72%)
Frame = +1
Query: 4 FTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKS 183
FTN F EPRL+IV DP D Q + EA+Y NIP IALC+TD+ L +VD IPCNTK+
Sbjct: 106 FTNYSIKNFCEPRLMIVCDPNTDSQAVHEAAYANIPCIALCDTDAHLDYVDCVIPCNTKN 165
Query: 184 SHSIGLMWWLLAREVLRLRGVLPRT 258
+S+GL+ WLL REVLRLRG L RT
Sbjct: 166 KNSMGLVMWLLTREVLRLRGALTRT 190
>UniRef50_Q01CH5 Cluster: B1056G08.113 gene product; n=6;
Eukaryota|Rep: B1056G08.113 gene product - Ostreococcus
tauri
Length = 313
Score = 107 bits (257), Expect = 2e-22
Identities = 48/82 (58%), Positives = 63/82 (76%)
Frame = +1
Query: 4 FTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKS 183
+TNQ A F EPR+L+V DP D QPI+E ++VNIP IA C+TDSPL+ VDIAIP N K+
Sbjct: 131 YTNQKDAVFAEPRVLVVTDPRTDAQPISETAFVNIPTIAFCDTDSPLKNVDIAIPANNKA 190
Query: 184 SHSIGLMWWLLAREVLRLRGVL 249
SIG +++LLAR VL++RG +
Sbjct: 191 KQSIGCLYYLLARMVLQMRGTI 212
Score = 44.8 bits (101), Expect = 0.002
Identities = 19/30 (63%), Positives = 22/30 (73%)
Frame = +3
Query: 249 SPDQRWDVVVXLFFYRDPEESEKDEQQAKE 338
SP WDV+V LFFYRDPEE E EQ+ +E
Sbjct: 213 SPANPWDVMVDLFFYRDPEELEAKEQEEEE 242
>UniRef50_A0ECJ9 Cluster: Chromosome undetermined scaffold_9, whole
genome shotgun sequence; n=4; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_9, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 268
Score = 98.7 bits (235), Expect = 1e-19
Identities = 47/81 (58%), Positives = 59/81 (72%)
Frame = +1
Query: 7 TNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSS 186
+N F+EP+LLIV DP D Q I EASYVNIPVIAL N+D+PL++VDI IP + +
Sbjct: 138 SNSASGKFQEPQLLIVTDPHLDRQAIVEASYVNIPVIALTNSDTPLQYVDIPIPVGNRET 197
Query: 187 HSIGLMWWLLAREVLRLRGVL 249
SI +++WLLAREV LRG L
Sbjct: 198 KSISMIYWLLAREVKILRGEL 218
>UniRef50_Q9U5P8 Cluster: Putative uncharacterized protein; n=1;
Entodinium caudatum|Rep: Putative uncharacterized
protein - Entodinium caudatum
Length = 163
Score = 98.3 bits (234), Expect = 1e-19
Identities = 41/78 (52%), Positives = 60/78 (76%)
Frame = +1
Query: 7 TNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSS 186
TNQ + EPRLLIV DP D+ I E+SYVN+PVIA+CN+D+ L++VD AIPCN +++
Sbjct: 13 TNQTTKKYVEPRLLIVSDPRTDYNAILESSYVNLPVIAICNSDNMLKYVDCAIPCNNRNN 72
Query: 187 HSIGLMWWLLAREVLRLR 240
+SI ++W+LL + VL ++
Sbjct: 73 YSIAMIWYLLTKAVLEIK 90
>UniRef50_A7NTT5 Cluster: Chromosome chr18 scaffold_1, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr18 scaffold_1, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 201
Score = 96.3 bits (229), Expect = 6e-19
Identities = 43/78 (55%), Positives = 54/78 (69%)
Frame = +1
Query: 7 TNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSS 186
TNQ+Q +F EP LLI+ DP DHQPI E + NIP IA C+ DSP+R+VDI I N K
Sbjct: 60 TNQLQTSFSEPYLLILTDPITDHQPIKEVALGNIPTIAFCDIDSPMRYVDIDILTNNKGK 119
Query: 187 HSIGLMWWLLAREVLRLR 240
H+IG ++WLL VL +R
Sbjct: 120 HNIGCLFWLLTMMVLHMR 137
>UniRef50_Q9AW71 Cluster: 40S ribosomal protein SSA; n=1; Guillardia
theta|Rep: 40S ribosomal protein SSA - Guillardia theta
(Cryptomonas phi)
Length = 199
Score = 95.9 bits (228), Expect = 8e-19
Identities = 44/83 (53%), Positives = 58/83 (69%)
Frame = +1
Query: 7 TNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSS 186
TN+ F EPRLLI+ DP D Q + EASYVNIPVI++CNTDS L ++DIAIP N K
Sbjct: 102 TNKTSKLFEEPRLLIISDPLLDKQALLEASYVNIPVISVCNTDSFLSYIDIAIPGNNKDR 161
Query: 187 HSIGLMWWLLAREVLRLRGVLPR 255
+S L+ WLL +++L +G L +
Sbjct: 162 YSFALIIWLLTKKILIFKGELTK 184
>UniRef50_A1RWV4 Cluster: Ribosomal protein S2; n=2; Archaea|Rep:
Ribosomal protein S2 - Thermofilum pendens (strain Hrk
5)
Length = 214
Score = 91.9 bits (218), Expect = 1e-17
Identities = 42/83 (50%), Positives = 57/83 (68%)
Frame = +1
Query: 4 FTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKS 183
FTN + F E L++V DP D Q + EA + IPVIALC+TDSP+ VD+ IP N +
Sbjct: 109 FTNPALSHFTEADLMMVTDPRVDEQAVVEAGTMGIPVIALCDTDSPISNVDLIIPTNNRG 168
Query: 184 SHSIGLMWWLLAREVLRLRGVLP 252
++ L++WLLAREVLR+RG +P
Sbjct: 169 RKALALIFWLLAREVLRIRGDIP 191
>UniRef50_P95993 Cluster: 30S ribosomal protein S2P; n=13;
Archaea|Rep: 30S ribosomal protein S2P - Sulfolobus
solfataricus
Length = 231
Score = 85.0 bits (201), Expect = 1e-15
Identities = 36/83 (43%), Positives = 56/83 (67%)
Frame = +1
Query: 4 FTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKS 183
FTN + + EP++L+V DP D Q I EA+ V IP++A +TD+ + ++D+ IP N K
Sbjct: 131 FTNPYLSTYIEPKVLLVSDPRTDTQAIKEAAKVGIPIVAFADTDAKIDYIDLIIPANNKG 190
Query: 184 SHSIGLMWWLLAREVLRLRGVLP 252
S+ L++W LAR++LR R V+P
Sbjct: 191 RKSLALLYWALARQILRERRVIP 213
>UniRef50_A3H8R8 Cluster: Ribosomal protein S2; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein S2 -
Caldivirga maquilingensis IC-167
Length = 215
Score = 84.2 bits (199), Expect = 2e-15
Identities = 42/79 (53%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Frame = +1
Query: 43 LLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAR 222
LL+V DP D Q I EAS IPVIAL +TDS F+D+ IPCN K +S+ L++WLLAR
Sbjct: 125 LLMVADPKTDFQAINEASLTGIPVIALVDTDSDPTFIDLMIPCNNKGRNSLALVFWLLAR 184
Query: 223 EVLRLRGVL-PRTSAGMLW 276
+VLR RG L P + W
Sbjct: 185 QVLRERGELKPNEDLPVSW 203
>UniRef50_UPI0000EB0B97 Cluster: UPI0000EB0B97 related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB0B97 UniRef100
entry - Canis familiaris
Length = 258
Score = 77.4 bits (182), Expect = 3e-13
Identities = 39/80 (48%), Positives = 53/80 (66%)
Frame = +1
Query: 4 FTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKS 183
FT+Q+QA+ RE LL++ DP DH + EA YVN+ IAL N+ SPL + IAIP ++K
Sbjct: 89 FTSQVQASCRELCLLLITDPRADHPFLMEAPYVNLLTIALRNSQSPLHCMGIAIPHDSKG 148
Query: 184 SHSIGLMWWLLAREVLRLRG 243
+H++G WLLA VL G
Sbjct: 149 AHTVGRRKWLLAWGVLHACG 168
>UniRef50_P57712 Cluster: 30S ribosomal protein S2P; n=2;
Thermoplasma|Rep: 30S ribosomal protein S2P -
Thermoplasma acidophilum
Length = 199
Score = 77.4 bits (182), Expect = 3e-13
Identities = 34/81 (41%), Positives = 53/81 (65%)
Frame = +1
Query: 7 TNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSS 186
TN ++E +++IV DP D Q + EA + IP+IALC+ ++ FVD+ IP N K
Sbjct: 102 TNPSLKFYKEVKVIIVTDPLADVQAMKEAVKIGIPIIALCDANNKTDFVDLIIPTNNKGR 161
Query: 187 HSIGLMWWLLAREVLRLRGVL 249
S+ +++WLLARE+L+ RG +
Sbjct: 162 RSLAVIYWLLAREILKNRGTI 182
>UniRef50_Q8TT39 Cluster: 30S ribosomal protein S2P; n=10;
Euryarchaeota|Rep: 30S ribosomal protein S2P -
Methanosarcina acetivorans
Length = 225
Score = 77.4 bits (182), Expect = 3e-13
Identities = 37/79 (46%), Positives = 52/79 (65%)
Frame = +1
Query: 1 AFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTK 180
+ TN F EP ++IV DPA D Q + EAS + +PV+ALC+T++ VD+ IP N K
Sbjct: 131 SLTNPQIHGFFEPDVIIVTDPAGDAQVLKEASSIGVPVVALCDTNNLTSNVDLVIPTNNK 190
Query: 181 SSHSIGLMWWLLAREVLRL 237
++ L++WLLAREV RL
Sbjct: 191 GRKALSLVYWLLAREVSRL 209
>UniRef50_A0RY14 Cluster: Ribosomal protein S2; n=2;
Thermoprotei|Rep: Ribosomal protein S2 - Cenarchaeum
symbiosum
Length = 208
Score = 75.4 bits (177), Expect = 1e-12
Identities = 35/84 (41%), Positives = 52/84 (61%)
Frame = +1
Query: 7 TNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSS 186
TN + EP+LL+V DP D Q +TEA+ IPVI + N+D+ +D+ IP N +
Sbjct: 106 TNPDLPKYMEPKLLLVCDPQVDAQAVTEATNAGIPVIGIANSDNVTSRLDVIIPANNRGR 165
Query: 187 HSIGLMWWLLAREVLRLRGVLPRT 258
++ ++WLLAREVL +RG + T
Sbjct: 166 GALAAIFWLLAREVLVIRGEVDET 189
>UniRef50_P54109 Cluster: 30S ribosomal protein S2P; n=10;
Euryarchaeota|Rep: 30S ribosomal protein S2P -
Methanococcus jannaschii
Length = 222
Score = 75.4 bits (177), Expect = 1e-12
Identities = 30/81 (37%), Positives = 50/81 (61%)
Frame = +1
Query: 7 TNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSS 186
TN F EP ++ + DP D Q + EA+ + +P++ LC+T+ F+D+ IP N K
Sbjct: 103 TNPAYKGFMEPEVVFISDPRVDRQALKEATEIGVPIVGLCDTEHLTSFIDLVIPTNNKGK 162
Query: 187 HSIGLMWWLLAREVLRLRGVL 249
++ L+++LL RE L+ RGV+
Sbjct: 163 KAVALIYYLLTREYLKNRGVI 183
>UniRef50_Q74M65 Cluster: NEQ508; n=1; Nanoarchaeum equitans|Rep:
NEQ508 - Nanoarchaeum equitans
Length = 201
Score = 71.3 bits (167), Expect = 2e-11
Identities = 30/81 (37%), Positives = 49/81 (60%)
Frame = +1
Query: 7 TNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSS 186
TN + EP ++++ DP D + +A I ++ALC+T+ ++D IP N + S
Sbjct: 100 TNPQLKYYMEPEVILITDPIMDKNALHDAYESGITILALCDTNHTKNYIDFCIPANNRGS 159
Query: 187 HSIGLMWWLLAREVLRLRGVL 249
S+ L++W+LARE LR RGV+
Sbjct: 160 KSLALIYWILAREYLRNRGVI 180
>UniRef50_O15585 Cluster: Ribosomal protein SA (P40) / laminin
receptor; n=3; Entamoeba histolytica|Rep: Ribosomal
protein SA (P40) / laminin receptor - Entamoeba
histolytica
Length = 173
Score = 70.9 bits (166), Expect = 2e-11
Identities = 31/56 (55%), Positives = 41/56 (73%)
Frame = +1
Query: 1 AFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIP 168
+FTNQIQ F EPRL+IV DP+ DHQ + E+ Y+N+P I N+D+ L+ V IAIP
Sbjct: 118 SFTNQIQKKFMEPRLIIVSDPSVDHQALRESGYINVPTIGFWNSDNRLKNVGIAIP 173
>UniRef50_P29202 Cluster: 30S ribosomal protein S2P; n=12;
Euryarchaeota|Rep: 30S ribosomal protein S2P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 267
Score = 70.1 bits (164), Expect = 4e-11
Identities = 32/82 (39%), Positives = 49/82 (59%)
Frame = +1
Query: 7 TNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSS 186
TN + EP +++V DP D Q + EA V IPVIA+C++++ VD+ +P N K
Sbjct: 175 TNPDYDGYIEPDIVVVTDPIGDAQAVKEAITVGIPVIAMCDSNNTTSNVDLVVPTNNKGR 234
Query: 187 HSIGLMWWLLAREVLRLRGVLP 252
++ +++WLLA E L RG P
Sbjct: 235 KALSVVYWLLANETLDRRGAEP 256
>UniRef50_Q3LVY7 Cluster: Ribosomal RNA S0; n=1; Bigelowiella
natans|Rep: Ribosomal RNA S0 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 211
Score = 65.3 bits (152), Expect = 1e-09
Identities = 33/108 (30%), Positives = 58/108 (53%)
Frame = +1
Query: 4 FTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKS 183
F+N+ +F P IV +P D + I E S +NIP+I +CNTD+ + F+D +P NT S
Sbjct: 100 FSNRQIKSFMLPEAAIVAEPKNDPRIIRELSNINIPIIGICNTDTNISFIDWVLPSNTNS 159
Query: 184 SHSIGLMWWLLAREVLRLRGVLPRTSAGMLWXICSSTVTLKKVKRMNN 327
S ++++L+ R + R + G+ + + K +K++ N
Sbjct: 160 KFSNAMIFYLIGRLLKRYYILKKSNLRGLFFHCLIDKESKKDMKKIIN 207
>UniRef50_Q8SS60 Cluster: 40S RIBOSOMAL PROTEIN SA or P40; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN SA
or P40 - Encephalitozoon cuniculi
Length = 252
Score = 64.1 bits (149), Expect = 3e-09
Identities = 33/74 (44%), Positives = 45/74 (60%)
Frame = +1
Query: 1 AFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTK 180
+FTN +PR+LIV D D Q I E+ Y N+P IA NTD+ L VDIAIP N +
Sbjct: 112 SFTNSEVKRVYDPRVLIVSDTYADKQAILESQYCNLPTIAFVNTDNSLVGVDIAIPMNNR 171
Query: 181 SSHSIGLMWWLLAR 222
S +I +++L+R
Sbjct: 172 SPSAIAAGFFILSR 185
>UniRef50_Q6PDB3 Cluster: LOC204010 protein; n=2; Eutheria|Rep:
LOC204010 protein - Homo sapiens (Human)
Length = 197
Score = 60.1 bits (139), Expect = 5e-08
Identities = 34/93 (36%), Positives = 46/93 (49%), Gaps = 1/93 (1%)
Frame = +3
Query: 153 GHCYPMQHQVFPLYWFDVVVVGT*SAEASWCASPDQRWDVVVXLFFYRDPEESEKDEQQA 332
GHC+ MQ Q L DVV G S+ +W W+V+ L+FYRDPEE+EK+EQ A
Sbjct: 71 GHCHHMQQQGSSLSGSDVVDAGLGSSAHAWHHFLQHPWEVMSNLYFYRDPEETEKEEQAA 130
Query: 333 KEQXXXXXXXXXXXXXH-EDWNETLEPVASWAE 428
E+ ++ T VA W+E
Sbjct: 131 AEKAVTKKEFQGKWTVSAPEFTVTQPEVADWSE 163
>UniRef50_Q9PRB9 Cluster: 30S ribosomal protein S2; n=1; Ureaplasma
parvum|Rep: 30S ribosomal protein S2 - Ureaplasma parvum
(Ureaplasma urealyticum biotype 1)
Length = 349
Score = 58.0 bits (134), Expect = 2e-07
Identities = 32/80 (40%), Positives = 45/80 (56%)
Frame = +1
Query: 4 FTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKS 183
F I+ + P +LI++DP D I EA +NIPVIAL NT++ + +D IP N S
Sbjct: 199 FYGGIKNMKQRPDVLILVDPVNDVNAIKEARKLNIPVIALANTNADPQLIDYIIPVNNYS 258
Query: 184 SHSIGLMWWLLAREVLRLRG 243
SI L+ +LA + L G
Sbjct: 259 VKSITLILGVLADSIAELHG 278
>UniRef50_P75560 Cluster: 30S ribosomal protein S2; n=4;
Mycoplasma|Rep: 30S ribosomal protein S2 - Mycoplasma
pneumoniae
Length = 294
Score = 56.8 bits (131), Expect = 4e-07
Identities = 30/81 (37%), Positives = 43/81 (53%)
Frame = +1
Query: 4 FTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKS 183
F +++ R P LLIV DP + + EA+ + IPV+ALCNT++ VD IP N
Sbjct: 162 FFGGVKSLKRLPNLLIVDDPVYEKNAVAEANILRIPVVALCNTNTNPELVDFIIPANNHQ 221
Query: 184 SHSIGLMWWLLAREVLRLRGV 246
S L+ LLA V + +
Sbjct: 222 PQSTCLLMNLLADAVAEAKAM 242
>UniRef50_UPI0000EB1146 Cluster: UPI0000EB1146 related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB1146 UniRef100
entry - Canis familiaris
Length = 222
Score = 55.6 bits (128), Expect = 1e-06
Identities = 28/52 (53%), Positives = 33/52 (63%)
Frame = +1
Query: 76 QPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVL 231
QP + YVN+P IAL + DS DIA PCN K HS+GLM W+LA E L
Sbjct: 85 QPSLASQYVNLPPIALYDADSSWCSADIA-PCNIKGVHSVGLMCWVLAGEAL 135
>UniRef50_Q7NAW2 Cluster: RpsB; n=1; Mycoplasma gallisepticum|Rep:
RpsB - Mycoplasma gallisepticum
Length = 323
Score = 53.6 bits (123), Expect = 4e-06
Identities = 26/69 (37%), Positives = 40/69 (57%)
Frame = +1
Query: 37 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLL 216
P +L++ DP ++ +TEA + IPVIALCNT+S + + IP N + S+ L+ LL
Sbjct: 201 PHVLVIDDPIKEKNAVTEARKLRIPVIALCNTNSDPNVITLPIPANNYNIRSVTLLLNLL 260
Query: 217 AREVLRLRG 243
V +G
Sbjct: 261 GDAVALAQG 269
>UniRef50_Q8EUG1 Cluster: Ribosomal protein S2; n=1; Mycoplasma
penetrans|Rep: Ribosomal protein S2 - Mycoplasma
penetrans
Length = 367
Score = 52.8 bits (121), Expect = 7e-06
Identities = 30/76 (39%), Positives = 43/76 (56%)
Frame = +1
Query: 37 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLL 216
P+++I+ DP + I EA + IPVIA+CNT++ VD IP N S S+ L+ LL
Sbjct: 263 PKVIILTDPEINKIAIKEARNLGIPVIAICNTNANPDLVDYVIPANNHSIKSVYLLVGLL 322
Query: 217 AREVLRLRGVLPRTSA 264
V +G LP+ A
Sbjct: 323 CDAVAEAKG-LPKAFA 337
>UniRef50_Q4P1B8 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 251
Score = 52.0 bits (119), Expect = 1e-05
Identities = 31/79 (39%), Positives = 43/79 (54%)
Frame = +1
Query: 7 TNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSS 186
TN + F+E R++IV+DP HQ + +A FVDIAIP N +
Sbjct: 82 TNYVTRWFKETRVIIVIDPHVSHQAMHKAL-----------------FVDIAIPGNVRGR 124
Query: 187 HSIGLMWWLLAREVLRLRG 243
HS+ ++W LL R VLRL+G
Sbjct: 125 HSVVILWCLLCRTVLRLKG 143
>UniRef50_A3AIV8 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 280
Score = 50.8 bits (116), Expect = 3e-05
Identities = 21/38 (55%), Positives = 28/38 (73%)
Frame = +1
Query: 4 FTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVI 117
FTNQ+Q +F EPRLLI+ DP DHQPI E++ P++
Sbjct: 109 FTNQLQTSFSEPRLLILTDPRTDHQPIKESALETSPLL 146
Score = 42.7 bits (96), Expect = 0.007
Identities = 15/26 (57%), Positives = 22/26 (84%)
Frame = +3
Query: 252 PDQRWDVVVXLFFYRDPEESEKDEQQ 329
P +WDV+V LFFYRDPEE+++ E++
Sbjct: 167 PGHKWDVMVDLFFYRDPEEAKEQEEE 192
>UniRef50_P19679 Cluster: 30S ribosomal protein S2; n=3;
Firmicutes|Rep: 30S ribosomal protein S2 - Spiroplasma
citri
Length = 359
Score = 49.2 bits (112), Expect = 9e-05
Identities = 24/67 (35%), Positives = 38/67 (56%)
Frame = +1
Query: 4 FTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKS 183
F I+ P+ L V+DP ++H + EA + IPVIA+C+T+ +D IP N +
Sbjct: 148 FLGGIKGMKELPQALFVVDPKEEHIAVREARKLRIPVIAICDTNVDPVPIDYIIPANDDT 207
Query: 184 SHSIGLM 204
S SI ++
Sbjct: 208 SRSIAII 214
>UniRef50_Q4GXR5 Cluster: Ribosomal protein SAe; n=2; Adephaga|Rep:
Ribosomal protein SAe - Meladema coriacea
Length = 112
Score = 48.0 bits (109), Expect = 2e-04
Identities = 19/28 (67%), Positives = 24/28 (85%)
Frame = +3
Query: 255 DQRWDVVVXLFFYRDPEESEKDEQQAKE 338
+ +W+VVV LFFYRDPEE+EK+EQ KE
Sbjct: 21 ETKWEVVVDLFFYRDPEEAEKEEQAQKE 48
Score = 43.6 bits (98), Expect = 0.004
Identities = 17/20 (85%), Positives = 20/20 (100%)
Frame = +1
Query: 196 GLMWWLLAREVLRLRGVLPR 255
GL+WWLLAREVLRLRG++PR
Sbjct: 1 GLVWWLLAREVLRLRGLIPR 20
>UniRef50_Q5A8K1 Cluster: Likely mitochondrial ribosomal protein;
n=3; Saccharomycetales|Rep: Likely mitochondrial
ribosomal protein - Candida albicans (Yeast)
Length = 460
Score = 47.6 bits (108), Expect = 3e-04
Identities = 21/63 (33%), Positives = 35/63 (55%)
Frame = +1
Query: 34 EPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWL 213
+P L+++L+P ++ I E IP I LC+TD + IPCN S S+ LM +
Sbjct: 372 KPDLVVLLNPVENRNCIKECISAGIPTIGLCDTDMEPSLLTYPIPCNDDSVRSVNLMLGI 431
Query: 214 LAR 222
+++
Sbjct: 432 MSK 434
>UniRef50_Q9ZE61 Cluster: 30S ribosomal protein S2; n=10;
Rickettsieae|Rep: 30S ribosomal protein S2 - Rickettsia
prowazekii
Length = 296
Score = 47.6 bits (108), Expect = 3e-04
Identities = 28/67 (41%), Positives = 39/67 (58%)
Frame = +1
Query: 34 EPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWL 213
+P LL+V+D ++H I EA +NIPV+A+ +T+S VD IP N S SI L L
Sbjct: 161 KPDLLVVIDTNKEHIAINEAVKLNIPVVAVVDTNSNPDNVDYPIPGNDDSIRSIRLYCSL 220
Query: 214 LAREVLR 234
A L+
Sbjct: 221 FADAALQ 227
>UniRef50_Q98Q36 Cluster: 30S ribosomal protein S2; n=2;
Mycoplasma|Rep: 30S ribosomal protein S2 - Mycoplasma
pulmonis
Length = 330
Score = 47.6 bits (108), Expect = 3e-04
Identities = 23/70 (32%), Positives = 39/70 (55%)
Frame = +1
Query: 34 EPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWL 213
+P +IV+DP D + EA + +I + ++D+ FVD+ IP N S SI L+ +
Sbjct: 176 QPNFMIVVDPNVDRIAVKEARDKGVKIIGILDSDANPDFVDLGIPANDDSIKSISLILTV 235
Query: 214 LAREVLRLRG 243
LA ++ +G
Sbjct: 236 LADAIVNAKG 245
>UniRef50_Q6F0Q4 Cluster: 30S ribosomal protein S2; n=4;
Mollicutes|Rep: 30S ribosomal protein S2 - Mesoplasma
florum (Acholeplasma florum)
Length = 266
Score = 47.6 bits (108), Expect = 3e-04
Identities = 23/56 (41%), Positives = 31/56 (55%)
Frame = +1
Query: 37 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 204
P LIV+DP D + EA +NIPVI LC+T+ V + IP N S+ +M
Sbjct: 160 PAALIVVDPKSDEIAVKEAIKLNIPVIGLCDTNVDPDIVTLPIPANDDLQESVNIM 215
>UniRef50_Q9RU79 Cluster: 30S ribosomal protein S2; n=7;
Bacteria|Rep: 30S ribosomal protein S2 - Deinococcus
radiodurans
Length = 264
Score = 47.6 bits (108), Expect = 3e-04
Identities = 29/88 (32%), Positives = 45/88 (51%)
Frame = +1
Query: 4 FTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKS 183
F I+ R P + V+DP ++ + EA+ + IPVIAL +TDS +D +P N +
Sbjct: 147 FVGGIRKMNRLPDAIFVVDPTKEVIAVQEANKLGIPVIALADTDSDPDVIDYIVPGNDDA 206
Query: 184 SHSIGLMWWLLAREVLRLRGVLPRTSAG 267
SI L+ + ++ RG SAG
Sbjct: 207 IRSIQLITHRVGDLLVEARGGHEDVSAG 234
>UniRef50_Q862Y3 Cluster: Similar to C10 protein; n=3; Eutheria|Rep:
Similar to C10 protein - Bos taurus (Bovine)
Length = 130
Score = 46.8 bits (106), Expect = 5e-04
Identities = 17/26 (65%), Positives = 23/26 (88%)
Frame = +1
Query: 178 KSSHSIGLMWWLLAREVLRLRGVLPR 255
K +HS+GL+WW+LAREVLR+RG + R
Sbjct: 1 KGAHSVGLIWWMLAREVLRMRGTISR 26
Score = 41.5 bits (93), Expect = 0.017
Identities = 17/31 (54%), Positives = 23/31 (74%)
Frame = +3
Query: 249 SPDQRWDVVVXLFFYRDPEESEKDEQQAKEQ 341
S + W+V+ L+FYRDPEE EK+EQ A E+
Sbjct: 25 SREHPWEVMPDLYFYRDPEEIEKEEQAAAEK 55
>UniRef50_Q9TCC3 Cluster: Ribosomal protein S2; n=1; Nephroselmis
olivacea|Rep: Ribosomal protein S2 - Nephroselmis
olivacea
Length = 235
Score = 46.4 bits (105), Expect = 6e-04
Identities = 23/55 (41%), Positives = 35/55 (63%)
Frame = +1
Query: 19 QAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKS 183
Q +P LLIVL+P+++ + I EA +NIPVIA+ ++D+ L + IP N S
Sbjct: 156 QTPISKPDLLIVLNPSKNKEAINEAWVLNIPVIAIVDSDTNLSKITYPIPGNNSS 210
>UniRef50_UPI0000E48DD5 Cluster: PREDICTED: similar to 34/67 kD
laminin binding protein; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to 34/67 kD laminin
binding protein - Strongylocentrotus purpuratus
Length = 220
Score = 46.0 bits (104), Expect = 8e-04
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +1
Query: 187 HSIGLMWWLLAREVLRLRGVLPR 255
HSIGLMWW+L+REVLRLRG + R
Sbjct: 48 HSIGLMWWMLSREVLRLRGAISR 70
Score = 45.6 bits (103), Expect = 0.001
Identities = 16/31 (51%), Positives = 27/31 (87%)
Frame = +3
Query: 249 SPDQRWDVVVXLFFYRDPEESEKDEQQAKEQ 341
S D W+++V L+F+RDPEE+EK+EQ+A+++
Sbjct: 69 SRDVTWEIMVDLYFFRDPEEAEKEEQEARDR 99
>UniRef50_Q1AW68 Cluster: Ribosomal protein S2; n=3; Bacteria|Rep:
Ribosomal protein S2 - Rubrobacter xylanophilus (strain
DSM 9941 / NBRC 16129)
Length = 306
Score = 45.6 bits (103), Expect = 0.001
Identities = 25/71 (35%), Positives = 40/71 (56%)
Frame = +1
Query: 31 REPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWW 210
R P + V+DP ++ + EA+ + IPV+AL +T+ +D IP N + SI L+
Sbjct: 159 RLPGAVYVVDPKREELLVREANRLRIPVVALTDTNCDPDVIDYVIPGNDDAIRSISLITR 218
Query: 211 LLAREVLRLRG 243
L+A V+ RG
Sbjct: 219 LIADAVIEGRG 229
>UniRef50_Q6BNP9 Cluster: Debaryomyces hansenii chromosome E of
strain CBS767 of Debaryomyces hansenii; n=2;
Saccharomycetaceae|Rep: Debaryomyces hansenii chromosome
E of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 468
Score = 45.6 bits (103), Expect = 0.001
Identities = 21/63 (33%), Positives = 34/63 (53%)
Frame = +1
Query: 34 EPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWL 213
+P L+++L+P ++ I E IP I LC+TD + IPCN S + LM +
Sbjct: 362 KPDLIVLLNPVENRNCINECIKQRIPTIGLCDTDMEPSLLTYPIPCNDDSMRASSLMTGI 421
Query: 214 LAR 222
L++
Sbjct: 422 LSK 424
>UniRef50_P32902 Cluster: 37S ribosomal protein MRP4, mitochondrial
precursor; n=6; Saccharomycetales|Rep: 37S ribosomal
protein MRP4, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 394
Score = 45.6 bits (103), Expect = 0.001
Identities = 23/63 (36%), Positives = 35/63 (55%)
Frame = +1
Query: 34 EPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWL 213
+P LL+VL+P ++ + EA +P IA+ +TDS V IP N S S+ + +
Sbjct: 316 KPDLLVVLNPTENRNALLEAIKSRVPTIAIIDTDSEPSLVTYPIPGNDDSLRSVNFLLGV 375
Query: 214 LAR 222
LAR
Sbjct: 376 LAR 378
>UniRef50_Q9TM33 Cluster: Chloroplast 30S ribosomal protein S2; n=1;
Cyanidium caldarium|Rep: Chloroplast 30S ribosomal
protein S2 - Cyanidium caldarium
Length = 243
Score = 45.6 bits (103), Expect = 0.001
Identities = 21/79 (26%), Positives = 45/79 (56%)
Frame = +1
Query: 4 FTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKS 183
+ N I+ + P ++I++DP+++ I+E +NIP I + +T+ + V++ IP N S
Sbjct: 146 YLNGIKGMKKPPDIIILVDPSREKTTISECQKLNIPTIGILDTNCNPKSVNVPIPANDDS 205
Query: 184 SHSIGLMWWLLAREVLRLR 240
+I L+ L+ + + +
Sbjct: 206 IKAIDLIVSKLSTSIFKAK 224
>UniRef50_O84687 Cluster: 30S ribosomal protein S2; n=32;
Chlamydiales|Rep: 30S ribosomal protein S2 - Chlamydia
trachomatis
Length = 282
Score = 45.2 bits (102), Expect = 0.001
Identities = 23/56 (41%), Positives = 33/56 (58%)
Frame = +1
Query: 37 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 204
P LLIV+DP + + EA + IPV+AL +T+ ++ IPCN S SI L+
Sbjct: 160 PGLLIVIDPGYERIAVAEAGKLGIPVMALVDTNCDPTPINHVIPCNDDSMKSIRLI 215
>UniRef50_Q7NJK2 Cluster: 30S ribosomal protein S2; n=154; cellular
organisms|Rep: 30S ribosomal protein S2 - Gloeobacter
violaceus
Length = 274
Score = 44.8 bits (101), Expect = 0.002
Identities = 21/63 (33%), Positives = 37/63 (58%)
Frame = +1
Query: 31 REPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWW 210
R+P +L+V+D ++ + EA +NIP+++L +T+ D+ IP N + SI L+
Sbjct: 156 RKPDILLVVDQRREQNAVMEARRLNIPIVSLLDTNCDPDLTDVGIPANDDAIRSIRLIVG 215
Query: 211 LLA 219
LA
Sbjct: 216 KLA 218
>UniRef50_Q7UKH4 Cluster: 30S ribosomal protein S2; n=3;
Planctomycetaceae|Rep: 30S ribosomal protein S2 -
Rhodopirellula baltica
Length = 260
Score = 44.4 bits (100), Expect = 0.002
Identities = 22/78 (28%), Positives = 41/78 (52%)
Frame = +1
Query: 10 NQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSH 189
N ++ R P ++ ++DP ++ + EA + I +AL +TDS +D+ IP N
Sbjct: 149 NGLRTMNRLPEVMFIVDPGKERNAVREAKRLGITTVALIDTDSDPSQIDLPIPGNDDGIR 208
Query: 190 SIGLMWWLLAREVLRLRG 243
S+ ++ LA V+ +G
Sbjct: 209 SVEMIMRELADAVIAGKG 226
>UniRef50_Q6MGY6 Cluster: 30S ribosomal protein S2; n=3;
Deltaproteobacteria|Rep: 30S ribosomal protein S2 -
Bdellovibrio bacteriovorus
Length = 313
Score = 43.6 bits (98), Expect = 0.004
Identities = 23/61 (37%), Positives = 35/61 (57%)
Frame = +1
Query: 37 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLL 216
P + V+D ++H + EA + IPV+A+ +T+S VD AIP N + SI L L+
Sbjct: 158 PSAMFVVDLPKEHIAVAEAKRLGIPVVAIADTNSDPESVDFAIPGNDDAIRSIKLFSNLV 217
Query: 217 A 219
A
Sbjct: 218 A 218
>UniRef50_Q88VJ4 Cluster: 30S ribosomal protein S2; n=5;
Bacteria|Rep: 30S ribosomal protein S2 - Lactobacillus
plantarum
Length = 267
Score = 43.6 bits (98), Expect = 0.004
Identities = 21/79 (26%), Positives = 44/79 (55%)
Frame = +1
Query: 4 FTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKS 183
F I+ R P ++ ++DP ++ + EA +NIP++A+ +T++ +D+ IP N +
Sbjct: 147 FLGGIEDMPRIPDVIFIVDPRKEQIAVKEAQKLNIPIVAMVDTNTDPDDIDVIIPSNDDA 206
Query: 184 SHSIGLMWWLLAREVLRLR 240
++ L+ +A V+ R
Sbjct: 207 IRAVRLITSKMADAVIEGR 225
>UniRef50_Q3B5U0 Cluster: Ribosomal protein S2; n=1; Pelodictyon
luteolum DSM 273|Rep: Ribosomal protein S2 - Pelodictyon
luteolum (strain DSM 273) (Chlorobium luteolum (strain
DSM273))
Length = 253
Score = 42.3 bits (95), Expect = 0.010
Identities = 24/72 (33%), Positives = 37/72 (51%)
Frame = +1
Query: 31 REPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWW 210
R P L ++D ++H I EA + IP+ A+ +T+ VD IP N + SI LM
Sbjct: 156 RLPAALFIVDIKKEHIAIKEARSLGIPIFAMVDTNCDPEQVDYVIPANDDAIRSIQLMVK 215
Query: 211 LLAREVLRLRGV 246
+A V+ R +
Sbjct: 216 AVADTVVNARAM 227
>UniRef50_Q8KBK6 Cluster: 30S ribosomal protein S2; n=3;
Bacteria|Rep: 30S ribosomal protein S2 - Chlorobium
tepidum
Length = 249
Score = 42.3 bits (95), Expect = 0.010
Identities = 24/70 (34%), Positives = 36/70 (51%)
Frame = +1
Query: 31 REPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWW 210
R P L V+D ++H + EA + IP+ A+ +T+ VD IP N + SI LM
Sbjct: 157 RLPAALFVVDIKKEHIAVKEARSLGIPIFAMVDTNCDPDEVDYVIPANDDAIRSIDLMVK 216
Query: 211 LLAREVLRLR 240
+A +L R
Sbjct: 217 AVADTILEAR 226
>UniRef50_A6EB55 Cluster: 30S ribosomal subunit protein S2; n=3;
Bacteroidetes/Chlorobi group|Rep: 30S ribosomal subunit
protein S2 - Pedobacter sp. BAL39
Length = 276
Score = 41.9 bits (94), Expect = 0.013
Identities = 19/58 (32%), Positives = 34/58 (58%)
Frame = +1
Query: 31 REPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 204
R P + ++D ++H ++EA +NIP A+ +T+S +D IP N ++ SI L+
Sbjct: 156 RLPAAIFLIDVKKEHIAVSEALKLNIPTFAMVDTNSDPSNIDFPIPANDDATKSISLI 213
>UniRef50_A5IY48 Cluster: 30S ribosomal protein S2; n=8;
Mycoplasma|Rep: 30S ribosomal protein S2 - Mycoplasma
agalactiae
Length = 317
Score = 41.9 bits (94), Expect = 0.013
Identities = 24/69 (34%), Positives = 35/69 (50%)
Frame = +1
Query: 37 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLL 216
P +IV DP D + EA + VI + +++S VD IP N S+ SI L+ +L
Sbjct: 192 PSFMIVADPNVDAIAVKEARSKGVKVIGILDSNSNPDAVDFGIPANDDSAKSITLIMTIL 251
Query: 217 AREVLRLRG 243
A + RG
Sbjct: 252 ADAIATARG 260
>UniRef50_A3ZXT5 Cluster: Ribosomal protein S2; n=1; Blastopirellula
marina DSM 3645|Rep: Ribosomal protein S2 -
Blastopirellula marina DSM 3645
Length = 243
Score = 41.9 bits (94), Expect = 0.013
Identities = 24/74 (32%), Positives = 37/74 (50%)
Frame = +1
Query: 10 NQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSH 189
N ++ R P L+++DP ++ I EA + I +AL +TD +D+ +P N
Sbjct: 153 NGLRTMNRLPETLVIVDPKKEKNAIREAHSLGITTVALTDTDCDPDEIDLPVPGNDDGIR 212
Query: 190 SIGLMWWLLAREVL 231
SI L LA VL
Sbjct: 213 SIELFTKHLADAVL 226
>UniRef50_A1B8E9 Cluster: Ribosomal protein S2; n=5; Bacteria|Rep:
Ribosomal protein S2 - Paracoccus denitrificans (strain
Pd 1222)
Length = 261
Score = 41.9 bits (94), Expect = 0.013
Identities = 23/65 (35%), Positives = 37/65 (56%)
Frame = +1
Query: 37 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLL 216
P LL V+D ++ I EA + IPV+A+ +T+ + VD IP N ++ +I L L+
Sbjct: 161 PDLLFVIDVNKEDLAIAEAKKLGIPVVAVVDTNCSPKGVDYVIPGNDDAARAIALYCDLV 220
Query: 217 AREVL 231
+R L
Sbjct: 221 SRAAL 225
>UniRef50_Q8JIE5 Cluster: 67kD laminin receptor/ribosomal protein;
n=3; Euteleostomi|Rep: 67kD laminin receptor/ribosomal
protein - Agalychnis callidryas (Red-eyed leaf frog)
Length = 140
Score = 41.5 bits (93), Expect = 0.017
Identities = 17/31 (54%), Positives = 23/31 (74%)
Frame = +3
Query: 249 SPDQRWDVVVXLFFYRDPEESEKDEQQAKEQ 341
S + W+V+ L+FYRDPEE EK+EQ A E+
Sbjct: 16 SREHPWEVMPDLYFYRDPEEIEKEEQAAAEK 46
Score = 33.9 bits (74), Expect = 3.5
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +1
Query: 205 WWLLAREVLRLRGVLPR 255
WW+LAREVLR+RG + R
Sbjct: 1 WWMLAREVLRMRGTISR 17
>UniRef50_O13970 Cluster: Mitochondrial ribosomal protein subunit
S2; n=1; Schizosaccharomyces pombe|Rep: Mitochondrial
ribosomal protein subunit S2 - Schizosaccharomyces pombe
(Fission yeast)
Length = 263
Score = 41.5 bits (93), Expect = 0.017
Identities = 20/62 (32%), Positives = 33/62 (53%)
Frame = +1
Query: 37 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLL 216
P L+++L+P ++ EA ++P I + +TD+ R V IP N S L+ LL
Sbjct: 180 PDLMVILNPLENKSACLEAQKTHVPTIGIIDTDADPRMVTYPIPANDDSLRCTDLIAGLL 239
Query: 217 AR 222
+R
Sbjct: 240 SR 241
>UniRef50_A6YEB6 Cluster: Ribosomal protein S2; n=1; Chlorokybus
atmophyticus|Rep: Ribosomal protein S2 - Chlorokybus
atmophyticus (Soil alga)
Length = 442
Score = 41.1 bits (92), Expect = 0.023
Identities = 18/41 (43%), Positives = 29/41 (70%)
Frame = +1
Query: 31 REPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFV 153
+ P L+I L+P Q+ PI EA +NIP+IAL ++++P R +
Sbjct: 365 KRPNLIIFLNPNQNEIPIREAFNLNIPIIALVDSNTPPRLL 405
>UniRef50_A6GAK0 Cluster: Ribosomal protein S2; n=2;
Deltaproteobacteria|Rep: Ribosomal protein S2 -
Plesiocystis pacifica SIR-1
Length = 301
Score = 40.7 bits (91), Expect = 0.030
Identities = 18/56 (32%), Positives = 34/56 (60%)
Frame = +1
Query: 37 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 204
P + V+DP ++H ++EA+ + +PV+AL +T++ + IP N + SI L+
Sbjct: 174 PGAIFVIDPNREHIAVSEANRLGVPVVALADTNADPSKIQYIIPGNDDAIRSIKLI 229
>UniRef50_A3HWY0 Cluster: 30S ribosomal protein S2; n=1;
Algoriphagus sp. PR1|Rep: 30S ribosomal protein S2 -
Algoriphagus sp. PR1
Length = 253
Score = 40.7 bits (91), Expect = 0.030
Identities = 21/58 (36%), Positives = 32/58 (55%)
Frame = +1
Query: 31 REPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 204
R P L ++D ++H I EA + IPV AL +T+S V+ IP N + S+ L+
Sbjct: 156 RLPAALFIVDIKREHIAIAEAKKLGIPVYALVDTNSNPNEVEFPIPANDDAFKSVSLL 213
>UniRef50_Q7MX41 Cluster: 30S ribosomal protein S2; n=23;
Bacteroidetes|Rep: 30S ribosomal protein S2 -
Porphyromonas gingivalis (Bacteroides gingivalis)
Length = 281
Score = 40.7 bits (91), Expect = 0.030
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = +1
Query: 31 REPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 204
R P L V+D ++H + EA+ + IPV A+ +T+S +D IP N + +I L+
Sbjct: 156 RLPSALFVVDVMKEHIAVREANRLGIPVFAMVDTNSDPSLIDYVIPSNDDALKAIELI 213
>UniRef50_Q2GCI4 Cluster: Ribosomal protein S2; n=1; Neorickettsia
sennetsu str. Miyayama|Rep: Ribosomal protein S2 -
Neorickettsia sennetsu (strain Miyayama)
Length = 298
Score = 40.3 bits (90), Expect = 0.040
Identities = 22/65 (33%), Positives = 35/65 (53%)
Frame = +1
Query: 37 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLL 216
P ++ V+DP ++H + EA + IPV+A+ +T+ + AIP N S I L+
Sbjct: 162 PNIIFVIDPKKEHIAVEEAWKLGIPVVAVVDTNCDPSKITYAIPGNDDSLRCIEYYCSLV 221
Query: 217 AREVL 231
A VL
Sbjct: 222 ADAVL 226
>UniRef50_Q6YR51 Cluster: 30S ribosomal protein S2; n=2; Candidatus
Phytoplasma asteris|Rep: 30S ribosomal protein S2 -
Onion yellows phytoplasma
Length = 271
Score = 39.5 bits (88), Expect = 0.069
Identities = 18/61 (29%), Positives = 32/61 (52%)
Frame = +1
Query: 37 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLL 216
P+ + V+DP ++ + EA + I V + +T+ VD IP N + + L+ WL+
Sbjct: 158 PQAIFVVDPEKESIAVAEARKLGIKVFGIVDTNCDPDLVDYIIPANDDAIRGVKLIIWLM 217
Query: 217 A 219
A
Sbjct: 218 A 218
>UniRef50_Q5YS61 Cluster: 30S ribosomal protein S2; n=60;
Bacteria|Rep: 30S ribosomal protein S2 - Nocardia
farcinica
Length = 285
Score = 39.5 bits (88), Expect = 0.069
Identities = 22/64 (34%), Positives = 35/64 (54%)
Frame = +1
Query: 37 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLL 216
P + V+D ++H + EA +NIPVIA+ +T+ VD IP N + S L+ ++
Sbjct: 158 PSAIWVVDTNKEHIAVGEARKLNIPVIAILDTNCDPDLVDYPIPGNDDAIRSAALLTKVV 217
Query: 217 AREV 228
A V
Sbjct: 218 ASAV 221
>UniRef50_Q6E782 Cluster: Ribosomal protein S2; n=4; Oomycetes|Rep:
Ribosomal protein S2 - Saprolegnia ferax
Length = 198
Score = 39.1 bits (87), Expect = 0.092
Identities = 17/64 (26%), Positives = 40/64 (62%)
Frame = +1
Query: 43 LLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAR 222
++++ +++ +TE ++ NIP+I L NT+S + +++ I NTK+ S+ + +L+ +
Sbjct: 135 IILLKSKTKENYLLTEFNHKNIPIITLNNTNSNIDYINYPIFSNTKNLKSLFFLIYLIRK 194
Query: 223 EVLR 234
L+
Sbjct: 195 TFLK 198
>UniRef50_A5BFJ2 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 159
Score = 38.3 bits (85), Expect = 0.16
Identities = 19/47 (40%), Positives = 29/47 (61%)
Frame = +1
Query: 25 AFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAI 165
+F P + I L +QPI EA+ N P+IA C+TDSP++ V + +
Sbjct: 65 SFPNPSIKITLH----YQPIKEAALGNTPIIAFCDTDSPMQCVALLL 107
>UniRef50_Q4P627 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 329
Score = 38.3 bits (85), Expect = 0.16
Identities = 18/45 (40%), Positives = 30/45 (66%)
Frame = +1
Query: 1 AFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTD 135
A TN++ + +P L+IVL+P ++ I EA+ NIP IA+ ++D
Sbjct: 241 ANTNRLASQTLQPDLVIVLNPIENSFAIREATQANIPTIAITDSD 285
>UniRef50_Q83SL4 Cluster: 30S ribosomal protein S2; n=330;
Bacteria|Rep: 30S ribosomal protein S2 - Shigella
flexneri
Length = 241
Score = 38.3 bits (85), Expect = 0.16
Identities = 22/64 (34%), Positives = 33/64 (51%)
Frame = +1
Query: 37 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLL 216
P L V+D +H I EA+ + IPV A+ +T+S VD IP N + ++ L +
Sbjct: 158 PDALFVIDADHEHIAIKEANNLGIPVFAIVDTNSDPDGVDFVIPGNDDAIRAVTLYLGAV 217
Query: 217 AREV 228
A V
Sbjct: 218 AATV 221
>UniRef50_O78482 Cluster: Chloroplast 30S ribosomal protein S2; n=3;
Eukaryota|Rep: Chloroplast 30S ribosomal protein S2 -
Guillardia theta (Cryptomonas phi)
Length = 235
Score = 38.3 bits (85), Expect = 0.16
Identities = 20/65 (30%), Positives = 36/65 (55%)
Frame = +1
Query: 10 NQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSH 189
N I+ R P L++++D ++ + E + IP+I++ +T+ DIAIP N +
Sbjct: 148 NGIKNMKRLPDLVVIVDQKRETTAVQECRTLGIPIISILDTNCNPDLTDIAIPGNDDAIR 207
Query: 190 SIGLM 204
SI L+
Sbjct: 208 SIKLI 212
>UniRef50_Q6Q8T9 Cluster: Predicted 30S ribosomal protein S2; n=1;
uncultured marine gamma proteobacterium EBAC20E09|Rep:
Predicted 30S ribosomal protein S2 - uncultured marine
gamma proteobacterium EBAC20E09
Length = 277
Score = 37.9 bits (84), Expect = 0.21
Identities = 23/83 (27%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Frame = +1
Query: 37 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLL 216
P + V+D + + EA + IP+IAL +T+S +D+ IP N + SI L+ ++
Sbjct: 132 PDAIFVIDVKYEKIAVLEAKKMGIPIIALVDTNSDPDGIDMIIPGNDDAIRSIRLITKVI 191
Query: 217 ----AREVLRLRGVLPRTSAGML 273
AR + +G +P++ + ++
Sbjct: 192 SDACARGIESAQGFVPKSDSPII 214
>UniRef50_A7H716 Cluster: Ribosomal protein S2; n=5; Bacteria|Rep:
Ribosomal protein S2 - Anaeromyxobacter sp. Fw109-5
Length = 315
Score = 37.9 bits (84), Expect = 0.21
Identities = 21/75 (28%), Positives = 38/75 (50%)
Frame = +1
Query: 16 IQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSI 195
I+ R P + V+D ++H + EA+ + IPV+A+ +T+ ++ IP N + SI
Sbjct: 159 IKEMSRLPAAIFVIDTKKEHIAVHEANRLGIPVVAVVDTNCDPEGIEYVIPGNDDAIRSI 218
Query: 196 GLMWWLLAREVLRLR 240
L +A + R
Sbjct: 219 RLFTGKIAEACIEGR 233
>UniRef50_P66546 Cluster: 30S ribosomal protein S2; n=32; cellular
organisms|Rep: 30S ribosomal protein S2 - Xylella
fastidiosa
Length = 266
Score = 37.9 bits (84), Expect = 0.21
Identities = 23/78 (29%), Positives = 37/78 (47%)
Frame = +1
Query: 31 REPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWW 210
R P + V+D + I EA + IPV+A+ +T+ VD IP N + ++ L
Sbjct: 156 RIPDAIFVIDIGHEDIAIKEAKKLGIPVVAVVDTNYDPSLVDYPIPGNDDAIRAVQLYAR 215
Query: 211 LLAREVLRLRGVLPRTSA 264
A VL + +P +A
Sbjct: 216 AAADAVLEGKAAMPNAAA 233
>UniRef50_Q8M1D9 Cluster: Ribosomal protein S2; n=1;
Chaetosphaeridium globosum|Rep: Ribosomal protein S2 -
Chaetosphaeridium globosum
Length = 191
Score = 37.5 bits (83), Expect = 0.28
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +1
Query: 25 AFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRF-VDIAIPCNTKSSHSIGL 201
++ P LIV +P + I EA+ + IPV++L N++ P +D IP N S I L
Sbjct: 120 SYDRPSCLIVFNPCLNFTAIQEANTLGIPVVSLMNSNVPNHLKIDYPIPVNHNSISFIYL 179
Query: 202 MWWLLAR 222
L+ +
Sbjct: 180 FCNLIVK 186
>UniRef50_UPI0000DD86B9 Cluster: PREDICTED: similar to 40S ribosomal
protein SA (p40) (34/67 kDa laminin receptor); n=1; Homo
sapiens|Rep: PREDICTED: similar to 40S ribosomal protein
SA (p40) (34/67 kDa laminin receptor) - Homo sapiens
Length = 99
Score = 37.1 bits (82), Expect = 0.37
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = +1
Query: 4 FTNQIQAAFREPRLLIVLDPAQDH 75
FTNQIQAAF E + L+V DP DH
Sbjct: 66 FTNQIQAAFSELQFLVVTDPRADH 89
>UniRef50_Q39F43 Cluster: Ribosomal protein S2; n=11;
Proteobacteria|Rep: Ribosomal protein S2 - Burkholderia
sp. (strain 383) (Burkholderia cepacia (strain ATCC
17760/ NCIB 9086 / R18194))
Length = 246
Score = 37.1 bits (82), Expect = 0.37
Identities = 19/55 (34%), Positives = 30/55 (54%)
Frame = +1
Query: 37 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGL 201
P + V+D +TEA+ + +PVIA+ +T+ VD IP N SS ++ L
Sbjct: 157 PDAIFVVDVGYHKIAVTEANKLGVPVIAVVDTNHSPEGVDYVIPGNDDSSKAVAL 211
>UniRef50_A1ZN20 Cluster: Ribosomal protein S2; n=6;
Bacteroidetes/Chlorobi group|Rep: Ribosomal protein S2 -
Microscilla marina ATCC 23134
Length = 272
Score = 37.1 bits (82), Expect = 0.37
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = +1
Query: 31 REPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSI 195
R P L V+D ++H I EA + IPV A+ +T+S V +P N + SI
Sbjct: 156 RLPAALFVVDVKREHIAIAEAHKLGIPVFAMVDTNSNPGAVQFPVPANDDAFKSI 210
>UniRef50_Q6N5Q2 Cluster: 30S ribosomal protein S2; n=95;
Bacteria|Rep: 30S ribosomal protein S2 -
Rhodopseudomonas palustris
Length = 331
Score = 37.1 bits (82), Expect = 0.37
Identities = 20/65 (30%), Positives = 35/65 (53%)
Frame = +1
Query: 37 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLL 216
P L+ V+D ++ I EA + IPV A+ +T+ + + +P N + +I L L+
Sbjct: 160 PDLIFVIDTNKEDIAIQEAQRLGIPVAAIVDTNCDPKGITYLVPGNDDAGRAIALYCDLV 219
Query: 217 AREVL 231
AR V+
Sbjct: 220 ARAVI 224
>UniRef50_Q1MRE3 Cluster: Ribosomal protein S2; n=4; Bacteria|Rep:
Ribosomal protein S2 - Lawsonia intracellularis (strain
PHE/MN1-00)
Length = 291
Score = 36.7 bits (81), Expect = 0.49
Identities = 16/57 (28%), Positives = 33/57 (57%)
Frame = +1
Query: 31 REPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGL 201
R P+L+ ++DP +++ + E + IP++A+ +T+ +D IP N + +I L
Sbjct: 156 RLPQLIFIIDPHRENIAVKEGRKLGIPIMAVTDTNCDPDLIDYIIPGNDDAIRAIKL 212
>UniRef50_Q2UN92 Cluster: Mitochondrial/chloroplast ribosomal
protein S2; n=7; Eurotiomycetidae|Rep:
Mitochondrial/chloroplast ribosomal protein S2 -
Aspergillus oryzae
Length = 424
Score = 36.7 bits (81), Expect = 0.49
Identities = 19/63 (30%), Positives = 34/63 (53%)
Frame = +1
Query: 34 EPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWL 213
+P L++ L+P ++ + E N+P I + +TD+ V IP N S +IG++ +
Sbjct: 244 KPDLVVCLNPLENVVLLHECGLNNVPTIGVIDTDADPTRVTYPIPSNDDSMRAIGVIAGV 303
Query: 214 LAR 222
L R
Sbjct: 304 LGR 306
>UniRef50_P06354 Cluster: Chloroplast 30S ribosomal protein S2; n=2;
Embryophyta|Rep: Chloroplast 30S ribosomal protein S2 -
Marchantia polymorpha (Liverwort)
Length = 235
Score = 36.7 bits (81), Expect = 0.49
Identities = 21/67 (31%), Positives = 33/67 (49%)
Frame = +1
Query: 37 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLL 216
P ++I++D ++ I E + IP I L +TD DI IP N + SI W+L
Sbjct: 162 PDIVIIIDQQKEFTAIQECITLGIPTICLVDTDCDPDMTDIPIPANDDARASIR---WIL 218
Query: 217 AREVLRL 237
+ L +
Sbjct: 219 NKLTLAI 225
>UniRef50_A7Q681 Cluster: Chromosome undetermined scaffold_55, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_55, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 223
Score = 36.3 bits (80), Expect = 0.65
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +1
Query: 73 HQPITEASYVNIPVIALCNTDSPLRFVDIAI 165
+QPI E + N P+IA C+TDSP++ V + +
Sbjct: 141 YQPIKEVALGNTPIIAFCDTDSPMQCVALLL 171
>UniRef50_A5BWW8 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 208
Score = 36.3 bits (80), Expect = 0.65
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +1
Query: 73 HQPITEASYVNIPVIALCNTDSPLRFVDIAI 165
+QPI E + N P+IA C+TDSP++ V + +
Sbjct: 100 YQPIKEVALGNTPIIAFCDTDSPMQCVALLL 130
>UniRef50_Q0P3M3 Cluster: Rps2 protein; n=1; Ostreococcus tauri|Rep:
Rps2 protein - Ostreococcus tauri
Length = 226
Score = 35.9 bits (79), Expect = 0.86
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +1
Query: 37 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 204
P L++++ + + E +NIP I L +++ FV IP N S+ S+ +
Sbjct: 164 PDLVVIVGQPNERNAVLECQKLNIPTITLLDSNCDPTFVSYGIPANDDSARSVAFI 219
>UniRef50_P56797 Cluster: Chloroplast 30S ribosomal protein S2;
n=252; Streptophyta|Rep: Chloroplast 30S ribosomal
protein S2 - Arabidopsis thaliana (Mouse-ear cress)
Length = 236
Score = 35.9 bits (79), Expect = 0.86
Identities = 17/53 (32%), Positives = 30/53 (56%)
Frame = +1
Query: 37 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSI 195
P ++I+LD +++ + E + IP I+L +T+ DI+IP N + SI
Sbjct: 162 PDIVIILDQQEEYTALRECITLGIPTISLIDTNCNPDLADISIPANDDAIASI 214
>UniRef50_UPI00015531E2 Cluster: PREDICTED: similar to Ribosomal
protein SA; n=1; Mus musculus|Rep: PREDICTED: similar to
Ribosomal protein SA - Mus musculus
Length = 181
Score = 35.5 bits (78), Expect = 1.1
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +1
Query: 4 FTNQIQAAFREPRLLIVLDPAQDHQPITEASY 99
F N IQA F+ LL+V P + QP+TEAS+
Sbjct: 118 FINLIQATFQVTCLLVVTGPKMNQQPLTEASF 149
>UniRef50_A1AXW9 Cluster: Ribosomal protein S2; n=1; Candidatus
Ruthia magnifica str. Cm (Calyptogena magnifica)|Rep:
Ribosomal protein S2 - Ruthia magnifica subsp.
Calyptogena magnifica
Length = 312
Score = 35.5 bits (78), Expect = 1.1
Identities = 17/68 (25%), Positives = 34/68 (50%)
Frame = +1
Query: 37 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLL 216
P ++ V+D + + EA +++P+I + +T+ +D IP N S +IG +
Sbjct: 157 PDVIFVIDIGVEKNAVAEAKKLHLPIIGIVDTNHSPEGIDYVIPGNDDSIRAIGYYAREI 216
Query: 217 AREVLRLR 240
A +L +
Sbjct: 217 ANAILEAK 224
>UniRef50_A4R5S3 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 398
Score = 35.1 bits (77), Expect = 1.5
Identities = 18/62 (29%), Positives = 34/62 (54%)
Frame = +1
Query: 37 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLL 216
P L++VL+P +++ + E IP I + +T++ + V IP N S S+ ++ +L
Sbjct: 271 PDLVVVLNPLENNILLHECKVSQIPTIGVIDTNADVTKVTYPIPANDDSLRSMAVIAGVL 330
Query: 217 AR 222
R
Sbjct: 331 GR 332
>UniRef50_Q1V2V1 Cluster: Probable 30S ribosomal protein S2; n=2;
Candidatus Pelagibacter ubique|Rep: Probable 30S
ribosomal protein S2 - Candidatus Pelagibacter ubique
HTCC1002
Length = 273
Score = 34.7 bits (76), Expect = 2.0
Identities = 20/75 (26%), Positives = 36/75 (48%)
Frame = +1
Query: 37 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLL 216
P L+ ++D + I EAS + IP+ A+ +++S +D IP N + +I L L+
Sbjct: 159 PDLVFIIDTNYESLAIAEASKLGIPICAILDSNSNPDGIDYPIPGNDDARRAIDLYCNLV 218
Query: 217 AREVLRLRGVLPRTS 261
+ + P S
Sbjct: 219 KETIENAKKAAPSKS 233
>UniRef50_Q1K325 Cluster: Ribosomal protein S2; n=6; Bacteria|Rep:
Ribosomal protein S2 - Desulfuromonas acetoxidans DSM
684
Length = 256
Score = 34.7 bits (76), Expect = 2.0
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +1
Query: 16 IQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSI 195
I+ + P + V+DP ++ + EA + IPV+A+ +T+ +D IP N + +I
Sbjct: 151 IKGMTKLPGAMFVIDPKKEAIAVCEAKKLGIPVVAVVDTNCDPDEIDYIIPGNDDAIRAI 210
Query: 196 GL 201
L
Sbjct: 211 RL 212
>UniRef50_Q5KI10 Cluster: Ribosomal protein, putative; n=1;
Filobasidiella neoformans|Rep: Ribosomal protein,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 307
Score = 34.7 bits (76), Expect = 2.0
Identities = 17/57 (29%), Positives = 32/57 (56%)
Frame = +1
Query: 34 EPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 204
+P L+I L+ +++ I E + +IP + + +TD+ R V IP N +S + L+
Sbjct: 215 KPDLVIFLNASENTPAIRECTSRHIPTVGIVDTDTDPRLVTYPIPANMESMRTAELI 271
>UniRef50_P46741 Cluster: Mitochondrial ribosomal protein S2; n=1;
Prototheca wickerhamii|Rep: Mitochondrial ribosomal
protein S2 - Prototheca wickerhamii
Length = 274
Score = 34.7 bits (76), Expect = 2.0
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +1
Query: 31 REPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKS 183
++P ++ + +P + I EA+ + IPVI + S + IPCN S
Sbjct: 201 KKPDVIFIFNPGDNKNLILEANRLQIPVIGCTDMSSNTNGISYPIPCNNTS 251
>UniRef50_UPI00005A3143 Cluster: PREDICTED: similar to 40S ribosomal
protein SA (p40) (34/67 kDa laminin receptor); n=1;
Canis lupus familiaris|Rep: PREDICTED: similar to 40S
ribosomal protein SA (p40) (34/67 kDa laminin receptor)
- Canis familiaris
Length = 160
Score = 34.3 bits (75), Expect = 2.6
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = +1
Query: 4 FTNQIQAAFREPRLLIVLDPAQDHQ 78
F NQ QAA EPRLL+V P DHQ
Sbjct: 26 FANQTQAARWEPRLLMVTHPRADHQ 50
>UniRef50_UPI000023ED36 Cluster: hypothetical protein FG06308.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG06308.1 - Gibberella zeae PH-1
Length = 645
Score = 34.3 bits (75), Expect = 2.6
Identities = 16/62 (25%), Positives = 34/62 (54%)
Frame = +1
Query: 37 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLL 216
P L++ L+P +++ + E +IP I + +T++ +V IP N S ++ ++ +L
Sbjct: 262 PDLVVCLNPLENYTLLYECGLKSIPTIGVIDTNADPSWVTYTIPANDDSLRAMAVVGGVL 321
Query: 217 AR 222
R
Sbjct: 322 GR 323
>UniRef50_Q9GCB8 Cluster: Ribosomal protein S2; n=13;
Magnoliophyta|Rep: Ribosomal protein S2 - Zea mays
(Maize)
Length = 531
Score = 34.3 bits (75), Expect = 2.6
Identities = 34/133 (25%), Positives = 54/133 (40%), Gaps = 5/133 (3%)
Frame = +1
Query: 31 REPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSP--LRFVDIAIPCNTKSSHSIGLM 204
R+P +++L P + I EA IP++ L ++ P RF IP N + L
Sbjct: 122 RQPDCVVILHPDRKSSVILEADRSQIPIVYLVDSTIPSHKRFT-FTIPANDSLRLLVYLF 180
Query: 205 WWLLAREVLRLRGVL--PRTSA-GMLWXICSSTVTLKKVKRMNNKPRNRLWYQLNQK*LL 375
L+ + V + R + PR A G + T + K R + W +N+K
Sbjct: 181 CNLITKTVRQKRTAINGPRAGARGASTLLGIRTYSAASPKWKKKFFRFKNWIVMNRK-FF 239
Query: 376 LSMKTGMKHWSQW 414
L + W QW
Sbjct: 240 LMLLLPASCWLQW 252
>UniRef50_Q0U871 Cluster: Putative uncharacterized protein; n=2;
Pezizomycotina|Rep: Putative uncharacterized protein -
Phaeosphaeria nodorum (Septoria nodorum)
Length = 414
Score = 34.3 bits (75), Expect = 2.6
Identities = 17/62 (27%), Positives = 34/62 (54%)
Frame = +1
Query: 37 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLL 216
P L++ ++P +++ + E + NIP I + +T++ +V IP N S I ++ +L
Sbjct: 273 PDLVVCMNPLENYVLLHECALNNIPTIGVIDTNADPTWVTYPIPANDDSHRCIQVIAGVL 332
Query: 217 AR 222
R
Sbjct: 333 GR 334
>UniRef50_A6R797 Cluster: Putative uncharacterized protein; n=1;
Ajellomyces capsulatus NAm1|Rep: Putative
uncharacterized protein - Ajellomyces capsulatus NAm1
Length = 424
Score = 34.3 bits (75), Expect = 2.6
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 34 EPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWL 213
+P L++ L+P ++ + E IP I + +TD+ V IP N S S+ ++ +
Sbjct: 317 KPDLVVCLNPLENRPLLHECGLHVIPTIGIIDTDANPTHVTYPIPANDDSLRSVAVIAGV 376
Query: 214 LAR 222
L R
Sbjct: 377 LGR 379
>UniRef50_O21288 Cluster: Ribosomal protein S2; n=1; Reclinomonas
americana|Rep: Ribosomal protein S2 - Reclinomonas
americana
Length = 212
Score = 33.9 bits (74), Expect = 3.5
Identities = 19/75 (25%), Positives = 38/75 (50%)
Frame = +1
Query: 7 TNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSS 186
T I+ R P + ++ + EAS +NIP IA+ ++++ ++ + IP N S
Sbjct: 130 TQGIRNMERLPSAIFIVGVNNCRTALLEASKLNIPTIAIVDSNTSIQDITYPIPGNDDSI 189
Query: 187 HSIGLMWWLLAREVL 231
++ L L++ +L
Sbjct: 190 LAVNLYCQLISNAIL 204
>UniRef50_Q874M6 Cluster: SWI6; n=3; Saccharomycetales|Rep: SWI6 -
Kluyveromyces delphensis (Yeast)
Length = 808
Score = 33.9 bits (74), Expect = 3.5
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = -3
Query: 278 NHNIPALVRGSTPRSLSTSRANNHHIKPIEWEDLVLHGIA-MSTNLSGESVLHKAITGML 102
N NIPA G+TP TS AN +K +LV HG + M + GES L KA+ +
Sbjct: 334 NLNIPADEHGNTPLHWLTSIANIDLVK-----ELVKHGASRMLGDNIGESALVKAVKSVN 388
Query: 101 TYEA 90
Y+A
Sbjct: 389 NYDA 392
>UniRef50_P46753 Cluster: Mitochondrial ribosomal protein S2; n=1;
Acanthamoeba castellanii|Rep: Mitochondrial ribosomal
protein S2 - Acanthamoeba castellanii (Amoeba)
Length = 312
Score = 33.5 bits (73), Expect = 4.6
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = +1
Query: 37 PRLLIVLDPAQDHQPITEASYVNIPVIALCNT-DSPLRFVDIAIPCNTKSSHSIGLMWWL 213
P + V + +H I E+ +NIP IA+ ++ D+P V IP N+KS S+ + +
Sbjct: 123 PHSIFVPNIQNNHYVINESFIINIPSIAIVDSIDNPSN-VFFPIPGNSKSLKSLFFFYMV 181
Query: 214 LAREVLRLR 240
+A+ + R
Sbjct: 182 IAKSLFYSR 190
>UniRef50_Q02AL1 Cluster: Ribosomal protein S2; n=1; Solibacter
usitatus Ellin6076|Rep: Ribosomal protein S2 -
Solibacter usitatus (strain Ellin6076)
Length = 303
Score = 33.1 bits (72), Expect = 6.0
Identities = 21/70 (30%), Positives = 36/70 (51%)
Frame = +1
Query: 37 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLL 216
P +L V+D ++ + EA + IPV+A+ +T+ VD IP N + +I L +
Sbjct: 159 PDVLFVIDSNKEGIAVKEARRLGIPVVAIVDTNCDPDEVDWVIPGNDDALRAIRLFASKI 218
Query: 217 AREVLRLRGV 246
A V+ R +
Sbjct: 219 ADAVVEGRAL 228
>UniRef50_UPI0000DB6E6C Cluster: PREDICTED: similar to Cdk5
activator-like protein CG5387-PA; n=3; Coelomata|Rep:
PREDICTED: similar to Cdk5 activator-like protein
CG5387-PA - Apis mellifera
Length = 1376
Score = 32.7 bits (71), Expect = 8.0
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = -2
Query: 321 HPFHFLQGHGRRTNXPQHPSAGPGKHTTKPQHFTCQQPPHQTNRV 187
+P H G + P +PS PG + P H T Q P HQ V
Sbjct: 145 NPGHQAHNPGHQGQNPANPSQNPGHQSANPGHQT-QNPGHQPQNV 188
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 615,173,700
Number of Sequences: 1657284
Number of extensions: 11654682
Number of successful extensions: 32582
Number of sequences better than 10.0: 109
Number of HSP's better than 10.0 without gapping: 31178
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32544
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49586781480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -